Basic Information | |
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Family ID | F059313 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 134 |
Average Sequence Length | 107 residues |
Representative Sequence | MLLDPVLWLFVLSVGLLVVGVLGVVVATRRARLSERQGVPGVSPDVGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLGRLAVLLDQADRAAARAPTSRATR |
Number of Associated Samples | 121 |
Number of Associated Scaffolds | 134 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 18.66 % |
% of genes near scaffold ends (potentially truncated) | 41.79 % |
% of genes from short scaffolds (< 2000 bps) | 68.66 % |
Associated GOLD sequencing projects | 114 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (77.612 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (11.940 % of family members) |
Environment Ontology (ENVO) | Unclassified (29.851 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (42.537 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Transmembrane (alpha-helical) | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 76.19% β-sheet: 0.00% Coil/Unstructured: 23.81% | Feature Viewer |
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Pfam ID | Name | % Frequency in 134 Family Scaffolds |
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PF11716 | MDMPI_N | 23.88 |
PF08020 | DUF1706 | 17.91 |
PF12697 | Abhydrolase_6 | 11.94 |
PF01035 | DNA_binding_1 | 8.21 |
PF01182 | Glucosamine_iso | 4.48 |
PF01966 | HD | 1.49 |
PF00460 | Flg_bb_rod | 1.49 |
PF00296 | Bac_luciferase | 1.49 |
PF14833 | NAD_binding_11 | 1.49 |
PF02668 | TauD | 1.49 |
PF13291 | ACT_4 | 0.75 |
PF01177 | Asp_Glu_race | 0.75 |
PF12867 | DinB_2 | 0.75 |
PF12695 | Abhydrolase_5 | 0.75 |
PF01799 | Fer2_2 | 0.75 |
PF00903 | Glyoxalase | 0.75 |
COG ID | Name | Functional Category | % Frequency in 134 Family Scaffolds |
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COG4283 | Uncharacterized conserved protein DfsB/IRC4, DUF1706 (PF08020) domain | General function prediction only [R] | 17.91 |
COG0350 | DNA repair enzyme Ada (O6-methylguanine-DNA--protein-cysteine methyltransferase) | Replication, recombination and repair [L] | 8.21 |
COG3695 | Alkylated DNA nucleotide flippase Atl1, participates in nucleotide excision repair, Ada-like DNA-binding domain | Transcription [K] | 8.21 |
COG0363 | 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase | Carbohydrate transport and metabolism [G] | 4.48 |
COG1256 | Flagellar hook-associated protein FlgK | Cell motility [N] | 1.49 |
COG1558 | Flagellar basal body rod protein FlgC | Cell motility [N] | 1.49 |
COG1749 | Flagellar hook protein FlgE | Cell motility [N] | 1.49 |
COG1815 | Flagellar basal body rod protein FlgB | Cell motility [N] | 1.49 |
COG2141 | Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase) | Coenzyme transport and metabolism [H] | 1.49 |
COG2175 | Taurine dioxygenase, alpha-ketoglutarate-dependent | Secondary metabolites biosynthesis, transport and catabolism [Q] | 1.49 |
COG4786 | Flagellar basal body rod protein FlgG | Cell motility [N] | 1.49 |
COG4787 | Flagellar basal body rod protein FlgF | Cell motility [N] | 1.49 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 77.61 % |
Unclassified | root | N/A | 22.39 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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2088090015|GPICI_9103295 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1001 | Open in IMG/M |
2228664021|ICCgaii200_c0860880 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1048 | Open in IMG/M |
3300003324|soilH2_10077319 | All Organisms → cellular organisms → Bacteria | 9678 | Open in IMG/M |
3300004157|Ga0062590_100022778 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 2989 | Open in IMG/M |
3300004463|Ga0063356_100367803 | All Organisms → cellular organisms → Bacteria | 1829 | Open in IMG/M |
3300005174|Ga0066680_10157505 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1423 | Open in IMG/M |
3300005331|Ga0070670_100002280 | All Organisms → cellular organisms → Bacteria | 15795 | Open in IMG/M |
3300005341|Ga0070691_10075268 | All Organisms → cellular organisms → Bacteria | 1644 | Open in IMG/M |
3300005345|Ga0070692_10003051 | All Organisms → cellular organisms → Bacteria | 6690 | Open in IMG/M |
3300005354|Ga0070675_100130764 | All Organisms → cellular organisms → Bacteria | 2139 | Open in IMG/M |
3300005406|Ga0070703_10040856 | Not Available | 1444 | Open in IMG/M |
3300005434|Ga0070709_10642559 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 821 | Open in IMG/M |
3300005440|Ga0070705_100389112 | Not Available | 1029 | Open in IMG/M |
3300005467|Ga0070706_100008187 | All Organisms → cellular organisms → Bacteria | 9754 | Open in IMG/M |
3300005468|Ga0070707_100168054 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2137 | Open in IMG/M |
3300005468|Ga0070707_101121881 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 752 | Open in IMG/M |
3300005471|Ga0070698_100094114 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2975 | Open in IMG/M |
3300005529|Ga0070741_10000972 | All Organisms → cellular organisms → Bacteria | 94014 | Open in IMG/M |
3300005546|Ga0070696_101053639 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 682 | Open in IMG/M |
3300005557|Ga0066704_10579028 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 726 | Open in IMG/M |
3300005834|Ga0068851_10410185 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 798 | Open in IMG/M |
3300005875|Ga0075293_1014393 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 946 | Open in IMG/M |
3300005879|Ga0075295_1010748 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 957 | Open in IMG/M |
3300005888|Ga0075289_1094943 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → Azorhizobium doebereinerae | 503 | Open in IMG/M |
3300006050|Ga0075028_100090173 | All Organisms → cellular organisms → Bacteria | 1547 | Open in IMG/M |
3300006172|Ga0075018_10081319 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1407 | Open in IMG/M |
3300006173|Ga0070716_100011562 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria | 4446 | Open in IMG/M |
3300006175|Ga0070712_100307263 | Not Available | 1285 | Open in IMG/M |
3300006755|Ga0079222_10758146 | Not Available | 782 | Open in IMG/M |
3300006804|Ga0079221_10069099 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales | 1644 | Open in IMG/M |
3300006806|Ga0079220_10039803 | Not Available | 2148 | Open in IMG/M |
3300006806|Ga0079220_10206630 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1139 | Open in IMG/M |
