NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F059313

Metagenome / Metatranscriptome Family F059313

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F059313
Family Type Metagenome / Metatranscriptome
Number of Sequences 134
Average Sequence Length 107 residues
Representative Sequence MLLDPVLWLFVLSVGLLVVGVLGVVVATRRARLSERQGVPGVSPDVGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLGRLAVLLDQADRAAARAPTSRATR
Number of Associated Samples 121
Number of Associated Scaffolds 134

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 18.66 %
% of genes near scaffold ends (potentially truncated) 41.79 %
% of genes from short scaffolds (< 2000 bps) 68.66 %
Associated GOLD sequencing projects 114
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (77.612 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere
(11.940 % of family members)
Environment Ontology (ENVO) Unclassified
(29.851 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(42.537 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 76.19%    β-sheet: 0.00%    Coil/Unstructured: 23.81%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 134 Family Scaffolds
PF11716MDMPI_N 23.88
PF08020DUF1706 17.91
PF12697Abhydrolase_6 11.94
PF01035DNA_binding_1 8.21
PF01182Glucosamine_iso 4.48
PF01966HD 1.49
PF00460Flg_bb_rod 1.49
PF00296Bac_luciferase 1.49
PF14833NAD_binding_11 1.49
PF02668TauD 1.49
PF13291ACT_4 0.75
PF01177Asp_Glu_race 0.75
PF12867DinB_2 0.75
PF12695Abhydrolase_5 0.75
PF01799Fer2_2 0.75
PF00903Glyoxalase 0.75

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 134 Family Scaffolds
COG4283Uncharacterized conserved protein DfsB/IRC4, DUF1706 (PF08020) domainGeneral function prediction only [R] 17.91
COG0350DNA repair enzyme Ada (O6-methylguanine-DNA--protein-cysteine methyltransferase)Replication, recombination and repair [L] 8.21
COG3695Alkylated DNA nucleotide flippase Atl1, participates in nucleotide excision repair, Ada-like DNA-binding domainTranscription [K] 8.21
COG03636-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminaseCarbohydrate transport and metabolism [G] 4.48
COG1256Flagellar hook-associated protein FlgKCell motility [N] 1.49
COG1558Flagellar basal body rod protein FlgCCell motility [N] 1.49
COG1749Flagellar hook protein FlgECell motility [N] 1.49
COG1815Flagellar basal body rod protein FlgBCell motility [N] 1.49
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 1.49
COG2175Taurine dioxygenase, alpha-ketoglutarate-dependentSecondary metabolites biosynthesis, transport and catabolism [Q] 1.49
COG4786Flagellar basal body rod protein FlgGCell motility [N] 1.49
COG4787Flagellar basal body rod protein FlgFCell motility [N] 1.49


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms77.61 %
UnclassifiedrootN/A22.39 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2088090015|GPICI_9103295All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1001Open in IMG/M
2228664021|ICCgaii200_c0860880All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1048Open in IMG/M
3300003324|soilH2_10077319All Organisms → cellular organisms → Bacteria9678Open in IMG/M
3300004157|Ga0062590_100022778All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2989Open in IMG/M
3300004463|Ga0063356_100367803All Organisms → cellular organisms → Bacteria1829Open in IMG/M
3300005174|Ga0066680_10157505All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1423Open in IMG/M
3300005331|Ga0070670_100002280All Organisms → cellular organisms → Bacteria15795Open in IMG/M
3300005341|Ga0070691_10075268All Organisms → cellular organisms → Bacteria1644Open in IMG/M
3300005345|Ga0070692_10003051All Organisms → cellular organisms → Bacteria6690Open in IMG/M
3300005354|Ga0070675_100130764All Organisms → cellular organisms → Bacteria2139Open in IMG/M
3300005406|Ga0070703_10040856Not Available1444Open in IMG/M
3300005434|Ga0070709_10642559All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium821Open in IMG/M
3300005440|Ga0070705_100389112Not Available1029Open in IMG/M
3300005467|Ga0070706_100008187All Organisms → cellular organisms → Bacteria9754Open in IMG/M
3300005468|Ga0070707_100168054All Organisms → cellular organisms → Bacteria → Proteobacteria2137Open in IMG/M
3300005468|Ga0070707_101121881All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium752Open in IMG/M
3300005471|Ga0070698_100094114All Organisms → cellular organisms → Bacteria → Proteobacteria2975Open in IMG/M
3300005529|Ga0070741_10000972All Organisms → cellular organisms → Bacteria94014Open in IMG/M
3300005546|Ga0070696_101053639All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium682Open in IMG/M
3300005557|Ga0066704_10579028All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium726Open in IMG/M
3300005834|Ga0068851_10410185All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium798Open in IMG/M
3300005875|Ga0075293_1014393All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium946Open in IMG/M
3300005879|Ga0075295_1010748All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium957Open in IMG/M
3300005888|Ga0075289_1094943All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → Azorhizobium doebereinerae503Open in IMG/M
3300006050|Ga0075028_100090173All Organisms → cellular organisms → Bacteria1547Open in IMG/M
3300006172|Ga0075018_10081319All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1407Open in IMG/M
