Metagenome Family F059295

Basic Information
Family ID	F059295
Family Type	Metagenome
Number of Sequences	134
Average Sequence Length	74 residues
Representative Sequence	VAAMGAVVYAAFFAALIAMPIYGGAAYDKNGYQPFKAPIPIFAKKWDANITAFSIQLVILVAGILTVSGAVAG
Number of Associated Samples	124
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.24 %
% of genes near scaffold ends (potentially truncated)	96.27 %
% of genes from short scaffolds (< 2000 bps)	88.81 %
Associated GOLD sequencing projects	119
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Most Common Taxonomy
Group	Bacteria (78.358 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (14.925 % of family members)
Environment Ontology (ENVO)	Unclassified (26.866 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (39.552 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 48.51% β-sheet: 0.00% Coil/Unstructured: 51.49%
Feature Viewer

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Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF01970	TctA	64.18
PF02417	Chromate_transp	5.22
PF07331	TctB	4.48
PF09364	XFP_N	0.75
PF01751	Toprim	0.75
PF07287	AtuA	0.75
PF00149	Metallophos	0.75
PF13379	NMT1_2	0.75
PF02274	ADI	0.75
PF00303	Thymidylat_synt	0.75
PF04386	SspB	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG1784	TctA family transporter	General function prediction only [R]	64.18
COG3333	TctA family transporter	General function prediction only [R]	64.18
COG2059	Chromate transport protein ChrA	Inorganic ion transport and metabolism [P]	5.22
COG0207	Thymidylate synthase	Nucleotide transport and metabolism [F]	0.75
COG1834	N-Dimethylarginine dimethylaminohydrolase	Amino acid transport and metabolism [E]	0.75
COG2235	Arginine deiminase	Amino acid transport and metabolism [E]	0.75
COG2969	Stringent starvation protein B, binds SsrA peptide	Posttranslational modification, protein turnover, chaperones [O]	0.75
COG4874	Uncharacterized conserved protein	Function unknown [S]	0.75

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	78.36 %
Unclassified	root	N/A	21.64 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	78.36 %
Unclassified	root	N/A	21.64 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	78.36 %
Unclassified	root	N/A	21.64 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	73.13 %
Unclassified	root	N/A	21.64 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	71.64 %
Unclassified	root	N/A	21.64 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	69.40 %
Unclassified	root	N/A	21.64 %
Holosporales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Holosporales	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.64 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	5.97 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5.97 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.75 %
Caedimonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Holosporales → Caedimonadaceae	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.64 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	5.97 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.49 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.75 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.75 %
Caedimonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Holosporales → Caedimonadaceae	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.64 %
unclassified Pseudolabrys	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys	5.97 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.75 %
unclassified Afipia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia	0.75 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.75 %
Caedimonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Holosporales → Caedimonadaceae	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.64 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	2.99 %
Pseudolabrys sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	2.99 %
Bradyrhizobium sp. DOA9	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. DOA9	0.75 %
Afipia sp. Root123D2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp. Root123D2	0.75 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.75 %
Caedimonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Holosporales → Caedimonadaceae	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908039\|B3_v_NODE_56379_len_3844_cov_12_459157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp. Root123D2	3894	Open in IMG/M
3300003369\|JGI24140J50213_10001021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	12584	Open in IMG/M
3300003369\|JGI24140J50213_10077998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1128	Open in IMG/M
3300004071\|Ga0055486_10004769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1769	Open in IMG/M
3300004114\|Ga0062593_101744453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	682	Open in IMG/M
3300004463\|Ga0063356_104771590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	583	Open in IMG/M
3300004480\|Ga0062592_101562700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	636	Open in IMG/M
3300005161\|Ga0066807_1033828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	563	Open in IMG/M