3300006806|Ga0079220_11497047 | Not Available | 579 | Open in IMG/M |
3300006854|Ga0075425_101256238 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 840 | Open in IMG/M |
3300006903|Ga0075426_10009239 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 7021 | Open in IMG/M |
3300006903|Ga0075426_10533303 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 873 | Open in IMG/M |
3300006914|Ga0075436_100455934 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 931 | Open in IMG/M |
3300006954|Ga0079219_10018014 | All Organisms → cellular organisms → Bacteria | 2552 | Open in IMG/M |
3300009038|Ga0099829_11014600 | Not Available | 688 | Open in IMG/M |
3300009088|Ga0099830_10292623 | All Organisms → cellular organisms → Bacteria | 1298 | Open in IMG/M |
3300009143|Ga0099792_10094534 | All Organisms → cellular organisms → Bacteria | 1557 | Open in IMG/M |
3300009147|Ga0114129_10322466 | All Organisms → cellular organisms → Bacteria | 2053 | Open in IMG/M |
3300009148|Ga0105243_10753275 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 955 | Open in IMG/M |
3300009162|Ga0075423_10006348 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 11101 | Open in IMG/M |
3300010362|Ga0126377_11124396 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 855 | Open in IMG/M |
3300010400|Ga0134122_11566870 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 681 | Open in IMG/M |
3300010400|Ga0134122_12732680 | Not Available | 546 | Open in IMG/M |
3300010401|Ga0134121_10494334 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1125 | Open in IMG/M |
3300010403|Ga0134123_10008769 | All Organisms → cellular organisms → Bacteria | 6813 | Open in IMG/M |
3300012096|Ga0137389_10494737 | Not Available | 1048 | Open in IMG/M |
3300012202|Ga0137363_11183333 | Not Available | 650 | Open in IMG/M |
3300012202|Ga0137363_11520579 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 561 | Open in IMG/M |
3300012361|Ga0137360_11427684 | Not Available | 595 | Open in IMG/M |
3300012362|Ga0137361_10433743 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1207 | Open in IMG/M |
3300012363|Ga0137390_10055172 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 3864 | Open in IMG/M |
3300012582|Ga0137358_10075167 | All Organisms → cellular organisms → Bacteria | 2271 | Open in IMG/M |
3300012931|Ga0153915_10509550 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1376 | Open in IMG/M |
3300012958|Ga0164299_10016301 | All Organisms → cellular organisms → Bacteria | 2928 | Open in IMG/M |
3300012961|Ga0164302_10019986 | All Organisms → cellular organisms → Bacteria | 2877 | Open in IMG/M |
3300012984|Ga0164309_11811780 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 523 | Open in IMG/M |
3300013297|Ga0157378_11675214 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 683 | Open in IMG/M |
3300014745|Ga0157377_10111501 | Not Available | 1645 | Open in IMG/M |
3300015371|Ga0132258_10370534 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 3548 | Open in IMG/M |
3300015372|Ga0132256_101049266 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 930 | Open in IMG/M |
3300017927|Ga0187824_10137978 | Not Available | 803 | Open in IMG/M |
3300017930|Ga0187825_10325200 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 577 | Open in IMG/M |
3300017936|Ga0187821_10055850 | All Organisms → cellular organisms → Bacteria | 1419 | Open in IMG/M |
3300017994|Ga0187822_10010496 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2208 | Open in IMG/M |
3300019881|Ga0193707_1024725 | All Organisms → cellular organisms → Bacteria | 1979 | Open in IMG/M |
3300020002|Ga0193730_1098308 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 817 | Open in IMG/M |
3300020010|Ga0193749_1039035 | Not Available | 919 | Open in IMG/M |
3300020022|Ga0193733_1093515 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 841 | Open in IMG/M |
3300020070|Ga0206356_10359937 | Not Available | 810 | Open in IMG/M |
3300020082|Ga0206353_10967114 | Not Available | 966 | Open in IMG/M |
3300020199|Ga0179592_10489564 | Not Available | 528 | Open in IMG/M |
3300020579|Ga0210407_10326154 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1200 | Open in IMG/M |
3300020581|Ga0210399_11344708 | Not Available | 561 | Open in IMG/M |
3300021088|Ga0210404_10027426 | All Organisms → cellular organisms → Bacteria | 2516 | Open in IMG/M |
3300021170|Ga0210400_10086866 | All Organisms → cellular organisms → Bacteria | 2463 | Open in IMG/M |
3300021445|Ga0182009_10553229 | Not Available | 611 | Open in IMG/M |
3300021479|Ga0210410_10187613 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1850 | Open in IMG/M |
3300022525|Ga0242656_1072760 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 633 | Open in IMG/M |
3300025315|Ga0207697_10500942 | Not Available | 536 | Open in IMG/M |
3300025321|Ga0207656_10351678 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 736 | Open in IMG/M |
3300025901|Ga0207688_10016392 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 4019 | Open in IMG/M |
3300025904|Ga0207647_10196613 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1167 | Open in IMG/M |
3300025905|Ga0207685_10828063 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 511 | Open in IMG/M |
3300025910|Ga0207684_10014462 | All Organisms → cellular organisms → Bacteria | 6803 | Open in IMG/M |
3300025910|Ga0207684_10271390 | All Organisms → cellular organisms → Bacteria | 1463 | Open in IMG/M |
3300025920|Ga0207649_10072672 | All Organisms → cellular organisms → Bacteria | 2201 | Open in IMG/M |
3300025922|Ga0207646_10018812 | All Organisms → cellular organisms → Bacteria | 6435 | Open in IMG/M |
3300025925|Ga0207650_10043976 | All Organisms → cellular organisms → Bacteria | 3281 | Open in IMG/M |
3300025933|Ga0207706_10000345 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 50186 | Open in IMG/M |
3300025935|Ga0207709_10288615 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1215 | Open in IMG/M |
3300025944|Ga0207661_10033961 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 3963 | Open in IMG/M |
3300025945|Ga0207679_10000896 | All Organisms → cellular organisms → Bacteria | 19003 | Open in IMG/M |
3300025986|Ga0207658_11289876 | Not Available | 668 | Open in IMG/M |
3300026285|Ga0209438_1166122 | Not Available | 580 | Open in IMG/M |
3300026340|Ga0257162_1036337 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 612 | Open in IMG/M |
3300026354|Ga0257180_1009748 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1133 | Open in IMG/M |
3300026371|Ga0257179_1011116 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 944 | Open in IMG/M |