3300006173|Ga0070716_100011562All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria4446Open in IMG/M
3300006175|Ga0070712_100307263Not Available1285Open in IMG/M
3300006755|Ga0079222_10758146Not Available782Open in IMG/M
3300006804|Ga0079221_10069099All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales1644Open in IMG/M
3300006806|Ga0079220_10039803Not Available2148Open in IMG/M
3300006806|Ga0079220_10206630All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1139Open in IMG/M
3300006806|Ga0079220_11497047Not Available579Open in IMG/M
3300006854|Ga0075425_101256238All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium840Open in IMG/M
3300006903|Ga0075426_10009239All Organisms → cellular organisms → Bacteria → Proteobacteria7021Open in IMG/M
3300006903|Ga0075426_10533303All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium873Open in IMG/M
3300006914|Ga0075436_100455934All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium931Open in IMG/M
3300006954|Ga0079219_10018014All Organisms → cellular organisms → Bacteria2552Open in IMG/M
3300009038|Ga0099829_11014600Not Available688Open in IMG/M
3300009088|Ga0099830_10292623All Organisms → cellular organisms → Bacteria1298Open in IMG/M
3300009143|Ga0099792_10094534All Organisms → cellular organisms → Bacteria1557Open in IMG/M
3300009147|Ga0114129_10322466All Organisms → cellular organisms → Bacteria2053Open in IMG/M
3300009148|Ga0105243_10753275All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium955Open in IMG/M
3300009162|Ga0075423_10006348All Organisms → cellular organisms → Bacteria → Proteobacteria11101Open in IMG/M
3300010362|Ga0126377_11124396All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium855Open in IMG/M
3300010400|Ga0134122_11566870All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium681Open in IMG/M
3300010400|Ga0134122_12732680Not Available546Open in IMG/M
3300010401|Ga0134121_10494334All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1125Open in IMG/M
3300010403|Ga0134123_10008769All Organisms → cellular organisms → Bacteria6813Open in IMG/M
3300012096|Ga0137389_10494737Not Available1048Open in IMG/M
3300012202|Ga0137363_11183333Not Available650Open in IMG/M
3300012202|Ga0137363_11520579All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium561Open in IMG/M
3300012361|Ga0137360_11427684Not Available595Open in IMG/M
3300012362|Ga0137361_10433743All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1207Open in IMG/M
3300012363|Ga0137390_10055172All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3864Open in IMG/M
3300012582|Ga0137358_10075167All Organisms → cellular organisms → Bacteria2271Open in IMG/M
3300012931|Ga0153915_10509550All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1376Open in IMG/M
3300012958|Ga0164299_10016301All Organisms → cellular organisms → Bacteria2928Open in IMG/M
3300012961|Ga0164302_10019986All Organisms → cellular organisms → Bacteria2877Open in IMG/M
3300012984|Ga0164309_11811780All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium523Open in IMG/M
3300013297|Ga0157378_11675214All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium683Open in IMG/M
3300014745|Ga0157377_10111501Not Available1645Open in IMG/M
3300015371|Ga0132258_10370534All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3548Open in IMG/M
3300015372|Ga0132256_101049266All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium930Open in IMG/M
3300017927|Ga0187824_10137978Not Available803Open in IMG/M
3300017930|Ga0187825_10325200All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium577Open in IMG/M
3300017936|Ga0187821_10055850All Organisms → cellular organisms → Bacteria1419Open in IMG/M
3300017994|Ga0187822_10010496All Organisms → cellular organisms → Bacteria → Proteobacteria2208Open in IMG/M
3300019881|Ga0193707_1024725All Organisms → cellular organisms → Bacteria1979Open in IMG/M
3300020002|Ga0193730_1098308All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium817Open in IMG/M
3300020010|Ga0193749_1039035Not Available919Open in IMG/M
3300020022|Ga0193733_1093515All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium841Open in IMG/M
3300020070|Ga0206356_10359937Not Available810Open in IMG/M
3300020082|Ga0206353_10967114Not Available966Open in IMG/M
3300020199|Ga0179592_10489564Not Available528Open in IMG/M
3300020579|Ga0210407_10326154All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1200Open in IMG/M
3300020581|Ga0210399_11344708Not Available561Open in IMG/M
3300021088|Ga0210404_10027426All Organisms → cellular organisms → Bacteria2516Open in IMG/M
3300021170|Ga0210400_10086866All Organisms → cellular organisms → Bacteria2463Open in IMG/M
3300021445|Ga0182009_10553229Not Available611Open in IMG/M
3300021479|Ga0210410_10187613All Organisms → cellular organisms → Bacteria → Proteobacteria1850Open in IMG/M
3300022525|Ga0242656_1072760All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium633Open in IMG/M
3300025315|Ga0207697_10500942Not Available536Open in IMG/M
3300025321|Ga0207656_10351678All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium736Open in IMG/M
3300025901|Ga0207688_10016392All Organisms → cellular organisms → Bacteria → Proteobacteria4019Open in IMG/M
3300025904|Ga0207647_10196613All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1167Open in IMG/M