3300005168\|Ga0066809_10220657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	519	Open in IMG/M
3300005330\|Ga0070690_100627227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	819	Open in IMG/M
3300005332\|Ga0066388_100039232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4644	Open in IMG/M
3300005332\|Ga0066388_107895270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	532	Open in IMG/M
3300005333\|Ga0070677_10816037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	534	Open in IMG/M
3300005340\|Ga0070689_100863997	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	799	Open in IMG/M
3300005366\|Ga0070659_101279255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	650	Open in IMG/M
3300005440\|Ga0070705_100255854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1232	Open in IMG/M
3300005532\|Ga0070739_10058065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2442	Open in IMG/M
3300005539\|Ga0068853_100299662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1485	Open in IMG/M
3300005618\|Ga0068864_101788369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	620	Open in IMG/M
3300005718\|Ga0068866_10177082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1257	Open in IMG/M
3300005764\|Ga0066903_100615232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1887	Open in IMG/M
3300005834\|Ga0068851_10055182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2024	Open in IMG/M
3300005995\|Ga0066790_10261177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	739	Open in IMG/M
3300006047\|Ga0075024_100138365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1100	Open in IMG/M
3300006172\|Ga0075018_10855267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	502	Open in IMG/M
3300006354\|Ga0075021_10808877	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300006642\|Ga0075521_10652018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	519	Open in IMG/M
3300006804\|Ga0079221_10508996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	784	Open in IMG/M
3300006806\|Ga0079220_11840843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	535	Open in IMG/M
3300006806\|Ga0079220_11977380	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	519	Open in IMG/M
3300006852\|Ga0075433_10478887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1096	Open in IMG/M
3300006854\|Ga0075425_100079437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3707	Open in IMG/M
3300006871\|Ga0075434_100779468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	973	Open in IMG/M
3300007076\|Ga0075435_100376311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1219	Open in IMG/M
3300007076\|Ga0075435_101431161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	606	Open in IMG/M
3300009092\|Ga0105250_10168205	Not Available	917	Open in IMG/M
3300009093\|Ga0105240_10141674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	2874	Open in IMG/M
3300009101\|Ga0105247_10292144	Not Available	1128	Open in IMG/M
3300009167\|Ga0113563_12125941	Not Available	673	Open in IMG/M
3300009168\|Ga0105104_10053922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	2187	Open in IMG/M
3300009174\|Ga0105241_12012148	Not Available	569	Open in IMG/M
3300009545\|Ga0105237_11870877	Not Available	608	Open in IMG/M
3300009649\|Ga0105855_1157447	All Organisms → cellular organisms → Bacteria → Proteobacteria	663	Open in IMG/M
3300010046\|Ga0126384_10912944	Not Available	794	Open in IMG/M
3300010046\|Ga0126384_12071754	Not Available	545	Open in IMG/M
3300010371\|Ga0134125_11713105	Not Available	684	Open in IMG/M
3300010396\|Ga0134126_11515765	Not Available	739	Open in IMG/M
3300010398\|Ga0126383_10218948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. DOA9	1843	Open in IMG/M
3300010399\|Ga0134127_11279490	Not Available	802	Open in IMG/M
3300011428\|Ga0137456_1202621	Not Available	537	Open in IMG/M
3300011433\|Ga0137443_1070103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	979	Open in IMG/M
3300012476\|Ga0157344_1016724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	595	Open in IMG/M
3300012477\|Ga0157336_1001850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1141	Open in IMG/M
3300012489\|Ga0157349_1019068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	633	Open in IMG/M
3300012491\|Ga0157329_1047461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	500	Open in IMG/M
3300012510\|Ga0157316_1036872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	620	Open in IMG/M
3300012511\|Ga0157332_1001483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1582	Open in IMG/M
3300012882\|Ga0157304_1048861	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	645	Open in IMG/M
3300012891\|Ga0157305_10054376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	869	Open in IMG/M
3300012892\|Ga0157294_10000545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	4267	Open in IMG/M
3300012892\|Ga0157294_10044329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	986	Open in IMG/M
3300012893\|Ga0157284_10003633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	2492	Open in IMG/M