3300026481|Ga0257155_1008763 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1321 | Open in IMG/M |
3300026496|Ga0257157_1004346 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017 | 2134 | Open in IMG/M |
3300026496|Ga0257157_1092155 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 528 | Open in IMG/M |
3300026514|Ga0257168_1000053 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 6336 | Open in IMG/M |
3300026551|Ga0209648_10010928 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 7877 | Open in IMG/M |
3300027775|Ga0209177_10000669 | All Organisms → cellular organisms → Bacteria | 5494 | Open in IMG/M |
3300027894|Ga0209068_10006863 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales | 5364 | Open in IMG/M |
3300028047|Ga0209526_10163006 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1558 | Open in IMG/M |
3300028047|Ga0209526_10293342 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1102 | Open in IMG/M |
3300028381|Ga0268264_10122542 | All Organisms → cellular organisms → Bacteria | 2293 | Open in IMG/M |
3300028799|Ga0307284_10151824 | Not Available | 894 | Open in IMG/M |
3300028885|Ga0307304_10363292 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 649 | Open in IMG/M |
3300028889|Ga0247827_10537489 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 738 | Open in IMG/M |
3300030336|Ga0247826_10336407 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1095 | Open in IMG/M |
(restricted) 3300031150|Ga0255311_1016053 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1526 | Open in IMG/M |
(restricted) 3300031197|Ga0255310_10018695 | Not Available | 1785 | Open in IMG/M |
3300031720|Ga0307469_10336658 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1260 | Open in IMG/M |
3300031720|Ga0307469_10895243 | Not Available | 821 | Open in IMG/M |
3300031820|Ga0307473_10905378 | Not Available | 637 | Open in IMG/M |
3300031944|Ga0310884_10377430 | Not Available | 810 | Open in IMG/M |
3300031962|Ga0307479_10096190 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2875 | Open in IMG/M |
3300032174|Ga0307470_10391332 | Not Available | 979 | Open in IMG/M |
3300032174|Ga0307470_10700711 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 772 | Open in IMG/M |
3300032174|Ga0307470_11424130 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 573 | Open in IMG/M |
3300032180|Ga0307471_100272592 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1761 | Open in IMG/M |
3300032205|Ga0307472_101133937 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 742 | Open in IMG/M |
3300032829|Ga0335070_11047102 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 752 | Open in IMG/M |
3300033432|Ga0326729_1001635 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 4749 | Open in IMG/M |
3300033433|Ga0326726_10003519 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 14371 | Open in IMG/M |
3300033480|Ga0316620_11782425 | Not Available | 611 | Open in IMG/M |
3300033513|Ga0316628_100225835 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 2272 | Open in IMG/M |
3300033513|Ga0316628_100602738 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1431 | Open in IMG/M |
3300034819|Ga0373958_0116787 | Not Available | 641 | Open in IMG/M |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Habitat | Taxonomy | Distribution |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 11.94% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 9.70% |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 8.21% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 6.72% |
Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 6.72% |
Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 5.22% |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 4.48% |
Freshwater Sediment | Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment | 2.99% |
Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 2.99% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 2.99% |
Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 2.99% |
Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 2.24% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 2.24% |
Rice Paddy Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil | 2.24% |
Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 2.24% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 2.24% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 2.24% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 1.49% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 1.49% |
Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 1.49% |
Sandy Soil | Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil | 1.49% |
Peat Soil | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil | 1.49% |
Corn, Switchgrass And Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 1.49% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 1.49% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 1.49% |
Freshwater Wetlands | Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands | 0.75% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 0.75% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 0.75% |
Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 0.75% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 0.75% |
Sugarcane Root And Bulk Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil | 0.75% |
Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 0.75% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 0.75% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 0.75% |
Arabidopsis Thaliana Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere | 0.75% |
Rhizosphere Soil | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil | 0.75% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 0.75% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere | 0.75% |
Visualization |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Taxon OID | Sample Name | Habitat Type | IMG/M Link |
---|---|---|---|
2088090015 | Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil | Environmental | Open in IMG/M |
2228664021 | Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil | Environmental | Open in IMG/M |
3300003324 | Sugarcane bulk soil Sample H2 | Environmental | Open in IMG/M |
3300004157 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2 | Environmental | Open in IMG/M |
3300004463 | Combined assembly of Arabidopsis thaliana microbial communities | Host-Associated | Open in IMG/M |
3300005174 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 | Environmental | Open in IMG/M |