3300025905|Ga0207685_10828063All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium511Open in IMG/M
3300025910|Ga0207684_10014462All Organisms → cellular organisms → Bacteria6803Open in IMG/M
3300025910|Ga0207684_10271390All Organisms → cellular organisms → Bacteria1463Open in IMG/M
3300025920|Ga0207649_10072672All Organisms → cellular organisms → Bacteria2201Open in IMG/M
3300025922|Ga0207646_10018812All Organisms → cellular organisms → Bacteria6435Open in IMG/M
3300025925|Ga0207650_10043976All Organisms → cellular organisms → Bacteria3281Open in IMG/M
3300025933|Ga0207706_10000345All Organisms → cellular organisms → Bacteria → Proteobacteria50186Open in IMG/M
3300025935|Ga0207709_10288615All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1215Open in IMG/M
3300025944|Ga0207661_10033961All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3963Open in IMG/M
3300025945|Ga0207679_10000896All Organisms → cellular organisms → Bacteria19003Open in IMG/M
3300025986|Ga0207658_11289876Not Available668Open in IMG/M
3300026285|Ga0209438_1166122Not Available580Open in IMG/M
3300026340|Ga0257162_1036337All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium612Open in IMG/M
3300026354|Ga0257180_1009748All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1133Open in IMG/M
3300026371|Ga0257179_1011116All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium944Open in IMG/M
3300026481|Ga0257155_1008763All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1321Open in IMG/M
3300026496|Ga0257157_1004346All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD00172134Open in IMG/M
3300026496|Ga0257157_1092155All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium528Open in IMG/M
3300026514|Ga0257168_1000053All Organisms → cellular organisms → Bacteria → Proteobacteria6336Open in IMG/M
3300026551|Ga0209648_10010928All Organisms → cellular organisms → Bacteria → Proteobacteria7877Open in IMG/M
3300027775|Ga0209177_10000669All Organisms → cellular organisms → Bacteria5494Open in IMG/M
3300027894|Ga0209068_10006863All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales5364Open in IMG/M
3300028047|Ga0209526_10163006All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1558Open in IMG/M
3300028047|Ga0209526_10293342All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1102Open in IMG/M
3300028381|Ga0268264_10122542All Organisms → cellular organisms → Bacteria2293Open in IMG/M
3300028799|Ga0307284_10151824Not Available894Open in IMG/M
3300028885|Ga0307304_10363292All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium649Open in IMG/M
3300028889|Ga0247827_10537489All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium738Open in IMG/M
3300030336|Ga0247826_10336407All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1095Open in IMG/M
(restricted) 3300031150|Ga0255311_1016053All Organisms → cellular organisms → Bacteria → Proteobacteria1526Open in IMG/M
(restricted) 3300031197|Ga0255310_10018695Not Available1785Open in IMG/M
3300031720|Ga0307469_10336658All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1260Open in IMG/M
3300031720|Ga0307469_10895243Not Available821Open in IMG/M
3300031820|Ga0307473_10905378Not Available637Open in IMG/M
3300031944|Ga0310884_10377430Not Available810Open in IMG/M
3300031962|Ga0307479_10096190All Organisms → cellular organisms → Bacteria → Proteobacteria2875Open in IMG/M
3300032174|Ga0307470_10391332Not Available979Open in IMG/M
3300032174|Ga0307470_10700711All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium772Open in IMG/M
3300032174|Ga0307470_11424130All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium573Open in IMG/M
3300032180|Ga0307471_100272592All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1761Open in IMG/M
3300032205|Ga0307472_101133937All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium742Open in IMG/M
3300032829|Ga0335070_11047102All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium752Open in IMG/M
3300033432|Ga0326729_1001635All Organisms → cellular organisms → Bacteria → Proteobacteria4749Open in IMG/M
3300033433|Ga0326726_10003519All Organisms → cellular organisms → Bacteria → Proteobacteria14371Open in IMG/M
3300033480|Ga0316620_11782425Not Available611Open in IMG/M
3300033513|Ga0316628_100225835All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2272Open in IMG/M
3300033513|Ga0316628_100602738All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1431Open in IMG/M
3300034819|Ga0373958_0116787Not Available641Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere11.