NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F059316

Metagenome / Metatranscriptome Family F059316

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F059316
Family Type Metagenome / Metatranscriptome
Number of Sequences 134
Average Sequence Length 75 residues
Representative Sequence VTSTRETDAGEGLAAAGLPAGEVKAWLQAEPGETTDFPADREKFSEYWRTSARLLGRLPLKPRRNASEHAAA
Number of Associated Samples 114
Number of Associated Scaffolds 134

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 50.00 %
% of genes near scaffold ends (potentially truncated) 98.51 %
% of genes from short scaffolds (< 2000 bps) 94.03 %
Associated GOLD sequencing projects 111
AlphaFold2 3D model prediction Yes
3D model pTM-score0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (57.463 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(22.388 % of family members)
Environment Ontology (ENVO) Unclassified
(26.866 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(43.284 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.
1FACEORA_438270
2Ga0066672_103273562
3Ga0066388_1000988661
4Ga0066388_1054393801
5Ga0066388_1083731541
6Ga0070714_1004650811
7Ga0070714_1021358422
8Ga0070707_1003844352
9Ga0070698_1008606641
10Ga0066704_102406911
11Ga0066708_103382672
12Ga0066905_1014177302
13Ga0066905_1014911181
14Ga0066903_1035070892
15Ga0066903_1077751581
16Ga0066903_1084708971
17Ga0075018_100416943
18Ga0074059_110264281
19Ga0074057_119926861
20Ga0074057_121789882
21Ga0079222_113778641
22Ga0075425_1003691031
23Ga0075434_1006326751
24Ga0075426_102636361
25Ga0075435_1015516001
26Ga0075418_115412822
27Ga0066709_1035805241
28Ga0066709_1046225881
29Ga0099792_110477772
30Ga0105237_103361662
31Ga0105249_131133972
32Ga0126374_111089421
33Ga0126380_106700061
34Ga0126384_113976971
35Ga0126382_107989572
36Ga0126382_109421732
37Ga0126370_103086692
38Ga0126370_112351221
39Ga0126372_108542032
40Ga0126377_106105801
41Ga0126377_129597241
42Ga0126379_101868363
43Ga0126379_118986901
44Ga0105246_111512081
45Ga0137389_105482181
46Ga0137389_115223761
47Ga0137388_116651112
48Ga0137364_102312961
49Ga0137383_108915341
50Ga0137362_112994041
51Ga0137362_114555721
52Ga0137366_100975101
53Ga0137375_101390871
54Ga0137361_114363941
55Ga0137358_100253445
56Ga0137398_108101832
57Ga0137359_104208952
58Ga0137359_117627802
59Ga0137413_110616771
60Ga0137416_110686202
61Ga0137407_101467513
62Ga0137407_121665621
63Ga0126375_107490761
64Ga0164300_109564651
65Ga0164303_114539882
66Ga0164301_100280854
67Ga0164308_115970931
68Ga0164307_114338922
69Ga0164305_121604181
70Ga0157375_136448872
71Ga0137412_107586092
