Metagenome / Metatranscriptome Family F059247

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F059247
Family Type	Metagenome / Metatranscriptome
Number of Sequences	134
Average Sequence Length	47 residues
Representative Sequence	MSEKGQSRKSMFVVKNMEELRRLYDSDTPVLAYAFKRRTVEGWTPEHS
Number of Associated Samples	110
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	97.74 %
% of genes near scaffold ends (potentially truncated)	94.78 %
% of genes from short scaffolds (< 2000 bps)	91.04 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.26

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (79.851 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (21.642 % of family members)
Environment Ontology (ENVO)	Unclassified (37.313 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (61.194 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.95% β-sheet: 0.00% Coil/Unstructured: 71.05%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.26
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.26
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF00753	Lactamase_B	35.07
PF01872	RibD_C	20.15
PF04389	Peptidase_M28	1.49
PF00248	Aldo_ket_red	0.75
PF12697	Abhydrolase_6	0.75
PF13620	CarboxypepD_reg	0.75
PF02518	HATPase_c	0.75
PF00578	AhpC-TSA	0.75
PF04542	Sigma70_r2	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	20.15
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	20.15
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.75
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.75
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.75
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	79.85 %
Unclassified	root	N/A	20.15 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	79.85 %
Unclassified	root	N/A	20.15 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	79.85 %
Unclassified	root	N/A	20.15 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	50.00 %
Unclassified	root	N/A	20.15 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	14.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.15 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	14.18 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.73 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.49 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.15 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	14.18 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.24 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.49 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	1.49 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.15 %
Sphingobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia	5.97 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.24 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	1.49 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.49 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.15 %
Sphingobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	5.97 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.49 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.49 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.75 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.15 %
Sphingobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae	5.97 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.49 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.49 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.75 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.15 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.49 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.49 %
Mucilaginibacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → Mucilaginibacter	0.75 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.75 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.15 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.49 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.49 %
Mucilaginibacter ginsenosidivorans	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → Mucilaginibacter → Mucilaginibacter ginsenosidivorans	0.75 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.75 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001131\|JGI12631J13338_1033941	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	521	Open in IMG/M