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil9.70%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil8.21%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil6.72%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil6.72%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil5.22%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.48%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment2.99%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.99%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.99%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil2.99%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds2.24%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil2.24%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil2.24%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.24%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.24%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.24%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere1.49%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.49%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.49%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil1.49%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil1.49%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere1.49%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.49%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.49%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.75%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.75%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.75%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.75%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.75%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.75%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.75%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.75%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.75%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.75%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil0.75%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.75%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.75%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2088090015Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
2228664021Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300003324Sugarcane bulk soil Sample H2EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005406Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaGEnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005834Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2Host-AssociatedOpen in IMG/M
3300005875Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_101EnvironmentalOpen in IMG/M
3300005879Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_301EnvironmentalOpen in IMG/M
3300005888Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103EnvironmentalOpen in IMG/M
3300006050Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014EnvironmentalOpen in IMG/M
3300006172Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012931Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300017927Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4EnvironmentalOpen in IMG/M
3300017930Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5EnvironmentalOpen in IMG/M
3300017936Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1EnvironmentalOpen in IMG/M
3300017994Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2EnvironmentalOpen in IMG/M
3300019881Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2EnvironmentalOpen in IMG/M
3300020002Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1EnvironmentalOpen in IMG/M
3300020010Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2EnvironmentalOpen in IMG/M
3300020022Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2EnvironmentalOpen in IMG/M
3300020070Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020082Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020199Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021445Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaGEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300022525Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025315Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)Host-AssociatedOpen in IMG/M
3300025321Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025904Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026285Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026340Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-AEnvironmentalOpen in IMG/M
3300026354Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-BEnvironmentalOpen in IMG/M
3300026371Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-BEnvironmentalOpen in IMG/M
3300026481Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-AEnvironmentalOpen in IMG/M
3300026496Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-AEnvironmentalOpen in IMG/M
3300026514Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-BEnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300027775Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)EnvironmentalOpen in IMG/M
3300027894Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028799Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123EnvironmentalOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M
3300028889Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2EnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300031150 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4EnvironmentalOpen in IMG/M
3300031197 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031944Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032829Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3EnvironmentalOpen in IMG/M
3300033432Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF6AY SIP fractionEnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300033480Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_BEnvironmentalOpen in IMG/M
3300033513Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_CEnvironmentalOpen in IMG/M