72Ga0137412_111220901
73Ga0182036_111237032
74Ga0182041_111845922
75Ga0182037_107259642
76Ga0182038_118114192
77Ga0173482_107703512
78Ga0193703_10055823
79Ga0193693_10335721
80Ga0179592_103200611
81Ga0210380_102831142
82Ga0210406_109361072
83Ga0193699_101281231
84Ga0207653_101596312
85Ga0207699_101385963
86Ga0207668_117009271
87Ga0207675_1014912942
88Ga0257156_10686031
89Ga0209180_106161951
90Ga0209813_102592622
91Ga0307321_10697122
92Ga0307295_101464171
93Ga0307285_100984652
94Ga0307301_102738182
95Ga0307317_101968671
96Ga0307315_101361552
97Ga0307316_100173301
98Ga0307278_104740781
99Ga0307304_103496881
100Ga0307304_103750262
101Ga0318534_102038671
102Ga0318538_106286242
103Ga0318572_103042932
104Ga0318526_103466201
105Ga0318521_100463324
106Ga0318546_108747972
107Ga0318508_11269572
108Ga0318508_11785221
109Ga0318552_105265502
110Ga0318548_102072631
111Ga0318550_104917982
112Ga0318565_105596442
113Ga0318497_101117361
114Ga0318567_107427591
115Ga0318511_101120021
116Ga0318527_103671771
117Ga0318495_101809332
118Ga0318520_103406702
119Ga0318520_107691071
120Ga0306923_107699661
121Ga0310910_113766702
122Ga0318531_101955701
123Ga0306922_119625202
124Ga0318506_100825292
125Ga0318575_104741341
126Ga0318510_105529121
127Ga0318513_104279551
128Ga0318514_106537411
129Ga0310890_118203841
130Ga0306924_108977162
131Ga0318518_105542392
132Ga0306920_1017509791
133Ga0318519_100723723
134Ga0247830_112995252
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 47.00%    β-sheet: 0.00%    Coil/Unstructured: 53.00%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

10203040506070VTSTRETDAGEGLAAAGLPAGEVKAWLQAEPGETTDFPADREKFSEYWRTSARLLGRLPLKPRRNASEHAAASequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.59
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
42.5%57.5%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Groundwater Sediment
Watersheds
Soil
Soil
Vadose Zone Soil
Tropical Forest Soil
Agricultural Soil
Soil
Grasslands Soil
Soil
Soil
Soil
Tropical Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Agricultural Soil
Switchgrass Rhizosphere
Populus Endosphere
Populus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
14.9%3.0%17.2%9.7%22.4%6.0%6.0%3.0%3.7%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
FACEORA_4382702032320005SoilMAVTFARTTDAADCLAAAGLATADIAAWLRAEPRELTDFPADCATFSEYWRRSAQLLGR
Ga0066672_1032735623300005167SoilVTSTRETDAGECLVAAELPAGEVKGWLQAEPGETIDFPADREKFSGYWRTSARLLGRLPLKPRRNASEHAAAHAI
Ga0066388_10009886613300005332Tropical Forest SoilMTTTAPASDAAAVERLAAAGLPVGEVRDWLQAEPGETTDFPADRRKFSGYWERSTRLLGRLPPKPRR
