Metagenome / Metatranscriptome Family F059229

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F059229
Family Type	Metagenome / Metatranscriptome
Number of Sequences	134
Average Sequence Length	54 residues
Representative Sequence	NFTGQAVTHKDGRTHIVLGRATPSSRDRGSVTFSIVTDDAKIVFNTSYHFGT
Number of Associated Samples	101
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	98.51 %
% of genes from short scaffolds (< 2000 bps)	89.55 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (80.597 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (14.179 % of family members)
Environment Ontology (ENVO)	Unclassified (29.851 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (55.970 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 55.77% Coil/Unstructured: 44.23%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF02518	HATPase_c	5.22
PF05239	PRC	2.24
PF13884	Peptidase_S74	2.24
PF12850	Metallophos_2	2.24
PF12200	DUF3597	1.49
PF02517	Rce1-like	1.49
PF16798	DUF5069	0.75
PF00710	Asparaginase	0.75
PF13185	GAF_2	0.75
PF13557	Phenol_MetA_deg	0.75
PF13188	PAS_8	0.75
PF00202	Aminotran_3	0.75
PF06739	SBBP	0.75
PF11306	DUF3108	0.75
PF02403	Seryl_tRNA_N	0.75
PF01594	AI-2E_transport	0.75
PF01590	GAF	0.75
PF00528	BPD_transp_1	0.75
PF13415	Kelch_3	0.75
PF02036	SCP2	0.75
PF00903	Glyoxalase	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG0252	L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D	Translation, ribosomal structure and biogenesis [J]	1.49
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	1.49
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	1.49
COG0172	Seryl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.75
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	80.60 %
Unclassified	root	N/A	19.40 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	80.60 %
Unclassified	root	N/A	19.40 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	80.60 %
Unclassified	root	N/A	19.40 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	28.36 %
Unclassified	root	N/A	19.40 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.24 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.24 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.49 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	28.36 %
Unclassified	root	N/A	19.40 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.24 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.49 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.75 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.75 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.40 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	11.94 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	4.48 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.24 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.49 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	0.75 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.75 %
Ardenticatenia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ardenticatenia	0.75 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.40 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	11.94 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	3.73 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.24 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.49 %
Ardenticatenales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ardenticatenia → Ardenticatenales	0.75 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.75 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.75 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.75 %
unclassified Spartobacteria	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.40 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	11.94 %
unclassified Chthoniobacterales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales	2.24 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.24 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	1.49 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.49 %
Spartobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria → Spartobacteria bacterium	0.75 %
unclassified Ardenticatenales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ardenticatenia → Ardenticatenales → unclassified Ardenticatenales	0.75 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	0.75 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.75 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.40 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	11.94 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	2.24 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.24 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1.49 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.49 %