3300034819Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
GPICI_029927902088090015SoilMLLDPVLWVFVLAAALLVVAVVGVVIATRQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAXERDEMEAVLNRLAVLLERADRAVQGAPTSRLTR
ICCgaii200_086088012228664021SoilGGSRLAPARGSGETALRAPAGGRLFAMLLDPVLWVFVLAAALLVVAVVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGAPTSRLTR
soilH2_1007731963300003324Sugarcane Root And Bulk SoilMLLDPVLWLFVLATALLAAAVAGIVIATRRARQGEPLELPGLVPADQSSEFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLDRADRAVPGASASRLTH*
Ga0062590_10002277833300004157SoilMLLDPVLWVFVLAAALLVVAVVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGAPTSRLTR*
Ga0063356_10036780343300004463Arabidopsis Thaliana RhizosphereGSRLAPARGSGETALRAPAGGRLFAMLLDPVLWVFVLAAALLVVAVVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGAPTSRLTR*
Ga0066680_1015750523300005174SoilMLLDPVLWLFVLSVGLLVVGVLGVVVATRRARQSERQGVPGMSPDLGSDFARIHELQTQVKQLGDEYDRLAAERDELQAVLARLAVLLEQANRAAAVAPSSRAPS*
Ga0070670_10000228063300005331Switchgrass RhizosphereMLLDPVLWVFVLAAALLVVAVVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGVPTSRLTR*
Ga0070691_1007526813300005341Corn, Switchgrass And Miscanthus RhizosphereMLLDPVFWLFVLSVGLLVVGVLGVVVATRRARQSERLGVPGVSPDVGSDFARIHELQTQVKRLGDEYDRLLVERDELEAVLTRLAALLEQADRAAAGLAASAPQPAGRLTRVTR*
Ga0070692_1000305113300005345Corn, Switchgrass And Miscanthus RhizosphereGSRLAPARGSGETALRAPAGGRLFAMLLDPVLWVFVLAAALLVVAVVGVVIATRRACQGQPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGAPTSRLTR*
Ga0070675_10013076423300005354Miscanthus RhizosphereMLLDPVLWVFVLAAALLVVAVVGVVIATRRARQGEPLELPGLVPADQSSDFTRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGAPTSRLTR*
Ga0070703_1004085623300005406Corn, Switchgrass And Miscanthus RhizosphereMLMDPVLWLFVLSVGLLVAGVLGVVVATRRARQSERQGVPGVSSDLGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLGRLAVLLDQADRAAARAPTSRATR*
Ga0070709_1064255923300005434Corn, Switchgrass And Miscanthus RhizosphereGAPRPPATGRTMAPGPARGRLFAMLLDPVLWLFVLSVGLLVVGVLGVVVATRRARRGERLGLPGIAPDLGSDFARIHELNTEVKRLGDECDRLLAERDELEAVLNRLAVLLERADRAAAGIPTSHGR*
Ga0070705_10038911223300005440Corn, Switchgrass And Miscanthus RhizosphereMLMDPVLWLFVLSVGLLVAGVLGVVVATRRARQSERQGVPGVSSDLGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLGRLAVLLDQADRAAARA
Ga0070706_10000818723300005467Corn, Switchgrass And Miscanthus RhizosphereMLLDPVLWLFVLSVGLLVVGVLGVVVATRRARRGERLGLPGIAPELGSDFARIHELNTEVKRLGDECDRLLAERAELEAVLNRLAVLLERADRAAAGIPTSHGR*
Ga0070707_10016805433300005468Corn, Switchgrass And Miscanthus RhizosphereMLLDPVLWLFVLSVGLLVVGVLGVVVATRRARQSERQGVPGVSPDLGSDFARIHELQTQVKQLGDEYDRLAAERDELQAVLARLAVLLEQANRAAAVAPSSRAPS*
Ga0070707_10112188113300005468Corn, Switchgrass And Miscanthus RhizosphereDPVLWLFVLSVGLLVAGVLGVVVATRRARQSERQGVPGVSSDLGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLGRLAVLLDQADRAAARAPTSRATR*
Ga0070698_10009411433300005471Corn, Switchgrass And Miscanthus RhizosphereMLMDPVLWLFVLSVGLLVAGVLGVVVATRRARQSERQGVPGVSSDLGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLGRLAVLLDQADRAAAPTSRATR*
Ga0070741_10000972663300005529Surface SoilMLTDPVLWLFVLAAALLAAAVAGVVIATRRARQGEPLELPGLVPAEQSSDFARLHELRSEVKRLGDECDRLAAERDELEAVLNRLSVLLDRADRTVPHPPASRLTRR*
Ga0070696_10105363913300005546Corn, Switchgrass And Miscanthus RhizosphereMLLDPVLWLFVLSVGLLVAGVLGVVVATRRARQSERQGVPGVSSDLGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLGRLAVLLDQADRAAARAPTSRATR*
Ga0066704_1057902823300005557SoilGVLGVVVATRRARQSERQGVPGVSPDLGSDFARIHELQTQVKQLGDEYDRLAAERDELQAVLARLAVLLEQANRAAAVAPSSRAPS*
Ga0068851_1041018523300005834Corn RhizosphereMLLDPVLWVFVLAAALLVVAVVGVVIATRRACQGQPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGAPTSRLTR*
Ga0075293_101439323300005875Rice Paddy SoilMLADPIFWLFVLSVGLLVVGVLGVVVATRRARQSERLGLPGVSPDLGSDFARIHELQTQVKRLGDEYDRLLAERDELEAVLTRLAALLEQADHAAGGLAASAATHAGRATRVTR*
Ga0075295_101074823300005879Rice Paddy SoilMLLDPVFWLFVLSVGLLVVGVLGVVVATRRARQSERPGLPGSSPDLGSDFARIHELQTQVKRLGDDYDRLLAERDELEAVLTRLAALLEQADHAAGGLAASAATHAGRATRVTR*
Ga0075289_109494313300005888Rice Paddy SoilPRGRLCAMLLDPVFWLFVLSVGLLVVGVLGVVVATRRARQSERLGLPGVSPDLGSDFARIHELQTQVKRLGDEYDRLLAERDELEAVLTRLGVLLEQADRAAAGLAASAPQPAGRVTRVTR*
Ga0075028_10009017343300006050WatershedsVLSVGLLVVGVLGVVVATRRARQSERMGVPGVTPDVGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLARLAVLLEQVDRAAAGAPTSRAAR*
Ga0075018_1008131933300006172WatershedsMLLLDPVLWLFVLSVGLLVVGVLGVVVATRRARQSERMGVPGVTPDVGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLARLAVLLEQVDRAAAGAPTSRAAR*
Ga0070716_10001156263300006173Corn, Switchgrass And Miscanthus RhizosphereLPAATGAPRPPATGRTMAPGPARGRLFAMLLDPVLWLFVLSVGLLVVGVLGVVVATRRARRGERLGLPGIAPDLGSDFARIHELNTEVKRLGDECDRLLAERAELEAVLNRLAVLLERADRAAAGIPTSHGR*
Ga0070712_10030726323300006175Corn, Switchgrass And Miscanthus RhizosphereMLLDPVLWLFVLSVGLLVVGVLGVVVATRRARRGERLGLPGIAPDLGSDFARIHELNTEVKRLGDECDRLLAERAELEAVLNRLAVLLERADRAAAGIPTSHGR*
Ga0079222_1075814623300006755Agricultural SoilMLLDPVLWLFVLSVGLLVVGVLGVVVATRRARRGERLGLPGIAPDLGSDFARIHELKTEVKRLGDECDRLVAERDELEVVLNRLAVLLERADRAAACIPTSHRR*
Ga0079221_1006909933300006804Agricultural SoilMLLDPVLWVFVLAAALLVVAGVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGAPTSRLTR
Ga0079220_1003980333300006806Agricultural SoilMLLDPVLWLFVLATALLAAAVAGIVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGAPTSRLTR*