3300012903\|Ga0157289_10270594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	588	Open in IMG/M
3300012904\|Ga0157282_10000115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	9136	Open in IMG/M
3300012960\|Ga0164301_11882801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	505	Open in IMG/M
3300012984\|Ga0164309_10785709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	765	Open in IMG/M
3300012985\|Ga0164308_10769178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	837	Open in IMG/M
3300012986\|Ga0164304_10595128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	824	Open in IMG/M
3300012987\|Ga0164307_11869132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	509	Open in IMG/M
3300012988\|Ga0164306_10391280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1042	Open in IMG/M
3300013092\|Ga0163199_1196013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	793	Open in IMG/M
3300013096\|Ga0157307_1055647	Not Available	751	Open in IMG/M
3300013104\|Ga0157370_10729154	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300013306\|Ga0163162_12312447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	618	Open in IMG/M
3300013307\|Ga0157372_11642143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	740	Open in IMG/M
3300014325\|Ga0163163_10836921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	984	Open in IMG/M
3300014968\|Ga0157379_10194330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1834	Open in IMG/M
3300015373\|Ga0132257_100717870	Not Available	1243	Open in IMG/M
3300015373\|Ga0132257_102225093	Not Available	710	Open in IMG/M
3300015373\|Ga0132257_104043836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	533	Open in IMG/M
3300015374\|Ga0132255_102405357	Not Available	804	Open in IMG/M
3300017792\|Ga0163161_10247859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1387	Open in IMG/M
3300017927\|Ga0187824_10372219	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300018075\|Ga0184632_10402116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	575	Open in IMG/M
3300018083\|Ga0184628_10107657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1436	Open in IMG/M
3300019867\|Ga0193704_1052094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	799	Open in IMG/M
3300019879\|Ga0193723_1158178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	601	Open in IMG/M
3300021344\|Ga0193719_10179557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	908	Open in IMG/M
3300023168\|Ga0247748_1002388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2208	Open in IMG/M
3300023270\|Ga0247784_1180696	Not Available	552	Open in IMG/M
3300025878\|Ga0209584_10369567	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300025899\|Ga0207642_10137214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1284	Open in IMG/M
3300025904\|Ga0207647_10816355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	501	Open in IMG/M
3300025912\|Ga0207707_11030766	Not Available	674	Open in IMG/M
3300025917\|Ga0207660_10151210	Not Available	1784	Open in IMG/M
3300025923\|Ga0207681_11431645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	580	Open in IMG/M
3300025926\|Ga0207659_10180144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1674	Open in IMG/M
3300025927\|Ga0207687_10510826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1004	Open in IMG/M
3300025932\|Ga0207690_11539167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	556	Open in IMG/M
3300025936\|Ga0207670_10123323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	1887	Open in IMG/M
3300025936\|Ga0207670_11679912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	540	Open in IMG/M
3300025944\|Ga0207661_10856287	Not Available	837	Open in IMG/M
3300025945\|Ga0207679_10559807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1027	Open in IMG/M
3300026793\|Ga0207441_107057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	505	Open in IMG/M
3300026806\|Ga0207546_103900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	551	Open in IMG/M
3300026841\|Ga0207490_1001561	Not Available	954	Open in IMG/M
3300026905\|Ga0207516_1012811	Not Available	665	Open in IMG/M
3300027326\|Ga0209731_1041722	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300027430\|Ga0207561_100206	Not Available	1398	Open in IMG/M
3300027432\|Ga0209421_1008427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1935	Open in IMG/M
3300027773\|Ga0209810_1148021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	983	Open in IMG/M
3300027787\|Ga0209074_10555270	Not Available	506	Open in IMG/M
3300027821\|Ga0209811_10028077	Not Available	1865	Open in IMG/M
3300027842\|Ga0209580_10339087	All Organisms → cellular organisms → Bacteria → Proteobacteria	749	Open in IMG/M
3300027876\|Ga0209974_10020641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	2183	Open in IMG/M
3300027909\|Ga0209382_12307865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	505	Open in IMG/M
3300028381\|Ga0268264_10745578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	975	Open in IMG/M
3300028796\|Ga0307287_10143166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	908	Open in IMG/M