3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Host-Associated | Open in IMG/M |
3300005341 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG | Environmental | Open in IMG/M |
3300005345 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG | Environmental | Open in IMG/M |
3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Host-Associated | Open in IMG/M |
3300005406 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG | Environmental | Open in IMG/M |
3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Environmental | Open in IMG/M |
3300005440 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG | Environmental | Open in IMG/M |
3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Environmental | Open in IMG/M |
3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Environmental | Open in IMG/M |
3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Environmental | Open in IMG/M |
3300005529 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1 | Environmental | Open in IMG/M |
3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Environmental | Open in IMG/M |
3300005557 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 | Environmental | Open in IMG/M |
3300005834 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 | Host-Associated | Open in IMG/M |
3300005875 | Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_101 | Environmental | Open in IMG/M |
3300005879 | Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_301 | Environmental | Open in IMG/M |
3300005888 | Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103 | Environmental | Open in IMG/M |
3300006050 | Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014 | Environmental | Open in IMG/M |
3300006172 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014 | Environmental | Open in IMG/M |
3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Environmental | Open in IMG/M |
3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Environmental | Open in IMG/M |
3300006755 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter | Environmental | Open in IMG/M |
3300006804 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 | Environmental | Open in IMG/M |
3300006806 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 | Environmental | Open in IMG/M |
3300006854 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4 | Host-Associated | Open in IMG/M |
3300006903 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5 | Host-Associated | Open in IMG/M |
3300006914 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 | Host-Associated | Open in IMG/M |
3300006954 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control | Environmental | Open in IMG/M |
3300009038 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG | Environmental | Open in IMG/M |
3300009088 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG | Environmental | Open in IMG/M |
3300009143 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 | Environmental | Open in IMG/M |
3300009147 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) | Host-Associated | Open in IMG/M |
3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Host-Associated | Open in IMG/M |
3300009162 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2 | Host-Associated | Open in IMG/M |
3300010362 | Tropical forest soil microbial communities from Panama - MetaG Plot_22 | Environmental | Open in IMG/M |
3300010400 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2 | Environmental | Open in IMG/M |
3300010401 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1 | Environmental | Open in IMG/M |
3300010403 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3 | Environmental | Open in IMG/M |
3300012096 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG | Environmental | Open in IMG/M |
3300012202 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG | Environmental | Open in IMG/M |
3300012361 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG | Environmental | Open in IMG/M |
3300012362 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG | Environmental | Open in IMG/M |
3300012363 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG | Environmental | Open in IMG/M |
3300012582 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG | Environmental | Open in IMG/M |
3300012931 | Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG | Environmental | Open in IMG/M |
3300012958 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG | Environmental | Open in IMG/M |
3300012961 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG | Environmental | Open in IMG/M |
3300012984 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG | Environmental | Open in IMG/M |
3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Host-Associated | Open in IMG/M |
3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Host-Associated | Open in IMG/M |
3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
3300015372 | Soil combined assembly | Host-Associated | Open in IMG/M |
3300017927 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4 | Environmental | Open in IMG/M |
3300017930 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5 | Environmental | Open in IMG/M |
3300017936 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1 | Environmental | Open in IMG/M |
3300017994 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2 | Environmental | Open in IMG/M |
3300019881 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2 | Environmental | Open in IMG/M |
3300020002 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1 | Environmental | Open in IMG/M |
3300020010 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2 | Environmental | Open in IMG/M |
3300020022 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2 | Environmental | Open in IMG/M |
3300020070 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300020082 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300020199 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300020579 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M | Environmental | Open in IMG/M |
3300020581 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M | Environmental | Open in IMG/M |
3300021088 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M | Environmental | Open in IMG/M |
3300021170 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M | Environmental | Open in IMG/M |
3300021445 | Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG | Environmental | Open in IMG/M |
3300021479 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M | Environmental | Open in IMG/M |