Ga0079220_1020663023300006806Agricultural SoilMLLDPVLWLFVLSVGLLVVGVLGVVVATRRARRGERLGLPGIAPDLGSDFARIHELKTEVKRLGDECNRLVAERDELEVVLNRLAVLLERADRAAAGIPTSHRR*
Ga0079220_1149704713300006806Agricultural SoilMLLDPVFWLFALSSVLLLVGVLGVVVATRRARRSEQLGLPGVSPDLGSDFVRIHELQTQVKRLGDEYDRLLAERDELEAVLTRLAGLLEQADRAAAGLAASAPPPAGHRATR
Ga0075425_10125623823300006854Populus RhizosphereLWLFVLSVGLLVVGVLGVVVATRRARRGERLGLPGIEPDLGSDFARIHELNTEVKRLGDECDRLLAERDELEAVLNRLAVLLERADRAAAGIPASHGR*
Ga0075426_1000923913300006903Populus RhizosphereDPVLWLFVLSVGLLVVGVLGVVVATRRARRGERLGLPGIAPDLGSDFARIHELKTEVKRLGDECDRLVAERDELEVVLNRLAVLLERADRAAAGIPTSHRR*
Ga0075426_1053330313300006903Populus RhizosphereDPVLWLFVLSVGLLVVGVLGVVVATRRARRGERLGLPGIEPDLGSDFARIHELNTEVKRLGDECDRLLAERDELEAVLNRLAVLLERADRAAAGIPASHGR*
Ga0075436_10045593413300006914Populus RhizosphereARGRLFAMLLDPVLWLFVLSVGLLVVGVLGVVVATRRARRGERLGLPGIAPDLGSDFARIHELKTEVKRLGDECDRLVAERDELEVVLNRLAVLLERADRAAAGIPTSHRR*
Ga0079219_1001801433300006954Agricultural SoilMLLDPVLWVFVLAAALLVVAGVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVPGAPTSRLTR*
Ga0099829_1101460023300009038Vadose Zone SoilMLMDPVLWLFVLSVGLLVAGVLGVVVATRRARQSERQGVPGVSSDLGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLGRLAVLLDQADRAAARAPT
Ga0099830_1029262333300009088Vadose Zone SoilMLLDPVLWLFVLSVGLLVVGVLGVVVATRRARQSERQGVPGVSPALGSDFARIHELQTQVKQLGDEYDRLAAERDELQAVLARLAVLLEQANRAAAVAPSSRAPR*
Ga0099792_1009453433300009143Vadose Zone SoilMLVDPVLWLFVLSVGLLVVGVLGVVVATRRARQSERQGVPGVSPALGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLARLAVLLEQANRAAAVAPTSRAPR*
Ga0114129_1032246633300009147Populus RhizosphereMLLDPVLWLFVLSVGLLVVGVLGVVVATRRARRGERLGLPGIAPDLGSDFARIHELKTEVKRLGDECDRLVAERDELEVVLNRLAVLLERADRAAAGIPTSHRR*
Ga0105243_1075327533300009148Miscanthus RhizosphereLWVFVLAAALLVVAVVGVVIATRRACQGQPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGAPTSRLTR*
Ga0075423_1000634863300009162Populus RhizosphereMLLDPVLWLFVLSVGLLVVGVLGVVVATRRARRGERLGLPGIAPDLGSDFARIHELKTEVKRLGDECDRLVAERDELEVVLNRLAVLLERADRAAAGIPTSQRR*
Ga0126377_1112439623300010362Tropical Forest SoilMLLDPVLWLFALATILLGVAVAGVVIATRRARQGEPLELPGMVPADPSSDFSRLHELRTEVKRLGDECDRLGAERDELEAVLNRLSVMLERADRAVHPPASRLSP*
Ga0134122_1156687023300010400Terrestrial SoilLDPVLWLFVLSVGLLVVGVLGVVVATRRARRSEQQGVPGVTPDLGSDFARIHELQTQVKRLDDEYDRLVAERDELEAVLVRFAVLLEQADRAAAPASRATR*
Ga0134122_1273268013300010400Terrestrial SoilMLTDPVLWLFVLSVGLLVAGVLGVVVATRRARQSERQGVPGVTPGLGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLARLAVLLEQADRAAAGAPASRA
Ga0134121_1049433413300010401Terrestrial SoilMLLDPVLWLFVLSVGLLVVGLLGVVVATRRARLSERQGVPGVSPDVGSDFARIHELQTQVKQLGDEYSRLAAERDELEAVLARLAVLLEQADRAAPGASTSRAAR*
Ga0134123_1000876973300010403Terrestrial SoilRLAPARGSGETALRAPAGGRLFAMLLDPVLWVFVLAAALLVVAVVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGAPTSRLTR*
Ga0137389_1049473713300012096Vadose Zone SoilMLMDPVLWLFVLSVGLLVAGVLGVVVATRRARQSERQGVPGVSSDLGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLDRRAVLLDQADRAAARAPTARATR*
Ga0137363_1118333323300012202Vadose Zone SoilMLLDPVLWLFVLSVGLLVVGVLGVVVATRRARQSERQGVPGVSPDLGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLARLAVLLEQANRAAAVA
Ga0137363_1152057923300012202Vadose Zone SoilFVLSVGLLVAGVLGVVVATRRARQSERQGVPGVSSDLGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLGRLAVLLDQADRAAARAPTSRATR*
Ga0137360_1142768413300012361Vadose Zone SoilMLVDPVLWLFVLSVGLLVVGVLGVVVATRRARQSERQGVPGVSPDLGSDFARIHELQTQVKQLGDEYDRLAAERDELQAVLARLAVLLEQANRAAAVAPSSRAPS*
Ga0137361_1043374323300012362Vadose Zone SoilMLLDPVLWLFVLSVGLLVVGVLGVVVATRRARQSERQGVPGVSPDLGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLARLAVLLEQANRAAAVAPSSRAPS*
Ga0137390_1005517243300012363Vadose Zone SoilMLLDPVLWLFVLSVGLLVVGVLGVVVATRRARQSERQGVPGVSPALGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLARLAVLLEQANRAAAVAPTSRAPR*
Ga0137358_1007516743300012582Vadose Zone SoilMLTDPVLWLFVLSVGLLVAGVLGVVVATRRARQSERQGVPGVSSDLGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLGRLAVLLDQADRAAARAPTSRATR*
Ga0153915_1050955023300012931Freshwater WetlandsMLLDPVFWLFVLSVALLVIGVLGVVVAARRARRNERLGVPGMSPDLGSDFARIHELQTQVKRLGDEYDRLLAERDELETVLTRLAVLLEQADRAAAGLPTSTPEHAGRTTR*
Ga0164299_1001630113300012958SoilMLLDPVLWVFVLAAALLVVAVVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADR
Ga0164302_1001998633300012961SoilMLLDPVLWVFVLAAALLVVAVVGGVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGAPTSRLTR*
Ga0164309_1181178023300012984SoilAAALLVVAVVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGAPTSRLTR*
Ga0157378_1167521423300013297Miscanthus RhizosphereVVAVVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGAPTSRLTR*
Ga0157377_1011150133300014745Miscanthus RhizosphereMLLGPVLWVFVLAAALLVVAVVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRAEVKRLGDECDRLVAERDEMESVLNRLAVLLERADRAVQGAPTSRLTR*
Ga0132258_1037053443300015371Arabidopsis RhizosphereMLLDPVFWLFVLSAGLLVVGVLGVVVATRRARRSEQLSLPGMSPDLGSDFARIHELQTQVKHLGDEYDRLLAERDELEAVLTRLAGLLEQADRAAAGLGGSAADRAGHRVTR*
Ga0132256_10104926623300015372Arabidopsis RhizosphereMLLDPVLWVFVLAAALLVVAGVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGAPTSRLTR*
Ga0187824_1013797813300017927Freshwater SedimentMLLDPVFWLFVLSVGLLLVGVLGVVVATRRARKSEQLGLPGVSPDLGSDFVRIHELQTQVKRLGDEYDRLLAERDELEAVLTRLAGLLEQADRAAAGLAASAPPPAGHRATR
Ga0187825_1032520013300017930Freshwater SedimentSVGLLLVGVLGVVVATRRARKSEQLGLPGVSPDLGSDFVRIHELQTQVKRLGDEYDRLLAERGELEAVLTRLAGLLEQADRAGAGLAASAPPHAGHRTTR
Ga0187821_1005585023300017936Freshwater SedimentMLLDPVFWLFALSSVLLLVGVLGVVVATRRARRSEQLGIPGVSPDLGSDFVRIHELQTQVKRLGDEYDRLLAERDELEAVLTRLAGLLEQADRAAAGLAASAPPPAGHRATR
Ga0187822_1001049643300017994Freshwater SedimentMLLDPVFWLFVLSVGLLLVGVLGVVVATRRARKSEQLGLPGVSPDLGSDFVRIHELQTQVKRLGDEYDRLLAERGELEAVLTRLAGLLEQADRAAAGLAASAPPPAGHRATR
Ga0193707_102472523300019881SoilMLLDPVLWLFVLSVGLLVVGVLGVVVATRRARLSERQGVPGVSPDVGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLARLAVLLEQADRTAAGTSTSRAAR
Ga0193730_109830813300020002SoilKLLDLARGRLFAMLLDPVLWLFVLSVGLLVVGVLGVVVATRRARLSERQGVPGVSPDVGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLARLAVLLEQADRTAAGTSTSRAAR
Ga0193749_103903513300020010SoilMLLDPVLWLFVLSVGLLVAGVLGVVVATRRARQSERLGVPGVSSDLGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLARLAVLLEQADRTAAGTSTSRAAR
Ga0193733_109351523300020022SoilMLLDPVLWLFVLSVGLLVVGLLGVVVATRRARLSERQGMPGVSPDLGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLARLAVLLEQADRTAAGTSTSRAAR
Ga0206356_1035993723300020070Corn, Switchgrass And Miscanthus RhizosphereMLLDPVLWVFVRAAALLVVAVVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGAPTSRLTR
Ga0206353_1096711413300020082Corn, Switchgrass And Miscanthus RhizosphereMLLDPVLWVFVLAAALLVVAVVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGAPTSRLTR
Ga0179592_1048956413300020199Vadose Zone SoilMLMDPVLWLFVLSVGLLVAGVLGVVVATRRARQSERQGVPGVSSDLGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLGRLAVLLDQADRAAARAPTSRATR
Ga0210407_1032615413300020579SoilGAHRVPPDAHRTMAPGPARGRLFAMLLDPVLWLFVLSVGLVVVGVLGVVVATRRARRGERLGLPGIEPDLGSDFARIHELNTEVKRLGDECDRLLAERDELEAVLNRLAVLLELADRAAAGIPSSHGR
Ga0210399_1134470813300020581SoilPPRPLRGAPRPPDAHRTMAPGPARGRLFAMLLDPVLWLFVLSVGLVVVGVLGVVVATRRARRGERLGLPGIEPDLGSDFARIHELNTEVKRLGDECDRLLAERDELEAVLNRLAVLLELADRAAAGIPSSPGR
Ga0210404_1002742623300021088SoilMLLDPVLWLFVLSVGLVVVGVLGVVVATRRARRGERLGLPGIEPDLGSDFARIHELNTEVKRLGDECDRLLAERDELEAVLNRLAVLLERADRAAAGIPASHGR
Ga0210400_1008686623300021170SoilMLLDPVLWLFVLSVGLVVVGVLGVVVATRRARRGERLGLPGIEPDLGSDFARIHELNTEVKRLGDECDRLLAERDELEAVLNRLAVLLERADRAAAGIPAPHGR
Ga0182009_1055322923300021445SoilVSWAEPGGSRLAPARGSGETALRAPAGGRLFAMLLDPVLWVFVLAAALLVVAVVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGVPTSRLTR
Ga0210410_1018761343300021479SoilMLLDPVLWLFVLSVGLVVVGVLGVVVATRRARRGERLGLPGIEPDLGSDFARIHELNTEVKRLGDECDRLLAERDELEAVLNRLAVLLERADRAAAGIPSSHGR
Ga0242656_107276013300022525SoilVLWLFVLSVGLVVVGVLGVVVATRRARRGERLGLPGIEPDLGSDFARIHELNTEVKRLGDECDRLLAERDELEAVLNRLAVLLERADRAAAGIPASRGR
Ga0207697_1050094213300025315Corn, Switchgrass And Miscanthus RhizosphereGSGETALRAPAGGRLFAMLLDPVLWVFVLAAALLVVAVVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGAPTSRLTR
Ga0207656_1035167813300025321Corn RhizosphereFVLAAALLVVAVVGVVIATRRACQGQPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGAPTSRLTR
Ga0207688_1001639213300025901Corn, Switchgrass And Miscanthus RhizospherePRRLAPARGSGETALRAPAGGRLFAMLLDPVLWVFVLAAALLVVAVVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGVPTSRLTR
Ga0207647_1019661333300025904Corn RhizosphereACWLAPARGSGETALRAPAGGRLFAMLLDPVLWVFVLAAALLVVAVVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGAPTSRLTR
Ga0207685_1082806323300025905Corn, Switchgrass And Miscanthus RhizosphereLFVLSVGLLVVGVLGVVVATRRARRGERLGLPGIAPDLGSDFARIHELNTEVKRLGDECDRLLAERAELEAVLNRLAVLLERADRAAAGIPTSHRR
Ga0207684_1001446253300025910Corn, Switchgrass And Miscanthus RhizosphereMLLDPVLWLFVLSVGLLVVGVLGVVVATRRARQSERQGVPGMSPDLGSDFARIHELQTQVKQLGDEYDRLAAERDELQAVLARLAVLLEQANRAAAVAPSSRAPS
Ga0207684_1027139033300025910Corn, Switchgrass And Miscanthus RhizosphereMLLDPVLWLFVLSVGLLVVGVLGVVVATRRARRGERLGLPGIAPELGSDFARIHELNTEVKRLGDECDRLLAERAELEAVLNRLAVLLERADRAAAGIPTSHGR
Ga0207649_1007267213300025920Corn RhizosphereVAVVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGAPTSRLTR
Ga0207646_1001881273300025922Corn, Switchgrass And Miscanthus RhizosphereMLLDPVLWLFVLSVGLLVVGVLGVVVATRRARQSERQGVPGVSPDLGSDFARIHELQTQVKQLGDEYDRLAAERDELQAVLARLAVLLEQANRAAAVAPSSRAPS
Ga0207650_1004397643300025925Switchgrass RhizosphereMLLDPVLWVFVLAAALLVVAVVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGVPTSRLTR
Ga0207706_1000034513300025933Corn RhizosphereMLLDPVLWVFVLAAALLVVAVVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGVA
Ga0207709_1028861523300025935Miscanthus RhizosphereMLLDPVLWVFVLAAALLVVAVVGVVIATRRACQGQPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGVPTSRLTR
Ga0207661_1003396113300025944Corn RhizosphereMLLDPVLWVFVLAAALLVVAVVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGATTSRLTR
Ga0207679_10000896113300025945Corn RhizosphereMLLDPVLWVFVLAAALLVVAVVGVVIATRRACQGQPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGAPTSRLTR
Ga0207658_1128987613300025986Switchgrass RhizosphereMLLDPVLWVFVLAAALLVVAVVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRAEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGAPTSRLTR
Ga0209438_116612223300026285Grasslands SoilMLMDPVLWLFVLSVGLLVAGVLGVVVATRRARQSERQGVPGVSSDLGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLGRLAVL
Ga0257162_103633713300026340SoilGDAPPGGTKLLDPGRGRLFAMLMDPVLWLFVLSVGLLVAGVLGVVVATRRARQSERQGVPGVSSDLGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLGRLAVLLDQADRAAARAPTSRATR
Ga0257180_100974813300026354SoilAPPGGTKLLDPGRGRLFAMLMDPVLWLFVLSVGLLVAGVLGVVVATRRARQSERQGVPGVSSDLGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLGRLAVLLDQADRAAARAPTSRATR