Ardenticatenales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ardenticatenia → Ardenticatenales → unclassified Ardenticatenales → Ardenticatenales bacterium	0.75 %
Pedosphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	0.75 %
Spartobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria → Spartobacteria bacterium	0.75 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.75 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.40 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	11.94 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	2.24 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.24 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1.49 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.49 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	0.75 %
Ardenticatenales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ardenticatenia → Ardenticatenales → unclassified Ardenticatenales → Ardenticatenales bacterium	0.75 %
Spartobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria → Spartobacteria bacterium	0.75 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.75 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2065487018\|GPINP_F5MS3JC02H8P1X	Not Available	525	Open in IMG/M
2088090014\|GPIPI_17185485	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1066	Open in IMG/M
2170459009\|GA8DASG02IV8WL	Not Available	555	Open in IMG/M
2170459010\|GIO7OMY01DD8JM	All Organisms → cellular organisms → Bacteria → Proteobacteria	519	Open in IMG/M
2170459013\|GO6OHWN02G48OQ	Not Available	533	Open in IMG/M
3300002128\|JGI24036J26619_10011056	All Organisms → cellular organisms → Bacteria	1623	Open in IMG/M
3300005288\|Ga0065714_10457993	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300005290\|Ga0065712_10011739	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2398	Open in IMG/M
3300005290\|Ga0065712_10286044	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300005293\|Ga0065715_10090680	All Organisms → cellular organisms → Bacteria	6626	Open in IMG/M
3300005294\|Ga0065705_10049228	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300005330\|Ga0070690_100497350	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300005340\|Ga0070689_100741169	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300005340\|Ga0070689_100748148	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	857	Open in IMG/M
3300005355\|Ga0070671_101791081	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300005355\|Ga0070671_102105618	All Organisms → cellular organisms → Bacteria → Proteobacteria	503	Open in IMG/M
3300005365\|Ga0070688_100804146	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300005365\|Ga0070688_101002279	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300005434\|Ga0070709_10449593	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	970	Open in IMG/M
3300005436\|Ga0070713_102343658	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300005437\|Ga0070710_10114940	All Organisms → cellular organisms → Bacteria	1621	Open in IMG/M
3300005437\|Ga0070710_10858065	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300005439\|Ga0070711_100048029	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2916	Open in IMG/M
3300005457\|Ga0070662_100385648	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1154	Open in IMG/M
3300005536\|Ga0070697_101274578	Not Available	655	Open in IMG/M
3300005546\|Ga0070696_101766319	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300005547\|Ga0070693_101402626	Not Available	543	Open in IMG/M
3300005554\|Ga0066661_10480974	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	754	Open in IMG/M
3300005614\|Ga0068856_102061012	Not Available	580	Open in IMG/M
3300006028\|Ga0070717_10250260	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1565	Open in IMG/M
3300006028\|Ga0070717_10921503	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300006046\|Ga0066652_100047310	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3215	Open in IMG/M
3300006175\|Ga0070712_100112098	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2037	Open in IMG/M
3300006175\|Ga0070712_100430893	All Organisms → cellular organisms → Bacteria → Proteobacteria	1094	Open in IMG/M
3300006175\|Ga0070712_101371964	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300006175\|Ga0070712_101857169	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	528	Open in IMG/M