3300001182\|JGI12668J13544_1004850	Not Available	731	Open in IMG/M
3300002245\|JGIcombinedJ26739_100993618	Not Available	724	Open in IMG/M
3300004267\|Ga0066396_10045405	Not Available	690	Open in IMG/M
3300005434\|Ga0070709_10340515	All Organisms → cellular organisms → Bacteria → Acidobacteria	1105	Open in IMG/M
3300005436\|Ga0070713_100270979	All Organisms → cellular organisms → Bacteria	1555	Open in IMG/M
3300005451\|Ga0066681_10003495	All Organisms → cellular organisms → Bacteria	6889	Open in IMG/M
3300005538\|Ga0070731_10102998	All Organisms → cellular organisms → Bacteria	1891	Open in IMG/M
3300005541\|Ga0070733_10379216	Not Available	940	Open in IMG/M
3300005591\|Ga0070761_10073895	All Organisms → cellular organisms → Bacteria → Acidobacteria	1936	Open in IMG/M
3300005591\|Ga0070761_10509965	All Organisms → cellular organisms → Bacteria → Acidobacteria	742	Open in IMG/M
3300005591\|Ga0070761_10669369	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → Mucilaginibacter → Mucilaginibacter ginsenosidivorans	649	Open in IMG/M
3300005602\|Ga0070762_10239895	All Organisms → cellular organisms → Bacteria → Acidobacteria	1123	Open in IMG/M
3300005602\|Ga0070762_10329029	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	969	Open in IMG/M
3300005764\|Ga0066903_103818144	Not Available	809	Open in IMG/M
3300005764\|Ga0066903_105984911	Not Available	637	Open in IMG/M
3300005921\|Ga0070766_10886918	All Organisms → cellular organisms → Bacteria → Acidobacteria	610	Open in IMG/M
3300006173\|Ga0070716_101479093	All Organisms → cellular organisms → Bacteria → Acidobacteria	554	Open in IMG/M
3300007788\|Ga0099795_10042937	All Organisms → cellular organisms → Bacteria	1616	Open in IMG/M
3300009088\|Ga0099830_11698479	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae	527	Open in IMG/M
3300009143\|Ga0099792_10690868	All Organisms → cellular organisms → Bacteria → Acidobacteria	659	Open in IMG/M
3300009143\|Ga0099792_10753966	All Organisms → cellular organisms → Bacteria → Acidobacteria	634	Open in IMG/M
3300009177\|Ga0105248_10985457	All Organisms → cellular organisms → Bacteria → Acidobacteria	952	Open in IMG/M
3300009523\|Ga0116221_1236754	Not Available	789	Open in IMG/M
3300009792\|Ga0126374_10720462	All Organisms → cellular organisms → Bacteria → Acidobacteria	752	Open in IMG/M
3300010046\|Ga0126384_12055145	Not Available	547	Open in IMG/M
3300010048\|Ga0126373_10835339	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	984	Open in IMG/M
3300010048\|Ga0126373_11905888	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae	657	Open in IMG/M
3300010341\|Ga0074045_10652239	Not Available	670	Open in IMG/M
3300010358\|Ga0126370_10005065	All Organisms → cellular organisms → Bacteria → Acidobacteria	6579	Open in IMG/M
3300010358\|Ga0126370_10725042	All Organisms → cellular organisms → Bacteria → Acidobacteria	877	Open in IMG/M
3300010359\|Ga0126376_12715969	All Organisms → cellular organisms → Bacteria → Acidobacteria	544	Open in IMG/M
3300010361\|Ga0126378_10226556	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1955	Open in IMG/M
3300010366\|Ga0126379_10979460	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	950	Open in IMG/M
3300010376\|Ga0126381_101431940	All Organisms → cellular organisms → Bacteria → Acidobacteria	999	Open in IMG/M
3300010376\|Ga0126381_102507896	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	739	Open in IMG/M
3300010398\|Ga0126383_10913390	Not Available	964	Open in IMG/M
3300010403\|Ga0134123_12295187	All Organisms → cellular organisms → Bacteria → Acidobacteria	603	Open in IMG/M
3300011270\|Ga0137391_11165736	All Organisms → cellular organisms → Bacteria → Acidobacteria	618	Open in IMG/M
3300012096\|Ga0137389_11749642	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae	517	Open in IMG/M
3300012918\|Ga0137396_10623191	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300013296\|Ga0157374_11213734	All Organisms → cellular organisms → Bacteria → Acidobacteria	776	Open in IMG/M