Ga0066388_10543938013300005332Tropical Forest SoilMRETDASECLAAAGLPAGEVKAWLQAEPGETTDFPADREKFSGYWRTSARLLGRLPLKPRRNASEHAAAQAIQDAAR
Ga0066388_10837315413300005332Tropical Forest SoilVSSAVTTEINSTECLAGAGLPASEVKAWLQAEPGETTDFPADREKFSGYWRTSARLIGRLPPKARRNASEQAAATVIQD
Ga0070714_10046508113300005435Agricultural SoilVTSTRETDAGECLAAAELPAGEVKGWLQAEPGETTDFPADREKFSGYWRTSGRLLGRLPLKPRRNASEHAA
Ga0070714_10213584223300005435Agricultural SoilVTTAIDRKDRLAAAGLPAADVEAWLRAEPRELTDFSADCATFSDYWRRSAQLLGRLPDKPRRNASEHAAA
Ga0070707_10038443523300005468Corn, Switchgrass And Miscanthus RhizosphereVTSTRETDAGEYLAAAGLPAGEVKAWLQAEPGETTDFPADREKFSGYWRTSARLLGRLPLKPRRNASEHAAAQAIQDA
Ga0070698_10086066413300005471Corn, Switchgrass And Miscanthus RhizosphereVTSTRETDAGEYLAAAGLPAGEVKAWLQAEPGETTDFPADREKFSGYWRTSARLLGRLPLKPRRNASEHAA
Ga0066704_1024069113300005557SoilVTRTRETDAGEGLAAAGLPAGEVKGWLQAEPGETIDFPADREKFSGYWRTSARLLGRLPLKP
Ga0066708_1033826723300005576SoilVTFARATDAADCLAAAGLPAADVNAWLRMEPDEVADFPADREKFSAYWGKSARLLGRLPQKSH
Ga0066905_10141773023300005713Tropical Forest SoilVTSAGETGASERLAAAGLPVGEVKAWLQAEPGETTDFSADREKFSNYWRTSARLVGRLPPKARRSASEQAAATAIQDAARD
Ga0066905_10149111813300005713Tropical Forest SoilVSSAVTTEINATECLAAAGLPASEVKAWLQAEPGETTDFPADREKFSGYWRTSARLIGRLPPKARRNASEQAA
Ga0066903_10350708923300005764Tropical Forest SoilVTTEIDRTDCLAAAGLATADIAAWLRAEPRELTDFPADCATFSDYWRRSARLLGRLPHKPRRNASEHAAAALIQDRSREAR
Ga0066903_10777515813300005764Tropical Forest SoilVTFARATDAADCLAAAGLPAAEVNAWLRMEPDEVADFPADCATFSEYWRRSTQLLGRLPHKPRRNASEHAAAAL
Ga0066903_10847089713300005764Tropical Forest SoilVSSAVTTEINATECLAAAGLPASEVKAWLQAEPGETTDFPTDREKFSEYWRTSARLLGRLPQKARRNASEHAAATA
Ga0075018_1004169433300006172WatershedsMNARETDTTDCLVAAGVALGDVKAWLQAEPGEAIEFSADRTKFSEYWARSARLFGRLPQKPRRSAS
Ga0074059_1102642813300006578SoilMIARETDAAAVECLATAGLTAGDVRDWLQAEPGETTDFPADRRKFSTYWQKASRLLGRLPHKPRRNEGEHVSVFGR
Ga0074057_1199268613300006605SoilMIARETDAAAVERLATAGLSAGDVRDWLQAEPGETTDFPADRRKFSTYWQKTSRLLGRLPHKPRRSESEHAAARTIQERAREA
Ga0074057_1217898823300006605SoilMPARETDPVAVECLVTAGLPAKDVRDWLQAEPGETTDFPADRRKFSAYWQKGSRLLGRLPPKPRRNEGEGAAARTIQ
Ga0079222_1137786413300006755Agricultural SoilVTTEIDRTDCLAAAGLATADIAAWLRAEPRELTDFAADCATFSEYWRRSAQLLGRLPHKPRRNASEHAAAALIQDRS
Ga0075425_10036910313300006854Populus RhizosphereMAVTFARTTDAADCLAAAGLATADIAAWLRAEPRELTDFPADCATFSEYWRRSAQLLG
Ga0075434_10063267513300006871Populus RhizosphereVTSTRETDAGEGLAAAGLPAGEVKAWLQAEPGETTDFPADREKFSEYWRTSARLLGRLPLKPRRNASEHAAAQAIQDAARN
Ga0075426_1026363613300006903Populus RhizosphereLVSLSAVTTEIDRTDCLAAAGLPAADIESWLGAEPREITDFSADCATFSDYWRRSAQLLGRLPDKPRRNASEHAA