3300006852\|Ga0075433_10408662	All Organisms → cellular organisms → Bacteria	1197	Open in IMG/M
3300006854\|Ga0075425_102837139	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300006904\|Ga0075424_100968113	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300009156\|Ga0111538_12032792	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	722	Open in IMG/M
3300010401\|Ga0134121_11895854	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	625	Open in IMG/M
3300010403\|Ga0134123_12845280	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300010403\|Ga0134123_13307195	Not Available	520	Open in IMG/M
3300012181\|Ga0153922_1174016	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300012202\|Ga0137363_11467431	Not Available	573	Open in IMG/M
3300012513\|Ga0157326_1014255	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	924	Open in IMG/M
3300012582\|Ga0137358_10463179	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300012897\|Ga0157285_10034264	All Organisms → cellular organisms → Bacteria	1162	Open in IMG/M
3300012915\|Ga0157302_10193150	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300012929\|Ga0137404_10960876	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300012957\|Ga0164303_10038985	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2021	Open in IMG/M
3300012960\|Ga0164301_10168574	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1361	Open in IMG/M
3300012989\|Ga0164305_11719777	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	564	Open in IMG/M
3300013296\|Ga0157374_11385022	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300013296\|Ga0157374_11950584	Not Available	613	Open in IMG/M
3300013306\|Ga0163162_11439354	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300013307\|Ga0157372_12575476	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300013308\|Ga0157375_10918509	All Organisms → cellular organisms → Bacteria	1018	Open in IMG/M
3300013308\|Ga0157375_11296649	Not Available	856	Open in IMG/M
3300015264\|Ga0137403_10568458	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300015264\|Ga0137403_11039212	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	666	Open in IMG/M
3300015371\|Ga0132258_10214753	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	4676	Open in IMG/M
3300015371\|Ga0132258_11271114	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	1860	Open in IMG/M
3300015371\|Ga0132258_11710744	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1586	Open in IMG/M
3300015371\|Ga0132258_13842933	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1022	Open in IMG/M
3300015372\|Ga0132256_100666577	All Organisms → cellular organisms → Bacteria	1156	Open in IMG/M
3300015372\|Ga0132256_102518973	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300015373\|Ga0132257_102623397	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300015373\|Ga0132257_103178226	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300015373\|Ga0132257_103829653	Not Available	547	Open in IMG/M
3300015374\|Ga0132255_100556766	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1691	Open in IMG/M
3300015374\|Ga0132255_101172547	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1156	Open in IMG/M
3300015374\|Ga0132255_101839835	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300015374\|Ga0132255_103325788	Not Available	685	Open in IMG/M
3300015374\|Ga0132255_105880497	Not Available	519	Open in IMG/M
3300018000\|Ga0184604_10366361	Not Available	514	Open in IMG/M
3300019361\|Ga0173482_10121859	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300019875\|Ga0193701_1076982	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	650	Open in IMG/M
3300019880\|Ga0193712_1086255	Not Available	683	Open in IMG/M
3300019882\|Ga0193713_1093223	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria → Spartobacteria bacterium	842	Open in IMG/M
3300020006\|Ga0193735_1145885	Not Available	619	Open in IMG/M
3300020022\|Ga0193733_1202791	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300021080\|Ga0210382_10202134	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	863	Open in IMG/M
3300021088\|Ga0210404_10494304	Not Available	691	Open in IMG/M
3300021168\|Ga0210406_10322260	All Organisms → cellular organisms → Bacteria	1252	Open in IMG/M
3300021178\|Ga0210408_10239410	All Organisms → cellular organisms → Bacteria	1445	Open in IMG/M
3300021445\|Ga0182009_10031750	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2115	Open in IMG/M
3300021478\|Ga0210402_12012642	Not Available	503	Open in IMG/M
3300022557\|Ga0212123_10493788	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	796	Open in IMG/M
3300022756\|Ga0222622_11299030	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	535	Open in IMG/M
3300022883\|Ga0247786_1103568	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	617	Open in IMG/M
3300023058\|Ga0193714_1001708	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3648	Open in IMG/M
3300023058\|Ga0193714_1006107	All Organisms → cellular organisms → Bacteria	1898	Open in IMG/M
3300023058\|Ga0193714_1010077	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1444	Open in IMG/M
3300023058\|Ga0193714_1030944	Not Available	785	Open in IMG/M
3300024279\|Ga0247692_1016204	All Organisms → cellular organisms → Bacteria	1138	Open in IMG/M
3300025907\|Ga0207645_10543689	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300025916\|Ga0207663_10947398	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300025923\|Ga0207681_11329373	Not Available	603	Open in IMG/M
3300025926\|Ga0207659_10253758	All Organisms → cellular organisms → Bacteria	1428	Open in IMG/M
3300025930\|Ga0207701_10095987	All Organisms → cellular organisms → Bacteria	2663	Open in IMG/M
3300025931\|Ga0207644_10857655	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300025936\|Ga0207670_10178573	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1597	Open in IMG/M
3300025938\|Ga0207704_10721921	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300026023\|Ga0207677_11171349	Not Available	703	Open in IMG/M
3300026078\|Ga0207702_11030926	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300026078\|Ga0207702_11688292	Not Available	626	Open in IMG/M
3300026089\|Ga0207648_10483581	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1131	Open in IMG/M
3300026822\|Ga0207498_104224	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300027417\|Ga0207543_101018	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300027821\|Ga0209811_10027587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ardenticatenia → Ardenticatenales → unclassified Ardenticatenales → Ardenticatenales bacterium	1880	Open in IMG/M
3300027821\|Ga0209811_10155483	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300028379\|Ga0268266_10035202	All Organisms → cellular organisms → Bacteria	4259	Open in IMG/M
3300028380\|Ga0268265_10396294	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1275	Open in IMG/M
3300028784\|Ga0307282_10300411	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300030916\|Ga0075386_10102700	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300030966\|Ga0075383_10027262	All Organisms → cellular organisms → Bacteria	1175	Open in IMG/M
3300031015\|Ga0138298_1112067	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	626	Open in IMG/M
3300031057\|Ga0170834_106773658	Not Available	582	Open in IMG/M
3300031057\|Ga0170834_110140972	Not Available	1057	Open in IMG/M
3300031231\|Ga0170824_121904297	All Organisms → cellular organisms → Bacteria	1553	Open in IMG/M
3300031231\|Ga0170824_128803696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	807	Open in IMG/M
3300031469\|Ga0170819_10275431	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	790	Open in IMG/M
3300031720\|Ga0307469_11971014	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300031740\|Ga0307468_101810358	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300032179\|Ga0310889_10606734	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300032180\|Ga0307471_101192239	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	926	Open in IMG/M
3300032180\|Ga0307471_103719275	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	540	Open in IMG/M
3300032205\|Ga0307472_102414391	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300033412\|Ga0310810_10083856	All Organisms → cellular organisms → Bacteria	3833	Open in IMG/M
3300033412\|Ga0310810_10814014	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	841	Open in IMG/M
3300033412\|Ga0310810_10939921	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	66.42%
Host-Associated	Host-Associated	33.58%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	63.43%
Plants	Host-Associated → Plants	32.84%
Aquatic	Environmental → Aquatic	2.99%
Fungi	Host-Associated → Fungi	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.43%
Rhizoplane	Host-Associated → Plants → Rhizoplane	18.66%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.18%
Sediment	Environmental → Aquatic → Sediment	1.49%
Freshwater	Environmental → Aquatic → Freshwater	0.75%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.75%
Mycelium	Host-Associated → Fungi → Mycelium	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.01%
Loam	Environmental → Terrestrial → Soil → Loam	16.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	11.94%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.46%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.49%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.75%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.75%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	16.42%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.43%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	11.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.46%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.72%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.24%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.49%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.75%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.75%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.75%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.18%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	8.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.97%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	4.48%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.73%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.73%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	2.99%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.99%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	2.24%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.24%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.24%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.49%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.49%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.49%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.49%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.75%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.75%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.75%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.75%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.75%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2065487018	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2170459009	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cm	Environmental	Open in IMG/M
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
2170459013	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis soil at the rocks surface 0-21cm	Environmental	Open in IMG/M
3300002128	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5	Environmental	Open in IMG/M
3300005288	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012181	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ006 MetaG	Host-Associated	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012513	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510	Host-Associated	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300019880	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a1	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300022883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4	Environmental	Open in IMG/M
3300023058	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m1	Environmental	Open in IMG/M
3300024279	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK33	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026822	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A1-12 (SPAdes)	Environmental	Open in IMG/M
3300027417	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G07A1-10 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030966	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB4 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031015	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A9_MS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPINP_03549460	2065487018	Soil	GKAVTHKDGRTHIVLGRATPSSGDRGGVTFSIITDDAKIVFNTSYHFGT
GPIPI_00810800	2088090014	Soil	TGQAVTHKDGRTHIVLGRATPSSRDRGSVTFSIVTDDARIVFNTSYHFPALRP
F47_02885370	2170459009	Grass Soil	AINFTGQAVTHKDGRTHIVLGRATPSSRDRGSVTFSIVTDDARIVFNTSYHFPAPRP
F62_09140500	2170459010	Grass Soil	KDGRTHIVLGRATPSSGDRGRVTFSIVTDDARIVFNTSYHFPAPRP
N57_01658440	2170459013	Grass Soil	QAVTHKDGRTHIVLGRATPSSGNRGGVTFSIITDDAKIVFNTSYHFGTQPGT
JGI24036J26619_100110563	3300002128	Corn, Switchgrass And Miscanthus Rhizosphere	GTAINFTGQAVTHKDGRTHIVLGRATPSSSDRGSVTFSIVTDDARIVFNTSYHFPAPPL*
Ga0065714_104579931	3300005288	Miscanthus Rhizosphere	AVTHKDGRTHIVLGRATPSSRDRGSVTFSIVTDDARIVFNTSYHFGT*
Ga0065712_100117391	3300005290	Miscanthus Rhizosphere	HKDGRTHIVLGRATPSSGNRGGVTFSIITDDAKIVFNTSYHFGTQPGT*
Ga0065712_102860441	3300005290	Miscanthus Rhizosphere	KAVTHKDGRTHIVLGRATPSSGNRGGVTFSIITDDAKIVFNTSYHFGTQPGT*
Ga0065715_100906801	3300005293	Miscanthus Rhizosphere	KLQAGTAINFTGQAVTHKDGRTHIVLGRATPSSRDRGSVTFSIVTDDARIVFNTSYHFGT
Ga0065705_100492281	3300005294	Switchgrass Rhizosphere	AINFTGRAVTHKDGRTHIVLGRATPSSRDRGSVTFSIVTDEARIVFNTSYHFGHSR*
Ga0070690_1004973502	3300005330	Switchgrass Rhizosphere	AVTYKDGRTHIVLGRATPSSRDRGRVTFSIVTDDARIVFNTSYHFPALRP*
Ga0070689_1007411692	3300005340	Switchgrass Rhizosphere	INFTGQAVTHKDGRTHIVLGRATPSSRDRGSVTFSIVTDDARIVFNTSYHFPAPRP*
Ga0070689_1007481481	3300005340	Switchgrass Rhizosphere	TAINFTGQAVTHKDGRTHIVLGRATPSSGNRGGVTFSIITDDAKIVFNTSYHFGTQPGT*
Ga0070671_1017910811	3300005355	Switchgrass Rhizosphere	AGTAINFTGQAVTHKDGRTHIVLGRATPSSRDRGSVTFSIVTDDARIVFNTSYHFPAPRP
Ga0070671_1021056181	3300005355	Switchgrass Rhizosphere	KDGRTHIVLGRATPSSRDRGSVTFSIVTDDARLVFNTSYHFPAPRP*
Ga0070688_1008041462	3300005365	Switchgrass Rhizosphere	GQAVTYKDGRTHIVLGRATPSSRDRGRVTFSIVTDDARIVFNTSYHFPALRP*
Ga0070688_1010022791	3300005365	Switchgrass Rhizosphere	RKLQAGTAINFTGQAVTHKDGRTHIVLGRATPSSRDRGSVTFSIVTDDAKIVFNTSYHFGT*
Ga0070709_104495932	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	GTAINFTGQAVTHKDGRTHIVLGRATPSSRDRGSVTFSIVTDDARIVFNTSYHFGT*
Ga0070713_1023436582	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	DGRTHIVLGRATPSSRDRGSVTFSIVTDDARIVFNTSYHFGT*
Ga0070710_101149401	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	THKDGRTHIVLGRATPSSRDRGSVTFSIVTDDARIVFNTSYHFGT*
Ga0070710_108580651	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	HIVLGRATPSSRDRGSVTFSIVTDDARIVFNTSYHFPAPPP*
Ga0070711_1000480295	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	DAVRKLQAGTAINFTGQAVTHKDGRTHIVLGRATPSSGDRGSVTFSIVTDDARIVFNTSYHFGT*
Ga0070662_1003856482	3300005457	Corn Rhizosphere	NFTGQAVTHKDGRTHTVLGRATPSSRDHGSVTFSIVTDDAKIVFNTSYHFPAPRP*
Ga0070699_1021877282	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	DGRTHIVLGRATPSSGDGGSVTFSIITDDGKMVFKTSYHFET*
Ga0070697_1012745781	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	FTGKAVTHKDGRTHIVLGRATPSSGDCGGVTFSIITDDAKIVFNTSYHFGTQPGT*
Ga0070696_1017663192	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	INFTGKAVTHKDGRIHVVLGRATPSSADRGNVTFSIITDDDGKLIFNTSYHFET*
Ga0070693_1014026262	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	ATDQDGRIHTVLGRATPSSPDKGSVTFSIITDDVKMVFSTFYHFET*
Ga0066661_104809742	3300005554	Soil	QAGTAINFTGQAVTHKDGRTHIVLGGATPSSHERGSVTFSIVTDDATIVFNTSYYFGHSR
Ga0068856_1020610123	3300005614	Corn Rhizosphere	AINFTGKAATDQDGRIHTVLGRATPSSPDKGSVTFSIITDDVKMVFSTLYHFET*
Ga0070717_102502601	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	HKDGRTHIVLGRATPSSRDRGSVTFSIVTDDARIVFNTSYHFGT*
Ga0070717_109215032	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	FTGQAVTHKDGRTHIVLGRATPSSGDRGSVTFSIITDDAKIVFNTSYHFGI*
Ga0066652_1000473101	3300006046	Soil	TGQAVTHKDGRTHIVLGRATPSSCDRGGVTFSIVTDDARIVFNTSYHFPASSP*
Ga0070712_1001120983	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	GTAINFTGQAVTHKDGRTHVVLGRATPSSRDRGSVTFSIETDDAKVVFNTSYHFGT*
Ga0070712_1004308931	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	KDGRTHIVLGRATPSSGDRGSVTFSIVTDDARIVFNTSYHFPAPRP*
Ga0070712_1013719642	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	GTAINFTGQAVTHKDGRTHVVLGRATPSSRDRGSVTFSIVTDDAKIVFNTSYHFGT*
Ga0070712_1018571691	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	KDGRTHIVLGRVTPSSVDRGSVTFSIITDDGKMVFNTSYHFEI*
Ga0075433_104086621	3300006852	Populus Rhizosphere	NFTGQAVTHKDGRTHIVLGRATPSSGDRGSVTFSIVTDDARIVFNTSYHFGT*
Ga0075425_1028371392	3300006854	Populus Rhizosphere	QAVTHKDGRTHIVLGRATPSSGDRGSVTFSIITDDAKIVFNTFYHFGT*
Ga0075424_1009681132	3300006904	Populus Rhizosphere	NFTGQAVTHKDGRTHIVLGRATPSSRDRGSVTFSIVTDDARIVFNTSYHFGT*
Ga0111538_120327921	3300009156	Populus Rhizosphere	NFTGQAVTHKDGRTHIVLGRATPSSRDRGSVTFSIVTDDAKIVFNTSYHFPAPRP*
Ga0134125_129993532	3300010371	Terrestrial Soil	AVTRGDGKIHVVLGKATPLSRDRGSVTFSIITENGKMVFNTSYHFETKAKTAKQLD*
Ga0134121_118958541	3300010401	Terrestrial Soil	KAVTRKDGKIHVVLGKATPSSGDRGSVTFSIITENGKMVFNTSYHFDTKPKH*
Ga0134123_128452801	3300010403	Terrestrial Soil	GTAINFTGQAVTHKDGRTHIVLGRATPSSCDRGSVTFSIVTDDARIVFNTSYHFPAPPP*
Ga0134123_133071952	3300010403	Terrestrial Soil	AINFTGQAVTHKDGRTHIVLGRATPSSRDHGSVTFSIVTDDAKIVFNTSYHFPAPRP*
Ga0153922_11740161	3300012181	Attine Ant Fungus Gardens	INFTGKAVTHKDGRTHIVLGRATPSSGDRGSVTFSITTDDAKIVFNASYHFGT*