3300022525 | Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300025315 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) | Host-Associated | Open in IMG/M |
3300025321 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300025901 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) | Host-Associated | Open in IMG/M |
3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) | Host-Associated | Open in IMG/M |
3300025905 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) | Environmental | Open in IMG/M |
3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300026285 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes) | Environmental | Open in IMG/M |
3300026340 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-A | Environmental | Open in IMG/M |
3300026354 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-B | Environmental | Open in IMG/M |
3300026371 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-B | Environmental | Open in IMG/M |
3300026481 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-A | Environmental | Open in IMG/M |
3300026496 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-A | Environmental | Open in IMG/M |
3300026514 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B | Environmental | Open in IMG/M |
3300026551 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes) | Environmental | Open in IMG/M |
3300027775 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes) | Environmental | Open in IMG/M |
3300027894 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes) | Environmental | Open in IMG/M |
3300028047 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes) | Environmental | Open in IMG/M |
3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300028799 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123 | Environmental | Open in IMG/M |
3300028885 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185 | Environmental | Open in IMG/M |
3300028889 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2 | Environmental | Open in IMG/M |
3300030336 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1 | Environmental | Open in IMG/M |
3300031150 (restricted) | Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4 | Environmental | Open in IMG/M |
3300031197 (restricted) | Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1 | Environmental | Open in IMG/M |
3300031720 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515 | Environmental | Open in IMG/M |
3300031820 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515 | Environmental | Open in IMG/M |
3300031944 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1 | Environmental | Open in IMG/M |
3300031962 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515 | Environmental | Open in IMG/M |
3300032174 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05 | Environmental | Open in IMG/M |
3300032180 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515 | Environmental | Open in IMG/M |
3300032205 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05 | Environmental | Open in IMG/M |
3300032829 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3 | Environmental | Open in IMG/M |
3300033432 | Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF6AY SIP fraction | Environmental | Open in IMG/M |
3300033433 | Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN | Environmental | Open in IMG/M |
3300033480 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B | Environmental | Open in IMG/M |
3300033513 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C | Environmental | Open in IMG/M |
3300034819 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1 | Host-Associated | Open in IMG/M |
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
GPICI_02992790 | 2088090015 | Soil | MLLDPVLWVFVLAAALLVVAVVGVVIATRQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAXERDEMEAVLNRLAVLLERADRAVQGAPTSRLTR |
ICCgaii200_08608801 | 2228664021 | Soil | GGSRLAPARGSGETALRAPAGGRLFAMLLDPVLWVFVLAAALLVVAVVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGAPTSRLTR |
soilH2_100773196 | 3300003324 | Sugarcane Root And Bulk Soil | MLLDPVLWLFVLATALLAAAVAGIVIATRRARQGEPLELPGLVPADQSSEFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLDRADRAVPGASASRLTH* |
Ga0062590_1000227783 | 3300004157 | Soil | MLLDPVLWVFVLAAALLVVAVVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGAPTSRLTR* |
Ga0063356_1003678034 | 3300004463 | Arabidopsis Thaliana Rhizosphere | GSRLAPARGSGETALRAPAGGRLFAMLLDPVLWVFVLAAALLVVAVVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGAPTSRLTR* |
Ga0066680_101575052 | 3300005174 | Soil | MLLDPVLWLFVLSVGLLVVGVLGVVVATRRARQSERQGVPGMSPDLGSDFARIHELQTQVKQLGDEYDRLAAERDELQAVLARLAVLLEQANRAAAVAPSSRAPS* |
Ga0070670_1000022806 | 3300005331 | Switchgrass Rhizosphere | MLLDPVLWVFVLAAALLVVAVVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGVPTSRLTR* |
Ga0070691_100752681 | 3300005341 | Corn, Switchgrass And Miscanthus Rhizosphere | MLLDPVFWLFVLSVGLLVVGVLGVVVATRRARQSERLGVPGVSPDVGSDFARIHELQTQVKRLGDEYDRLLVERDELEAVLTRLAALLEQADRAAAGLAASAPQPAGRLTRVTR* |
Ga0070692_100030511 | 3300005345 | Corn, Switchgrass And Miscanthus Rhizosphere | GSRLAPARGSGETALRAPAGGRLFAMLLDPVLWVFVLAAALLVVAVVGVVIATRRACQGQPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGAPTSRLTR* |
Ga0070675_1001307642 | 3300005354 | Miscanthus Rhizosphere | MLLDPVLWVFVLAAALLVVAVVGVVIATRRARQGEPLELPGLVPADQSSDFTRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGAPTSRLTR* |
Ga0070703_100408562 | 3300005406 | Corn, Switchgrass And Miscanthus Rhizosphere | MLMDPVLWLFVLSVGLLVAGVLGVVVATRRARQSERQGVPGVSSDLGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLGRLAVLLDQADRAAARAPTSRATR* |
Ga0070709_106425592 | 3300005434 | Corn, Switchgrass And Miscanthus Rhizosphere | GAPRPPATGRTMAPGPARGRLFAMLLDPVLWLFVLSVGLLVVGVLGVVVATRRARRGERLGLPGIAPDLGSDFARIHELNTEVKRLGDECDRLLAERDELEAVLNRLAVLLERADRAAAGIPTSHGR* |
Ga0070705_1003891122 | 3300005440 | Corn, Switchgrass And Miscanthus Rhizosphere | MLMDPVLWLFVLSVGLLVAGVLGVVVATRRARQSERQGVPGVSSDLGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLGRLAVLLDQADRAAARA |
Ga0070706_1000081872 | 3300005467 | Corn, Switchgrass And Miscanthus Rhizosphere | MLLDPVLWLFVLSVGLLVVGVLGVVVATRRARRGERLGLPGIAPELGSDFARIHELNTEVKRLGDECDRLLAERAELEAVLNRLAVLLERADRAAAGIPTSHGR* |
Ga0070707_1001680543 | 3300005468 | Corn, Switchgrass And Miscanthus Rhizosphere | MLLDPVLWLFVLSVGLLVVGVLGVVVATRRARQSERQGVPGVSPDLGSDFARIHELQTQVKQLGDEYDRLAAERDELQAVLARLAVLLEQANRAAAVAPSSRAPS* |
Ga0070707_1011218811 | 3300005468 | Corn, Switchgrass And Miscanthus Rhizosphere | DPVLWLFVLSVGLLVAGVLGVVVATRRARQSERQGVPGVSSDLGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLGRLAVLLDQADRAAARAPTSRATR* |