3300029939\|Ga0311328_10537771	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300029953\|Ga0311343_10693827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Holosporales → Caedimonadaceae	852	Open in IMG/M
3300031231\|Ga0170824_105687493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	507	Open in IMG/M
3300031538\|Ga0310888_10753438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	600	Open in IMG/M
3300031538\|Ga0310888_10863978	Not Available	563	Open in IMG/M
3300031726\|Ga0302321_101633204	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300031892\|Ga0310893_10402906	Not Available	599	Open in IMG/M
3300031913\|Ga0310891_10267800	Not Available	594	Open in IMG/M
3300032061\|Ga0315540_10372159	Not Available	577	Open in IMG/M
3300032211\|Ga0310896_10533607	Not Available	647	Open in IMG/M
3300032516\|Ga0315273_10317453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	2113	Open in IMG/M
3300032892\|Ga0335081_10780080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1145	Open in IMG/M
3300033004\|Ga0335084_10720221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1016	Open in IMG/M
3300033475\|Ga0310811_10486168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1301	Open in IMG/M
3300033810\|Ga0314872_017837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	603	Open in IMG/M
3300034195\|Ga0370501_0004504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3565	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	69.40%
Host-Associated	Host-Associated	30.60%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	58.96%
Plants	Host-Associated → Plants	30.60%
Aquatic	Environmental → Aquatic	10.45%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.67%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.18%
Sediment	Environmental → Aquatic → Sediment	5.22%
Freshwater	Environmental → Aquatic → Freshwater	3.73%
Peat	Environmental → Terrestrial → Peat	2.24%
Marine	Environmental → Aquatic → Marine	1.49%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.75%
Roots	Host-Associated → Plants → Roots	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.79%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.19%
Loam	Environmental → Terrestrial → Soil → Loam	9.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.22%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.48%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.99%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.24%
Lake	Environmental → Aquatic → Freshwater → Lake	1.49%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.49%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.75%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.75%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.75%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.75%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.19%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.22%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.48%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.73%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.73%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.99%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.24%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.49%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.75%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.75%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.75%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.75%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.75%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	0.75%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.75%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.75%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.22%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.73%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.99%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.99%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.99%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.99%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.99%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	2.99%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.24%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.24%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.24%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.24%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.24%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.24%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.24%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.24%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.49%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.49%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.49%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.49%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.49%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.49%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.49%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.49%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.49%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.49%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.49%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.49%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.75%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.75%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.75%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.75%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.75%