3300014164\|Ga0181532_10670375	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	560	Open in IMG/M
3300014168\|Ga0181534_10105001	All Organisms → cellular organisms → Bacteria → Acidobacteria	1418	Open in IMG/M
3300015052\|Ga0137411_1251440	All Organisms → cellular organisms → Bacteria → Acidobacteria	1358	Open in IMG/M
3300015053\|Ga0137405_1178898	All Organisms → cellular organisms → Bacteria	1677	Open in IMG/M
3300015241\|Ga0137418_10394943	All Organisms → cellular organisms → Bacteria → Acidobacteria	1130	Open in IMG/M
3300016341\|Ga0182035_12079282	Not Available	516	Open in IMG/M
3300016387\|Ga0182040_10670131	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	846	Open in IMG/M
3300016387\|Ga0182040_11098705	All Organisms → cellular organisms → Bacteria → Acidobacteria	666	Open in IMG/M
3300016422\|Ga0182039_10635178	All Organisms → cellular organisms → Bacteria → Acidobacteria	936	Open in IMG/M
3300016422\|Ga0182039_10695873	All Organisms → cellular organisms → Bacteria → Acidobacteria	896	Open in IMG/M
3300017822\|Ga0187802_10106606	All Organisms → cellular organisms → Bacteria → Acidobacteria	1056	Open in IMG/M
3300017926\|Ga0187807_1309336	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	526	Open in IMG/M
3300017933\|Ga0187801_10094505	Not Available	1130	Open in IMG/M
3300017933\|Ga0187801_10457045	Not Available	536	Open in IMG/M
3300017942\|Ga0187808_10176489	Not Available	947	Open in IMG/M
3300017942\|Ga0187808_10414144	All Organisms → cellular organisms → Bacteria → Acidobacteria	617	Open in IMG/M
3300017943\|Ga0187819_10109464	All Organisms → cellular organisms → Bacteria	1650	Open in IMG/M
3300017943\|Ga0187819_10291834	All Organisms → cellular organisms → Bacteria → Acidobacteria	949	Open in IMG/M
3300017946\|Ga0187879_10106486	All Organisms → cellular organisms → Bacteria	1605	Open in IMG/M
3300017961\|Ga0187778_10894115	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae	610	Open in IMG/M
3300017961\|Ga0187778_11205634	Not Available	530	Open in IMG/M
3300017974\|Ga0187777_10000563	All Organisms → cellular organisms → Bacteria	25043	Open in IMG/M
3300017975\|Ga0187782_10506420	All Organisms → cellular organisms → Bacteria → Acidobacteria	924	Open in IMG/M
3300017995\|Ga0187816_10005182	All Organisms → cellular organisms → Bacteria → Acidobacteria	4523	Open in IMG/M
3300018012\|Ga0187810_10105434	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300018020\|Ga0187861_10180650	Not Available	954	Open in IMG/M
3300018057\|Ga0187858_10048898	All Organisms → cellular organisms → Bacteria	3053	Open in IMG/M
3300018062\|Ga0187784_10305504	All Organisms → cellular organisms → Bacteria → Acidobacteria	1291	Open in IMG/M
3300018062\|Ga0187784_10728016	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	793	Open in IMG/M
3300020012\|Ga0193732_1021316	All Organisms → cellular organisms → Bacteria → Acidobacteria	1121	Open in IMG/M
3300020062\|Ga0193724_1068183	Not Available	744	Open in IMG/M
3300020579\|Ga0210407_11136231	All Organisms → cellular organisms → Bacteria → Acidobacteria	590	Open in IMG/M
3300020580\|Ga0210403_10274314	Not Available	1382	Open in IMG/M
3300020580\|Ga0210403_10397459	All Organisms → cellular organisms → Bacteria → Acidobacteria	1125	Open in IMG/M
3300020580\|Ga0210403_11203787	All Organisms → cellular organisms → Bacteria → Acidobacteria	583	Open in IMG/M
3300020581\|Ga0210399_10715229	All Organisms → cellular organisms → Bacteria → Acidobacteria	822	Open in IMG/M
3300020582\|Ga0210395_10059983	All Organisms → cellular organisms → Bacteria	2790	Open in IMG/M
3300020583\|Ga0210401_11548549	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	520	Open in IMG/M
3300020583\|Ga0210401_11573878	Not Available	514	Open in IMG/M
3300021046\|Ga0215015_10783157	Not Available	542	Open in IMG/M
3300021088\|Ga0210404_10241288	All Organisms → cellular organisms → Bacteria → Acidobacteria	980	Open in IMG/M
3300021178\|Ga0210408_10457706	Not Available	1015	Open in IMG/M
3300021180\|Ga0210396_11323972	Not Available	598	Open in IMG/M
3300021181\|Ga0210388_11435828	All Organisms → cellular organisms → Bacteria → Acidobacteria	578	Open in IMG/M
3300021181\|Ga0210388_11478897	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	568	Open in IMG/M
3300021402\|Ga0210385_11482749	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	518	Open in IMG/M
3300021403\|Ga0210397_11176062	Not Available	596	Open in IMG/M
3300021404\|Ga0210389_10905623	All Organisms → cellular organisms → Bacteria → Acidobacteria	686	Open in IMG/M
3300021406\|Ga0210386_11257383	All Organisms → cellular organisms → Bacteria → Acidobacteria	624	Open in IMG/M
3300021420\|Ga0210394_11358181	All Organisms → cellular organisms → Bacteria → Acidobacteria	605	Open in IMG/M
3300021432\|Ga0210384_11284878	Not Available	636	Open in IMG/M
3300021475\|Ga0210392_11222887	All Organisms → cellular organisms → Bacteria → Acidobacteria	562	Open in IMG/M
3300021476\|Ga0187846_10024930	All Organisms → cellular organisms → Bacteria	2747	Open in IMG/M
3300021476\|Ga0187846_10407194	Not Available	559	Open in IMG/M
3300021477\|Ga0210398_11598016	All Organisms → cellular organisms → Bacteria → Acidobacteria	505	Open in IMG/M
3300021479\|Ga0210410_10751514	All Organisms → cellular organisms → Bacteria → Acidobacteria	858	Open in IMG/M
3300021560\|Ga0126371_10145822	All Organisms → cellular organisms → Bacteria	2423	Open in IMG/M
3300024251\|Ga0247679_1005189	All Organisms → cellular organisms → Bacteria	2265	Open in IMG/M
3300024288\|Ga0179589_10012906	All Organisms → cellular organisms → Bacteria	2555	Open in IMG/M
3300024330\|Ga0137417_1099228	All Organisms → cellular organisms → Bacteria → Acidobacteria	1075	Open in IMG/M
3300025906\|Ga0207699_10247756	All Organisms → cellular organisms → Bacteria	1227	Open in IMG/M
3300025906\|Ga0207699_10696350	All Organisms → cellular organisms → Bacteria → Acidobacteria	744	Open in IMG/M
3300025916\|Ga0207663_10456972	All Organisms → cellular organisms → Bacteria → Acidobacteria	986	Open in IMG/M
3300025931\|Ga0207644_11453420	All Organisms → cellular organisms → Bacteria → Acidobacteria	576	Open in IMG/M
3300025960\|Ga0207651_11757634	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	558	Open in IMG/M
3300026467\|Ga0257154_1043551	All Organisms → cellular organisms → Bacteria → Acidobacteria	689	Open in IMG/M
3300027109\|Ga0208603_1046003	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae	667	Open in IMG/M
3300027545\|Ga0209008_1131558	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae	553	Open in IMG/M
3300027619\|Ga0209330_1157459	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	511	Open in IMG/M
3300027654\|Ga0209799_1091816	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	687	Open in IMG/M
3300027667\|Ga0209009_1195311	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae	512	Open in IMG/M
3300027826\|Ga0209060_10553814	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	521	Open in IMG/M
3300027853\|Ga0209274_10232711	All Organisms → cellular organisms → Bacteria → Acidobacteria	941	Open in IMG/M
3300027853\|Ga0209274_10315643	All Organisms → cellular organisms → Bacteria → Acidobacteria	804	Open in IMG/M
3300027875\|Ga0209283_10171633	All Organisms → cellular organisms → Bacteria → Acidobacteria	1440	Open in IMG/M
3300027879\|Ga0209169_10403889	All Organisms → cellular organisms → Bacteria → Acidobacteria	718	Open in IMG/M
3300027884\|Ga0209275_10038978	All Organisms → cellular organisms → Bacteria	2232	Open in IMG/M
3300029636\|Ga0222749_10096555	All Organisms → cellular organisms → Bacteria	1382	Open in IMG/M
3300031708\|Ga0310686_112364837	All Organisms → cellular organisms → Bacteria → Acidobacteria	614	Open in IMG/M
3300031708\|Ga0310686_113606490	All Organisms → cellular organisms → Bacteria → Acidobacteria	1341	Open in IMG/M
3300031718\|Ga0307474_10245184	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1371	Open in IMG/M
3300031718\|Ga0307474_11190725	All Organisms → cellular organisms → Bacteria → Acidobacteria	602	Open in IMG/M
3300031720\|Ga0307469_10363441	All Organisms → cellular organisms → Bacteria → Acidobacteria	1220	Open in IMG/M
3300031753\|Ga0307477_10505045	All Organisms → cellular organisms → Bacteria → Acidobacteria	821	Open in IMG/M
3300031941\|Ga0310912_10984749	All Organisms → cellular organisms → Bacteria → Acidobacteria	647	Open in IMG/M
3300031947\|Ga0310909_10917300	All Organisms → cellular organisms → Bacteria → Acidobacteria	719	Open in IMG/M
3300031954\|Ga0306926_11772324	All Organisms → cellular organisms → Bacteria → Acidobacteria	702	Open in IMG/M
3300032059\|Ga0318533_11246168	Not Available	544	Open in IMG/M
3300032180\|Ga0307471_103428643	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300032770\|Ga0335085_10745127	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1084	Open in IMG/M
3300033289\|Ga0310914_10694703	All Organisms → cellular organisms → Bacteria → Acidobacteria	913	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.01%
Host-Associated	Host-Associated	2.99%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.82%
Aquatic	Environmental → Aquatic	11.19%
Plants	Host-Associated → Plants	2.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.33%
Freshwater	Environmental → Aquatic → Freshwater	11.19%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.99%
Cave	Environmental → Terrestrial → Cave	1.49%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.46%
Loam	Environmental → Terrestrial → Soil → Loam	20.90%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	11.19%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.97%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	1.49%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.49%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.49%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	29.85%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	16.42%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	7.46%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.48%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.73%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	1.49%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.49%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.49%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.64%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.70%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	7.46%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	7.46%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.48%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.73%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.99%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.24%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.24%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.49%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	1.49%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.49%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.75%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.75%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001131	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1	Environmental	Open in IMG/M
3300001182	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020012	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s1	Environmental	Open in IMG/M
3300020062	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024251	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK20	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026467	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-A	Environmental	Open in IMG/M
3300027109	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes)	Environmental	Open in IMG/M
3300027545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027619	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027692	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12631J13338_10339412	3300001131	Forest Soil	MSEKGQVRKSMFSVQNMEELGRLYESDTPVLAYDFKRRMLE
JGI12668J13544_10048502	3300001182	Forest Soil	MSEKGQSRKSMFSALKNMEELRRLYDSDTPVLAYEFKRRMVEGWTPEHSHHRGQL
JGIcombinedJ26739_1009936181	3300002245	Forest Soil	MSEKGQSRRSMFSVQNMEELRRLYDSDTPVLAYEFKRRMVEGWTPEHS
Ga0066396_100454052	3300004267	Tropical Forest Soil	MSEKGQPRKSMFSAPNMEELRLLYDSDTPVLAYTFKRRSVEGWTPEHSHHRGQ
Ga0070709_103405152	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSEKGQVGKSMFSVRNMEELRRLYESDTPVLAYDFKRRMVEGWTPEHSHH
Ga0070713_1002709793	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSEKGQVRKSMFSVQNMEELGRLYESDTPVLAYDFKRRMVEGWTPEHS
Ga0066681_100034951	3300005451	Soil	MSEKGQSRKSMFSALNNMEELRRLYDSDTPVLAYAFKRRMVEG
Ga0070731_101029983	3300005538	Surface Soil	MSEKGQSHKSMFSVQNMEELRRLYDSDTPVLAYDFKRRMVE
Ga0070733_103792163	3300005541	Surface Soil	MSEKGQVRKSMFSVQNMEELRRLCESDTPVLAYDIKRRMVEG
Ga0070761_100738954	3300005591	Soil	MSEKGQSRKSMFVAKNMEELRRLYDSDTPVLAYAFKRRTVEGWTPEHSHPRGQL
Ga0070761_105099652	3300005591	Soil	MSEKGQVRKSMFSVQNMEELRRLYESDTPVLAYDFKRRMVEGWTPE
Ga0070761_106693691	3300005591	Soil	MSEKGQSSKSMFVVKNMEELRRLYDSDTPVLAYAFKRRTVEGW
Ga0070762_102398953	3300005602	Soil	MSEKGQPRKSMFSALKNMEELRRLYDSDTPALAYEFKRRMVEGWT
Ga0070762_103290292	3300005602	Soil	MSEKGQSRKSMFSVQNMEELRRLYDSDTPVLAYDFKRRMVEGWTPEHSHHRGQLV
Ga0066903_1038181442	3300005764	Tropical Forest Soil	MSEKGQPRKSMFSAPNMEELRLLYDSDTPVLAYTFKRRSVEGWTPEHSH
Ga0066903_1059849112	3300005764	Tropical Forest Soil	MSEKGQSRKSMFVAQNMEELRRLYDSNTPVLAYAFKRRTVEGWTPEHSH
Ga0070766_108869182	3300005921	Soil	MSEKGQSRQSMFVAKNMEELRRLYDSDTPVLAYAFKRRTVEGWTPEHSHPRGQ
Ga0070716_1014790931	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MSEKGQVRKSMFSVQNMEELRRLYDSDTPVLAYEFKRRMVEGWTPEHSHHR
Ga0099795_100429373	3300007788	Vadose Zone Soil	MSEKGQAQKSMFSVQNMEELRGLYDSDTPVLAYDFKR
Ga0099830_116984792	3300009088	Vadose Zone Soil	MSEKGQSRKSMFSALKNMEELRRLYDSDTPVLAYDFKRRMVEGWTP
Ga0099792_106908682	3300009143	Vadose Zone Soil	MSEKGQVRKSMFSVQNMEELGRLYESDTPVLAYDFKRRMV
Ga0099792_107539662	3300009143	Vadose Zone Soil	MSEKGQAQKSMFSVQNMEELRGLYDSDTPVLAYDFKRRMVEGWTPEHSHH
Ga0105248_109854571	3300009177	Switchgrass Rhizosphere	MSEKGQSRKSMFGAPKDAEGLRKLYDSNIPVLPFAFKRRTVE
Ga0116221_12367542	3300009523	Peatlands Soil	MSEKGQPRKSMFSAPNMEELRLLYDSDTPVLAYTFKRRSVDGWTPAHSHHRGQ
Ga0126374_107204621	3300009792	Tropical Forest Soil	MSEKGQPRKSMFQALRNMEELRRLYDSDTPVLAYAFKRRTVEGWTPEHSHLRGQL
Ga0126384_120551451	3300010046	Tropical Forest Soil	MSEKGQPRKSMFQALKNMEELRRLYDSDTPVLAYAFKRRTVEGWTPEHSHLRGQL
Ga0126373_108353392	3300010048	Tropical Forest Soil	MSEKGQSRKSMFVVKNMEELRRLYDSDTPVLAYAFKRRTVEGWTPEHS
Ga0126373_119058882	3300010048	Tropical Forest Soil	MSEKGQSRKSMFEVKNMEELRRLYDSETPVLAYAFKRRTVEGWTPE
Ga0074045_106522392	3300010341	Bog Forest Soil	MSEKGQSRKSMFSALKNMEELRRLYDSDTPVLAYDFKRRMVEGWTPEHSHH
Ga0126370_100050652	3300010358	Tropical Forest Soil	MSEKGQPRKSMFRALKNFEELRRLYDTDTPVLAYAFKRQTDAFAFPRSQ*
Ga0126370_107250422	3300010358	Tropical Forest Soil	MSEKGQPRKSIFRTLKNFEDLHHLYNTDTPILAYTFKKQTNESW
Ga0126376_127159692	3300010359	Tropical Forest Soil	MSEKGQPRKSMFRALKNFEELRRLYDTDTPVLAYAFK
Ga0126378_102265562	3300010361	Tropical Forest Soil	MSEKGQPRKSMFRALKNFEELRRLYDTDTPVLAYAFKRRTDAFAFPRSQ*
Ga0126379_109794602	3300010366	Tropical Forest Soil	MSEKGQPRKSMFRALKNFEELRRLYETDTPVLAYAFKRRTDAFAFPRSQ*
Ga0126381_1014319402	3300010376	Tropical Forest Soil	MSEKGQPRKSMFRALKNFEELRRLYDTDTPVLAYAFKRQTDEGWT
Ga0126381_1025078961	3300010376	Tropical Forest Soil	MSEKGQPRKSMFQALKNMEELRRLYDSDTPVLAYAFKRRTVEGWTPEHSHLR
Ga0126383_109133901	3300010398	Tropical Forest Soil	MSEKGQSRKSMFVALKNMEELRRLYDSDTPVLAYAFKRRT
Ga0134123_122951872	3300010403	Terrestrial Soil	MSEKGQSRKSMFGAPKDAEGLRKLYDSNIPVLPFAFK
Ga0137391_111657361	3300011270	Vadose Zone Soil	MSEKGQVRKSMFSVQNMEELGRLYESDTPVLAYDFKRRMVEGWTPEH
Ga0137389_117496421	3300012096	Vadose Zone Soil	MSEKGQSRNSMFSALKNMEELRRLYDSATPVLAYEFKRRMVE
Ga0137396_106231912	3300012918	Vadose Zone Soil	MSEKGQFRKSMFSVQNMEELGRLYESDTPVLAYDFKRRMVEGWT
Ga0157374_112137341	3300013296	Miscanthus Rhizosphere	MSEKGQVRKSMFSVQNMEELGRLYESDTPVLAYDFKRRMVEGW
Ga0181532_106703752	3300014164	Bog	MFSVQNMEELRRLYESDTPVLAYDFKRRMVEGWTPEHSHHRGQLVAL
Ga0181534_101050011	3300014168	Bog	MSEKGQSRKSMFVALKNMEELRRLYDSDTPVLAYAF
Ga0137411_12514401	3300015052	Vadose Zone Soil	MSEKGQVRKSMFSVQNMEELGRLYESDTPVLAYDFKRRMVEGWTPEHSHHRRAQS
Ga0137405_11788981	3300015053	Vadose Zone Soil	MSEKGQVRKSMFSVHNMEELGRLYESDTPVLAYDFKRRMVE
Ga0137418_103949432	3300015241	Vadose Zone Soil	MSEKGQVRKSMFSVQNMEELGRLYESDTPVLAYDFKRRMVEGWTPEHSHHRGQL
Ga0182035_120792822	3300016341	Soil	MSEKGQSRKSMFVVKNMEELRRLYDSDTPVLAYAFKRRTVEGWTPEHSHPRGQL
Ga0182040_106701312	3300016387	Soil	MSEKGQVRKSMFWVQNMEEPGRLYESDAPVLAYDFKRRMIEGWESKPLREKHS
Ga0182040_110987051	3300016387	Soil	MSEKGQSRKSMFGALKNMEELRRLYDSDTPVLAYAFKRRTVEGWTPEH
Ga0182039_106351782	3300016422	Soil	MSEKGQSRKSMFVALKNMEELRRLYDSDTPVLAYAFKRRTVEGWTPEHSHPRG
Ga0182039_106958731	3300016422	Soil	MSEKGQSRKSMFVVKNMEELRRLYDSDTPVLAYAFKRRTVEGW
Ga0187802_101066061	3300017822	Freshwater Sediment	MSEKGQVRKSMFSVQNMEELGRLYESDTPVLAYDFKRRMVE
Ga0187807_13093361	3300017926	Freshwater Sediment	MSEKGQPQESMFSVQNMEELRGLYDSDTPVLAYDFKRRMVEGWTPE
Ga0187801_100945051	3300017933	Freshwater Sediment	MSEKGQSRKSMFVALQNMEEVRRLYESDTPVLAYAFKRRTVEGW
Ga0187801_104570452	3300017933	Freshwater Sediment	MSEKGQSRKSMFSVQNMEELARLYQSDTPILAYDFKRRMVEGWTPEHSHHRGQLVAL
Ga0187808_101764893	3300017942	Freshwater Sediment	MSEKGQSRKSMFVALKNMEELRRLYDSDTPVLAYAFKRRTVEGW
Ga0187808_104141441	3300017942	Freshwater Sediment	MSEKGQSRKSMFVVKNVEELRRVYDSDTPVLAYAFERRTVEGWTPEHSHPR
Ga0187819_101094643	3300017943	Freshwater Sediment	MSEKGQVRKPMFSVQNMEELARLYESDTPVLAYDFKRRMVEG
Ga0187819_102918342	3300017943	Freshwater Sediment	MSEKGQPRKSMFSVQNMEELRRLYDTDTPVLAYAFKRQTDEGWTPEHSHAR
Ga0187879_101064863	3300017946	Peatland	MSEKGQPRKSMFSAPNMEELRRLYDSDTPVLAYTFKRRTVEGWTPEHSHHRG
Ga0187778_108941152	3300017961	Tropical Peatland	MSEKGQPCKSMFVALKNMEELRRLYDSDTPVSAYAFKRRTVEGWTPEHSHP
Ga0187778_112056341	3300017961	Tropical Peatland	MLEKGQPRKSMFQALRNMEELRRLYDSDTPVLAYAFKRRRVEGWTP
Ga0187777_1000056328	3300017974	Tropical Peatland	MSEKGQSRKSMFVVKNMEELRRLYDTDTPVLAYAFKRQTDEGWT
Ga0187782_105064202	3300017975	Tropical Peatland	MSEKGQSRKTMFRALKNFEELRRLYDTDTPVLAYAFKRQTDEGWTPE
Ga0187816_100051821	3300017995	Freshwater Sediment	MSEKGQSRKSMFVALQNMEEVRRLYESDTPVLAYAFKRRTVEGWTPEH
Ga0187810_101054344	3300018012	Freshwater Sediment	MSEKGQSRKSMFVALQNMEEVRRLYESDTPVLAYAFKRRTVEGWTPEHSHL
Ga0187861_101806503	3300018020	Peatland	MSEKGQPRKSMFSVPNMEELRLLYDSDTPVLAYTFKRR
Ga0187858_100488981	3300018057	Peatland	MSEKGQPRKSMFSVPNMEELRLLYDSDTPVLAYTFKRRTVEGWTPEHSHHRGQ
Ga0187784_103055042	3300018062	Tropical Peatland	MSEKGQSRKTMFRALKNFEELRRLYDTDTPVLAYAFKRQTDEGWTPEHSHQR
Ga0187784_107280162	3300018062	Tropical Peatland	MSEKGQSRKSMFRALKNFEELRRLYDTDTPVLAYAFKRQTDEGWTPEH
Ga0193732_10213161	3300020012	Soil	MFQALKNMEELRRLYDSDTPVLAYAFRRRMVEGWTPEHSHHRGQLVALTQGLL
Ga0193724_10681832	3300020062	Soil	MSEKGQSRKSMFSALKNMEELRRLYDSDTPVLAYDFKRRMVEGWTPEH
Ga0210407_111362312	3300020579	Soil	MSEKGQVRKSMFSVQNMEELGRLYESDTPVLAYDFKRRMVEGWTPEHSHHRGQ
Ga0210403_102743141	3300020580	Soil	MSENGQSRKSMFSVQNMEELRGLYDSDTPVLAYDFKRRMVEGWTPEHSHHRGQLVA
Ga0210403_103974592	3300020580	Soil	MSEKGQSRKSMFSVQNMEELGRLYESDTPVLAYDFKRRMVEGWTPEHSH
Ga0210403_112037871	3300020580	Soil	MSEKGQVRKSMFSVQNMEELGRLYESDTPVLAYDFKRRMVEGWTP
Ga0210399_107152291	3300020581	Soil	MSEKGQLRKSMFSVQNMEELGRLYESDTPVLAYDFKRRMVEGWTPEHSHHRGQL
Ga0210395_100599834	3300020582	Soil	MSEKGQVRKSMFSVQNMEELRRLYESDTPVLAYAFKRRMVEGWTPEHS
Ga0210401_115485492	3300020583	Soil	MSEKGQSRKSMFSVQNMEELRRLYDSDTPVLAYDFKRRMVE
Ga0210401_115738782	3300020583	Soil	MSEKGQVRKSMFSVQNMEELARLYESDTPVLAYDFKRRMVEGWTPEHSHHRGQL
Ga0215015_107831572	3300021046	Soil	MSEKGQVRKSMFSVPNMEELRRLYDSDTPVLAYAFKRRMVEG
Ga0210404_102412881	3300021088	Soil	MSEKGQLRKSMFSVQNMEELGRLYESDTPVLAYAFKRRMVEGWTQEHSHHRG
Ga0210408_104577063	3300021178	Soil	MSEKGQTRKSMFSVLNMEELRRLYDSDAPVLAYEFKRRMVEG
Ga0210396_113239722	3300021180	Soil	MSEKGQVRKSMFSVQNMEELRRLYDSDTPVLAYDFKRRMVEGWTPEHSHHRGQ
Ga0210388_114358281	3300021181	Soil	MSEKGQVRKSMFSVQNMEELGRLYESDTPVLAYDFKRRMVEG
Ga0210388_114788971	3300021181	Soil	MSEKGQSRKSMFLALKNVDELRRLYESDTPVLAYGFKRRMVEGWTPEHSHHRGQ
Ga0210385_114827491	3300021402	Soil	MSEKGQSRKSMFSVQNMEELGRLYESDTPVLAYDFKRRMVEGWTPEHSHHRG
Ga0210397_111760622	3300021403	Soil	MSEKGQARKSMFSVPNMEELARFYESDTPVLAYDFKRRMVEGWT
Ga0210389_109056232	3300021404	Soil	MSEKGQSRKSMFVVKNMEELRRLYDSDMPVLAYAFKR
Ga0210386_112573831	3300021406	Soil	MSEKGQSRKSMFVVKNMEELRRLYDSDMPVLAYAFKRRTVEGWTPEHSHPRGP
Ga0210394_113581811	3300021420	Soil	MSEKGQTRKSMFSVQNMEELRGLYDSDTPVLAYDFKRRMVEGWTPE
Ga0210384_112848781	3300021432	Soil	MSEKGQTQKSMFSVQNMEELRGLYDSDTPVLAYDFKRRMVEGWTPEHS
Ga0210392_112228872	3300021475	Soil	MSEKGQSRKSMFVAKNMEELRRLYDSDTPVLAYAFKRQTVEGWTPEHSH
Ga0187846_100249302	3300021476	Biofilm	MSEKGQSRKSMFVALKNMEEQRRLYDSDTPVLAYAFKRRTVEGWTNSYL
Ga0187846_104071942	3300021476	Biofilm	MSEKGQSRKSMFVALKNMEELRRLYDTDTPVLAYAFKRQTDEGWTPEHSH
Ga0210398_115980161	3300021477	Soil	MSEKGQAQKSMFSVQNMEELRGLYDSDTPVLAYDFKRRMVEG
Ga0210410_107515141	3300021479	Soil	MSEKGQAQKSMFSVQNMEELRGLYDSDTPVLAYDFKRRMVEGWTPE
Ga0126371_101458222	3300021560	Tropical Forest Soil	MSEKGQPRKSMFRALKNFEELRRLYDTDTPVLAYAFKRQTDAFAFPRSQ
Ga0247679_10051893	3300024251	Soil	MSEKGQVRKSMFSVQNMEELGRLYESDTPVLAYDFKRRMVEGWTPEHSHH
Ga0179589_100129063	3300024288	Vadose Zone Soil	MSEKGQFRKSMFSVQNMEELGRLYESDTPVLAYDFKRRM
Ga0137417_10992281	3300024330	Vadose Zone Soil	MSEKGQSRKSMFVALKNMEELRRLYDSDTPVLAYAFKRRTVEGWTDARAQPPAR
Ga0207699_102477563	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MSEKGQPRKSMFSAPNMEELRRLYDSDTPALAYTF
Ga0207699_106963501	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MSEKGQIRKSMFSVQNMEEMGRLYESDTPVLAYDFKRRMVEGW
Ga0207663_104569722	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MSEKGQSRKSMFSVQNMEELRRLYESDTPVLAYDFKRRMVEGWT
Ga0207644_114534201	3300025931	Switchgrass Rhizosphere	MSEKGQSRKSMFGAPKDAEELRNLYDSNIPVLPFGF
Ga0207651_117576342	3300025960	Switchgrass Rhizosphere	MSEKGQSRKSMFGAPKDAEELRNLYDSNIPVLPFGFKRRTVE
Ga0257154_10435512	3300026467	Soil	MSEKGQSRKSMFVAKNMEELRRLYDSDTPVLAYAFKRRTVEGWTPEHS
Ga0208603_10460031	3300027109	Forest Soil	MSEKGQSRKAMFLALKNVDELRRLYESDTPVLAYGFKRRMVEGWTPEHSHHR
Ga0209008_11315582	3300027545	Forest Soil	MSEKGQAQKSMFAVKNMEELRRLYQSDTPVLAYDFKRRMVEGWTPEHSHHRGQLV
Ga0209330_11574591	3300027619	Forest Soil	MSEKGQSRKSMFSVQNMEELRRLYDSDTPVLAYDFKRRMVEGWTPEHSHHRGQLVAL
Ga0209799_10918162	3300027654	Tropical Forest Soil	MSEKGQPRKSMFQALRNMEELRRLYDSDTPVLAYAFKRRTVEGWTPEHSHLRGQLV
Ga0209009_11953112	3300027667	Forest Soil	MSEKGQSRKSMFSAPNMEELRLLYDSDTPVLAYTFKRRTVEGW
Ga0209530_10610182	3300027692	Forest Soil	MFSVQNMEELRRLYESDTPALAYDFKRRMVEGWTPEHSHHRGQLV
Ga0209060_105538142	3300027826	Surface Soil	MSEKGQPRKSMFVVKNMEELRLLYDSDTPVLAYTFKRRTVEG
Ga0209274_102327112	3300027853	Soil	MSEKGQFRKSMFSVQNMEELGRLYESDTPVLAYDFKRRMVEGWTPEHSHH
Ga0209274_103156431	3300027853	Soil	MSEKGQSRKSMFVVKNMEELRRLYDSDTPVLAFKRRTVEGWTPEHSHPR
Ga0209283_101716332	3300027875	Vadose Zone Soil	MSEKGQFRKSMFSVQNMEELGRLYESDTPVLAYDFKRRMVEGWTPEHS
Ga0209169_104038891	3300027879	Soil	MSEKGQVRKSMFSVQNMEELSRLYESDTPVLAYDF
Ga0209275_100389785	3300027884	Soil	MSEKGQVRKSMFSVQNMEELGRLYESDTPVLAYDFKRRM
Ga0222749_100965551	3300029636	Soil	MSEKGQSRKFMFLALKNVDELRRLYESDTPVLAYGFKRRMVEGWTPEHSHHRGQL
Ga0310686_1123648371	3300031708	Soil	MAEKGQSRKSMFVALKNMEELRRLYDSDTPVLAYDFKR
Ga0310686_1136064901	3300031708	Soil	MSEKGQSRKSMFAVQNMEELGRLYESDTPVLAYDFKRRMVEGWTPEHSHHRGQ
Ga0307474_102451841	3300031718	Hardwood Forest Soil	MSEKGQVRKSMFSVQNMEELRGLYESDTPVLAYDFKRRMVEGWTPEHSHHRGQLVAL
Ga0307474_111907251	3300031718	Hardwood Forest Soil	MSEKGQSRKSMFSAPNMEELRRLYDSDTPVLAYTFK
Ga0307469_103634411	3300031720	Hardwood Forest Soil	MSEKGQVRKSMFSVQNMEELRRLYESDTPVLAYDF
Ga0307477_105050452	3300031753	Hardwood Forest Soil	MSEKGQVRKSMFSVENMEELRRLYESDTPVLAYDF
Ga0310912_109847491	3300031941	Soil	MSEKGQSRKSMFAVKNMEELRRLYDSDTPVLAYAFKRRTVE
Ga0310909_109173002	3300031947	Soil	MSEKGQSRKSMFGALKNMEELRRLYDSDTPVLAYAFKRRTVEGWTPEHSHPRGQLV
Ga0306926_117723242	3300031954	Soil	MSEKGQPRKSMFRALKNFEELRRLYDTDTPVLAYAFKRQTDEGWTP
Ga0318533_112461681	3300032059	Soil	MSEKGQSRKSMFVAQNMEELRRLYDSDTPVLAYAFKRRTV
Ga0307471_1034286431	3300032180	Hardwood Forest Soil	MWLFMSEKGQPRKSTFSVPWNVEELRRLAESDVPVLAFAFERSGAEAWAPEHSHARGQLF
Ga0335085_107451273	3300032770	Soil	MSEKGQPGKSMFRAPNMEELRLLYDSDTPVLAYTFKRRTVEGWTP
Ga0310914_106947031	3300033289	Soil	MSEKGQSRKSMFVVKNMEELRRLYDSDTPVLAYAFKRRTVEGWTPEHSHPRGQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F059247

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences