NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F059278

Metagenome Family F059278

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F059278
Family Type Metagenome
Number of Sequences 134
Average Sequence Length 47 residues
Representative Sequence VTASQIIEEIKRLDPKEQLGVIRFAYQLDAERRLTGKELSGLAER
Number of Associated Samples 119
Number of Associated Scaffolds 134

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 35.07 %
% of genes near scaffold ends (potentially truncated) 88.06 %
% of genes from short scaffolds (< 2000 bps) 94.78 %
Associated GOLD sequencing projects 112
AlphaFold2 3D model prediction Yes
3D model pTM-score0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (90.299 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(23.134 % of family members)
Environment Ontology (ENVO) Unclassified
(34.328 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(44.776 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 46.58%    β-sheet: 0.00%    Coil/Unstructured: 53.42%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.53
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 134 Family Scaffolds
PF03795YCII 14.93
PF16326ABC_tran_CTD 7.46
PF13602ADH_zinc_N_2 3.73
PF13307Helicase_C_2 2.99
PF00180Iso_dh 2.99
PF07883Cupin_2 2.99
PF13772AIG2_2 1.49
PF10009DUF2252 1.49
PF05960DUF885 1.49
PF01914MarC 1.49
PF00296Bac_luciferase 1.49
PF12867DinB_2 0.75
PF05157T2SSE_N 0.75
PF08240ADH_N 0.75
PF12704MacB_PCD 0.75
PF12674Zn_ribbon_2 0.75
PF02517Rce1-like 0.75
PF07589PEP-CTERM 0.75
PF16499Melibiase_2 0.75
PF01850PIN 0.75
PF13360PQQ_2 0.75
PF01008IF-2B 0.75
PF02371Transposase_20 0.75
PF04226Transgly_assoc 0.75
PF00854PTR2 0.75
PF03129HGTP_anticodon 0.75
PF08546ApbA_C 0.75
PF04228Zn_peptidase 0.75
PF06094GGACT 0.75

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 134 Family Scaffolds
COG2350YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHisSecondary metabolites biosynthesis, transport and catabolism [Q] 14.93
COG2095Small neutral amino acid transporter SnatA, MarC familyAmino acid transport and metabolism [E] 1.49
COG4805Uncharacterized conserved protein, DUF885 familyFunction unknown [S] 1.49
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 1.49
COG0442Prolyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 0.75
COG1184Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta familyTranslation, ribosomal structure and biogenesis [J] 0.75
COG1266Membrane protease YdiL, CAAX protease familyPosttranslational modification, protein turnover, chaperones [O] 0.75
COG1893Ketopantoate reductaseCoenzyme transport and metabolism [H] 0.75
COG0124Histidyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 0.75
COG0441Threonyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 0.75
COG2261Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein familyGeneral function prediction only [R] 0.75
COG2321Predicted metalloproteaseGeneral function prediction only [R] 0.75
COG0423Glycyl-tRNA synthetase, class IITranslation, ribosomal structure and biogenesis [J] 0.75
COG3104Dipeptide/tripeptide permeaseAmino acid transport and metabolism [E] 0.75
COG3547TransposaseMobilome: prophages, transposons [X] 0.75
COG4449Predicted protease, Abi (CAAX) familyGeneral function prediction only [R] 0.75
COG01825-methylthioribose/5-deoxyribulose 1-phosphate isomerase (methionine salvage pathway), a paralog of eIF-2B alpha subunitAmino acid transport and metabolism [E] 0.75

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms90.30 %
UnclassifiedrootN/A9.70 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459007|GJE5RH004I5QAQAll Organisms → cellular organisms → Bacteria502Open in IMG/M
2170459010|GIO7OMY01BCQWWAll Organisms → cellular organisms → Bacteria521Open in IMG/M
2170459022|GZEQPF101EQW1PAll Organisms → cellular organisms → Bacteria504Open in IMG/M
2189573004|GZGWRS402HBAG8All Organisms → cellular organisms → Bacteria510Open in IMG/M
2199352025|deepsgr__Contig_188979All Organisms → cellular organisms → Bacteria921Open in IMG/M
3300000890|JGI11643J12802_11948673All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus608Open in IMG/M
3300000890|JGI11643J12802_12166314All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300000955|JGI1027J12803_105529019All Organisms → cellular organisms → Bacteria568Open in IMG/M
3300000955|JGI1027J12803_109616793All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium668Open in IMG/M
3300001979|JGI24740J21852_10133922All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus618Open in IMG/M
3300004157|Ga0062590_103051213All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300005174|Ga0066680_10841770Not Available549Open in IMG/M
3300005295|Ga0065707_10674269All Organisms → cellular organisms → Bacteria652Open in IMG/M
3300005295|Ga0065707_10839105All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium586Open in IMG/M
3300005347|Ga0070668_101601336Not Available597Open in IMG/M
3300005353|Ga0070669_101374429All Organisms → cellular organisms → Bacteria612Open in IMG/M
3300005367|Ga0070667_101961307All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium551Open in IMG/M
3300005446|Ga0066686_10827522All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium614Open in IMG/M
3300005451|Ga0066681_10425319All Organisms → cellular organisms → Bacteria816Open in IMG/M
3300005454|Ga0066687_10570442All Organisms → cellular organisms → Bacteria672Open in IMG/M
3300005467|Ga0070706_100878364All Organisms → cellular organisms → Bacteria829Open in IMG/M
3300005468|Ga0070707_100490860All Organisms → cellular organisms → Bacteria1190Open in IMG/M
3300005471|Ga0070698_100357629All Organisms → cellular organisms → Bacteria1392Open in IMG/M
3300005518|Ga0070699_101559609All Organisms → cellular organisms → Bacteria605Open in IMG/M
3300005536|Ga0070697_101914470All Organisms → cellular organisms → Bacteria531Open in IMG/M
3300005539|Ga0068853_102029542All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium558Open in IMG/M
3300005543|Ga0070672_101340199All Organisms → cellular organisms → Bacteria639Open in IMG/M
3300005553|Ga0066695_10530872All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium719Open in IMG/M
3300005556|Ga0066707_10285206Not Available1080Open in IMG/M
3300005556|Ga0066707_10468297All Organisms → cellular organisms → Bacteria818Open in IMG/M
3300005559|Ga0066700_10986985All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium555Open in IMG/M
3300005569|Ga0066705_10711698All Organisms → cellular organisms → Bacteria604Open in IMG/M
3300005569|Ga0066705_10893206All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia527Open in IMG/M
3300005569|Ga0066705_10944145All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium512Open in IMG/M
3300005575|Ga0066702_10308734All Organisms → cellular organisms → Bacteria964Open in IMG/M
3300005576|Ga0066708_10045384All Organisms → cellular organisms → Bacteria2436Open in IMG/M
3300005587|Ga0066654_10497419All Organisms → cellular organisms → Bacteria668Open in IMG/M
3300005598|Ga0066706_10704900All Organisms → cellular organisms → Bacteria802Open in IMG/M
3300005713|Ga0066905_100042403All Organisms → cellular organisms → Bacteria2710Open in IMG/M
3300005764|Ga0066903_104161426All Organisms → cellular organisms → Bacteria774Open in IMG/M
3300006034|Ga0066656_10095134All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1800Open in IMG/M
3300006057|Ga0075026_100847740All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium558Open in IMG/M
3300006173|Ga0070716_100365069All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1027Open in IMG/M
3300006173|Ga0070716_100503648All Organisms → cellular organisms → Bacteria894Open in IMG/M
3300006175|Ga0070712_100168493All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1697Open in IMG/M
3300006791|Ga0066653_10453409Not Available653Open in IMG/M
3300006796|Ga0066665_11606556All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300006800|Ga0066660_11088657All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium634Open in IMG/M
3300006854|Ga0075425_100818848All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1067Open in IMG/M
3300009012|Ga0066710_101618880All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia991Open in IMG/M
3300009089|Ga0099828_10521525All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1071Open in IMG/M
3300009090|Ga0099827_11818253All Organisms → cellular organisms → Bacteria531Open in IMG/M
3300009156|Ga0111538_11516569All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium845Open in IMG/M
3300009162|Ga0075423_10491573All Organisms → cellular organisms → Bacteria1290Open in IMG/M
3300009162|Ga0075423_11154438All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia826Open in IMG/M
3300009553|Ga0105249_12129357All Organisms → cellular organisms → Bacteria634Open in IMG/M
3300010304|Ga0134088_10582338All Organisms → cellular organisms → Bacteria556Open in IMG/M
3300010329|Ga0134111_10476066All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300010358|Ga0126370_10551465All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium985Open in IMG/M
3300010376|Ga0126381_105072194All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300012206|Ga0137380_11594353All Organisms → cellular organisms → Bacteria537Open in IMG/M
3300012210|Ga0137378_10785935All Organisms → cellular organisms → Bacteria864Open in IMG/M
3300012285|Ga0137370_10512483All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium735Open in IMG/M
3300012350|Ga0137372_10817487All Organisms → cellular organisms → Bacteria667Open in IMG/M
3300012350|Ga0137372_11165366All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Schlesneria → Schlesneria paludicola523Open in IMG/M
3300012354|Ga0137366_10682009Not Available733Open in IMG/M
3300012354|Ga0137366_10897361All Organisms → cellular organisms → Bacteria624Open in IMG/M
3300012354|Ga0137366_10939880All Organisms → cellular organisms → Bacteria606Open in IMG/M
3300012354|Ga0137366_11182198Not Available521Open in IMG/M
3300012356|Ga0137371_10750526Not Available745Open in IMG/M
3300012357|Ga0137384_10883622All Organisms → cellular organisms → Bacteria721Open in IMG/M
3300012358|Ga0137368_10409830All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter888Open in IMG/M
3300012360|Ga0137375_10908980Not Available699Open in IMG/M
3300012361|Ga0137360_11682885All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium540Open in IMG/M
3300012532|Ga0137373_11153828All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia550Open in IMG/M
3300012918|Ga0137396_11170647All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium544Open in IMG/M
3300012923|Ga0137359_11727259All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300012925|Ga0137419_10907343All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium726Open in IMG/M
3300012930|Ga0137407_11233177All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter710Open in IMG/M
3300013102|Ga0157371_10860284All Organisms → cellular organisms → Bacteria686Open in IMG/M
3300013104|Ga0157370_10864542All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia821Open in IMG/M
3300013297|Ga0157378_10527852Not Available1183Open in IMG/M
3300014157|Ga0134078_10221103All Organisms → cellular organisms → Bacteria782Open in IMG/M
3300014745|Ga0157377_11323485All Organisms → cellular organisms → Bacteria564Open in IMG/M
3300015168|Ga0167631_1003744All Organisms → cellular organisms → Bacteria2169Open in IMG/M
3300015241|Ga0137418_10078492All Organisms → cellular organisms → Bacteria2997Open in IMG/M
3300015359|Ga0134085_10591281All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia515Open in IMG/M
3300015360|Ga0163144_10347367All Organisms → cellular organisms → Bacteria1830Open in IMG/M
3300016294|Ga0182041_10215216All Organisms → cellular organisms → Bacteria1540Open in IMG/M
3300016341|Ga0182035_10179840All Organisms → cellular organisms → Bacteria1654Open in IMG/M
3300016341|Ga0182035_10700108All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium882Open in IMG/M
3300016341|Ga0182035_12058293All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia519Open in IMG/M
3300016387|Ga0182040_11412020All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium590Open in IMG/M
3300018027|Ga0184605_10078169Not Available1439Open in IMG/M
3300018028|Ga0184608_10207819All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus858Open in IMG/M
3300018066|Ga0184617_1067550All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia945Open in IMG/M
3300018433|Ga0066667_11763779All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium558Open in IMG/M
3300018482|Ga0066669_11117612All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium711Open in IMG/M
3300019886|Ga0193727_1029988All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus1871Open in IMG/M
3300020006|Ga0193735_1162238All Organisms → cellular organisms → Bacteria568Open in IMG/M
3300021078|Ga0210381_10292860All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium586Open in IMG/M
3300021413|Ga0193750_1015930All Organisms → cellular organisms → Bacteria1846Open in IMG/M
3300021445|Ga0182009_10723741All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium540Open in IMG/M
3300022756|Ga0222622_10347006All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1033Open in IMG/M
3300024279|Ga0247692_1073501Not Available536Open in IMG/M
3300025290|Ga0207673_1055295All Organisms → cellular organisms → Bacteria564Open in IMG/M
3300025906|Ga0207699_10114886All Organisms → cellular organisms → Bacteria1731Open in IMG/M
3300025929|Ga0207664_11020140All Organisms → cellular organisms → Bacteria741Open in IMG/M
3300025930|Ga0207701_10193795All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1788Open in IMG/M
3300025930|Ga0207701_10701990All Organisms → cellular organisms → Bacteria857Open in IMG/M
3300025939|Ga0207665_10963179All Organisms → cellular organisms → Bacteria678Open in IMG/M
3300025942|Ga0207689_11188293Not Available642Open in IMG/M
3300025986|Ga0207658_11726952All Organisms → cellular organisms → Bacteria572Open in IMG/M
3300026317|Ga0209154_1325763All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium504Open in IMG/M
3300026318|Ga0209471_1263795All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium582Open in IMG/M
3300026323|Ga0209472_1070798All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia1440Open in IMG/M
3300026332|Ga0209803_1053242All Organisms → cellular organisms → Bacteria1780Open in IMG/M
3300026335|Ga0209804_1171127Not Available950Open in IMG/M
3300026528|Ga0209378_1025683All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3185Open in IMG/M
3300026536|Ga0209058_1264453All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia598Open in IMG/M
3300026550|Ga0209474_10213505All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1220Open in IMG/M
3300028718|Ga0307307_10308145All Organisms → cellular organisms → Bacteria510Open in IMG/M
3300028814|Ga0307302_10499078All Organisms → cellular organisms → Bacteria604Open in IMG/M
3300029999|Ga0311339_11818737All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia528Open in IMG/M
3300031231|Ga0170824_104911822All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium523Open in IMG/M
3300031879|Ga0306919_11224193All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium570Open in IMG/M
3300031890|Ga0306925_10217209All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix2062Open in IMG/M
3300031945|Ga0310913_10637973All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia755Open in IMG/M
3300031947|Ga0310909_10168610All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix1808Open in IMG/M
3300031996|Ga0308176_12750512All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium523Open in IMG/M
3300032001|Ga0306922_12290514All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300032261|Ga0306920_103485643All Organisms → cellular organisms → Bacteria582Open in IMG/M
3300032421|Ga0310812_10022764All Organisms → cellular organisms → Bacteria2230Open in IMG/M
3300032828|Ga0335080_11935790All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium572Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil23.13%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil16.42%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere7.46%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil6.72%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.48%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.99%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.99%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.99%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.24%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.24%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.24%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.49%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.49%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil1.49%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere1.49%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil1.49%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere1.49%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.49%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.49%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.49%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.49%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.75%
Freshwater Microbial MatEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat0.75%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.75%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.75%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.75%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.75%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.75%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.75%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.75%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.75%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa0.75%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.75%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.75%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.75%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.75%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459007Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 10-21cmEnvironmentalOpen in IMG/M
2170459010Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)EnvironmentalOpen in IMG/M
2170459022Grass soil microbial communities from Rothamsted Park, UK - FA2 (control condition)EnvironmentalOpen in IMG/M
2189573004Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)EnvironmentalOpen in IMG/M
2199352025Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOILEnvironmentalOpen in IMG/M
3300000890Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300001979Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6Host-AssociatedOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006057Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012358Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300013102Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaGHost-AssociatedOpen in IMG/M
3300013104Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300015168Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G4A, Ice margin, adjacent to proglacial lake)EnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300015360Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.BULKMAT1EnvironmentalOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018066Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019886Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2EnvironmentalOpen in IMG/M
3300020006Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2EnvironmentalOpen in IMG/M
3300021078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redoEnvironmentalOpen in IMG/M
3300021413Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c1EnvironmentalOpen in IMG/M
3300021445Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaGEnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300024279Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK33EnvironmentalOpen in IMG/M
3300025290Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5Host-AssociatedOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026317Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)EnvironmentalOpen in IMG/M
3300026318Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)EnvironmentalOpen in IMG/M
3300026323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)EnvironmentalOpen in IMG/M
3300026332Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)EnvironmentalOpen in IMG/M
3300026335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)EnvironmentalOpen in IMG/M
3300026528Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)EnvironmentalOpen in IMG/M
3300026536Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300028718Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194EnvironmentalOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300029999I_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032421Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
L02_070492602170459007Grass SoilMTANEIIEEIKRLGPKEQLGVIRFAYRLDAERRLTGKELAELAERMVNTTD
F62_018025202170459010Grass SoilMTANEIIEQIKRLNPKEQLRVIRFAYQLDAKRRLTGEELSGLAERM
FA2_003688802170459022Grass SoilVTATQIIEEIKRLDPQQQLGVIRFAYQLDAERQLTGDELAALAERMV
FG2_079168802189573004Grass SoilVTASQIIEEIKRLGPEEQLGVIRFAYQLDAERQLTGDELSSLAERMVN
deepsgr_032544002199352025SoilMTASEIIVEIKRLDRKEQLGVIRFAYQLDAERRLTGKELSQLAERMVNA
JGI11643J12802_1194867313300000890SoilMTASKIIEEIKRLDPKEQLDVIRFAYQLDAERRLTGKELS
JGI11643J12802_1216631423300000890SoilMTASEIIVEIKRLDRKEQLGVIRFAYQLDAERRLTGKELAQLAERMVNATD
JGI1027J12803_10552901913300000955SoilMTASEIIEEIKRLRRKEQLGVIRFAYQLDTERRLTGKELAELAERMVN
JGI1027J12803_10961679313300000955SoilVTAAQIIEEIKRLDPKEQLGIIRFAYQLDAEGHLTGS
JGI24740J21852_1013392223300001979Corn RhizosphereVLEFGREMTASKIIEEIKLLDPKEQLDVIRFAYQLDAERRLTGKELSSLAERMV
Ga0062590_10305121323300004157SoilMTANEIIEEITRLDSKEQLVVIRFAYQLDAERRLTGKELSGLAERMVRATDP
Ga0066680_1084177013300005174SoilLPPYALTSVITADQIIEEIKRLDPKDQAGVIRFAYQLDAERKLTGKE
Ga0065707_1067426923300005295Switchgrass RhizosphereMTANEIIEEIKRLGRKEQLGVIRFTYQLDSERRLTGKDLSGLAERMVNATDPAEEAI
Ga0065707_1083910523300005295Switchgrass RhizosphereMSPVLEFGPEMTASKIIEEIKRLDPKEQLDAIRFAYQLDAERRLMGKELS
Ga0070668_10160133623300005347Switchgrass RhizosphereVTAAQIIEEIKRLDPKEQLGIIRFAYQLDAERHLTGGELSSLAERMVNTTDAVEAA
Ga0070669_10137442913300005353Switchgrass RhizosphereMTASEIIVEIKRLDRKEQLGVIRFAYQLDAERRLTGKELAQLAERMVNATDPAEAALIRE
Ga0070667_10196130723300005367Switchgrass RhizosphereMTASEIIVEIKRLDRKEQLGVIRFAYQLDAERRLTGKALAQLAERMVNAVDPAEEA
Ga0066686_1082752213300005446SoilMTASQIIEEIKRLDPKEQLGVIHFAYQLDAERKLSGAELSSLAA
Ga0066681_1042531933300005451SoilMTANEIIKEIKRLNPKEQMGVIRFAYQLDAERRLTGEELSGLAERMVNA
Ga0066687_1057044223300005454SoilVTATEIIEEIKRLDPEQQLIRFAYQLDVERQLTGDELSSLAERMVNSADP
Ga0070706_10087836423300005467Corn, Switchgrass And Miscanthus RhizosphereMTAGEIIEEIKRLDPKEQLGVIRFAYQLDAERKLSGAELSSLAARMTET
Ga0070707_10049086023300005468Corn, Switchgrass And Miscanthus RhizosphereMTAGEIIEEIKRLDPKEQLGVIRFAYQLDAERKLSGAELSSLAARMTETDDA
Ga0070698_10035762933300005471Corn, Switchgrass And Miscanthus RhizosphereMTANEIIEEIKRLDPKEQLGVIRFAYQLDAERRLTGKELSGLAERMV
Ga0070699_10155960923300005518Corn, Switchgrass And Miscanthus RhizosphereMSAAEIIEQIKRLPQEQLGVIRFVYQLDAERRLSGGELSSLAERMTKATDA
Ga0070697_10191447023300005536Corn, Switchgrass And Miscanthus RhizosphereMTASEIIEEIKRLDPQEQLGVIRFAYQLDAERKLSGAELSSLAARMTETDDA
Ga0068853_10202954223300005539Corn RhizosphereVLEFGREMTASKIIEEIKLLDPKEQLDVIRFAYQLDAERRLTGKELSSL
Ga0070672_10134019923300005543Miscanthus RhizosphereVTASQIIEEIKRLDPKEQLGVIRFAYQLDAERRLTGKELSGLAER
Ga0066695_1053087223300005553SoilLSVTATQIIEEIKRLDSQQQLGVIRFAYQLDAERQLTGDELSGLAERMV
Ga0066707_1028520633300005556SoilVTAEQIIEEIKRLDPKDQLGVIRFAYQLDAERKLSGKE
Ga0066707_1046829713300005556SoilVTAQQIIEEIKRLGPKEQLGVIRFAYQLDAERQLSGQELSKLA
Ga0066700_1098698513300005559SoilMTADEIIEEIKRLDPKDQAGVIRFAYQLDAERKLTGKE
Ga0066705_1071169823300005569SoilVTAAQIIEEIKRLDPKEQLGIIRFAYQLDAERHLTGSEL
Ga0066705_1089320613300005569SoilMTASQIIEEIKRLDPKEQLGVIRFAYQLDAERHLTGSE
Ga0066705_1094414523300005569SoilVTAAQIIEEIKRLDPKEQLGIIRFAYQLDAERHLTG
Ga0066702_1030873433300005575SoilMTANEIIKQIKRLNPKQQMGVIRFAYQLDAERRLTGEELSGLAERMVKTTD
Ga0066708_1004538413300005576SoilVTAAQIIEEIKCLDPKEQLGVIRFAYQLDAERHLSGNELSALAERMVNTTDA
Ga0066654_1049741933300005587SoilMTANEIIKEIKRLNPKEQMGVIRFAYQLDAERRLTGEE
Ga0066706_1070490013300005598SoilVTASQIIEEIKRLDPKEQLGVIRFAYQLDTEHQLRGKELSSLAERMVQTTD
Ga0066905_10004240343300005713Tropical Forest SoilMTASEIIVEIKRLNRKEQLGVIRFAYQLDAKRRLTGEELSGLAERMVN
Ga0066903_10416142633300005764Tropical Forest SoilMTASEIIEEIKRLHRNEQLGVIRFAYQLDAKRRLTGEELSGLAERMVKATDPAEEA
Ga0066656_1009513443300006034SoilMSIVTASEIIEEIKRLDPMEQLGVIRFAYQLDAERRLTGKELSALA
Ga0075026_10084774023300006057WatershedsMTASKIIEEIKQLDPKEQLDVIRFAYQLDAERRLTGKE
Ga0070716_10036506913300006173Corn, Switchgrass And Miscanthus RhizosphereMTASKIIKEIKRLGLKEQLAVIRFAYQLDAERRLTGKE
Ga0070716_10050364823300006173Corn, Switchgrass And Miscanthus RhizosphereVTASQIIEEIKRLPSEEQLGVIRFAYQLDAERQLTGNELARLAERMVNTVDPAE*
Ga0070712_10016849313300006175Corn, Switchgrass And Miscanthus RhizosphereVTAAQIIEEIKRLDPKEQLGIIRFAYQLDAERHLTGGELSSLAERMVNTTDAV*
Ga0066653_1045340913300006791SoilVTATQIIEEIKRLDPQQQLGVIRFAYQLDAERQLTGDELSGLAERMMRTTN
Ga0066665_1160655623300006796SoilMTASEIIEEIKRLGPKEQLGVIRFAYHLDAERKLSGAELSSLAARMTETDDAVE
Ga0066660_1108865723300006800SoilVTATQIIDEIKRLDPKEQAGVVRFVYQLDAERKLSGPELSTLAERLVNAK
Ga0075425_10081884813300006854Populus RhizosphereMTASKIIEEIKRLDPKEQLDVIRFAYQLDAERRLTGKELSSLAESMVN
Ga0066710_10161888023300009012Grasslands SoilVTAQQIIEEIKRLDPKEQLGVIRFAYQLDAERKLSGQELSQLAARMTETDDVVEAATNRRKRR
Ga0099828_1052152523300009089Vadose Zone SoilLIVTANQIIKEIKRLDPKEQLGVIRFAYQLDAERHLTG
Ga0099827_1181825313300009090Vadose Zone SoilLIVTADQIIKEVKRLDPKKQLGVIRFAYQLDAERHLTGNEL
Ga0111538_1151656923300009156Populus RhizosphereVTASQIIEESKRLDPKEQIGVIRLAYQLDAERQLTGKELSALAERMVNTTDPAE
Ga0075423_1049157333300009162Populus RhizosphereMTADEIIEEIKRLDLKEQLGVIRFASRLAAERRLTGKELSELAEQLVNATN
Ga0075423_1115443813300009162Populus RhizosphereMTASEIIDEIKRLDPQEQLGVIRFAYQLDAERKLSGEELSSLAARMTETDEMLKLRGSAKR*
Ga0105249_1212935733300009553Switchgrass RhizosphereMTASEIIVEIKRLDRKEQLGVIRFAYQLDAERRLTGKELAQLAERMV
Ga0134088_1058233813300010304Grasslands SoilMSIVTASEIIEEIKRLDPMEQLGVIRFAYQLDAERRLTGKELS
Ga0134111_1047606613300010329Grasslands SoilVTATQIIEEIKRLDPEQQLGVIRFAYQLDAERQLTGDELAGLAERM
Ga0126370_1055146543300010358Tropical Forest SoilVTASQIIEEIKRLDPKEQIGVIRFAYQLDAERWLTGKELSALAERMVNTSDPAEKAR
Ga0126381_10507219413300010376Tropical Forest SoilVTATQIIEEIKRLGPEEQLGVIRFAYQLDAERQLTGEELASLAECMVKTTDPA
Ga0137380_1159435333300012206Vadose Zone SoilVTASQIIEEIKQLDPKEQLGVIQFAYQLDAERHLTG
Ga0137378_1078593543300012210Vadose Zone SoilMTADQIIEEIKRLDPKDQLGVIRFAYQLDAERKLTGKELSSLATRMTETDDPAEAAIIGR
Ga0137370_1051248323300012285Vadose Zone SoilVTAAEIIEEITRLDPKEQLDVIRFAYQLDAERRLSGSELSRLAARMTETDDPA
Ga0137372_1081748723300012350Vadose Zone SoilMTASQIIDEIKSLTPEEQAGVVRFVYQLDAERKLSGPEFVHPG*
Ga0137372_1116536623300012350Vadose Zone SoilVTASQIIEEIKRLGPEEQVGVIRFAYQLDAELQLTGNELASLAERMVNATDPAEQAR
Ga0137366_1068200913300012354Vadose Zone SoilMTADQIIEEIKRLDPKDPAGVIRFAYQLDAERVIEL*
Ga0137366_1089736113300012354Vadose Zone SoilVTAAQIIEEIKRLDPKEQLGIIRFAYQLDAERHLTGSELSS
Ga0137366_1093988013300012354Vadose Zone SoilVTATQIIEEIKRLDPEQQLGVIRFAYQLDAERQLTGDELASLAE
Ga0137366_1118219813300012354Vadose Zone SoilVTAEQIIEEIKRLDPKDQLGVIRFAYQLDAERKLSGKEL
Ga0137371_1075052623300012356Vadose Zone SoilVTAEQIIEEIKRLDPKDQLCVIRFAYQLDAERKLSGKELSNLAARMT
Ga0137384_1088362213300012357Vadose Zone SoilVTAAQIIEEIKRLDPKEQLGIIRFAYQLDAERHLTGSELSSLAERM
Ga0137368_1040983013300012358Vadose Zone SoilMTANEIIEEIKRLGPKEQLGVIRFAYQLDSERRLTGKELSGLAERMVKATD
Ga0137375_1090898023300012360Vadose Zone SoilVTAEQIIEEIKRLDPKDQLGVIRFAYQLDAERQLSGKELS
Ga0137360_1168288523300012361Vadose Zone SoilNVTAAEIIEEIKRLDPKEQLGVIRFAYQLDAERKLSEANCRV*
Ga0137373_1115382823300012532Vadose Zone SoilVTAQQIIEEIKRLDPKEQLGVIRFAYQLDAERKLSGQEL
Ga0137396_1117064713300012918Vadose Zone SoilVTATQIIEEIKRLDPQQQLGVIRFAYQLDAERQLTGDELSG
Ga0137359_1172725913300012923Vadose Zone SoilVTAAQIIEEIKRLDPKEQLGIIRFAYQVDAVRHLTSGEFELGRA
Ga0137419_1090734323300012925Vadose Zone SoilVTAAEIVEEIKRLDPKEQLGVIRFAYQLDAERKL*
Ga0137407_1123317713300012930Vadose Zone SoilMTANEIIEEIKRLDLKEQLGVIRFAYQLDAERRLTGKELSGLAERM
Ga0157371_1086028413300013102Corn RhizosphereVTAAQIIGEIKRLDPKEQLGIIRFAYQLDAERHLTGGELS
Ga0157370_1086454223300013104Corn RhizosphereMTASKIIEEIKLLDPKEQLDVIRFAYQLDAERRLTGKELSSLAERMVNA
Ga0157378_1052785223300013297Miscanthus RhizosphereVTAAQIIEEIKRLDPKEELGIIRFAYQLDAERHLTGGELSSLAERMVNTTDAV*
Ga0134078_1022110313300014157Grasslands SoilVTATQIIEEIRRLDPEQQLGVIRFAYQLDAERQLTGDELAGLAERMVKTTD
Ga0157377_1132348523300014745Miscanthus RhizosphereMTASEIIVEIKRLDRKEQLGVIRFAYQLDAERRLTGKELAQLAERMVN
Ga0167631_100374433300015168Glacier Forefield SoilMTASKIIEEIKRLDPKEQLDIIRFAYHLDAERRLTGTELSSLAERLVSATDPAV*
Ga0137418_1007849223300015241Vadose Zone SoilVTAAEIIEEIKRLDPKEQLGVIRFAYQLDAERKL*
Ga0134085_1059128123300015359Grasslands SoilVTAQQIIKEIKRLDPKEQLDVIRFADQLDAERQLSGEELSKLAARMTKTD
Ga0163144_1034736713300015360Freshwater Microbial MatMTAQQIISEIEVLPPEEQAKVVRFAYQLDAERQLTGA
Ga0182041_1021521613300016294SoilVTASQIIEEIKRLRPEEQVGVIRFAYQLDAERQLTGNELASLAE
Ga0182035_1017984013300016341SoilVTASQIIEEIKRLRPEEQVGVIRFAYQLDAERQLTGNELASLAERMVNTIDPA
Ga0182035_1070010813300016341SoilVTATQIIEEIKRLDPQQQLGVIRFAYQLDAERQLTGNELASLAERMVNTTDPAEQARI
Ga0182035_1205829313300016341SoilVTANQIIEEIKRLGPEEQIGVIRFAYQLDAERQLTGDELSSLAERMVRTTDPAEQARI
Ga0182040_1141202013300016387SoilVSESQIIEEIKRLDPKEELGVIRFAYQLDAERRLTGKELSALAERMVNTSDPAGKARVR
Ga0184605_1007816933300018027Groundwater SedimentMTASQIIEEIKRLDAKEQLGVIRFAYQLDAERKLSG
Ga0184608_1020781933300018028Groundwater SedimentMTASEIIVEIKRLDRKEQLGVIRFAYQLDAERRLTGKELA
Ga0184617_106755013300018066Groundwater SedimentMTASKIIEEIKRLDPKEQLDVIRFAYQLDAERRLTGKELSSLAERMVKATDPAEEARIR
Ga0066667_1176377923300018433Grasslands SoilVTAAQIIEEIKRLDPKEQLGVIRFAYQLDAERTLSGKELS
Ga0066669_1111761223300018482Grasslands SoilMTAREIIEEIKRLDPKEQMGVIRFAYQLDAERRLTGKELSSLAER
Ga0193727_102998813300019886SoilVTAAQIIEEIKRLDPKEQLGIIRFAYQLDAERHLTGSELSSLAERMVNT
Ga0193735_116223823300020006SoilMTAHEIIEEIKRLHPKEQLGVIRFAYQLDADRRLTGKELSGL
Ga0210381_1029286013300021078Groundwater SedimentMTASKIIEEIKQLDPKEQLDVIRFAYQLDAERRLTGKELSSLAERMVKATDPAEEA
Ga0193750_101593013300021413SoilVTAAQIIEEIKRLDPKEQLGIIRFAYQLDAERHLTGGELSSLAERMVNTTDA
Ga0182009_1072374123300021445SoilMTASKIIEEIKRLDPKEQLDVIRFAYQLDAERRLTGKELSSLAERMVNAT
Ga0222622_1034700623300022756Groundwater SedimentMTASKIIEEIKQLDPKEQLDVIRFAYQLDAERRLTGKELSSLAERMVNATDPA
Ga0247692_107350123300024279SoilVTADEIIEQIKRLDPKDQAGVIRFAYQLDAERKLTGNELSSLAARMAKTNDPAEAA
Ga0207673_105529523300025290Corn, Switchgrass And Miscanthus RhizosphereVTAAQIIEEIKRLDPKEQLGIIRFAYQLDAERHLTGGELSSLAERMVNTT
Ga0207699_1011488613300025906Corn, Switchgrass And Miscanthus RhizosphereVTANQIIEEIKRLPSEEQLGVIRFAYQLDAEVQLTGN
Ga0207664_1102014013300025929Agricultural SoilVTANQIIEEIKRLPSEEQLGVIRFAYQLDAEVQLTG
Ga0207701_1019379523300025930Corn, Switchgrass And Miscanthus RhizosphereVTAAQIIEEIKRLDPKEQLGIIRFAYQLDAERHLTGGELSSLAERMVNTTDAV
Ga0207701_1070199013300025930Corn, Switchgrass And Miscanthus RhizosphereMTASEIIVEIKRLDRKEQLGVIRFAYQLDAERRLTGKALAQLAERMVNAVDPAEEALIRQ
Ga0207665_1096317923300025939Corn, Switchgrass And Miscanthus RhizosphereVTASQIIEEIKRLPSEEQLGVIRFAYQLDAERQLTGNELARLAERMVNTVDPAE
Ga0207689_1118829313300025942Miscanthus RhizosphereVTVISIIEEIRKLSAEDQAKVIRFAYELDAERKLTGG
Ga0207658_1172695213300025986Switchgrass RhizosphereMTASEIIVEIKRLDRKEQLGVIRFAYQLDAERRLTGKALAELAERMVNAVDPAEEAL
Ga0209154_132576323300026317SoilMTANEIIKQIKRLNPKQQMGVIRFAYQLDAERRLTGEELSGLAERMVKTTDPAE
Ga0209471_126379513300026318SoilVTAAEIIEEIKRLDPKEQLGVIRFAYQLDAERKLSGSELSRLAARMTENRRSR
Ga0209472_107079833300026323SoilMTADQIIEEIKRLDPKDQAGVIRFAYQLDAERKLTGKELSSLAARMTETDDP
Ga0209803_105324223300026332SoilVTAVEIIEEIKRLDPKEQLGVIRFAYQLDAERHLTGNELSKLAERMVKTTDP
Ga0209804_117112713300026335SoilMTADQIIEEIRRLDPKEQLGVIRFAYQLDAERKLSGNELSSLAGRMAETNDPVEAAMIRA
Ga0209378_102568313300026528SoilVTAEQIIEEIKRLDPKDQLGVIRFAYQLDAERKLSGKELS
Ga0209058_126445323300026536SoilMTASQIIEEIKRLDPKEQLGVIRFAYQLDAERHLTGSELSSLAERMVNTTDAVEAARV
Ga0209474_1021350533300026550SoilVTAAQIIEEIKRLDPKEQLGVIRFAYQLDAERHLSGNELSALAERMVN
Ga0307307_1030814523300028718SoilMTASEIIVEIKRLDRKAQLGVIRFAYQLDAERRLTGKELAQLAE
Ga0307302_1049907813300028814SoilVTATQIIEEIERLDPQQQLGVIRFAYQLDAERQLTGDELSGLAERMVATT
Ga0311339_1181873713300029999PalsaMTASEIITQIESLPPADQLRVIRFAYRLDAERQLTGDEIAA
Ga0170824_10491182213300031231Forest SoilMTANEIIEQIKRLNPKEQLGVIRFAYQLDAKRRLTGEE
Ga0306919_1122419313300031879SoilVTASQIIEEIKRLDPKEQIGVIRFAYQLDAERRLTGKELSA
Ga0306925_1021720933300031890SoilVTASQIIEEIKRLDPKEELGVIRFAYQLDAERRLTGKELSALAERMVNTSDPAGKARVR
Ga0310913_1063797313300031945SoilLKRVAVLCDVTASQIIEEIKRLDPKEQIGVIRFAYQLDAERRLTGKELSALAERMVNT
Ga0310909_1016861013300031947SoilRSVTASQIIEEIKRLDPKEELGVIRFAYQLDAERRLTGKELSALAERMVNTSDPAGKARV
Ga0308176_1275051213300031996SoilMTASKIIKEIKRLGLKEQLAVIRFAYQLDAERRLTGKELSSLAER
Ga0306922_1229051413300032001SoilVTATQIIEEIKRLDPQQQLGVIRFAYQLDAERQLTGNEL
Ga0306920_10348564313300032261SoilLRRVAVLSLVTASQIIEEIKRLDPKEQIGVIRFAYQLDAERQLTGKELSALAERMVNTS
Ga0310812_1002276443300032421SoilVTAQQIIEEIKRLDPKEQLCVIRFAYQLDAERQLSGQELSNLAA
Ga0335080_1193579023300032828SoilMTASKIIEEIKRLDPKEQLDVTRFAYQLDAERRLT

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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