Ga0257179_101111613300026371SoilAPPGGTKLLDPGRGRLFAMLMDPVLWLFVLSVGLLVAGVLGVVVATRRARQSERQGVPGVSSDLGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLARLAVLLEQANRAAAVAPTSRAPR
Ga0257155_100876333300026481SoilMLLDPVLWLFVLSVGLLVVGVLGVVVATRRARLSERQGVPGVSPDVGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLGRLAVLLDQADRAAARAPTSRATR
Ga0257157_100434633300026496SoilMLLDPVLWLFVLSVGLLVVGVLGVVVATRRARLSERQGVPGVSPDVGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLARLAVLLEQADRTAAGTSTSRVAR
Ga0257157_109215523300026496SoilLLVAGVLGVVVATRRARQSERQGVPGVSSDLGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLGRLAVLLDQADRAAARAPTSRATR
Ga0257168_100005363300026514SoilMLVDPVLWLFVLSVGLLVVGVLGVVVATRRARQSERQGVPGVSPALGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLARLAVLLEQANRAAAVAPTSRAPR
Ga0209648_1001092863300026551Grasslands SoilMLVDPVLWLFVLSVGLLVVGVLGVVVATRRARQSERQGVPGVSRALGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLARLAVLLEQANRAAAVAPTSRAPR
Ga0209177_1000066913300027775Agricultural SoilRGSGETALRAPAGGRLFAMLLAPVLWVFVLAAALLVVAGVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVPGAPTSRLTR
Ga0209068_1000686353300027894WatershedsMLLLDPVLWLFVLSVGLLVVGVLGVVVATRRARQSERMGVPGVTPDVGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLARLAVLLEQVDRAAAGAPTSRAAR
Ga0209526_1016300613300028047Forest SoilPGRPRAYRTMAPGPARGRLFAMLLDPVLWLFVLSVGLLVVGVLGVVVATRRARRGERLGLPGIEPDLGSDFARIHELNTEVKRLGDECDRLLAERDELETVLNRLALLLERADRAAAGIPASHRR
Ga0209526_1029334223300028047Forest SoilMLLDPVLWLFVLSVGLLVVGVLGVVVATRRARLSERQGAPGVSPDVGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLARLAVLLEQADRTAAGTSTSRAAR
Ga0268264_1012254243300028381Switchgrass RhizosphereMLLDPVLWVFVLAAALLVVAVVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGAP
Ga0307284_1015182423300028799SoilMLLDPVLWLFVLSVGLLVAGVLGVVVATRRARQSERQGMPGVSPDLGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLARLSVLLEQADRAGAGTSTS
Ga0307304_1036329223300028885SoilLLVAGVLGVVVATRRARQSERQGMPGVSPDLGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLARLSVLLEQADRAGAGTSTSRVAR
Ga0247827_1053748913300028889SoilLRAPAGGRLFAMLLDPVLWVFVLAAALLVVAVVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGAPTSRLTR
Ga0247826_1033640733300030336SoilLVVAVVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGAPTSRLTR
(restricted) Ga0255311_101605333300031150Sandy SoilMLLDPVFWLFVLSVGLLLVGVLGVVVATRRARKSEQLGLPGVSPDLGSDFARIHELQTQVKQLGDEYDRLLAERDELEAVLTRLAGLLEQADRAAAGLAASAPPHAGHRATR
(restricted) Ga0255310_1001869533300031197Sandy SoilMLLDPVFWLFVLSVGLLLVGVLGVVVATRRARKSEQLGLPGVSPDLGSDFVRIHELQTQVKRLGDEYDRLLAERDELEAVLTRLAGLLEQADRAAAGLAAAAPDHAGHRVTR
Ga0307469_1033665823300031720Hardwood Forest SoilMLMDPVLWLFVLSVGLLVAGVLGVVVATRRARQSERQGVPGVSSDLGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLGRLAVLLDQADRAAAPTSRATR
Ga0307469_1089524313300031720Hardwood Forest SoilMLLDPVLWLFVLSVGLVVVGVLGVVVATRRARRGERLGLPGIEPDLGSDFARIHELNTEVKRLGDECDRLLAQRDELEAVLNRLAVLLERADRAAAGIPASHGR
Ga0307473_1090537813300031820Hardwood Forest SoilMLLDPVLWLFVLSVGLLVVGVLGVIVATRRARRGERLGLSGIEPDLGSDFARIHELNTEVKRLGDECDRLLAERDELEAVLNRLAVLLERADRAAAGIPSSHGR
Ga0310884_1037743013300031944SoilMLLDPVLWLFVLSVGLLVVGVLGVVVATRRARRSEQQGVPGVTPDLGSDFARIHELQTQVKRLGDEYDRLLVERDELEAVLTRLAALLEQA
Ga0307479_1009619023300031962Hardwood Forest SoilMLLDPVLWLFVLSVGLLVVGVLGVVVATRRARRGERLGLPGIAPELGSEFARIHELNTEVKRLGDECDRLLAERDELEAVLNRLAVLLERADRAAAGIPTSHGR
Ga0307470_1039133213300032174Hardwood Forest SoilMLMDPVLWLFVLSVGLLVAGVLGVVVATRRARQSERQGVPGVSSDLGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLGRLAVLLDQ
Ga0307470_1070071123300032174Hardwood Forest SoilMLLDPVLWLFVLSVGLLVVGLLGVVVATRRARLSERQGVPGVSPDVGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLARLAVLLEQADRAAPGASTSRAAR
Ga0307470_1142413013300032174Hardwood Forest SoilLFAMLLDPVLWLFVLSVGLVVVGVLGVVVATRRARRGERLGLPGIEPDLGSEFARIHELNTEVKRLGDECDRLLAERDELEAVLNRLAVLLERADRAAAGIPASHGR
Ga0307471_10027259223300032180Hardwood Forest SoilMLLDPVLWLFVLSVGLLVVGVLGVIVATRRARRGERLGLPGIEPDLGSDFARIHELNTEVKRLGDECDRLLAERDELEAVLNRLAVLLERADRAAAGIPASHGR
Ga0307472_10113393723300032205Hardwood Forest SoilMLLDPVLWLFVLSVGLLVVGVLGVIVATRRARRGERLGLSGIEPDLGSDFARIHELNTEVKRLGDECDRLLAERDELEAVLNRLAVLLERADRAAAGIPASHGR
Ga0335070_1104710223300032829SoilPRGRLSAMLLDPVFWLFVLSVGLLAVGVLGVVVATRRARQNEQLGLPGVSPDLGSDFARIHELQTQVKRLGDEYDRLLAERDELEAVLSRLAGLLEQADRAAAGLAASAPGHPGRVTRVT
Ga0326729_100163513300033432Peat SoilMLLDPVFWLFVLSVGLLVVGVLGVVVATRRARKSEQLGLPGVSPDLGSDFARIHELQTQVKRLGDEYDRLLAERDELEAVLTRLAGLLEQVDRTAAGLAASAADHAGHRVTRVTR
Ga0326726_10003519123300033433Peat SoilMLLDPVFWLFVLSVALLVVGVLGVVVATRRARQSERLGVPGVSPDLGSDFARIHELQTQVKRLGDEYDRLLAERDELETVLTRLAVLLEQADRAAAGLPTSTPEHAGRTTR
Ga0316620_1178242513300033480SoilRPAVPPPRPAPAGSARLPGPARGRLFAMLLDPVFWLFVLSVGLLVVGVLGVVVATRRARQNERLGVPGVSPDLGSDFTRIHELQTQVKRLGDEYDRLLAERDELETVLTRLAVLLEQADRAAAGLPTSTPEHAGRTTR
Ga0316628_10022583553300033513SoilMLLDPVFWLFVLSVALLVIGVLGVVVATRRARRNERLGVPGMSPDLGSDFARIHELQTQVKRLGDEYDRLLAERDELETVLTRLAVLLEQADRAAAGLPTSTPEHAGRTTR
Ga0316628_10060273833300033513SoilMLLDPVFWLFVLSVGLLLVGVLGVVVATRRARQNERLGVPGVSPDLGSDFARIHELQTQVKRLGDEYDRLLAERDELEAVLTRLAGLLEQADRAAAGLAASAPGHPGRVTRVTR
Ga0373958_0116787_285_6293300034819Rhizosphere SoilMLLDPVFWLFVLSVGLLVVGVLGVVVATRRARQSERLGVPGVSPDVGSDFARIHELQTQVKRLGDEYDRLLVERDELEAVLTRLAALLEQADRAAAGLAASAPQPAGRLTRVTR


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