Ga0070698_1000941143 | 3300005471 | Corn, Switchgrass And Miscanthus Rhizosphere | MLMDPVLWLFVLSVGLLVAGVLGVVVATRRARQSERQGVPGVSSDLGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLGRLAVLLDQADRAAAPTSRATR* |
Ga0070741_1000097266 | 3300005529 | Surface Soil | MLTDPVLWLFVLAAALLAAAVAGVVIATRRARQGEPLELPGLVPAEQSSDFARLHELRSEVKRLGDECDRLAAERDELEAVLNRLSVLLDRADRTVPHPPASRLTRR* |
Ga0070696_1010536391 | 3300005546 | Corn, Switchgrass And Miscanthus Rhizosphere | MLLDPVLWLFVLSVGLLVAGVLGVVVATRRARQSERQGVPGVSSDLGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLGRLAVLLDQADRAAARAPTSRATR* |
Ga0066704_105790282 | 3300005557 | Soil | GVLGVVVATRRARQSERQGVPGVSPDLGSDFARIHELQTQVKQLGDEYDRLAAERDELQAVLARLAVLLEQANRAAAVAPSSRAPS* |
Ga0068851_104101852 | 3300005834 | Corn Rhizosphere | MLLDPVLWVFVLAAALLVVAVVGVVIATRRACQGQPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGAPTSRLTR* |
Ga0075293_10143932 | 3300005875 | Rice Paddy Soil | MLADPIFWLFVLSVGLLVVGVLGVVVATRRARQSERLGLPGVSPDLGSDFARIHELQTQVKRLGDEYDRLLAERDELEAVLTRLAALLEQADHAAGGLAASAATHAGRATRVTR* |
Ga0075295_10107482 | 3300005879 | Rice Paddy Soil | MLLDPVFWLFVLSVGLLVVGVLGVVVATRRARQSERPGLPGSSPDLGSDFARIHELQTQVKRLGDDYDRLLAERDELEAVLTRLAALLEQADHAAGGLAASAATHAGRATRVTR* |
Ga0075289_10949431 | 3300005888 | Rice Paddy Soil | PRGRLCAMLLDPVFWLFVLSVGLLVVGVLGVVVATRRARQSERLGLPGVSPDLGSDFARIHELQTQVKRLGDEYDRLLAERDELEAVLTRLGVLLEQADRAAAGLAASAPQPAGRVTRVTR* |
Ga0075028_1000901734 | 3300006050 | Watersheds | VLSVGLLVVGVLGVVVATRRARQSERMGVPGVTPDVGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLARLAVLLEQVDRAAAGAPTSRAAR* |
Ga0075018_100813193 | 3300006172 | Watersheds | MLLLDPVLWLFVLSVGLLVVGVLGVVVATRRARQSERMGVPGVTPDVGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLARLAVLLEQVDRAAAGAPTSRAAR* |
Ga0070716_1000115626 | 3300006173 | Corn, Switchgrass And Miscanthus Rhizosphere | LPAATGAPRPPATGRTMAPGPARGRLFAMLLDPVLWLFVLSVGLLVVGVLGVVVATRRARRGERLGLPGIAPDLGSDFARIHELNTEVKRLGDECDRLLAERAELEAVLNRLAVLLERADRAAAGIPTSHGR* |
Ga0070712_1003072632 | 3300006175 | Corn, Switchgrass And Miscanthus Rhizosphere | MLLDPVLWLFVLSVGLLVVGVLGVVVATRRARRGERLGLPGIAPDLGSDFARIHELNTEVKRLGDECDRLLAERAELEAVLNRLAVLLERADRAAAGIPTSHGR* |
Ga0079222_107581462 | 3300006755 | Agricultural Soil | MLLDPVLWLFVLSVGLLVVGVLGVVVATRRARRGERLGLPGIAPDLGSDFARIHELKTEVKRLGDECDRLVAERDELEVVLNRLAVLLERADRAAACIPTSHRR* |
Ga0079221_100690993 | 3300006804 | Agricultural Soil | MLLDPVLWVFVLAAALLVVAGVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGAPTSRLTR |
Ga0079220_100398033 | 3300006806 | Agricultural Soil | MLLDPVLWLFVLATALLAAAVAGIVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGAPTSRLTR* |
Ga0079220_102066302 | 3300006806 | Agricultural Soil | MLLDPVLWLFVLSVGLLVVGVLGVVVATRRARRGERLGLPGIAPDLGSDFARIHELKTEVKRLGDECNRLVAERDELEVVLNRLAVLLERADRAAAGIPTSHRR* |
Ga0079220_114970471 | 3300006806 | Agricultural Soil | MLLDPVFWLFALSSVLLLVGVLGVVVATRRARRSEQLGLPGVSPDLGSDFVRIHELQTQVKRLGDEYDRLLAERDELEAVLTRLAGLLEQADRAAAGLAASAPPPAGHRATR |
Ga0075425_1012562382 | 3300006854 | Populus Rhizosphere | LWLFVLSVGLLVVGVLGVVVATRRARRGERLGLPGIEPDLGSDFARIHELNTEVKRLGDECDRLLAERDELEAVLNRLAVLLERADRAAAGIPASHGR* |
Ga0075426_100092391 | 3300006903 | Populus Rhizosphere | DPVLWLFVLSVGLLVVGVLGVVVATRRARRGERLGLPGIAPDLGSDFARIHELKTEVKRLGDECDRLVAERDELEVVLNRLAVLLERADRAAAGIPTSHRR* |
Ga0075426_105333031 | 3300006903 | Populus Rhizosphere | DPVLWLFVLSVGLLVVGVLGVVVATRRARRGERLGLPGIEPDLGSDFARIHELNTEVKRLGDECDRLLAERDELEAVLNRLAVLLERADRAAAGIPASHGR* |
Ga0075436_1004559341 | 3300006914 | Populus Rhizosphere | ARGRLFAMLLDPVLWLFVLSVGLLVVGVLGVVVATRRARRGERLGLPGIAPDLGSDFARIHELKTEVKRLGDECDRLVAERDELEVVLNRLAVLLERADRAAAGIPTSHRR* |
Ga0079219_100180143 | 3300006954 | Agricultural Soil | MLLDPVLWVFVLAAALLVVAGVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVPGAPTSRLTR* |
Ga0099829_110146002 | 3300009038 | Vadose Zone Soil | MLMDPVLWLFVLSVGLLVAGVLGVVVATRRARQSERQGVPGVSSDLGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLGRLAVLLDQADRAAARAPT |
Ga0099830_102926233 | 3300009088 | Vadose Zone Soil | MLLDPVLWLFVLSVGLLVVGVLGVVVATRRARQSERQGVPGVSPALGSDFARIHELQTQVKQLGDEYDRLAAERDELQAVLARLAVLLEQANRAAAVAPSSRAPR* |
Ga0099792_100945343 | 3300009143 | Vadose Zone Soil | MLVDPVLWLFVLSVGLLVVGVLGVVVATRRARQSERQGVPGVSPALGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLARLAVLLEQANRAAAVAPTSRAPR* |
Ga0114129_103224663 | 3300009147 | Populus Rhizosphere | MLLDPVLWLFVLSVGLLVVGVLGVVVATRRARRGERLGLPGIAPDLGSDFARIHELKTEVKRLGDECDRLVAERDELEVVLNRLAVLLERADRAAAGIPTSHRR* |
Ga0105243_107532753 | 3300009148 | Miscanthus Rhizosphere | LWVFVLAAALLVVAVVGVVIATRRACQGQPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGAPTSRLTR* |
Ga0075423_100063486 | 3300009162 | Populus Rhizosphere | MLLDPVLWLFVLSVGLLVVGVLGVVVATRRARRGERLGLPGIAPDLGSDFARIHELKTEVKRLGDECDRLVAERDELEVVLNRLAVLLERADRAAAGIPTSQRR* |
Ga0126377_111243962 | 3300010362 | Tropical Forest Soil | MLLDPVLWLFALATILLGVAVAGVVIATRRARQGEPLELPGMVPADPSSDFSRLHELRTEVKRLGDECDRLGAERDELEAVLNRLSVMLERADRAVHPPASRLSP* |
Ga0134122_115668702 | 3300010400 | Terrestrial Soil | LDPVLWLFVLSVGLLVVGVLGVVVATRRARRSEQQGVPGVTPDLGSDFARIHELQTQVKRLDDEYDRLVAERDELEAVLVRFAVLLEQADRAAAPASRATR* |
Ga0134122_127326801 | 3300010400 | Terrestrial Soil | MLTDPVLWLFVLSVGLLVAGVLGVVVATRRARQSERQGVPGVTPGLGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLARLAVLLEQADRAAAGAPASRA |
Ga0134121_104943341 | 3300010401 | Terrestrial Soil | MLLDPVLWLFVLSVGLLVVGLLGVVVATRRARLSERQGVPGVSPDVGSDFARIHELQTQVKQLGDEYSRLAAERDELEAVLARLAVLLEQADRAAPGASTSRAAR* |
Ga0134123_100087697 | 3300010403 | Terrestrial Soil | RLAPARGSGETALRAPAGGRLFAMLLDPVLWVFVLAAALLVVAVVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGAPTSRLTR* |
Ga0137389_104947371 | 3300012096 | Vadose Zone Soil | MLMDPVLWLFVLSVGLLVAGVLGVVVATRRARQSERQGVPGVSSDLGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLDRRAVLLDQADRAAARAPTARATR* |
Ga0137363_111833332 | 3300012202 | Vadose Zone Soil | MLLDPVLWLFVLSVGLLVVGVLGVVVATRRARQSERQGVPGVSPDLGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLARLAVLLEQANRAAAVA |
Ga0137363_115205792 | 3300012202 | Vadose Zone Soil | FVLSVGLLVAGVLGVVVATRRARQSERQGVPGVSSDLGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLGRLAVLLDQADRAAARAPTSRATR* |
Ga0137360_114276841 | 3300012361 | Vadose Zone Soil | MLVDPVLWLFVLSVGLLVVGVLGVVVATRRARQSERQGVPGVSPDLGSDFARIHELQTQVKQLGDEYDRLAAERDELQAVLARLAVLLEQANRAAAVAPSSRAPS* |
Ga0137361_104337432 | 3300012362 | Vadose Zone Soil | MLLDPVLWLFVLSVGLLVVGVLGVVVATRRARQSERQGVPGVSPDLGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLARLAVLLEQANRAAAVAPSSRAPS* |
Ga0137390_100551724 | 3300012363 | Vadose Zone Soil | MLLDPVLWLFVLSVGLLVVGVLGVVVATRRARQSERQGVPGVSPALGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLARLAVLLEQANRAAAVAPTSRAPR* |
Ga0137358_100751674 | 3300012582 | Vadose Zone Soil | MLTDPVLWLFVLSVGLLVAGVLGVVVATRRARQSERQGVPGVSSDLGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLGRLAVLLDQADRAAARAPTSRATR* |
Ga0153915_105095502 | 3300012931 | Freshwater Wetlands | MLLDPVFWLFVLSVALLVIGVLGVVVAARRARRNERLGVPGMSPDLGSDFARIHELQTQVKRLGDEYDRLLAERDELETVLTRLAVLLEQADRAAAGLPTSTPEHAGRTTR* |
Ga0164299_100163011 | 3300012958 | Soil | MLLDPVLWVFVLAAALLVVAVVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADR |
Ga0164302_100199863 | 3300012961 | Soil | MLLDPVLWVFVLAAALLVVAVVGGVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGAPTSRLTR* |
Ga0164309_118117802 | 3300012984 | Soil | AAALLVVAVVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGAPTSRLTR* |
Ga0157378_116752142 | 3300013297 | Miscanthus Rhizosphere | VVAVVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGAPTSRLTR* |
Ga0157377_101115013 | 3300014745 | Miscanthus Rhizosphere | MLLGPVLWVFVLAAALLVVAVVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRAEVKRLGDECDRLVAERDEMESVLNRLAVLLERADRAVQGAPTSRLTR* |
Ga0132258_103705344 | 3300015371 | Arabidopsis Rhizosphere | MLLDPVFWLFVLSAGLLVVGVLGVVVATRRARRSEQLSLPGMSPDLGSDFARIHELQTQVKHLGDEYDRLLAERDELEAVLTRLAGLLEQADRAAAGLGGSAADRAGHRVTR* |
Ga0132256_1010492662 | 3300015372 | Arabidopsis Rhizosphere | MLLDPVLWVFVLAAALLVVAGVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGAPTSRLTR* |
Ga0187824_101379781 | 3300017927 | Freshwater Sediment | MLLDPVFWLFVLSVGLLLVGVLGVVVATRRARKSEQLGLPGVSPDLGSDFVRIHELQTQVKRLGDEYDRLLAERDELEAVLTRLAGLLEQADRAAAGLAASAPPPAGHRATR |
Ga0187825_103252001 | 3300017930 | Freshwater Sediment | SVGLLLVGVLGVVVATRRARKSEQLGLPGVSPDLGSDFVRIHELQTQVKRLGDEYDRLLAERGELEAVLTRLAGLLEQADRAGAGLAASAPPHAGHRTTR |
Ga0187821_100558502 | 3300017936 | Freshwater Sediment | MLLDPVFWLFALSSVLLLVGVLGVVVATRRARRSEQLGIPGVSPDLGSDFVRIHELQTQVKRLGDEYDRLLAERDELEAVLTRLAGLLEQADRAAAGLAASAPPPAGHRATR |
Ga0187822_100104964 | 3300017994 | Freshwater Sediment | MLLDPVFWLFVLSVGLLLVGVLGVVVATRRARKSEQLGLPGVSPDLGSDFVRIHELQTQVKRLGDEYDRLLAERGELEAVLTRLAGLLEQADRAAAGLAASAPPPAGHRATR |
Ga0193707_10247252 | 3300019881 | Soil | MLLDPVLWLFVLSVGLLVVGVLGVVVATRRARLSERQGVPGVSPDVGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLARLAVLLEQADRTAAGTSTSRAAR |
Ga0193730_10983081 | 3300020002 | Soil | KLLDLARGRLFAMLLDPVLWLFVLSVGLLVVGVLGVVVATRRARLSERQGVPGVSPDVGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLARLAVLLEQADRTAAGTSTSRAAR |
Ga0193749_10390351 | 3300020010 | Soil | MLLDPVLWLFVLSVGLLVAGVLGVVVATRRARQSERLGVPGVSSDLGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLARLAVLLEQADRTAAGTSTSRAAR |
Ga0193733_10935152 | 3300020022 | Soil | MLLDPVLWLFVLSVGLLVVGLLGVVVATRRARLSERQGMPGVSPDLGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLARLAVLLEQADRTAAGTSTSRAAR |
Ga0206356_103599372 | 3300020070 | Corn, Switchgrass And Miscanthus Rhizosphere | MLLDPVLWVFVRAAALLVVAVVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGAPTSRLTR |
Ga0206353_109671141 | 3300020082 | Corn, Switchgrass And Miscanthus Rhizosphere | MLLDPVLWVFVLAAALLVVAVVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGAPTSRLTR |
Ga0179592_104895641 | 3300020199 | Vadose Zone Soil | MLMDPVLWLFVLSVGLLVAGVLGVVVATRRARQSERQGVPGVSSDLGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLGRLAVLLDQADRAAARAPTSRATR |
Ga0210407_103261541 | 3300020579 | Soil | GAHRVPPDAHRTMAPGPARGRLFAMLLDPVLWLFVLSVGLVVVGVLGVVVATRRARRGERLGLPGIEPDLGSDFARIHELNTEVKRLGDECDRLLAERDELEAVLNRLAVLLELADRAAAGIPSSHGR |
Ga0210399_113447081 | 3300020581 | Soil | PPRPLRGAPRPPDAHRTMAPGPARGRLFAMLLDPVLWLFVLSVGLVVVGVLGVVVATRRARRGERLGLPGIEPDLGSDFARIHELNTEVKRLGDECDRLLAERDELEAVLNRLAVLLELADRAAAGIPSSPGR |
Ga0210404_100274262 | 3300021088 | Soil | MLLDPVLWLFVLSVGLVVVGVLGVVVATRRARRGERLGLPGIEPDLGSDFARIHELNTEVKRLGDECDRLLAERDELEAVLNRLAVLLERADRAAAGIPASHGR |
Ga0210400_100868662 | 3300021170 | Soil | MLLDPVLWLFVLSVGLVVVGVLGVVVATRRARRGERLGLPGIEPDLGSDFARIHELNTEVKRLGDECDRLLAERDELEAVLNRLAVLLERADRAAAGIPAPHGR |
Ga0182009_105532292 | 3300021445 | Soil | VSWAEPGGSRLAPARGSGETALRAPAGGRLFAMLLDPVLWVFVLAAALLVVAVVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGVPTSRLTR |
Ga0210410_101876134 | 3300021479 | Soil | MLLDPVLWLFVLSVGLVVVGVLGVVVATRRARRGERLGLPGIEPDLGSDFARIHELNTEVKRLGDECDRLLAERDELEAVLNRLAVLLERADRAAAGIPSSHGR |
Ga0242656_10727601 | 3300022525 | Soil | VLWLFVLSVGLVVVGVLGVVVATRRARRGERLGLPGIEPDLGSDFARIHELNTEVKRLGDECDRLLAERDELEAVLNRLAVLLERADRAAAGIPASRGR |
Ga0207697_105009421 | 3300025315 | Corn, Switchgrass And Miscanthus Rhizosphere | GSGETALRAPAGGRLFAMLLDPVLWVFVLAAALLVVAVVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGAPTSRLTR |
Ga0207656_103516781 | 3300025321 | Corn Rhizosphere | FVLAAALLVVAVVGVVIATRRACQGQPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGAPTSRLTR |
Ga0207688_100163921 | 3300025901 | Corn, Switchgrass And Miscanthus Rhizosphere | PRRLAPARGSGETALRAPAGGRLFAMLLDPVLWVFVLAAALLVVAVVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGVPTSRLTR |
Ga0207647_101966133 | 3300025904 | Corn Rhizosphere | ACWLAPARGSGETALRAPAGGRLFAMLLDPVLWVFVLAAALLVVAVVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGAPTSRLTR |
Ga0207685_108280632 | 3300025905 | Corn, Switchgrass And Miscanthus Rhizosphere | LFVLSVGLLVVGVLGVVVATRRARRGERLGLPGIAPDLGSDFARIHELNTEVKRLGDECDRLLAERAELEAVLNRLAVLLERADRAAAGIPTSHRR |
Ga0207684_100144625 | 3300025910 | Corn, Switchgrass And Miscanthus Rhizosphere | MLLDPVLWLFVLSVGLLVVGVLGVVVATRRARQSERQGVPGMSPDLGSDFARIHELQTQVKQLGDEYDRLAAERDELQAVLARLAVLLEQANRAAAVAPSSRAPS |
Ga0207684_102713903 | 3300025910 | Corn, Switchgrass And Miscanthus Rhizosphere | MLLDPVLWLFVLSVGLLVVGVLGVVVATRRARRGERLGLPGIAPELGSDFARIHELNTEVKRLGDECDRLLAERAELEAVLNRLAVLLERADRAAAGIPTSHGR |
Ga0207649_100726721 | 3300025920 | Corn Rhizosphere | VAVVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGAPTSRLTR |
Ga0207646_100188127 | 3300025922 | Corn, Switchgrass And Miscanthus Rhizosphere | MLLDPVLWLFVLSVGLLVVGVLGVVVATRRARQSERQGVPGVSPDLGSDFARIHELQTQVKQLGDEYDRLAAERDELQAVLARLAVLLEQANRAAAVAPSSRAPS |
Ga0207650_100439764 | 3300025925 | Switchgrass Rhizosphere | MLLDPVLWVFVLAAALLVVAVVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGVPTSRLTR |
Ga0207706_100003451 | 3300025933 | Corn Rhizosphere | MLLDPVLWVFVLAAALLVVAVVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGVA |
Ga0207709_102886152 | 3300025935 | Miscanthus Rhizosphere | MLLDPVLWVFVLAAALLVVAVVGVVIATRRACQGQPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGVPTSRLTR |
Ga0207661_100339611 | 3300025944 | Corn Rhizosphere | MLLDPVLWVFVLAAALLVVAVVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGATTSRLTR |
Ga0207679_1000089611 | 3300025945 | Corn Rhizosphere | MLLDPVLWVFVLAAALLVVAVVGVVIATRRACQGQPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGAPTSRLTR |
Ga0207658_112898761 | 3300025986 | Switchgrass Rhizosphere | MLLDPVLWVFVLAAALLVVAVVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRAEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGAPTSRLTR |
Ga0209438_11661222 | 3300026285 | Grasslands Soil | MLMDPVLWLFVLSVGLLVAGVLGVVVATRRARQSERQGVPGVSSDLGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLGRLAVL |
Ga0257162_10363371 | 3300026340 | Soil | GDAPPGGTKLLDPGRGRLFAMLMDPVLWLFVLSVGLLVAGVLGVVVATRRARQSERQGVPGVSSDLGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLGRLAVLLDQADRAAARAPTSRATR |
Ga0257180_10097481 | 3300026354 | Soil | APPGGTKLLDPGRGRLFAMLMDPVLWLFVLSVGLLVAGVLGVVVATRRARQSERQGVPGVSSDLGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLGRLAVLLDQADRAAARAPTSRATR |
Ga0257179_10111161 | 3300026371 | Soil | APPGGTKLLDPGRGRLFAMLMDPVLWLFVLSVGLLVAGVLGVVVATRRARQSERQGVPGVSSDLGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLARLAVLLEQANRAAAVAPTSRAPR |
Ga0257155_10087633 | 3300026481 | Soil | MLLDPVLWLFVLSVGLLVVGVLGVVVATRRARLSERQGVPGVSPDVGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLGRLAVLLDQADRAAARAPTSRATR |
Ga0257157_10043463 | 3300026496 | Soil | MLLDPVLWLFVLSVGLLVVGVLGVVVATRRARLSERQGVPGVSPDVGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLARLAVLLEQADRTAAGTSTSRVAR |
Ga0257157_10921552 | 3300026496 | Soil | LLVAGVLGVVVATRRARQSERQGVPGVSSDLGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLGRLAVLLDQADRAAARAPTSRATR |
Ga0257168_10000536 | 3300026514 | Soil | MLVDPVLWLFVLSVGLLVVGVLGVVVATRRARQSERQGVPGVSPALGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLARLAVLLEQANRAAAVAPTSRAPR |
Ga0209648_100109286 | 3300026551 | Grasslands Soil | MLVDPVLWLFVLSVGLLVVGVLGVVVATRRARQSERQGVPGVSRALGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLARLAVLLEQANRAAAVAPTSRAPR |
Ga0209177_100006691 | 3300027775 | Agricultural Soil | RGSGETALRAPAGGRLFAMLLAPVLWVFVLAAALLVVAGVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVPGAPTSRLTR |
Ga0209068_100068635 | 3300027894 | Watersheds | MLLLDPVLWLFVLSVGLLVVGVLGVVVATRRARQSERMGVPGVTPDVGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLARLAVLLEQVDRAAAGAPTSRAAR |
Ga0209526_101630061 | 3300028047 | Forest Soil | PGRPRAYRTMAPGPARGRLFAMLLDPVLWLFVLSVGLLVVGVLGVVVATRRARRGERLGLPGIEPDLGSDFARIHELNTEVKRLGDECDRLLAERDELETVLNRLALLLERADRAAAGIPASHRR |
Ga0209526_102933422 | 3300028047 | Forest Soil | MLLDPVLWLFVLSVGLLVVGVLGVVVATRRARLSERQGAPGVSPDVGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLARLAVLLEQADRTAAGTSTSRAAR |
Ga0268264_101225424 | 3300028381 | Switchgrass Rhizosphere | MLLDPVLWVFVLAAALLVVAVVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGAP |
Ga0307284_101518242 | 3300028799 | Soil | MLLDPVLWLFVLSVGLLVAGVLGVVVATRRARQSERQGMPGVSPDLGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLARLSVLLEQADRAGAGTSTS |
Ga0307304_103632922 | 3300028885 | Soil | LLVAGVLGVVVATRRARQSERQGMPGVSPDLGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLARLSVLLEQADRAGAGTSTSRVAR |
Ga0247827_105374891 | 3300028889 | Soil | LRAPAGGRLFAMLLDPVLWVFVLAAALLVVAVVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGAPTSRLTR |
Ga0247826_103364073 | 3300030336 | Soil | LVVAVVGVVIATRRARQGEPLELPGLVPADQSSDFSRLHELRTEVKRLGDECDRLVAERDEMEAVLNRLAVLLERADRAVQGAPTSRLTR |
(restricted) Ga0255311_10160533 | 3300031150 | Sandy Soil | MLLDPVFWLFVLSVGLLLVGVLGVVVATRRARKSEQLGLPGVSPDLGSDFARIHELQTQVKQLGDEYDRLLAERDELEAVLTRLAGLLEQADRAAAGLAASAPPHAGHRATR |
(restricted) Ga0255310_100186953 | 3300031197 | Sandy Soil | MLLDPVFWLFVLSVGLLLVGVLGVVVATRRARKSEQLGLPGVSPDLGSDFVRIHELQTQVKRLGDEYDRLLAERDELEAVLTRLAGLLEQADRAAAGLAAAAPDHAGHRVTR |
Ga0307469_103366582 | 3300031720 | Hardwood Forest Soil | MLMDPVLWLFVLSVGLLVAGVLGVVVATRRARQSERQGVPGVSSDLGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLGRLAVLLDQADRAAAPTSRATR |
Ga0307469_108952431 | 3300031720 | Hardwood Forest Soil | MLLDPVLWLFVLSVGLVVVGVLGVVVATRRARRGERLGLPGIEPDLGSDFARIHELNTEVKRLGDECDRLLAQRDELEAVLNRLAVLLERADRAAAGIPASHGR |
Ga0307473_109053781 | 3300031820 | Hardwood Forest Soil | MLLDPVLWLFVLSVGLLVVGVLGVIVATRRARRGERLGLSGIEPDLGSDFARIHELNTEVKRLGDECDRLLAERDELEAVLNRLAVLLERADRAAAGIPSSHGR |
Ga0310884_103774301 | 3300031944 | Soil | MLLDPVLWLFVLSVGLLVVGVLGVVVATRRARRSEQQGVPGVTPDLGSDFARIHELQTQVKRLGDEYDRLLVERDELEAVLTRLAALLEQA |
Ga0307479_100961902 | 3300031962 | Hardwood Forest Soil | MLLDPVLWLFVLSVGLLVVGVLGVVVATRRARRGERLGLPGIAPELGSEFARIHELNTEVKRLGDECDRLLAERDELEAVLNRLAVLLERADRAAAGIPTSHGR |
Ga0307470_103913321 | 3300032174 | Hardwood Forest Soil | MLMDPVLWLFVLSVGLLVAGVLGVVVATRRARQSERQGVPGVSSDLGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLGRLAVLLDQ |
Ga0307470_107007112 | 3300032174 | Hardwood Forest Soil | MLLDPVLWLFVLSVGLLVVGLLGVVVATRRARLSERQGVPGVSPDVGSDFARIHELQTQVKQLGDEYDRLAAERDELEAVLARLAVLLEQADRAAPGASTSRAAR |
Ga0307470_114241301 | 3300032174 | Hardwood Forest Soil | LFAMLLDPVLWLFVLSVGLVVVGVLGVVVATRRARRGERLGLPGIEPDLGSEFARIHELNTEVKRLGDECDRLLAERDELEAVLNRLAVLLERADRAAAGIPASHGR |
Ga0307471_1002725922 | 3300032180 | Hardwood Forest Soil | MLLDPVLWLFVLSVGLLVVGVLGVIVATRRARRGERLGLPGIEPDLGSDFARIHELNTEVKRLGDECDRLLAERDELEAVLNRLAVLLERADRAAAGIPASHGR |
Ga0307472_1011339372 | 3300032205 | Hardwood Forest Soil | MLLDPVLWLFVLSVGLLVVGVLGVIVATRRARRGERLGLSGIEPDLGSDFARIHELNTEVKRLGDECDRLLAERDELEAVLNRLAVLLERADRAAAGIPASHGR |
Ga0335070_110471022 | 3300032829 | Soil | PRGRLSAMLLDPVFWLFVLSVGLLAVGVLGVVVATRRARQNEQLGLPGVSPDLGSDFARIHELQTQVKRLGDEYDRLLAERDELEAVLSRLAGLLEQADRAAAGLAASAPGHPGRVTRVT |
Ga0326729_10016351 | 3300033432 | Peat Soil | MLLDPVFWLFVLSVGLLVVGVLGVVVATRRARKSEQLGLPGVSPDLGSDFARIHELQTQVKRLGDEYDRLLAERDELEAVLTRLAGLLEQVDRTAAGLAASAADHAGHRVTRVTR |
Ga0326726_1000351912 | 3300033433 | Peat Soil | MLLDPVFWLFVLSVALLVVGVLGVVVATRRARQSERLGVPGVSPDLGSDFARIHELQTQVKRLGDEYDRLLAERDELETVLTRLAVLLEQADRAAAGLPTSTPEHAGRTTR |
Ga0316620_117824251 | 3300033480 | Soil | RPAVPPPRPAPAGSARLPGPARGRLFAMLLDPVFWLFVLSVGLLVVGVLGVVVATRRARQNERLGVPGVSPDLGSDFTRIHELQTQVKRLGDEYDRLLAERDELETVLTRLAVLLEQADRAAAGLPTSTPEHAGRTTR |
Ga0316628_1002258355 | 3300033513 | Soil | MLLDPVFWLFVLSVALLVIGVLGVVVATRRARRNERLGVPGMSPDLGSDFARIHELQTQVKRLGDEYDRLLAERDELETVLTRLAVLLEQADRAAAGLPTSTPEHAGRTTR |
Ga0316628_1006027383 | 3300033513 | Soil | MLLDPVFWLFVLSVGLLLVGVLGVVVATRRARQNERLGVPGVSPDLGSDFARIHELQTQVKRLGDEYDRLLAERDELEAVLTRLAGLLEQADRAAAGLAASAPGHPGRVTRVTR |
Ga0373958_0116787_285_629 | 3300034819 | Rhizosphere Soil | MLLDPVFWLFVLSVGLLVVGVLGVVVATRRARQSERLGVPGVSPDVGSDFARIHELQTQVKRLGDEYDRLLVERDELEAVLTRLAALLEQADRAAAGLAASAPQPAGRLTRVTR |
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