Metagenome / Metatranscriptome Family F059258

Overview

Basic Information

• Family ID: F059258
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 134
• Average Sequence Length: 43 residues
• Representative Sequence: MTEDPEASVLTARRAAQHVRLSSADDAYEHLCILTLLPSLAPLH
• Number of Associated Samples: 127
• Number of Associated Scaffolds: 134

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 15.67 %
• % of genes near scaffold ends (potentially truncated): 98.51 %
• % of genes from short scaffolds (< 2000 bps): 89.55 %
• Associated GOLD sequencing projects: 118
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (70.149 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (23.134 % of family members)
• Environment Ontology (ENVO): Unclassified (29.104 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (50.746 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 50.00%
  β-sheet: 0.00%
  Coil/Unstructured: 50.00%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF13655	RVT_N	55.22
PF00078	RVT_1	1.49
PF01548	DEDD_Tnp_IS110	0.75
PF13744	HTH_37	0.75
PF00903	Glyoxalase	0.75
PF12704	MacB_PCD	0.75

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.75

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	70.15 %
Unclassified	root	N/A	29.85 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	70.15 %
Unclassified	root	N/A	29.85 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	70.15 %
Unclassified	root	N/A	29.85 %

Level 4

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	61.94 %
Unclassified	root	N/A	29.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.49 %

Level 5

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	58.21 %
Unclassified	root	N/A	29.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.49 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.75 %

Level 6

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	58.21 %
Unclassified	root	N/A	29.85 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	1.49 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.75 %

Level 7

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	58.21 %
Unclassified	root	N/A	29.85 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	1.49 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.75 %

Level 8

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	58.21 %
Unclassified	root	N/A	29.85 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	1.49 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.75 %

Level 9

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	58.21 %
Unclassified	root	N/A	29.85 %
Pseudomonas aeruginosa group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas aeruginosa group	1.49 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.75 %

Level 10

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	58.21 %
Unclassified	root	N/A	29.85 %
Pseudomonas aeruginosa	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas aeruginosa group → Pseudomonas aeruginosa	1.49 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.75 %

Associated Scaffolds

Scaffold	Taxonomy	Length
2209111019|2221146932	Not Available	1263
3300001412|JGI20173J14856_1030915	Not Available	733
3300001545|JGI12630J15595_10051184	Not Available	826
3300001545|JGI12630J15595_10092784	All Organisms → cellular organisms → Bacteria → Acidobacteria	593
3300001593|JGI12635J15846_10624384	Not Available	625
3300001661|JGI12053J15887_10642193	Not Available	504
3300002909|JGI25388J43891_1008204	Not Available	2007
3300002910|JGI25615J43890_1003982	Not Available	2212
3300004120|Ga0058901_1575802	Not Available	539
3300004604|Ga0068943_1277658	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580
3300005176|Ga0066679_10559030	All Organisms → cellular organisms → Bacteria	746
3300005332|Ga0066388_100352369	Not Available	2118
3300005332|Ga0066388_100729968	Not Available	1593
3300005467|Ga0070706_100455414	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1190
3300005546|Ga0070696_100952295	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	715
3300005560|Ga0066670_10163001	All Organisms → cellular organisms → Bacteria	1313
3300005568|Ga0066703_10260564	Not Available	1052
3300005764|Ga0066903_102804811	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	945
3300005994|Ga0066789_10218664	Not Available	802
3300005995|Ga0066790_10202842	Not Available	847
3300006052|Ga0075029_100148027	Not Available	1442
3300006162|Ga0075030_101031226	Not Available	647
3300006173|Ga0070716_100978838	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	667
3300006893|Ga0073928_11020836	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562
3300006954|Ga0079219_11057741	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682
3300007255|Ga0099791_10670763	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509
3300007258|Ga0099793_10568370	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567
3300009090|Ga0099827_11372390	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615
3300009524|Ga0116225_1268705	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	763
3300009525|Ga0116220_10356300	All Organisms → cellular organisms → Bacteria	650
3300009839|Ga0116223_10819956	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532
3300010048|Ga0126373_10637252	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1121
3300010154|Ga0127503_10990505	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565
3300010323|Ga0134086_10134254	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	894
3300010358|Ga0126370_10048196	Not Available	2691
3300010366|Ga0126379_12308391	Not Available	638
3300011269|Ga0137392_10959099	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	703
3300011270|Ga0137391_11116757	Not Available	636
3300012096|Ga0137389_11291197	Not Available	623
3300012200|Ga0137382_10261871	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1200
3300012202|Ga0137363_11783552	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508
3300012203|Ga0137399_11335886	Not Available	602
3300012205|Ga0137362_11033004	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	699
3300012351|Ga0137386_11231810	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522
3300012363|Ga0137390_10964634	Not Available	805
3300012399|Ga0134061_1092072	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	840
3300012401|Ga0134055_1333192	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604
3300012922|Ga0137394_10696641	All Organisms → cellular organisms → Bacteria → Acidobacteria	855
3300012925|Ga0137419_11804918	Not Available	523
3300012927|Ga0137416_12256310	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501
3300012930|Ga0137407_11150729	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	736
3300012944|Ga0137410_10208401	All Organisms → cellular organisms → Bacteria → Acidobacteria	1516
3300012961|Ga0164302_10748437	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	731
3300013308|Ga0157375_13547563	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519
3300015054|Ga0137420_1255696	Not Available	1168
3300015054|Ga0137420_1305472	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1010
3300015075|Ga0167636_1043797	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510
3300015241|Ga0137418_10858158	Not Available	673
3300016341|Ga0182035_11168895	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	686
3300016404|Ga0182037_11446010	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609
3300017928|Ga0187806_1056976	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1196
3300018042|Ga0187871_10745325	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546
3300018062|Ga0187784_10862299	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	721
3300019186|Ga0184588_107470	Not Available	533
3300019187|Ga0184584_100888	Not Available	579
3300019188|Ga0184599_115526	Not Available	595
3300019789|Ga0137408_1439798	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5299
3300020004|Ga0193755_1126774	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	792
3300020579|Ga0210407_10869753	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	692
3300020580|Ga0210403_10947279	Not Available	676
3300021151|Ga0179584_1434197	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	805
3300021168|Ga0210406_11143578	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570
3300021170|Ga0210400_10072133	All Organisms → cellular organisms → Bacteria → Acidobacteria	2706
3300021404|Ga0210389_11186060	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588
3300021420|Ga0210394_10816051	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	814
3300021444|Ga0213878_10401343	Not Available	597
3300021478|Ga0210402_10016340	All Organisms → cellular organisms → Bacteria	6355
3300021560|Ga0126371_11508130	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	800
3300022507|Ga0222729_1072806	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509
3300022530|Ga0242658_1064708	Not Available	807
3300022721|Ga0242666_1003961	Not Available	2231
3300025919|Ga0207657_10635124	Not Available	832
3300025938|Ga0207704_11699957	Not Available	542
3300025942|Ga0207689_11051941	Not Available	686
3300026317|Ga0209154_1033993	Not Available	2329
3300026334|Ga0209377_1230658	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609
3300026371|Ga0257179_1007955	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1055
3300026377|Ga0257171_1008673	Not Available	1641
3300026446|Ga0257178_1019310	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	805
3300026480|Ga0257177_1017915	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	988
3300026490|Ga0257153_1024005	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1254
3300026507|Ga0257165_1069347	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	644
3300026537|Ga0209157_1130491	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1152
3300026552|Ga0209577_10451595	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	894
3300026552|Ga0209577_10853567	Not Available	510
3300027109|Ga0208603_1004648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas aeruginosa group → Pseudomonas aeruginosa	2283
3300027643|Ga0209076_1000121	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	10217
3300027645|Ga0209117_1171466	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558
3300027655|Ga0209388_1034964	Not Available	1443
3300027669|Ga0208981_1095676	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	757
3300027671|Ga0209588_1237585	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560
3300027703|Ga0207862_1026869	All Organisms → cellular organisms → Bacteria	1725
3300027846|Ga0209180_10807215	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502
3300027889|Ga0209380_10065255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas aeruginosa group → Pseudomonas aeruginosa	2074
3300028047|Ga0209526_10676707	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	652
3300028806|Ga0302221_10293255	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	709
3300030545|Ga0210271_10109180	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	934
3300030849|Ga0075393_10983584	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	666
3300031128|Ga0170823_16277646	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	672
3300031231|Ga0170824_105295896	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	693
3300031446|Ga0170820_12561325	Not Available	2490
3300031474|Ga0170818_107659826	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	714
3300031679|Ga0318561_10563322	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627
3300031718|Ga0307474_10939794	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	684
3300031724|Ga0318500_10040874	All Organisms → cellular organisms → Bacteria	1921
3300031740|Ga0307468_100512881	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	954
3300031740|Ga0307468_101026244	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	728
3300031771|Ga0318546_11239081	Not Available	524
3300031777|Ga0318543_10070723	All Organisms → cellular organisms → Bacteria	1462
3300031819|Ga0318568_10771801	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597
3300031833|Ga0310917_10863626	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610
3300031912|Ga0306921_10920409	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	991
3300031912|Ga0306921_12383531	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552
3300031962|Ga0307479_10795328	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	921
3300031962|Ga0307479_11637116	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598
3300031981|Ga0318531_10120787	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1163
3300032025|Ga0318507_10440982	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567
3300032039|Ga0318559_10296850	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	750
3300032044|Ga0318558_10199408	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	976
3300032063|Ga0318504_10458671	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609
3300032091|Ga0318577_10289366	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	784
3300032160|Ga0311301_10162511	All Organisms → cellular organisms → Bacteria	3982
3300032174|Ga0307470_10091713	All Organisms → cellular organisms → Bacteria	1712
3300033290|Ga0318519_10478994	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	748

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.01%
Host-Associated	Host-Associated	2.99%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.54%
Aquatic	Environmental → Aquatic	4.48%
Plants	Host-Associated → Plants	2.99%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.79%
Freshwater	Environmental → Aquatic → Freshwater	2.24%
Sediment	Environmental → Aquatic → Sediment	1.49%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.49%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.49%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.75%
Peat	Environmental → Terrestrial → Peat	0.75%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.87%
Loam	Environmental → Terrestrial → Soil → Loam	12.69%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.24%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.49%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.49%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.49%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.75%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.75%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.75%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.75%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.58%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	33.58%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.45%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.21%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.24%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.49%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.49%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.49%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.75%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.75%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.75%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.75%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.75%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.75%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.75%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.75%

Habitat

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.13%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	19.40%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.97%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.73%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.99%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.99%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.99%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.24%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.24%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.49%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.49%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.49%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.49%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.75%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.75%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.75%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.75%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.75%
Glacier Forefield Soils	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soils	0.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.75%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.75%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.75%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.75%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.75%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.75%

Associated Samples

Taxon OID	Sample Name	Habitat Type
2209111019	Grass soil microbial communities from Rothamsted Park, UK - FP1 and FP2 (Mercury 0.2g/kg) assembled	Environmental
3300001412	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental
3300002909	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm	Environmental
3300002910	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm	Environmental
3300004120	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF238 (Metagenome Metatranscriptome)	Environmental
3300004604	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 31 (Metagenome Metatranscriptome)	Environmental
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental
3300012399	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental
3300012401	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental
3300015075	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G5C, Northern proglacial tributary margin, adjacent to top of river)	Environmental
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental
3300019186	Soil microbial communities from Bohemian Forest, Czech Republic ? CSE3 metaT (Metagenome Metatranscriptome)	Environmental
3300019187	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU2 metaT (Metagenome Metatranscriptome)	Environmental
3300019188	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZE2 metaT (Metagenome Metatranscriptome)	Environmental
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental
3300021151	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental
3300022507	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-M (Metagenome Metatranscriptome)	Environmental
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental
3300022721	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental
3300026371	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-B	Environmental
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental
3300026446	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-B	Environmental
3300026480	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-B	Environmental
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental
3300026507	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-B	Environmental
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental
3300027109	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes)	Environmental
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental
3300027669	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)	Environmental
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental
3300028806	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1	Environmental
3300030545	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO142-VCO033SO (Eukaryote Community Metatranscriptome)	Environmental
3300030849	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB4 Emin (Eukaryote Community Metatranscriptome)	Environmental
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2221908558	2209111019	Grass Soil	MQEEPEASVLTARRAPQHVRLFSADDAYEHLCILTLL
JGI20173J14856_10309152	3300001412	Arctic Peat Soil	MTEEWEASVPTARRAPQHVRLFPGDDAYEHLCILTLLPSLGPLHLMLADA
JGI12630J15595_100511842	3300001545	Forest Soil	MTEKPEASVLTARRAAQHFRLSSADDAWEHLYILTVRS
JGI12630J15595_100927842	3300001545	Forest Soil	MTEEQEASVLTARRAAQHFRLSSADDAYEHLYILTLLSSLGPLRLMLADTP*
JGI12635J15846_106243841	3300001593	Forest Soil	MTEKSEASVLTARRAAQHFRLSSADDAYEHLYILTV
JGI12053J15887_106421931	3300001661	Forest Soil	MTENPEASVLTARRAAQHFRLFRANDAYEHLCILTLLPSLAPLHLMLADT
JGI25388J43891_10082041	3300002909	Grasslands Soil	MTENPEASVLTARRAPQHVRLFSADDAYEHLCILTLLPSL
JGI25615J43890_10039822	3300002910	Grasslands Soil	MTENPEASVLTAKRAPQHIRLSRANDAYEHLCILTLLPSL
Ga0058901_15758021	3300004120	Forest Soil	MTEKPEASVLTARRAAQHFRLSSPDDTYEHLYILIVRSSLGPSPPNAGRYTV
Ga0068943_12776581	3300004604	Peatlands Soil	MTEYEEASVLTAKRAAQHVRLSRRNDAYEHLCILTLPSSL
Ga0066679_105590301	3300005176	Soil	MRRQCCLPMTENPEASVLTAKRAPQHIRLSRANDAYEHLCILTLL
Ga0066388_1003523691	3300005332	Tropical Forest Soil	MTENPEASVLTATRAAQHFRLFRANDAYEHLCILTLLPSLAPLHLMLA
Ga0066388_1007299681	3300005332	Tropical Forest Soil	MAENPEASALTATRAAQHFRLFRANDAYEHLCILTLLPSL
Ga0070706_1004554141	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MTENPEASVLTATRAAQHFRLFRANDAYEHLCILTLLPSLAPLHLMLADTP
Ga0070696_1009522951	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MTENPEASVLIARRAAQHVRFFRANDAYEHLCILTLLPSLAPL
Ga0066670_101630011	3300005560	Soil	MTENPEASVPTATRAAQHFRLFRANDAYEHLCILTLLPSLAPLHLMLAD
Ga0066703_102605644	3300005568	Soil	MTEKPEASVLTARRAAQHFRLFRANDAYEHLCILTLLP
Ga0066903_1028048112	3300005764	Tropical Forest Soil	MAENPEASALTATRAAQHFRLFRANDAYEHLCILTLLPSLAPLHLMLA
Ga0066789_102186643	3300005994	Soil	MTEKPEASVPTARRAAQHFRLSSADDAYEHLYILTLRPSLGPLP
Ga0066790_102028422	3300005995	Soil	MAEDPEASALTARRAAQHVRLSSADDACEHLYILIV
Ga0075029_1001480272	3300006052	Watersheds	MTENPEASVLTARRAAQHFRLFRANDAYEHLCILTLL
Ga0075030_1010312262	3300006162	Watersheds	MAEDPEASALTARRAAQYFRLSSADDACEHLYILTVRSSLG
Ga0070716_1009788381	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MTENPEASVLTARRAAQHFRLFRANDAYEHLCILTLLPSLAPLHLM
Ga0073928_110208361	3300006893	Iron-Sulfur Acid Spring	MTEEPEASVLTARRAAQHVRLSSRDDAYEHLCILTLLPSLGPLRLMLAD
Ga0079219_110577411	3300006954	Agricultural Soil	MTENPEASVLTATRAAQHFRLFRANDAYEHLCILTLLPSLAPLHLMLADA
Ga0099791_106707632	3300007255	Vadose Zone Soil	MNENPEASVLTAKRAAQHVRLSRANDAYEHLCILTLLPSLAPLHLML
Ga0099793_105683702	3300007258	Vadose Zone Soil	MTEYEEASVLTAKRAAQHIRLSRGNDVYEHLCILTLLP
Ga0099827_113723901	3300009090	Vadose Zone Soil	MTEDPEASVLTARRAPQHVRLSSADDAYEHLCILTLLPSLAP
Ga0116225_12687051	3300009524	Peatlands Soil	MAEKPKVSVLIAKRAAQHVRLSRRNDAYEHLCILTLPSSLGPLHLML
Ga0116220_103563001	3300009525	Peatlands Soil	MTEKPKVSVLIAKRAAQHVRLSRANCAYKHLCILTLLSSLAP
Ga0116223_108199562	3300009839	Peatlands Soil	MTENPEASVLTARRAAQHFRLFRANDAYEHLCILTLLPSLAPLHLMLA
Ga0126373_106372522	3300010048	Tropical Forest Soil	MTEDPEVSVLIAKRAAQHVRLSRANGAYEHLCILTLLPSLAPLHL
Ga0127503_109905051	3300010154	Soil	MTEYAEASVLTARRAAQHLRLSDRDDAYEHLCILTLLSSLGPSPPYA
Ga0134086_101342542	3300010323	Grasslands Soil	MTENPEASVLTARRAPQHVRLFSADDAYEHLCILTLLPSLAPLHLML
Ga0126370_100481962	3300010358	Tropical Forest Soil	MTEDPEVSVLIATRAAQHVRLSRANGAYEHLCILTLLP
Ga0126379_123083911	3300010366	Tropical Forest Soil	MTEDPEASVLTARRAPQHVRLSSADDAYEHLCILT
Ga0137392_109590992	3300011269	Vadose Zone Soil	MRRQCCLPMTENPEASVLTAKRAPQHIRLSRANDAYEHLCILTLLPSLAPL
Ga0137391_111167572	3300011270	Vadose Zone Soil	MAEDPEASVLTATRAAQHVRLFRANDAYEHLYILTIRP
Ga0137389_112911971	3300012096	Vadose Zone Soil	MAEDPEASALTARRAAQHVRLSSADDACEHLYILTIR
Ga0137382_102618711	3300012200	Vadose Zone Soil	MTEKPEASVLTARRAAQHFRLSSADDAYEHLYILIVRSS
Ga0137363_117835521	3300012202	Vadose Zone Soil	MRRQCCLPMTENQEASVLTARRAAQHVRLFRANDAYEHLCILTL
Ga0137399_113358861	3300012203	Vadose Zone Soil	MKEDSEASVLTAKRAAQHVRLSRANDAYECLCILTIL
Ga0137362_110330042	3300012205	Vadose Zone Soil	MKEDPEVSVLTARRAAQHVRLSSADDAYEHLCILTLLSSL
Ga0137386_112318101	3300012351	Vadose Zone Soil	MTENPEASVLTARRAPQHVRLFSADDAYEHLCILTLLPSLAPLHLMLADTPW
Ga0137390_109646341	3300012363	Vadose Zone Soil	MAEDPEASALTARRAAQHVRLSSADDAYEHLNILTPY
Ga0134061_10920722	3300012399	Grasslands Soil	MTEYEEASVLTAKRAAQHIRLSRGNDVYEHLCILTLLSSLGL
Ga0134055_13331922	3300012401	Grasslands Soil	MTEYEEASVLTAKRAAQHIRLSRDNDVYEHLCILTLLSS
Ga0137394_106966411	3300012922	Vadose Zone Soil	MTEKPEASVLTARRATQHFRLSSDDDAYEHLYILI
Ga0137419_118049182	3300012925	Vadose Zone Soil	MTEKPEASVLTARRATQHFRLSSDDDAYEHLYILIVRS
Ga0137416_122563101	3300012927	Vadose Zone Soil	MTENQEASVLTARRAAQHFRLFRANDAYEHLCILTLLPSLAPLHLMLADTPW
Ga0137407_111507291	3300012930	Vadose Zone Soil	MAEEPEASVLTARRAAQHFRLSSADDACEHLYILI
Ga0137410_102084013	3300012944	Vadose Zone Soil	MNENPEASVLIAKRAAQHVRLSSADHAYEHLYILSATTKP
Ga0164302_107484371	3300012961	Soil	MKEDPEVSVLTARRAAQHVRLSSADDAYEHLCILTLLPSLAPLHLMLADT
Ga0157375_135475631	3300013308	Miscanthus Rhizosphere	MTENPEASVLTARRAPQHVRLFSADDAYEHLCILTL
Ga0137420_12556962	3300015054	Vadose Zone Soil	MRRQCYLPMTKDPEASVLTARRAPQHVRLSSADDAYEHLCILTLLPSLAPL
Ga0137420_13054722	3300015054	Vadose Zone Soil	MTEYEEASVLTAKRAAQHIRLSRGNDVYEHLCILTLL
Ga0167636_10437971	3300015075	Glacier Forefield Soils	MTENPEASVLTARRAAQHFRLFSADDAYEHLCILTLLPSLALLHL
Ga0137418_108581582	3300015241	Vadose Zone Soil	MKEDSEASVLTAKRAAQHVRLSRANDAYECLCILTIQS
Ga0182035_111688951	3300016341	Soil	MTEYIEASVLTARRAAQHVRLSDRDDAYEHLCILTLLSS
Ga0182037_114460101	3300016404	Soil	MTEDPEVSVLTAKRAAQHVRLSRANDAYEHLCILTL
Ga0187806_10569762	3300017928	Freshwater Sediment	MTEDPEASVLTARRASQHVRLSSADDAYEHLCILTLLPSLAPLHLMLAD
Ga0187871_107453252	3300018042	Peatland	MTEEQEASVLTARRAAQHFRLSSADDAYEHLCILTV
Ga0187784_108622993	3300018062	Tropical Peatland	MTEDSETSVLTARRAPQHIRLSSADDAYEHLCILT
Ga0184588_1074701	3300019186	Soil	MAEEPEASALTARRAAQHFRLSSRDDACEHLYILIVRSS
Ga0184584_1008881	3300019187	Soil	MTEKPEASVLTARRAAQHFRLSSRDDAYEHLYILTVRSSLGPS
Ga0184599_1155261	3300019188	Soil	MTEKPEASVLTARRAAQHFRLSSRDDACEHLYILIVRSSLGP
Ga0137408_14397982	3300019789	Vadose Zone Soil	MKEDSEASVLTARRAAQHVRLSRDNDAYERLCILTVLSRLARLQGTLPVE
Ga0193755_11267742	3300020004	Soil	MTEKPEASVLTARRAAQHVRLSSADDAYEHLRILTL
Ga0210407_108697531	3300020579	Soil	MTEKPEASVLTARRAAQHVRLSSADDAYEHLCILTLLSSLGPL
Ga0210403_109472791	3300020580	Soil	MTEKPEASVLTARRAAQHFRLSSADDAYEHLDILIIQS
Ga0179584_14341972	3300021151	Vadose Zone Soil	MRRQCCLPMTEEPEASVLTATRATQHVRLFRANDAYEHLYILTVLSSLA
Ga0210406_111435781	3300021168	Soil	MTENPEASVLTATRAAQHFRLFRANDAYEHLCILTLL
Ga0210400_100721331	3300021170	Soil	MTENPEASVLTATRAAQHFRLFRANDAYEHLCILTLLP
Ga0210389_111860601	3300021404	Soil	MTENPEASVLTATRAAQHFRLFRANDAYEHLCILTVLSSL
Ga0210394_108160511	3300021420	Soil	MTEEPEASVLTAKRAAQHVRLSRANDAYEHLCILTLLPSL
Ga0213878_104013432	3300021444	Bulk Soil	MTENPEASVLTAKRAPQHIRLSRANDAYEHLCILSLLPSL
Ga0210402_100163401	3300021478	Soil	MRRQCCLPMTENPEASVLTAKRAAQHIRPSRANDAYETFVYSDP
Ga0126371_115081302	3300021560	Tropical Forest Soil	MTENPEASVLTATRAAQHFRLFRANDAYEHLCILTLLPSLAPLHLMLAD
Ga0222729_10728062	3300022507	Soil	MTEYAEASVLTARRAAQHLRLSDRDDAYEHLCILALL
Ga0242658_10647081	3300022530	Soil	MAEDSEASALTAKRAAQHFRLSSRDDAYEHLYILIIRSSLGPSPPNAGRYTV
Ga0242666_10039613	3300022721	Soil	MNENPEASVLTAKRAAQHIRLSRANDASERLCILTILSSLAPLHLMLA
Ga0207657_106351241	3300025919	Corn Rhizosphere	MTEKPGASVLTARRAAKIFRISSRDDAYEHLYILIVRSSLGPL
Ga0207704_116999571	3300025938	Miscanthus Rhizosphere	MTEKPGASVLTARRAAQHFRLSSRDDAYEHLYILIVRSSLGPLHLML
Ga0207689_110519412	3300025942	Miscanthus Rhizosphere	MTEKPEASVLTARRAAQHFRLSSRDDAYEHLYILIVRSSLGPLHLM
Ga0209154_10339933	3300026317	Soil	MRRQCYLPMTENPEASVLTAKRAPQHIRLSRANDAYEHLCILTLLPSL
Ga0209377_12306582	3300026334	Soil	MTENPEASVLTAKRAPQHIRLSRANDACEHLCILTLLPSLAPL
Ga0257179_10079552	3300026371	Soil	MTEKPEASVLTARRAAQHFRLFRANDAYEHLCILTLLSSLGP
Ga0257171_10086731	3300026377	Soil	MTEEPEASALTARRAAQHLRLSSADDAYEHLCILTLL
Ga0257178_10193102	3300026446	Soil	MTEEPEASALTARRAAQHLRLSSADDAYEHLCILTLLPSLAPLHLMLADTP
Ga0257177_10179151	3300026480	Soil	MRRQCCLPMTENPEASVLTAKRAPQHIRLSRANDAYEHLYILTL
Ga0257153_10240052	3300026490	Soil	MKEDPEASVLTAKRAAQHVRLSRANDAYEHLCILTLLSSLAPLHLMLA
Ga0257165_10693471	3300026507	Soil	MRRQCCLPMTENPEASVLTAKRAAQHVRLSRANDAYEHLCILTLLPSLAPLH
Ga0209157_11304911	3300026537	Soil	MTEYEEASVLTAKRAAQHIRLSRGNDVYEHLCILTLLSSL
Ga0209577_104515952	3300026552	Soil	MTENPEASVLTARRAPQHVRLFSADDAYEHLCILTLLPSLAPL
Ga0209577_108535671	3300026552	Soil	MTEKPEASVLTARRAPQHIRLISADDAYEHLCILTVLSS
Ga0208603_10046481	3300027109	Forest Soil	MKEDPEVSVLTARRAAQHVRLSSADDAYEHLCILTLLPSLAPLH
Ga0209076_10001216	3300027643	Vadose Zone Soil	MTENPEASVLTAKRAPQHIRLSRANDAYEHLCILTLL
Ga0209117_11714661	3300027645	Forest Soil	MKEDSEASVLTARRAAQHVRLSSADDAYEHLCILTLLPSLAP
Ga0209388_10349642	3300027655	Vadose Zone Soil	MNENPEASVLTAKRAAQHVRLSRANDAYEHLCILTLLPSLAPLHLMLA
Ga0208981_10956761	3300027669	Forest Soil	MTEYEEASVLTAKRAAQHIRLSRGNDVYEHLCILTLLSSLGPLHLML
Ga0209588_12375851	3300027671	Vadose Zone Soil	MTEKPEASVLTARRAAQHFRLFRANDAYEHLCILTLLSSLGPLHLMLAD
Ga0207862_10268691	3300027703	Tropical Forest Soil	MTEYAEASVLTARRAAQHVRLSDRDDAYEHLCILTLLSSLGPSPP
Ga0209180_108072152	3300027846	Vadose Zone Soil	MTEDPEASVLTARRAAQHVRLSSADDAYEHLCILTLLPSLAPLH
Ga0209380_100652552	3300027889	Soil	MKEDPEVSVLTARRAAQHVRLSSADDAYEHLCILTLLPSLAPLHLMLA
Ga0209526_106767071	3300028047	Forest Soil	MTEDPEVSVLIAKRAAQHVRLSRANDAYEHLCILTLLPSLAP
Ga0302221_102932552	3300028806	Palsa	MTENPEASALTAKRAAQHFRLFRANDAYEHLRILTLLPSLAPL
Ga0210271_101091801	3300030545	Soil	MTKEPEASVLTARRAAQHVRLSSRDDAYEHLCILTLPSSL
Ga0075393_109835842	3300030849	Soil	MTEEPEASALTARRAAQHVRLSSADDAYEHLCILTLLPSLA
Ga0170823_162776461	3300031128	Forest Soil	MTENPEASVLTARRAAQYFRLFRANDAYEHLCILTLLPSLAPLHLML
Ga0170824_1052958961	3300031231	Forest Soil	MAEEPEASALTATRAAQHVRLFRANGAYEHLCILTLLPSLAPLHLM
Ga0170820_125613251	3300031446	Forest Soil	MAEDSEDSALTARRAAQHFRLSSRDDAYEHLYILIVRPSLG
Ga0170818_1076598261	3300031474	Forest Soil	MKEDPEASVLTAKRAAQHVRLSRANDAYEHLCILTLLPSLAPLH
Ga0318561_105633221	3300031679	Soil	MTEDPEVSVLTAKRAAQHVRLSRANDAYEHLCILTLLSS
Ga0307474_109397942	3300031718	Hardwood Forest Soil	MTENPEASVLTARRAPQHVRLFSADDAYEHLCILAV
Ga0318500_100408742	3300031724	Soil	MRRQCCLPMAEDPEASVLTARRAPQHVRLSSADDAYEHLCILTLLPSLA
Ga0307468_1005128811	3300031740	Hardwood Forest Soil	MTENPEASVLTATRAAQHFRLFRANDAYEHLCILTLLPSLAP
Ga0307468_1010262442	3300031740	Hardwood Forest Soil	MTENPEASVPTATRAAQHFRLFRANDAYEHLCILTLLPSLAPLHLM
Ga0318546_112390811	3300031771	Soil	MAEDPEASVLTARRAPQHVRLSSADDAYEHLCILTLLPSLAPLHL
Ga0318543_100707231	3300031777	Soil	MAEDPEASVLTARRAPQHVRLSSADDAYEHLCILTLLPSLAPLHLMLADTP
Ga0318568_107718012	3300031819	Soil	MTEDPEVSVLTAKRAAQHVRLSRANDAYEHLYILTLPS
Ga0310917_108636261	3300031833	Soil	MRRQCCLPTTEDPEASILTARKAPQHIRLSSADDAYEHLCILTLLPSLAPLHL
Ga0306921_109204091	3300031912	Soil	MAEDPEASVLTARRAPQHVRLSSADDAYEHLCILTLLPSLAPLHLMLA
Ga0306921_123835312	3300031912	Soil	MRRQCCLPTTEDPEASILTARKAPQHIRLSSADDAYEHLCILTLL
Ga0307479_107953281	3300031962	Hardwood Forest Soil	MTEKPEASVLTARRAAQHFRLSSADDACEHLYILTV
Ga0307479_116371161	3300031962	Hardwood Forest Soil	MRRQCCLPTIENPEVSVLTAKRAPQHIRLPRANDAYEHLCILTLLPSL
Ga0318531_101207871	3300031981	Soil	MTEDPEVSVLTAKRAAQHVRLSRANDAYEHLCILTLLSSLAPLHLMLAD
Ga0318507_104409821	3300032025	Soil	MRRQCCLPTTEDPEASVLTARRAPQHIRLSSADDAYEHLCILTLLPSLAPLH
Ga0318559_102968501	3300032039	Soil	MTEYTQASVLTARRAAQHVRLSDRDDAYEHLCILTLLSSLG
Ga0318558_101994082	3300032044	Soil	MTEDPEVSVLIAKRAAQHVRLSRANGAYEHLRILTLLPSLAPLHLMLADT
Ga0318504_104586711	3300032063	Soil	MTEDPEVSVLIAKRAAQHVRLSRANGAYEHLCILTLLPSLAPLHLMLA
Ga0318577_102893661	3300032091	Soil	MAEDPEASVLTARRAPQHVRLSSADDAYEHLCILTLLPSLAPLHLMLADT
Ga0311301_101625111	3300032160	Peatlands Soil	MTEEPEASVLTATRAAQHVRLFRANDAYEHLYILT
Ga0307470_100917133	3300032174	Hardwood Forest Soil	MTENPEASVLTARRAAQHFRLFSADDAYEHLYILTLLPSLAP
Ga0318519_104789942	3300033290	Soil	MTEYAEASVLTARRAAQHLRLSDRDDAYEHLCILALLPSLG