Ga0075435_10155160013300007076Populus RhizosphereMSASESDTTAVERLAAAGLPATEVRDWLQSQPRDTGDFAADRKTFSAYWDKAARLLARLPQKPRRNA
Ga0075418_1154128223300009100Populus RhizosphereVTTEIDRTDCLAAAGLPAADIESWLGAEPREITDFSADCATFSDYWRRSEQLLGRLPDKPRRNASEHAA
Ga0066709_10358052413300009137Grasslands SoilVTTARAIDPTQRLTAAGLAAGDVEAWLQTEPGEAVEFSADRTKFSDYWAKSARLFGRLPQKPRRNASEHAAAELIQEKAREAR
Ga0066709_10462258813300009137Grasslands SoilVNTKTNTTDRLTAAGLAAGDVEAWLQTEPGEAIEFSADRTKFSDYWARSARLFGRLPQKPRRNASEHA
Ga0099792_1104777723300009143Vadose Zone SoilVTSTRETDAGECLAAAGLPAGEVKAWLQAEPGETTDFPADREKFSDYWRTSARLLGRLPLKPRRNASEHAAAQAIQDAARNA
Ga0105237_1033616623300009545Corn RhizosphereMPARETDPVAVECLVTAGLPAKDVRDWLQAEPGETTDYPADRRKFSAYWQKGSRLLGRLPPKPQRNEGEHAAARTIQERAREARA
Ga0105249_1311339723300009553Switchgrass RhizosphereLVSLSAVTTEIDRTDCLAAAGLPAADIESWLGAEPREITDFSADCATFSDYWRRSAQLLGRLPDKQRRNASE
Ga0126374_1110894213300009792Tropical Forest SoilMTTTAPASDAAAVERLAAAGLPVGEVRDWLQAEPGETTDFPADRRKFSGYWERSTRLLGRLPPKPRRNAAEQGAAGIIQERAR
Ga0126380_1067000613300010043Tropical Forest SoilVTSARQTGASECLAAAGLPASEVRAWLQAEPGETTDFPADREKFSGYWRTSARLIGRLPPKARRNASEQAAATVIQ
Ga0126384_1139769713300010046Tropical Forest SoilVTTEINATECLGAAGLPASEVKAWLQAEPGETTDFPTDREKFSEYWRTSARLLGRLPQKARRNASEHAAATAIQDAARDA
Ga0126382_1079895723300010047Tropical Forest SoilVTSARETGASECLAAAGLPASEVKAWLQAEPGETTDFPADREKFSGYWRTSARLIGRLPPKARRNASEQAAATVIQ
Ga0126382_1094217323300010047Tropical Forest SoilVDTNIVATERLTAAGLPASDVKAWLQAEPGEATEFSADRTKFSQYWAMSARLFGRLPQKPRRAASERAAAELIQGRARDA
Ga0126370_1030866923300010358Tropical Forest SoilVTTEINATECLAAAGLPASEVKAWLQAEPGETTDFPTDREKFSEYWRTSARLLGRLPQKARRNASEHAAATAIQ
Ga0126370_1123512213300010358Tropical Forest SoilMSARASDAAAVERLAAAGLPGAGIREWLQAEPGETTDFPADRRKFSSYWQKSSRLLGQLPPKPRRNEGEQA
Ga0126372_1085420323300010360Tropical Forest SoilMSMTASASDAAAVERLAGAGLPVGDVRDWLQAEPGETTDFPADRRKFSTYWEKSARLVGRFPRKPRRNAA
Ga0126377_1061058013300010362Tropical Forest SoilVTSDIDRTDLLAAAGLAAADVEAWLRAKPRELTDFAADCATFSEYWRRSAQLLGRLPHKPRRNASEHAAAA
Ga0126377_1295972413300010362Tropical Forest SoilVTSARETGASECLAAAGLPASEVKAWLQAEPGETTDFPADREKFSGYWRTSARLIGRLPPKARRNASEQAAATVIQDAAR
Ga0126379_1018683633300010366Tropical Forest SoilVTFARATDAADCLAAAGLPAADVNAWLRMEPDEVADFPADREKFSAYWGKSARLLGRLPQKSHR
Ga0126379_1189869013300010366Tropical Forest SoilMTARETTDAAAVEYLAAAGLPAREVRDWLQAEPGETTDFPNDRKRFSAYWQKSSRLLGRLPSKPHRGAAEIGAA
Ga0105246_1115120813300011119Miscanthus RhizosphereMPARETDPVAVECLVTAGLPAKDVRDWLQAEPGETTDFPADRRKFSAYWQKGSRLLGRLPPKPQRNEGEHAAARTIQERARE
Ga0137389_1054821813300012096Vadose Zone SoilMSAAATAGETTALERLAAAGLASGEARDWLQEEPGETTDFPADCRKFSAYWQRSARLRAQLPPKPRRNAAEHAADL