Salt Marsh Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment	0.75%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.75%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.75%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.75%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.75%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.75%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.75%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908039	Soil microbial communities from permafrost in Bonanza Creek, Alaska, sample from Bog Site B4	Environmental	Open in IMG/M
3300003369	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 002-22A	Environmental	Open in IMG/M
3300004071	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqB_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005161	Soil and rhizosphere microbial communities from Laval, Canada - mgLPA	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005532	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009649	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-059	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011428	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT615_2	Environmental	Open in IMG/M
3300011433	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT300_2	Environmental	Open in IMG/M
3300012476	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.6.yng.070610	Host-Associated	Open in IMG/M
3300012477	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.3.yng.040610	Host-Associated	Open in IMG/M
3300012489	Unplanted soil (control) microbial communities from North Carolina - M.Soil.5.yng.040610	Environmental	Open in IMG/M
3300012491	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.8.old.040610	Host-Associated	Open in IMG/M
3300012510	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.9.old.080610	Host-Associated	Open in IMG/M
3300012511	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_10	Environmental	Open in IMG/M
3300012882	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2	Environmental	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013092	Freshwater microbial communities from Powell Lake, British Columbia, Canada to study Microbial Dark Matter (Phase II) - PL_2010_150m	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300023168	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S064-202C-5	Environmental	Open in IMG/M
3300023270	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L169-409R-5	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026793	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G06A3a-12 (SPAdes)	Environmental	Open in IMG/M
3300026806	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G06A4a-10 (SPAdes)	Environmental	Open in IMG/M
3300026841	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G06A3a-10 (SPAdes)	Environmental	Open in IMG/M
3300026905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A4-10 (SPAdes)	Environmental	Open in IMG/M
3300027326	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027430	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A1-10 (SPAdes)	Environmental	Open in IMG/M
3300027432	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027773	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300029939	I_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029953	II_Bog_E3 coassembly	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300032061	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-10	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300033810	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SR_E	Environmental	Open in IMG/M
3300034195	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B3_v_00018150	2124908039	Soil	RLYLVALMGAIVYAAFFAALIAMPIYGGAAYDKNGYQPFNAPVPLFAKKWDANITAFSIQLVILAAGILTVTGAFAG
JGI24140J50213_1000102114	3300003369	Arctic Peat Soil	AIVYAAFFAALIAMPIYGGAAYDKNGYQPFNAPVPLFAKKWDANITAFSIQLVILAAGILTVTGAFAG*
JGI24140J50213_100779981	3300003369	Arctic Peat Soil	LMGAIVYAAFFAALIAMPIYGGAAYDKNGYQPFKAPIPLFAKKWDANITAFSIQLVILAAGILTVTGAFTG*
Ga0055486_100047694	3300004071	Natural And Restored Wetlands	LALERIYLVALIGIVCYTAFFVAVFAMPIYGDGAHDDNSYLPFKAPIPLIADKQDVNITVFSIQLVILAAGLLTVAA*
Ga0062593_1017444532	3300004114	Soil	AFFAALIAMPIYGGAAYDKNGYQPFNAPIPIFAKKWDANITAFSIQLVILVAGILTVSGATAG*
Ga0063356_1047715901	3300004463	Arabidopsis Thaliana Rhizosphere	ERLYFVAAMGAVVYAAFFAALIAMPIYGGAAYDKNGYQPFNAPIPIFSKKWDANITAFSIQLVILAAGIVAVSGAFAG*
Ga0062592_1015627001	3300004480	Soil	ERLYFVAAMGAVVYAAFFAALIAMPIYGGGAYDKNGYQPFNAPIPIFAKKWDANITAFSIQLLILVAGLLTVSGAIVG*
Ga0066807_10338281	3300005161	Soil	IWWPGPLAVERLYLVAAMGAVVYAAFFAALIAMPIYGGAAYDKNGYQPFKAPIPIFAKKWDANITAFSIQLVILVAGILTVSGAVAG*