Ga0137363_114674311	3300012202	Vadose Zone Soil	LQAGTAINFTGQAVTHKDGRTHIVLGRTTPSSPDRGSVTFSIVTDDARIVFNTSYHFPAPRP*
Ga0157326_10142551	3300012513	Arabidopsis Rhizosphere	QAGTAINFTGQAFTHKDGRTHIVLGRATPSSCDRGSVTFSIVTDDAKIVFNTSYYFPASRP*
Ga0137358_104631791	3300012582	Vadose Zone Soil	DGRTHTVLGRATPSSGDRGSVTFSIIADNGKMVFHTSYHFEI*
Ga0157285_100342642	3300012897	Soil	SDDAVRKLQAGTAINFTGQAVTHKDGRTHIVLGRATPSSRDRGSVTFSIVTDDARIVFNTSYHFGT*
Ga0157302_101931501	3300012915	Soil	VTHKDGRTHIVLGRATPSSRDRGSVTFSIVTDDARIVFNTSYHFGT*
Ga0137404_109608762	3300012929	Vadose Zone Soil	RTHTVLGRATPSSGDRGSVTFSIIADNGKMVFHTSYHFEI*
Ga0164303_100389851	3300012957	Soil	TAINFTGQAVTHKDGRTHVVLGRATPSSRDRGSVTFSIVTDDAKIVFNTSYHFGT*
Ga0164301_101685744	3300012960	Soil	AVRKLQAGTAINFTGQAVTHKDGRTHIVLGRATPSSRDRGSVTFSIVTDDARIVFNTSYHFGT*
Ga0164305_117197772	3300012989	Soil	AINFTGKAVTHKDGRTHIVLGRATPSSGNRGGVTFSIVTDDAKIVFNTSYHFGKQPGT*
Ga0157374_113850221	3300013296	Miscanthus Rhizosphere	THKDGRTHIVLGRATPSSLDRGSVTFSIVTDDAKIVFNTSYHFPAPPP*
Ga0157374_119505841	3300013296	Miscanthus Rhizosphere	TAINFTGQAVTHKDGRTHIVLGRATPSSGDRGSVTFSIVTDDARIVFNTSYHFGT*
Ga0163162_114393542	3300013306	Switchgrass Rhizosphere	VTHKDGRTHIVLGRATPSSRDRGSVTFSIVTDNARIVFNTSYHFGT*
Ga0157372_125754761	3300013307	Corn Rhizosphere	INFTGQAVTHKDGRTHIVLGKATPSSRDRGRVTFSIVTDDARIVFNTSYHFPALRP*
Ga0157375_109185091	3300013308	Miscanthus Rhizosphere	TAINFTGQAVTHKDGRTHIVLGRATPSSSDRGSVTFSIVTDDARIVFNTSYHFPAPPL*
Ga0157375_112966493	3300013308	Miscanthus Rhizosphere	TAINFTGKAATDQDGRIHTVLGRATPSSPDKGSVTFSIITDDVKLVFSTFYHFET*
Ga0137403_105684582	3300015264	Vadose Zone Soil	HKDGRTHIVLGRATPSSGDRGSVTFSIITDNGKMVFHTSYHFEI*
Ga0137403_110392121	3300015264	Vadose Zone Soil	NFTGKAVTHSDGRTHIVLGRVTPSSADRGSVTFSIITDDGKMVFKTSYHFET*
Ga0132258_102147537	3300015371	Arabidopsis Rhizosphere	FTGKAVTHKDGRTHIVLGRATPSSGNRGGVTFSIVTDDAKIVFNTSYHFGTKPGT*
Ga0132258_112711141	3300015371	Arabidopsis Rhizosphere	GNDEDGRTHIVLCRVPPASADRGSVTFSIITDDGKMVFKTSYHFEG*
Ga0132258_117107443	3300015371	Arabidopsis Rhizosphere	FTGKAVTHKDGRTHIVLGRATPSSGNRGGVTFSIITDDAKIVFNTSYHFGTQPGT*
Ga0132258_138429331	3300015371	Arabidopsis Rhizosphere	TAINFTGQAVTHKDGRTHIVLGRATPSSRDRGSVTFSIVTDEARIVFNTSYHFPAPRP*
Ga0132256_1006665771	3300015372	Arabidopsis Rhizosphere	LQAGTAINFTGQAVTHKDGRTHIVLGRATPSSLDRGSVTFSIVTDDAKIVFNTSYHFPAPRP*
Ga0132256_1025189731	3300015372	Arabidopsis Rhizosphere	LQAGTAINFTGQAVTHKDGRTHIVLGRATPSSRDRGSVTFSIVTDDARIVFNTSYHFPAPRP*
Ga0132257_1026233971	3300015373	Arabidopsis Rhizosphere	KDGRTHIVLGRATPSSRDRGSVTFSIVTDDARIVFNTSYHFGT*
Ga0132257_1031782261	3300015373	Arabidopsis Rhizosphere	GIAINFTGQAVTHKDGRTHIVLGRATPSSRDRGSVTFSIVTDDARIVFNTSYHFGT*
Ga0132257_1038296531	3300015373	Arabidopsis Rhizosphere	TAINFTGKAVTHKDGRTHIVLGRATPSSGNRGGVTFSIITDDAKIVFNTSYHFGTQPGT*
Ga0132255_1005567662	3300015374	Arabidopsis Rhizosphere	GTAINFTGKAVTHKDGRTHIVLGRETPSSGNRGGVTFSIITDDAKIVFNTSYHFGTQPGT
Ga0132255_1011725471	3300015374	Arabidopsis Rhizosphere	DGRTHIVLGRATPSSCDRGSVTFSIVTDDARIVFNTSYHFPEPRP*
Ga0132255_1018398352	3300015374	Arabidopsis Rhizosphere	RKLQAGTAINFTGQAVTHKDGRTHIVLGRATPSSLDRGSVTFSIVTDDAKIVFNTSYHFPAPRP*
Ga0132255_1033257881	3300015374	Arabidopsis Rhizosphere	QAGTAINFTGQAVTHKDGRTHIVLGRATPSSRDRGSVTFSIVTDDAKIVFNTSYHLPAPLP*
Ga0132255_1058804972	3300015374	Arabidopsis Rhizosphere	FTGQAVTHKDGRTHIVLGRATPSSRDRGSVTFSIVTDDARIVFNTSYHFGT*
Ga0184604_103663611	3300018000	Groundwater Sediment	GTAINFTGKAVTHKDGRTHIVLGRATPSSGNRGGVTFSIITDDAKIVFNTSYHFGTQPGT
Ga0173482_101218592	3300019361	Soil	TGQAVTHKDGRTHIVLGRATPSSRDRGSVTFPIVTDDARIVFNTSYHFGT
Ga0193701_10769822	3300019875	Soil	AINFTGKAVTHKDGRTHIVLGRATPSSGNRGGVTFSIITDDAKIVFNTSYHFGRQPGT
Ga0193712_10862552	3300019880	Soil	DGRTHIVLGRATPSSGNRGGVTFSIITDDAKIVFNTSYHFGTQPGT
Ga0193713_10932231	3300019882	Soil	VTYKDGRTHVVLGRAKPSSGDRGSVTFSIITDDVKLVFNTSYHFEAKPKQ
Ga0193735_11458851	3300020006	Soil	KAVTHKDGRTHIVLGRATPSSGNRGGVTFSIITDNAKIVFNTSYHFATQPGT
Ga0193733_12027911	3300020022	Soil	AGTAINFTGKAVTHKDGRIHVVLGKATPSSGNRGSVTFSIITDEDGKLIFNTSYHFET
Ga0210382_102021342	3300021080	Groundwater Sediment	QAGTAINFTGKTVTRKDDRTHIVLGRATPSSGDRGSVTFSIITDDGKMVFSTSYHFET
Ga0210404_104943042	3300021088	Soil	PINFTGKAITHKDGRTHIVLGRATPSSGDRGIVTFSIITDDAKIVFNTSYHFGT
Ga0210406_103222604	3300021168	Soil	VTYEDGRTHIVLGRVTPSSADRGSVTFSIITDDGKIVFKTSYHFES
Ga0210408_102394102	3300021178	Soil	VRKLQAGTAINFTGQAVTHKDGRTHIVLGRATPSSRDRGSVTFSIVTDDAKIVFNTSYHFGT
Ga0182009_100317503	3300021445	Soil	RKLQTGTAINFTGKAVTHKDGRTHIVLGRATPSSGSRGGVTFSIITDEAKIVFNTFYHFGTQPGT
Ga0210402_120126421	3300021478	Soil	KAVTHKDGRTHIVLGRATPSSGDRGSVTFSIITDNAKIVFNTSYHFGT