Ga0137389_1152237613300012096Vadose Zone SoilVTSTRETDAGEGLAAAGLPAGEVKGWLQAEPGETTDFPADRRKFSSYWEKSARLVGRVPPKARRKEGEHA
Ga0137388_1166511123300012189Vadose Zone SoilVTSTRETDAGECLAAAGLPAGEVKAWLQAEPGETADFPADREKFSGYWRTSARLLGRLPLKPRRNA
Ga0137364_1023129613300012198Vadose Zone SoilVTFARTIDATDCLAAAGLAAADVDAWLRAEPGEAADFAADRERFAAYWLASARLLGRLPH
Ga0137383_1089153413300012199Vadose Zone SoilMMTARAGHATECLPAAGLAAGDVKDWLQAEPGEITDFTGDRKKFSDYWQKSARLLGRLPVKPRRNET
Ga0137362_1129940413300012205Vadose Zone SoilMNARETDTTDCLVAAGVALGDVKAWLQAEPGEAIEFSADRTKFSEYWARSARLFGRLPQKPRRSASEHAAAELIQERARDA
Ga0137362_1145557213300012205Vadose Zone SoilVHTEIDVTNALTSAGLPADDVKAWLQAEPGEAIEFSADRPKFSEYWARSARLFGRLPQKPRRSASEHAAAELIQERARDA
Ga0137366_1009751013300012354Vadose Zone SoilVTFARTIDATDCLAAAGLPAADVDAWLRTEPGEAADFAADRARFSAYWQASARLLGRLPHKPGRKAREHAA
Ga0137375_1013908713300012360Vadose Zone SoilVTSARESDASECLAAAGLPASEVKAWLQAEPGEATDFPADRETFSSYWRASARLIGRLPPKPRRNASEQAAATAIQDAA
Ga0137361_1143639413300012362Vadose Zone SoilMNARETDTTDCLVAAGVALGDVKAWLQAEPSEAIEFSADRTKFSEYWARSARLFGRLPQKPRRSASEHAAAELIQERARDA
Ga0137358_1002534453300012582Vadose Zone SoilVTSTRETDAGECLAAAGLPAGEVKAWLQAEPGETADFPADREKFSGYWRTSARLLGRLPLKPRRNASEHAAAQAI
Ga0137398_1081018323300012683Vadose Zone SoilMSAREADSTAVERLVAAGLPAPEVRDWLQAEPGETTDFPADRRKFSGYWEKSARLIGRLPLKPRRNEGEQAAA
Ga0137359_1042089523300012923Vadose Zone SoilVTSTRETDAGECLAAAGLPAGEVKAWLQAEPGETADFPADREKFSGYWRTSARLLGRLPLKPRRNASEHAAAQAIQ
Ga0137359_1176278023300012923Vadose Zone SoilVTTAGETGASELLAAAGLPAGEVKGWLQAEPGETIDFPADREKFSGYWRTSARLLGRLPLRPRRNASEHAAAH
Ga0137413_1106167713300012924Vadose Zone SoilMIARETDAGAVECLATAGLSAGDVRDWLQSEPGETTDFPADRRKFSTYGQKASRLLGRLPHKPLRCEGEHAA
Ga0137416_1106862023300012927Vadose Zone SoilMTARDTDATAVEHAMAVERLAAAGLPVGEVREWLQAKPGETTDYAADREKFSSYWQKAARLIGRLPPKPRRNEGEHV
Ga0137407_1014675133300012930Vadose Zone SoilVTSARTIDATDCLAAAGLAAADVEAWLRAEPGEAADFPADREKFSAYWRASARLLGRLPHKPRRNAREH
Ga0137407_1216656213300012930Vadose Zone SoilMTARDTDATAVEHAMAVERLAAAGLPVGEVREWLQAKPGETTDYAADREKFSSYWQKAARLVGRLPPKSKRNDAEQAAASILQERARETRVS
Ga0126375_1074907613300012948Tropical Forest SoilVTTEVNASECLAAAGLPAGEVKAWLQAEPGETTDFPADREKFSDYWRTSARLLGRLPPKPRRNASEHAAAQAIQDAARNARARFL
Ga0164300_1095646513300012951SoilMPARETDPVAVECLVTAGLPAKDVRDWLQAEPGETTDYPADRRKFSAYWQKGARLLGRLPPKPQRSEGER
Ga0164303_1145398823300012957SoilVTFARTIDAADCLAAAGLPTADVNAWLETEPDEVADFPADREKFSAYWGKSARLLGRLPQKPYRSPSE
Ga0164301_1002808543300012960SoilVTTEIDRTDCLAAAGLPAADIESSLVAEPREITDFSADCDTFSDYWRRSAQLLGRLPDKPRRNASEHAAAALIQDRSREARARFLR
Ga0164308_1159709313300012985SoilMTTRETDASAVECLATAGLPAGDVRDWLQAEPGETTDFPADRRKFSAYWQKASRLLGRLPHKLRRNAGEHAAARTIQERA
Ga0164307_1143389223300012987SoilVTSTRETDAGERLAAAGLPAGEVKAWLQTEPGETIDFPADREKFSGYWRTSARLLGRLPLKPRRNASEHAAAQAIQDAA
Ga0164305_1216041813300012989SoilMNARETDTTDCLVAAGLALGDVKAWLQAEPGEAIEFSADRPKFSGYWARSARLFGRLPQKPRRSASEHAAAELI
Ga0157375_1364488723300013308Miscanthus RhizosphereMTTRETDASAVECLATAGLPAGDVRDWLQAEPGETTDFPADRRKFAAYWQNASRLLGRLPPKPRRNAGEHAAART
Ga0137412_1075860923300015242Vadose Zone SoilMTARETTDAAAVEYLAAAGLPAREVRDWLQAEPGETTDFPNDRKKFSAYWQRSSRLLGRLPPKPRRNAAEAAAGSRR*
Ga0137412_1112209013300015242Vadose Zone SoilVTSTRETDAGECLAAAGLPAGEVKAWLQAEPGETTDFPADREKFSGYWRTSARLLGRLPLKPRRNASEHA
Ga0182036_1112370323300016270SoilVRTEINSTECLAAAGLPAGEVKAWLQAEPGETTDFPADREKFSGHWRTSARLIGRLPPKPRRTASEHAAAQA
Ga0182041_1118459223300016294SoilVISIRETDASECLAAAGLPAGEVKAWLQAEPGETTDFPADREKFSGYWRTSARLLGRLPLKPRRNASEHAAAQAIQDAAR
Ga0182037_1072596423300016404SoilVSGPVRTEINSTECLAAAGLPAGEVKAWLQAEPGETTDFPADREKFSGYWRSSARLLGRLPLKPRRNASEHAAAHAIQDAARNARMRFLRR
Ga0182038_1181141923300016445SoilVSGPVRTEINSTECLAAAGLPAGEVKAWLQAEPGETTDFPADREKFSGYWRTSARLIGRLPPKPRRTASEHAAAQAIQDAARNA
Ga0173482_1077035123300019361SoilMTVRETDASAVECLATAGLPAGGVRDWLQAEPGETTDFPADRRKFSAYWQKASRLLGRLPHKLRRNAGEHAAARTIQERAREAR
Ga0193703_100558233300019876SoilMPARETDPVAVECLVTAGLPAKDVRDWLQAEPGETTDFPADRRKFSAYWQKGSRLLGRLPPKPRRNEGEGAAARTIQDR
Ga0193693_103357213300019996SoilMIAREADAGAVECLATAGLSAGDVRDWLQAEPGETTDFPADRRKFSTYWQKASRLLGRLPHKPRRSEGEHAAARTIQERA
Ga0179592_1032006113300020199Vadose Zone SoilVTFARTIDAADCLAAAGLPTADVNAWLETEPDEVADFPADREKFSAYWGKSARLLGRLPQKPYRSPSERASAGL
Ga0210380_1028311423300021082Groundwater SedimentMIARETDAAAVECLATAGLSAGDVRDWLQAEPGETTDFPADRRKFSTYWQKASRLLGRLPHKPRRSEGEH
Ga0210406_1093610723300021168SoilVTFARTIDAADCLAAAGLPTADVNAWLETEPDEVADFPADREKFSAYWGKSARLL
Ga0193699_1012812313300021363SoilMTARETDAGAVECLATAGLPAGDVRDWLQAEPGETTDFPADRRKFSAYWQKASRLLGRLPHKPRRKEGEHAAARTIQER
Ga0207653_1015963123300025885Corn, Switchgrass And Miscanthus RhizosphereVTSTRETDAGEYLAAAGLPAGEVKAWLQAEPGETTDFPADREKFSGYWRTSGRLLGRLPLKPRRNASEHAAAQA
Ga0207699_1013859633300025906Corn, Switchgrass And Miscanthus RhizosphereLVSLSAVTTEIDRTDCLAAAGLPAADIESWLGAEPREITDFSADCATFSDYWRRSAQLLGRLPDKPRRNASEHAAAALIQDRSREARA
Ga0207668_1170092713300025972Switchgrass RhizosphereMPARETDPVAVECLVTAGLPAKDVRDWLQAEPGETTDFPADRRKFSAYWQKGSRLLGRLPPKPRRNEGEGAAARTIQDRAREAR
Ga0207675_10149129423300026118Switchgrass RhizosphereMTTRETDASAVECLATAGLPAGDVRDWLQAEPGETTDFPADRRKFSAYWQKASRLLGRLPHKLRRNAG
Ga0257156_106860313300026498SoilVTSTRETDAGECLAAAGLPAGEVKAWLQAEPGETADFPADREKFSGYWRTSARLLGRLPLKPRRNASEHAAAQA
Ga0209180_1061619513300027846Vadose Zone SoilMSGSALMTARETDATAVERLAAAGLPANEVRDWLQAEPGETTDFPADRKKFASYWQKSARLVGRLPRKARRSEAEQAAARTVQE
Ga0209813_1025926223300027866Populus EndosphereMPARETDPVAVECLVTAGLPAKEVRDWLQAEPGETTDYPADRRKFSAYWQKGARLLGRLPPKPRRNEGEGAAARTIQER
Ga0307321_106971223300028704SoilMPARETDPVAVECLVTAGLPAKDVRDWLQAEPGETTDFPADRRKFSAYWQKGSRLLGRLPPKPRRNEGEGAAA
Ga0307295_1014641713300028708SoilMIARETDAAAVECLATAGLSAGDVRDWLQAEPGETTDFPADRRKFSTYWQKASRLLGRLPHKPRRNESEHAAARTIQER
Ga0307285_1009846523300028712SoilMIARETDAAAVECLATAGLSAGDVRDWLQAEPGETTDFPADRRKFSTYWQKASRLLGRLPHKPRRSEGEHAAAR
Ga0307301_1027381823300028719SoilMIARETDAGAVECLATAGLSAGDVRDWLQAEPGETTDFPADRRKFSTYWQKASRLLGRLPHKPRRNESEH
Ga0307317_1019686713300028720SoilMSAREADSTAVERLVAAGLPAPEVRDWLQAEPGETTDFPADRKKFSGYWEKSARLIGRLPLKPRRNEGEQAAARMLQDRARDARVCFLRRHGDAVYD
Ga0307315_1013615523300028721SoilMIARETDAGAVECLATAGLFAGDVRDWLQAEPGETTDFPADRRKFSTYWQKASRLLGRLPHKPRRSEG
Ga0307316_1001733013300028755SoilMIARETDAAAVECLATAGLSAGDVRDWLQAEPGETTDFPADRRKFSTYWQKASRLLGRLPHKPRRNESEHAAARTIQERAREAR
Ga0307278_1047407813300028878SoilVSCAVTFARTINATDCLAAAGLPAADVDAWLRTEPGEATDFAANRARFSAYWQISARLLGRLPQKPRRNAREDA
Ga0307304_1034968813300028885SoilMPARETDPVAVECLVTAGLPAKDVRDWLQAEPGETTDFPADRRKFSAYWQKGSRLLGRLPPKPRRNEGEGAAART
Ga0307304_1037502623300028885SoilVTTAIDRTDCLAAAGLPAADIEAWLRAEPRELTDFSADCPTFSDYWRRSAQLLGRLPDKPRRNASEHAAAALIQDRSR
Ga0318534_1020386713300031544SoilVTSTRETDAGEGLAAAGLPAGEVKAWLQAEPGETIDFPADREKFSEYWRTSARLLGRLPLKPRRNASEHAAAQAIQDAARITSSSTRTKRDRRTVNAS
Ga0318538_1062862423300031546SoilVTTEINSTECLAAAGLPAGEVKAWLQAEPGETTDFPADRERFSEYWRTSARLLGRLPPQPRRTVSE
Ga0318572_1030429323300031681SoilVSSAVTTEINSTECLAAAGLPAGEVKAWLQAEPGETTDFPADRERFSEYWRTSARLLGRLPLKPRRNASEHAAVQA
Ga0318526_1034662013300031769SoilVTTEINSTECLAAAGLPAGEVKAWLQAEPGETTDFPADRERFSEYWRTSARLLGRLPPQPRRTVSEHAAAHAIQDAAR
Ga0318521_1004633243300031770SoilVTSTRETDAGEGLAAAGLPAGEVKAWLQAEPGETTDFPADREKFSEYWRTSARLLGRLPLKPRRNASEHAAAHAIQDAARNARVL
Ga0318546_1087479723300031771SoilVSRAVRTESNPIECLAAAGLPASEVKAWLQAEPGETTDFPADREKFSGYWRTSARLIGRLPPKARRNASEQAAATVIQAAARDARV
Ga0318508_112695723300031780SoilVTSTRETDAGEGLAAAGLPAGEVKAWLQAEPGETIDFPADREKFSEYWRTSARLLGRLPLKPRRNASEHAAAQAIQDAAC
Ga0318508_117852213300031780SoilVSGPVRTEINSTECLAAAGLPASEVKAWLQAEPGETTDFPTDREKFSEYWRTSARLLGRLPQKARRNASEH
Ga0318552_1052655023300031782SoilVTTEINSTECLAAAGLPAGEVKAWLQAEPGETTDFPADRERFSEYWRTSARLLGRLPPQPRRTVSEHAAAHAIQD
Ga0318548_1020726313300031793SoilVISIRETDASECLAAAGLPAGEVKAWLQAEPGETTDFPADREKFSGYWRTSARLLGRLPLKPRRNASEHAAAQAIQDAARSARMRFL
Ga0318550_1049179823300031797SoilVRTEINSTECLAAAGLPAGEVKAWLQAEPGETTDFPADREKFSGHWRTSARLIGRLPPKPRRTASEHAAAQAIQDAARNAR
Ga0318565_1055964423300031799SoilVSSAVTTEINSTECLAAAGLPAGEVKAWLQAEPGETTDFPADRERFSEYWRTSARLLGRLPLKPRRNASEHAAVH
Ga0318497_1011173613300031805SoilVTTEINSTECLAAAGLPAGEVKAWLQAEPGETTDFPADRERFSEYWRTSARLLGRLPLKPRRNASEHAAVQAIQDAARITSSST
Ga0318567_1074275913300031821SoilVTTEINSTECLAAAGLPAGEVKAWLQAEPGETTDFPADRERFSEYWRTSARLLGRLPPQPRRTVS
Ga0318511_1011200213300031845SoilVTSTRETDAGEGLAAAGLPAGEVKAWLQAEPGETTDFPADREKFSGYWRTSARLIGRLPLKPRRNASEHAAAHAIQD
Ga0318527_1036717713300031859SoilVTTEINSTECLAAAGLPAGEVKAWLQAEPGETTDFPADRERFSEYWRTSARLLGRLPPQPRRTVSEHAAAHAIQDAARNARVR
Ga0318495_1018093323300031860SoilVSRAVRTESNPIECLAAAGLPASEVKAWLQAEPGETTDFPADREKFSGYWRTSARLIGRLPPKARCNASEQAAATVIQDAA
Ga0318520_1034067023300031897SoilVTSTRETDAGEGLAAAGLPAGEVKAWLQAEPGETTDFPADREKFSEYWRTSARLLGRLPLKPRRNASEHAAA
Ga0318520_1076910713300031897SoilVTTEINSTECLAAAGLPAGEVKAWLQAEPGETTDFPADRERFSEYWRTSARLLGRLPPQPRRTVSEHAA
Ga0306923_1076996613300031910SoilVSGPVRTEINSTECLAAAGLPAGEVKAWLQAEPGETTDFPADREKFSGYWRTSARLIGRLPPKPRRTASEHAAAQAIQDAARNARARFLR
Ga0310910_1137667023300031946SoilVTSAHETGASERLVAAGLPAGEVKAWLQAEPGETTDFPADREKFSDYWRTSARLLGRLPLKPRRNT
Ga0318531_1019557013300031981SoilVTTAGETGASELLAAAGLPAGEVKAWLQAEPGETTDFPADREKFSEYWRTSARLLGRLPLKPRRNASEHAAAH
Ga0306922_1196252023300032001SoilVSSVVTTDINSTECLAAAGLPAGEVKAWLQAELGETTDFPADREKFSGYWRTSARLLGRLPLKPRRNASEQAAAQAIQD
Ga0318506_1008252923300032052SoilVTSTRETDAGEGLAAAGLPAGEVKAWLQAEPGETIDFPADREKFSEYWRTSARLLGRLPLKPRRNASEHAAA
Ga0318575_1047413413300032055SoilVTTEINSTECLAAAGLPAGEVKAWLQAEPGETTDFPADRERFSEYWRTSARLLGRLPPQPRRTVSEHAAAHAIQDAARRV
Ga0318510_1055291213300032064SoilVTSIRETDASECLAAAGLPAGEVKAWLQAEPGETTDFPADREKFSGYWRTSARLLGRLPLKPRRAR
Ga0318513_1042795513300032065SoilVSGPVRTEINSTECLAAAGLPAGEVKAWLQAEPGETTDFPADREKFSGYWRTSARLIGRLPPKPRRTASEHAAAQAIQDAACSLAVR
Ga0318514_1065374113300032066SoilVTTAGETGASELLAAAGLPAGEVKAWLQAEPGETTDFPADREKFSEYWRTSARLLGRLPLKPRRNAS
Ga0310890_1182038413300032075SoilMPARETDPVAVECLVTAGLPAKDVRDWLQAEPGETTDFPADRRKFSAYWQKGARLLGRLPPKPQRNEAEGAAA
Ga0306924_1089771623300032076SoilVRTEINSTECLAAAGLPAGEVKAWLQAEPGETTDFPADREKFSGHWRTSARLIGRLPPKPRRTASEHAAAQAIQDAARNARARFLR
Ga0318518_1055423923300032090SoilVTTEINSTECLAAAGLPAGEVKAWLQAEPGETTDFPADRERFSEYWRTSARLLGRLPPRGIPLN
Ga0306920_10175097913300032261SoilMSAGETDATAVERLVAAGLPAPEVRDWLQAEPGETTDFPADRKKFGSYWEKSARLVGRLPLKARRKEAEQAAAHILQE
Ga0318519_1007237233300033290SoilVRTEINSTECLAAAGLPAGEVKAWLQAEPGETTDFPADREKFSGHWRTSARLIGRLPPKPRRTASEHAAA
Ga0247830_1129952523300033551SoilMPARETDPVAVECLVTVGLPAKDVRDWLQAEPGETTDFPADRRKFSAYWQKGSRLLGRLPPKPQRTEGE


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.