Ga0066809_102206572	3300005168	Soil	WWPGPLAVERLYFVAAMGAVVYAAFFAALIAMPIYGGGAYDKNGYQPFNAPIPIFAKKWDANITAFSIQLLILVAGLLTVSGAIAG*
Ga0070690_1006272271	3300005330	Switchgrass Rhizosphere	ERLYFVAAMGAVVYAAFFAALIAMPIYGGGAYDKNGYQPFNAPIPIFAKKWDANITAFSIQLVILVAGILTVSGAIAG*
Ga0066388_1000392321	3300005332	Tropical Forest Soil	FGALIAMPVYGGAAYDKNGYQPFNAPIPIFAKKWDANITVFSIQLVILAAGLVAVTR*
Ga0066388_1078952702	3300005332	Tropical Forest Soil	VALMGAIVYAAFFAALVAMPIYGGAAYDRNGYQPFKAPLPIIAEKWDANITIFSIQLVILAAGLLAVGGASAG*
Ga0070677_108160372	3300005333	Miscanthus Rhizosphere	VAAMGAVVYAAFFAALIAMPIYGGAAYDKNGYQPFKAPIPIFAKKWDANITAFSIQLVILVAGILTVSGAVAG*
Ga0070689_1008639971	3300005340	Switchgrass Rhizosphere	AMGAVVYAAFFAALIAMPIYGGGAYDKNGYQPFNAPIPIFAKKWDANITAFSIQLVILVAGILTVSGAIAG*
Ga0070659_1012792552	3300005366	Corn Rhizosphere	AAFFVALIAMPIYGGAAYDKNGYQPFNAPIPIFAKKWDGNITVFSIQLVILIAGILTVSGAIAG*
Ga0070705_1002558542	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	AMGAVVYAAFFAALIAMPIYGGGAYDKNGYQPFNAPIPIFAKKWDANITAFSIQLLILVAGLLTVSGAIVG*
Ga0070739_100580651	3300005532	Surface Soil	LTWWPGPLAAERLWLVAAMAFIVYAAFFVAAFTMPVYGGAAYDSNGYKPFTPPVPIIARKWDVNITAFAVQVVLLAGGLAALVAAG*
Ga0068853_1002996622	3300005539	Corn Rhizosphere	YAAFFAALIAMPIYGGAAYDKNGYQPFKAPIPIFAKKWDANITAFSIQLVILVAGILTVSGAVAG*
Ga0068864_1017883691	3300005618	Switchgrass Rhizosphere	VAAMGAVVYAAFFAALIAMPIYGGAAYDKNGYQPFKAPIPIFAKKWDANITAFSVQLVILVAGILTVSGAIAG*
Ga0068866_101770822	3300005718	Miscanthus Rhizosphere	GPLAVERLYLVAAMGAVVYAAFFAALIAMPIYGGAAYDKNGYQPFKAPIPIFAKKWDANITAFSIQLVILVAGILTVSGAVAG*
Ga0066903_1006152321	3300005764	Tropical Forest Soil	FGALIAMPVYGGAAYDKNGYQPFNAPIPIFAKKWDANITVFSIQLVILAAGLVAVTRQPK
Ga0068851_100551821	3300005834	Corn Rhizosphere	VAAMGAVVYAAFFAALIAMPIYGGGAYDKNGYQPFNAPVPIFAKKWDANITAFSIQLLILVAGLLTVSGAFAG*
Ga0066790_102611771	3300005995	Soil	ERLYLVALMGAIVYAAFFAALIAMPIYGGAAYDKNGYQPFKAPIPLFAKKWDANITAFSIQLVILAAGILTVTGAFTG*
Ga0075024_1001383651	3300006047	Watersheds	GFGLLAFALIWWPGPLALERLYLVAVMGVIVYAAFFAALVAMPVYGGAAYDKNGYKPFKAPIPIISKTWDLNITAFSIQVLLLAAGIAAVTR*
Ga0075018_108552672	3300006172	Watersheds	AFFAALIAMPVYGGAAYDKNGYRPFKAPVPIIAKKWDANVTIFSIQLVILAAGLLAVTGAFAR*
Ga0075021_108088773	3300006354	Watersheds	VAGPLALERLYLVAVMSAIVYAAFLVAVLAMPIYGGKAYDNNGYKPFLAPVPLIAKKWDVNITIFCIQVVILAAGIVAVCA*
Ga0075521_106520182	3300006642	Arctic Peat Soil	VWQINSYVGLGLLALALIWWPGQLALERLYLVAIMATIVYLAFFVAVLAMPVYGGRAYDTNGYKPFGAPVPVIAKKWDVNITIFSIQVALLAAGVLALAT*
Ga0079221_105089962	3300006804	Agricultural Soil	VVYAAFFAALMAMPIYGGAAYDKNGYKPFDAPVPVFAKKWDANITAFSIQLLILLAGILTVSGAIAG*
Ga0079220_118408431	3300006806	Agricultural Soil	FALIWWPGALALERLYLVATMSVIVYAAFFGALIAMPIYGGSAFDKNGYKPFKAPVPIISKAWDVNITAFSIQVLLLAGGIAAVTR*
Ga0079220_119773801	3300006806	Agricultural Soil	IYAAFFIALAAMPLYGGRAYDTNGYKPFKAPIPIIAKRWDANITAFSIQLIILAAGITAVTR*
Ga0075433_104788871	3300006852	Populus Rhizosphere	ALIWWPGPLAVERLYLVAAMGAVVYAAFFAALIAMPIYGGAAYDKNGYQPFKAPIPIFAKKWDANITAFSIQLVILVAGILTVSGAVAG*
Ga0075425_1000794375	3300006854	Populus Rhizosphere	PGPFAAERLYFVAAMGAVIYAAFFAALIAMPIYGGAAYDKNGYEPFDAPIPIFAKKWDANITAFSIQLVILAAGILTVSGA*
Ga0075434_1007794681	3300006871	Populus Rhizosphere	LIAMPIYGGAAYDKNGYQPFKAPIPIFAKKWDANITAFSIQLVILVAGILTVSGAVAG*
Ga0075435_1003763111	3300007076	Populus Rhizosphere	GAIVYAAFFAALIAMPIYGGAAYDRNGYQPFKAPLPIFAKRWDANITAFSIQLVILAAGLLAVSGASAG*
Ga0075435_1014311611	3300007076	Populus Rhizosphere	FAALIAMPIYGGAAYDKNGYEPFDAPIPIFAKKWDANITAFSIQLVILAAGILTVSGA*
Ga0105250_101682052	3300009092	Switchgrass Rhizosphere	GAVVYAAFFAALIAMPIYGGGAYDKNGYQPFNAPVPIFAKKWDANITAFSIQLLILVAGLLTVSGAIAG*
Ga0105240_101416741	3300009093	Corn Rhizosphere	FFIALFMMPIYGGTAYDTNGYRPFDAPVPIIARKWDANITAFSVQIVLLIAGVASLLAAR
Ga0105247_102921442	3300009101	Switchgrass Rhizosphere	VYAAFFAALIAMPIYGGGAYDKNGYQPFNAPIPIFAKKWDANITAFSIQLVILVAGILTVSGAIAG*
Ga0113563_121259412	3300009167	Freshwater Wetlands	PIYGGKAYDSNGYKPFPAPVPLIAKTWDVNITIFCVQVVILAAGIVAAIV*
Ga0105104_100539222	3300009168	Freshwater Sediment	LLCRFFAALIAMPIYGGAAYDRNGYQPFKAPLPIFAKSWDANITAFSVQLVILAAGLLAVSGASAG*
Ga0105241_120121482	3300009174	Corn Rhizosphere	AAFFGALIAMPLYGGAAYDKNGYEPFNAPIPIIAKKWDANVTIFSIQLVFLAGGLLAVTGVFIR*
Ga0105237_118708771	3300009545	Corn Rhizosphere	YAAFFAALIAMPIYGGGAYDKNGYQPFNAPVPIFAKKWDANITAFSIQLLILVAGLLTVSGAFAG*
Ga0105855_11574472	3300009649	Permafrost Soil	LVAMPVYRGAAYDQNGYKPFPAPVPLIAKKWDANITIFCVQVALLAAGTIAIGA*
Ga0126384_109129441	3300010046	Tropical Forest Soil	GLLAFALIWWPGALAVERLYLVALMSAIVYAAFFGALIAMPVYGGAAYDKNGYQPFNAPIPIFAKKWDANITVFSIQLVILAAGLVAVTR*
Ga0126384_120717541	3300010046	Tropical Forest Soil	QISSYVGFGLLAFALIWWPGPLAVERLYLVALMSGIVYAAFFGALIAMPVYGGAAYDKNGYQPFNAPIPIIAKKWDANVTIFSVQLVILAAGLLAVAR*
Ga0134125_117131051	3300010371	Terrestrial Soil	GPLAVERLYLVALMSAIVYAAFFGALIAMPLYGGAAYDKNGYEPFNAPIPIIAKKWDANVTIFSIQLVFLAGGLLAVTGVFIR*
Ga0134126_115157651	3300010396	Terrestrial Soil	RLYLVAAFAVIIYAAFFIALIAMPVYGGRAYDTNGYKPFKAPIPIIAKKWDANITAFSIQLIILAAGIAAVTR*
Ga0126383_102189482	3300010398	Tropical Forest Soil	VGFGLLALALIWWPGPLALERLYLVAAMSAIVYTAFFVALIAMPIYGGAAYDANGYQPFKAPVPIFAKKWDANITAFSVQLVILAGGMIAVMR*
Ga0134127_112794901	3300010399	Terrestrial Soil	AFALIWWPGPLAVERLYFVAAMGAVVYAAFFAALIAMPIYGGAAYDKNGYQPFNAPIPIFAKKWDANITAFSIQLVILVAGILTVSGATAG*
Ga0137456_12026211	3300011428	Soil	YGGGAYDTNGYKPFAAPVPLFAKKWDVNITIFCVQVMLLAGGIVAVTQ*
Ga0137443_10701032	3300011433	Soil	YVGFGLLALALIWRPGPLGLERLFLVAVMGAIVYAAFFTAVFAMPVYGGAAYDKNGYQPFAAPVPLFAKKWDVNITVFCIQVALLAGGIVALCA*
Ga0157344_10167242	3300012476	Arabidopsis Rhizosphere	AFALIWWPGPLAVERLYFVAAMGAVVYAAFFAALIAMPIYGGAAYDKNGYQPFKAPIPIFAKKWDANITAFSIQLVILVAGILTVSGAVAG*
Ga0157336_10018501	3300012477	Arabidopsis Rhizosphere	RLYFVAAMGAVVYAAFFAALIAMPIYGGAAYDKNGYQPFKAPIPIFAKKWDANITAFSIQLVILVAGILTVSGAVAG*
Ga0157349_10190681	3300012489	Unplanted Soil	GVLAFALIWWPGPLAVERLYFVAAMGAVVYAAFFAALIAMPIYGGAAYDKNGYQPFKAPIPIFAKKWDANITAFSIQLVILVAGILTVSGAVAG*
Ga0157329_10474611	3300012491	Arabidopsis Rhizosphere	ERLYFVAAMGAVVYAAFFAALIAMPIYGGAAYDKNGYQPFKAPIPIFAKKWDANITAFSIQLVILVAGILTVSGAVAG*
Ga0157316_10368721	3300012510	Arabidopsis Rhizosphere	IVYAAFFGALIAMPLYGGAAYDKNGYEPFNAPIPIIAEKWDANVTIFSIQLVFLAGGLLAVTGVFTR*
Ga0157332_10014832	3300012511	Soil	AAMGAVVYAAFFAALIAMPIYGGAAYDKNGYQPFKAPIPIFAKKWDANITAFSIQLVILVAGILTVSGAVAG*
Ga0157304_10488611	3300012882	Soil	AALIAMPIYGGAAYDKNGYQPFKAPIPIFAKKWDANITAFSIQLVILVAGILTVSGAVAG
Ga0157305_100543761	3300012891	Soil	YAAFFAALITMPIYGGAAYDKNGYQPFKAPIPIFAKKWDANITAFSIQLVILVAGILTVSGAVAG*
Ga0157294_100005451	3300012892	Soil	PGPLAVERLYLVAAMGAVVYAAFFAALIAMPIYGGGAYDKNGYQPFNAPVPIFAKKWDANITAFSIQLLILVAGLLTVSGAFAG*
Ga0157294_100443291	3300012892	Soil	PGPLAVERLYLVAAMGAVVYAAFFAALIAMPIYGGAAYDKNGYQPFKAPIPIFAKKWDANITAFSVQLVILVAGILTVSGAIAG*
Ga0157284_100036333	3300012893	Soil	AVERLYLVAAMGAVVYAAFFAALIAMPIYGGGAYDKNGYQPFNAPVPIFAKKWDANITAFSIQLLILVAGLLTVSGAFAG*
Ga0157289_102705941	3300012903	Soil	MGAVVYAAFFAALIAMPIYGGAAYDKNGYQPFKAPIPIFAKKWDANITAFSVQLVILVAGILTVSGAIAG*
Ga0157282_100001151	3300012904	Soil	AAFFASLIAMPIYGGAAYDKNGYQPFNAPVPIFAKKWDANITAFSIQLLILVAGLLTVSGAFAG*
Ga0164301_118828011	3300012960	Soil	FALTWWPGPLAVERLYLVALMSAIVYAAFFGALIAMPLYGGAAYDKNGYEPFNAPIPIIAEKWDANVTIFSIQLVFLAGGLLAVTGVFTR*
Ga0164309_107857091	3300012984	Soil	RLYLVALMSAIVYAAFFGALIAMPLYGGAAYDKNGYQPFDAPIPIIARKWDANITAFSIQLVVLAGGIAAMLG*
Ga0164308_107691782	3300012985	Soil	FFAALVAMPVYGGAAYDKNGYQPFKAPIPIIAKKWDANITAFSIQVLLLVAGIAAVIA*
Ga0164304_105951282	3300012986	Soil	VIVYAAFFAALVAMPVYGGAAYDKNGYQPFKAPIPIIAKKWDANITAFSIQVLLLVAGIAAVSA*
Ga0164307_118691321	3300012987	Soil	LTWWPGPLAVERLYLVALMSAIVYAAFFGALIAMPLYGGAAYDKNGYEPFNAPIPIIAEKWDANVTIFSIQLVFLAGGLLAVTGVFTR*
Ga0164306_103912801	3300012988	Soil	PLAVERLYLVALMSAIVYAAFFGALIAMPLYGGAAYDKNGYEPFNAPIPIIAKKWDANVTIFSIQLVFLAGGLLAVTGVFIR*
Ga0163199_11960132	3300013092	Freshwater	VYAAFFVAVLAMPVYGGAAYDANGYKPFAAPVPLIAKKWDVNITVFCVQLVILAAGIVAVTR*
Ga0157307_10556471	3300013096	Soil	FALIWWPGPLAVERLYFVAAMGAVVYAAFFAALIAMPIYGGGAYDKNGYQPFNAPVPIFAKKWDANITAFSIQLLILVAGLLTVSGAFAG*
Ga0157370_107291542	3300013104	Corn Rhizosphere	YVVAAFAVIIYAAFFIALIAMPVYGGRAYDTNGYKPFKAPIPIIAKKWDANITAFSIHLIILAAGITAVTR*
Ga0163162_123124471	3300013306	Switchgrass Rhizosphere	AFFGALIAMPLYGGAAYDKNGYEPFNAPIPIIAKKWDANVTIFSIQLVFLAGGLLAVTGVFIR*
Ga0157372_116421432	3300013307	Corn Rhizosphere	ERLYFVAAMGAVVYAAFFAALIAMPIYGGAAYDKNGYQPFKAPIPIFAKKWDANITAFSVQLVILVAGILTVSGAIAG*
Ga0163163_108369212	3300014325	Switchgrass Rhizosphere	AFALIWWPGPLAVERLYFVAAMGAVVYAAFFAALIAMPIYGGAAYDKNGYQPFKAPIPIFAKKWDANITAFSVQLVILVAGILTVSGAIAG*
Ga0157379_101943301	3300014968	Switchgrass Rhizosphere	LYFVAAMGAVVYAAFFAALIAMPIYGGAAYDKNGYQPFKAPIPIFAKKWDANITAFSIQLVILVAGILTVSGAVAG*
Ga0132257_1007178702	3300015373	Arabidopsis Rhizosphere	FALIWWPGPLAVERLYLVAAMGAVVYAAFFAALIAMPIYGGGAYDKNGYQPFNAPVPIFAKKWDANITAFSIQLLILVAGLLTVSGAFAG*
Ga0132257_1022250932	3300015373	Arabidopsis Rhizosphere	AAFFAALIAMPIYGGGAYDKNGYQPLNAPIPIFAKKWDANITAFSIQLVILVAGILTVSGVITG*
Ga0132257_1040438362	3300015373	Arabidopsis Rhizosphere	GALIAMPLYGGAAYDKNGYEPFNAPIPIIAEKWDANVTIFSIQLVFLAGGLLAVTGVFTR
Ga0132255_1024053572	3300015374	Arabidopsis Rhizosphere	FGALIAIPIYGGSPYDKNGYQPFNAPIPIIAKKWDVNITVFSIQLVILAAGLVAATR*
Ga0163161_102478592	3300017792	Switchgrass Rhizosphere	VYAAFFGALIAMPLYGGAAYDKNGYEPFNAPIPIIAKKWDANVTIFSIQLVFLAGGLLAVTGVFIR
Ga0187824_103722191	3300017927	Freshwater Sediment	LIWWPGPLAVERLYLVALMGAIVYAAFFAALIAMPVYGGAAYYDNGYQPFNAPVPLIAPKWDANVTIFSVQLIILAAGIAAVSA
Ga0184632_104021162	3300018075	Groundwater Sediment	IVYAAFFAALIAMPIYGGAAYDKNGYQPFKAPIPIIAKRWDANITAFAIQLVILAAGLLAVSGALAG
Ga0184628_101076571	3300018083	Groundwater Sediment	SSYVGFGLLALALIWWPGPLALERLYLVAVMGAIVYAAFFAALIAMPVYGGAAYDSNGYKPFKAPVPLIAKKWDANITIFCVQVVILVAGIAAVSA
Ga0193704_10520942	3300019867	Soil	LLALMGAIVYAAFFAALMAMPLYGGAAYDKNGYQPFEAPLPIIAKRWDANITAFSIQLVILAAGLLAVSGALAG
Ga0193723_11581781	3300019879	Soil	RLYLVALMGAIVYAAFFAALMAMPLYGGAAYDKNGYQPFEAPLPIIAKRWDANITAFSIQLVILAAGLLAVSGALAG
Ga0193719_101795571	3300021344	Soil	AIVYAAFFAALMAMPLYGGAAYDKNGYQPFEAPLPIIAKRWDANITAFSIQLVILAAGLLAVSGALAG
Ga0247748_10023883	3300023168	Soil	FALIWWPGPLAVERLYFVAAMGAVVYAAFFAALIAMPIYGGAAYDKNGYQPFKAPIPIFAKKWDANITAFSIQLVILVAGILTVSGAVAG
Ga0247784_11806962	3300023270	Plant Litter	PGPLAVERLYLVAAMGAVVYAAFFAALIAMPIYGGGAYDKNGYQPFNAPVPIFAKKWDANITAFSIQLLILVAGLLTVSGAFAG
Ga0209584_103695671	3300025878	Arctic Peat Soil	VWQINSYVGLGLLALALIWWPGQLALERLYLVAIMATIVYLAFFVAVLAMPVYGGRAYDTNGYKPFGAPVPVIAKKWDVNITIFSIQVALLAAGVLALAT
Ga0207642_101372142	3300025899	Miscanthus Rhizosphere	VLAFALIWWPGPLAVERLYFVAAMGAVVYAAFFAALIAMPIYGGAAYDKNGYQPFKAPIPIFAKKWDANITAFSIQLVILVAGILTVSGAVAG
Ga0207647_108163552	3300025904	Corn Rhizosphere	VERLYLVALMSAIVYAAFFGALIAMPLYGGAAYDKNGYEPFNAPIPIIAKKWDANVTIFSIQLVFLAGGLLAVTGVFIR
Ga0207707_110307661	3300025912	Corn Rhizosphere	IAMPIYGGAAYDKNGYQPFNAPVPIFAKKWDANITAFSIQLLILVAGLLTVSGAIAG
Ga0207660_101512101	3300025917	Corn Rhizosphere	ALIAMPIYGGGAYDKNGYQPFNAPIPIFAKKWDANITAFSIQLLILVAGLLTVSGAIVG
Ga0207681_114316452	3300025923	Switchgrass Rhizosphere	YFVAAMGAVVYAAFFAALIAMPIYGGAAYDKNGYQPFNAPIPIFAKKWDANITAFSIQLVILVAGILTVSGATAG
Ga0207659_101801442	3300025926	Miscanthus Rhizosphere	FAALIAMPIYGGAAYDKNGYQPFKAPIPIFAKKWDANITAFSVQLVILVAGILTVSGAIA
Ga0207687_105108262	3300025927	Miscanthus Rhizosphere	LYFVAAMGAVVYAAFFAALIAMPIYGGAAYDKNGYQPFKAPIPIFAKKWDANITAFSIQLVILVAGILTVSGAVAG
Ga0207690_115391672	3300025932	Corn Rhizosphere	VYAAFFVALIAMPIYGGAAYDKNGYQPFNAPIPIFAKKWDGNITVFSIQLVILIAGILTVSGAIAG
Ga0207670_101233233	3300025936	Switchgrass Rhizosphere	AMGAVVYAAFFAALIAMPIYGGGAYDKNGYQPFNAPIPIFAKKWDANITAFSIQLVILVAGILTVSGAIAG
Ga0207670_116799121	3300025936	Switchgrass Rhizosphere	VAAMGAVVYAAFFAALIAMPIYGGAAYDKNGYQPFKAPIPIFAKKWDANITAFSIQLVILVAGILTVSGAVAG
Ga0207661_108562871	3300025944	Corn Rhizosphere	PLVVERLYFVAAMGAVVYAAFFAALIAMPIYGGGAYDKNGYQPFNAPIPIFAKKWDANITAFSIQLVILVAGILTVSGAIAG
Ga0207679_105598071	3300025945	Corn Rhizosphere	FFVALIAMPIYGGAAYDKNGYQPFNAPIPIFAKKWDGNITVFSIQLVILIAGILTVSGAIAG
Ga0207441_1070571	3300026793	Soil	VERLYFVAAMGAVVYAAFFAALIAMPIYGGAAYDKNGYQPFNAPVPIFAKKWDANITAFSIQLLILVAGLLTVSGAFAG
Ga0207546_1039001	3300026806	Soil	LAVERLYFVAAMGAVVYAAFFAALIAMPIYGGAAYDKNGYQPFNAPVPIFAKKWDANITAFSIQLLILVAGLLTVSGAFAG
Ga0207490_10015612	3300026841	Soil	GPLAVERLYLVAAMGAVVYAAFFAALIAMPIYGGGAYDKNGYQPFNAPVPIFAKKWDANITAFSIQLLILVAGLLTVSGAFAG
Ga0207516_10128112	3300026905	Soil	LAVERLYLVAAMGAVVYAAFFAALIAMPIYGGGAYDKNGYQPFNAPVPIFAKKWDANITAFSIQLLILVAGLLTVSGAFAG
Ga0209731_10417221	3300027326	Forest Soil	VALMSAIVYATFFGALIAMPIYGGAAYDKNGYQPFNAPIPIFAKKWDTNVTIFSIQLVVLAAGLVAMTR
Ga0207561_1002062	3300027430	Soil	AAMGAVVYAAFFAALIAMPIYGGGAYDKNGYQPFNAPVPIFAKKWDANITAFSIQLLILVAGLLTVSGAFAG
Ga0209421_10084271	3300027432	Forest Soil	ALIAMPIYGGAAYDKNGYQPFKAPVPLFAKKWDANITAFSIQLVILAAGILTVTGAFTG
Ga0209810_11480212	3300027773	Surface Soil	LTWWPGPLAAERLWLVAAMAFIVYAAFFVAAFTMPVYGGAAYDSNGYKPFTPPVPIIARKWDVNITAFAVQVVLLAGGLAALVAAG
Ga0209074_105552702	3300027787	Agricultural Soil	GAIVYSAFFIALVAMPIYGGRAYDKNGYQPFKAPIPIIAKKWDGNITAFSVQLLFLAAGLLTVTGAFAG
Ga0209811_100280771	3300027821	Surface Soil	GLGVLAFALIWWPGPLAVERLYFVAAMGAVVYAAFFAALIAMPIYGGGAYDKNGYQPFNAPIPIFAKKWDANITAFSIQLVILVAGILTVSGAVAG
Ga0209580_103390871	3300027842	Surface Soil	LLTMPIYGGAAYDANGYKPFKAPIPIIAKKWDANITIFCVQLLILAAGIVSIAGVSS
Ga0209974_100206411	3300027876	Arabidopsis Thaliana Rhizosphere	AAFFAALIAMPIYGGGAYDKNGYQPFNAPIPIFAKKWDANITAFSIQLLILVAGLLTVSGAIVG
Ga0209382_123078651	3300027909	Populus Rhizosphere	AALIAMPICGGAAYDRNGYRPFKAPLPIFAKRWDANITAFSIQLVILAAGLLAVSGAFAG
Ga0268264_107455781	3300028381	Switchgrass Rhizosphere	PGPLAVERLYLVALMSAIVYAAFFGALIAMPLYGGAAYDKNGYEPFNAPIPIIAKKWDANVTIFSIQLVFLAGGLLAVTGVFIR
Ga0307287_101431663	3300028796	Soil	MGAIVYAAFFAALMAMPLYGGAAYDKNGYQPFEAPLPIIAKRWDANITAFSIQLVILAAGLLAVSGALAG
Ga0311328_105377711	3300029939	Bog	RLALVALMSTIVYAAFFMALLTMPAYGGATYDKNGYKPFPAPLPLIAKKWDPNITAFSIQLLLLAAGTLALAG
Ga0311343_106938271	3300029953	Bog	LIWWPGPLASERLALVALMSTIVYAAFFMALLTMPAYGGATYDKNGYKPFPAPLPLIAKKWDPNITAFSIQLLLLAAGTLALAG
Ga0170824_1056874931	3300031231	Forest Soil	VFFVALMAMPVYGGAAYDKNGYKPFKAPVPIISKTWDVNITVFSVQLLLLSGGIVAVTR
Ga0310888_107534382	3300031538	Soil	ERLYFVAAMGAVVYAAFFAALIAMPIYGGAAYDKNGYQPFKAPIPIFAKKWDANITAFSIQLVILVAGILTVSGAVAG
Ga0310888_108639782	3300031538	Soil	MGAVVYAAFFAALIAMPIYGGGAYDKNGYQPFNAPIPIFAKKWDANITAFSIQLLILVAGLLTVSGAIAG
Ga0302321_1016332041	3300031726	Fen	AAFFVAVLAMPIYGGKAYDSNGYKPFPAPVPLIAKKWDVNITIFCVQLVILAAGIVAVCA
Ga0310893_104029061	3300031892	Soil	YVGLGLLAFALIWWPGPLAVERLYFVAAMGAVVYAAFFAALIAMPIYGGGAYDKNGYQPFNAPIPIFAKKWDANITAFSIQLLILVAGLLTVSGAIAG
Ga0310891_102678001	3300031913	Soil	VERLYLVAAMGAVVYAAFFAALIAMPIYGGGAYDKNGYQPFNAPVPIFAKKWDANITAFSIQLLILVAGLLTVSGAFAG
Ga0315540_103721591	3300032061	Salt Marsh Sediment	AVMGAIVYAAFFVALAAMPLYGGAAYDKNGYQPFKAPVPLFADKWDANITAFSIQLVILAAGTLAVVS
Ga0310896_105336072	3300032211	Soil	VYAAFFAALIAMPIYGGGAYDKNGYQPFNAPIPIFAKKWDANITAFSIQLLILVAGLLTVSGAIAG
Ga0315273_103174531	3300032516	Sediment	LLTMPIYGGKVADPNGYKPFPAPVPLIAKKWDVNITIFCVQAVILAAGIVAIGARF
Ga0335081_107800802	3300032892	Soil	LMGGIVYIAFFAALIAMPIYGGAAYDKNGYQPFKAPIPIIAAKWDGNITAFSVQLVMLLAGLLAVSRVFAG
Ga0335084_107202212	3300033004	Soil	ALIAMPIYGGAAYDKNGYQPFKAPIPIIAQKWDANITAFSIQLMILAGGIAAILA
Ga0310811_104861681	3300033475	Soil	VIVYAAFFAALVAMPVYGGAAYDKNGYQPFKAPIPIIAKKWDANITAFSIQVLLLVAGIAAVSA
Ga0314872_017837_18_296	3300033810	Peatland	MAFGLIWWPGPLAVERLYLVALMGGIVYIAFFAALIAMPIYGGAAYDKNGYQPFKAPIPIIAAKWDGNITAFSVQLVMLLAGLLAVSRVFAG
Ga0370501_0004504_3291_3563	3300034195	Untreated Peat Soil	GLLALALIWWPGQLALERLYLVAIMATIVYLAFFVAVLAMPVYGGRAYDTNGYKPFGAPVPVIAKKWDVNITIFSIQVALLAAGVLALAT

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F059295

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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