Ga0212123_104937881	3300022557	Iron-Sulfur Acid Spring	NFTGNAVTHKDGRTHIVLGRATPSSGDRGSVTFSIITDDAKIVFNTSYHFRDIVAQEPRL
Ga0222622_112990301	3300022756	Groundwater Sediment	GTAINFTGKAVTHKDGRTHIVLGRATPSSGNRGGVTFSIITDDAKIVFNTSYHFGRQPGT
Ga0247786_11035681	3300022883	Soil	DGRTHIVLGRATPSSRDRGSVTFSIVTDDARIVFNTSYHFGTQPGT
Ga0193714_10017081	3300023058	Soil	AVTHKDGRTHIVLGRATPSSGNRGGVTFSIITDDAKIVFNTSYHFGRQPGT
Ga0193714_10061074	3300023058	Soil	AVTHKDGRTHIVLGRATPSSGNRGGVTFSIITDNAKIVFNTSYHFATQPGT
Ga0193714_10100772	3300023058	Soil	KDGRTHIVLGRATPSSGNRGGVTFSIITDDAKIVFNTSYHFGTQPGT
Ga0193714_10309442	3300023058	Soil	KAVTHKDGRTHIVLGRATPSSGNRGGVTFSIITDDAKIVFNTSYHFGTQPGT
Ga0247692_10162041	3300024279	Soil	DGRTHIVLGRATPSSGNRGGVTFSIITDDAKIVFNTSYHFGIQPGT
Ga0207645_105436891	3300025907	Miscanthus Rhizosphere	VTHKDGRTHIVLGRATPSSRDRGSVTFSIVTDNARIVFNTSYHFGT
Ga0207663_109473981	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	RKLQTGTAINFTGQAVTHKDGRTHIVLGRATPSSGNRGGVTFSIITDDAKIVFNTSYHFG
Ga0207681_113293731	3300025923	Switchgrass Rhizosphere	INFTGQAVTHKDGRTHIVLGRATPSSGDRGSVTFSIVTDDARIVFNTSYHFPAPRP
Ga0207659_102537581	3300025926	Miscanthus Rhizosphere	KLQAGTAINFTGQAVTHKDGRTHIVLGRATPSSSDRGSVTFSIVTDDARIVFNTSYHFPAPPL
Ga0207701_100959871	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	VTYKDGRTHIVLGRATPSSRDRGSVTFSIVTDDARIVFNTSYHFPALRP
Ga0207644_108576552	3300025931	Switchgrass Rhizosphere	NFTGQAVTHKDGRTHIVLGRATPSSRDRGSVTFSIVTDDAKIVFNTSYHFGT
Ga0207670_101785731	3300025936	Switchgrass Rhizosphere	INFTGQAVTHKDGRTHIVLGRATPSSGNRGGVTFSIITDDAKIVFNTSYHFGTQPGT
Ga0207704_107219211	3300025938	Miscanthus Rhizosphere	KLQAGTAINFTGQAVTHKDGRTHIVLGRATPSSRDRGSVTFSIVTDNARIVFNTSYHFGT
Ga0207677_111713491	3300026023	Miscanthus Rhizosphere	MNFTGQAVTHKDGRTHTVLGRATPSSRDRGSVTFSIVTDDAKIVFNTSYHFPAPRP
Ga0207702_110309261	3300026078	Corn Rhizosphere	RKLQTGTAINFTGQAVTHKDGRTHIVLGRATPSSRDRGSVTFSIVTDDARIVFNTSYHFG
Ga0207702_116882921	3300026078	Corn Rhizosphere	AINFTGKAATDQDGRIHTVLGRATPSSPDKGSVTFSIITDDVKMVFSTLYHFET
Ga0207648_104835811	3300026089	Miscanthus Rhizosphere	KLQAGTAINFTGQAVTHKDGRTHIVLGRATPSSSDRGSVTFSIVTDDARIVFNTSYHFPAPPP
Ga0207498_1042241	3300026822	Soil	TGQAVTHKDGRTHIVLGRATPSSRDRGSVTFSIVTDDARIVFNTSYHFPAPPP
Ga0207543_1010181	3300027417	Soil	HKDGRTHIVLGRATPSSSDRGSVTFSIVTDDARIVFNTSYHFPAPPP
Ga0209811_100275873	3300027821	Surface Soil	FTGQAVTHKDGRTHIVLGRATPSSRDRGSVTFFIVTDDARIVFNTSYHFGT
Ga0209811_101554831	3300027821	Surface Soil	FTGQAVTHKDGRTHIVLGRATPSSRDRGSVTFSIVTDDARIVFNTSYHFPAPGP
Ga0268266_100352026	3300028379	Switchgrass Rhizosphere	AFTGKAVTRKDGKIHVVLGKATPSSRDRGSVTFSIITENGKMIFNTSYHFKTTKTSKQ
Ga0268265_103962941	3300028380	Switchgrass Rhizosphere	TAINFTGQAVTHKDGRTHIVLGRATPSSGDRGSVTFSIVTDDARIVFNTSYHFGT
Ga0307282_103004111	3300028784	Soil	KLQTGTAINFTGKAVTHKDGRTHIVLGRATPSSGNRGGVTFSIITDDAKIVFNTSYHFGT
Ga0075386_101027001	3300030916	Soil	DGRTHIVLGRATPSSRDRGSVTFSIVTDDARIVFNTSYHFGT
Ga0075383_100272622	3300030966	Soil	KLQAGTAINFTGQAVTHKDGRTHIVLGRATPSSPDRGTVTFSIVTDDAKIVFNTSYHFGT
Ga0138298_11120672	3300031015	Soil	AINFTGQAVTHKDGRTHIVLGRATPSSRDRGSVTFSIVTDDARIVFNTSYHFPAPSP
Ga0170834_1067736581	3300031057	Forest Soil	GTAINFTGQAVTHKDGRTHIVLGRATPSSCDRGSVTFSIVTDDARIVFNTSYHFPAPRPSEQ
Ga0170834_1101409721	3300031057	Forest Soil	DAVRKLQAGTAINFTGQAVTHKDGRTHIVLGRATPSSRDRGSVTFSIVTDDARIVFNTSYHFGT
Ga0170824_1219042971	3300031231	Forest Soil	TAINFTGQAVTHKDGRTHIVLGRATPSSRDRGSVTFSIVTDDARIVFNTSYHFGT
Ga0170824_1288036961	3300031231	Forest Soil	GRTHIVLGRATPSSRDRGSVTFSIITDDARIVFNTSYHFGT
Ga0170819_102754312	3300031469	Forest Soil	FTGQAVTHKDGRTHIVLGRATPSSRDRGSVTFSIVTDDARIVFNTSYHFGT
Ga0307469_119710141	3300031720	Hardwood Forest Soil	HKDGRTHIVLGRATPSSRDRGSVTFSIVTDDAKIVFNTSYHFGK
Ga0307468_1018103582	3300031740	Hardwood Forest Soil	AGTAINFTGKAVTHKDGRTHIVLGRATPSSGDRGSVTFSIITDDAKIVFNTSYHFGT
Ga0310889_106067342	3300032179	Soil	AINFIGQAVTHKDGRTHIVLGRATPSSPDRGSVTFSIVTDDARIVFNASYHFGT
Ga0307471_1011922391	3300032180	Hardwood Forest Soil	FTGQAVTHKDGRTHIVLGRATPSSRDHGSVTFSIVTDDARIVFNTSYHFGT
Ga0307471_1037192751	3300032180	Hardwood Forest Soil	AVTHKDGRTHIVLGRATPSSGDCGGVTFSIITDDARIVFNTSYHFGTQPGT
Ga0307472_1024143912	3300032205	Hardwood Forest Soil	AVTHKDGRTHIVLGRATPSSRDRGSVTFSIVTDDARIVFNTSYHFGT
Ga0310810_100838561	3300033412	Soil	DRKLQAGTSINFTGKAVTHEDGRTHIVLGRAIPSTGDRGKVTFSIVTDDAKIVFNTSYHFGT
Ga0310810_108140141	3300033412	Soil	HKDGRTHIVLGRATPSSRDRGSVTFSIVTDDARIVFNTSYHFPAPHP
Ga0310810_109399211	3300033412	Soil	AINFTGKAVTHKDGRTHIVLGRATPSSGNRGGVTFSIITDDAKIVFNTSYHFGTQPGT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F059229

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences