Metagenome / Metatranscriptome Family F059178

Overview

Basic Information

• Family ID: F059178
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 134
• Average Sequence Length: 41 residues
• Representative Sequence: VTGIAPQRSPVVAKARELVAVARRYGYRPEELAEIIKQVS
• Number of Associated Samples: 117
• Number of Associated Scaffolds: 134

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 3.01 %
• % of genes near scaffold ends (potentially truncated): 89.55 %
• % of genes from short scaffolds (< 2000 bps): 80.60 %
• Associated GOLD sequencing projects: 110
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (58.209 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (27.612 % of family members)
• Environment Ontology (ENVO): Unclassified (30.597 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (50.746 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 42.65%
  β-sheet: 0.00%
  Coil/Unstructured: 57.35%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF00392	GntR	2.24
PF14016	DUF4232	1.49
PF00144	Beta-lactamase	1.49
PF07676	PD40	1.49
PF00753	Lactamase_B	1.49
PF10056	DUF2293	1.49
PF02367	TsaE	1.49
PF00248	Aldo_ket_red	0.75
PF13495	Phage_int_SAM_4	0.75
PF04909	Amidohydro_2	0.75
PF13751	DDE_Tnp_1_6	0.75
PF01012	ETF	0.75
PF09851	SHOCT	0.75
PF00881	Nitroreductase	0.75
PF03682	UPF0158	0.75
PF01266	DAO	0.75
PF01047	MarR	0.75
PF00589	Phage_integrase	0.75
PF01494	FAD_binding_3	0.75
PF00145	DNA_methylase	0.75
PF04024	PspC	0.75
PF13602	ADH_zinc_N_2	0.75
PF04675	DNA_ligase_A_N	0.75
PF00581	Rhodanese	0.75
PF00583	Acetyltransf_1	0.75
PF05016	ParE_toxin	0.75
PF03551	PadR	0.75

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.49
COG0802	tRNA A37 threonylcarbamoyladenosine biosynthesis protein TsaE	Translation, ribosomal structure and biogenesis [J]	1.49
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	1.49
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	1.49
COG2367	Beta-lactamase class A	Defense mechanisms [V]	1.49
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	0.75
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.75
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.75
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.75
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.75
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.75
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.75
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.75
COG2025	Electron transfer flavoprotein, alpha subunit FixB	Energy production and conversion [C]	0.75
COG2086	Electron transfer flavoprotein, alpha and beta subunits	Energy production and conversion [C]	0.75

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.21 %
All Organisms	root	All Organisms	41.79 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.21 %
cellular organisms	root	All Organisms → cellular organisms	41.79 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.21 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	41.79 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.21 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	38.81 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.75 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.21 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	36.57 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.75 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.21 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	28.36 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.75 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.75 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.21 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	21.64 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.75 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.75 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.21 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	21.64 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	0.75 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.75 %

Level 9

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.21 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	21.64 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	0.75 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.75 %

Level 10

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.21 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	21.64 %
unclassified Conexibacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter	0.75 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.75 %

Level 11

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.21 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	21.64 %
Conexibacter sp. S30A1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter → Conexibacter sp. S30A1	0.75 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.75 %

Associated Scaffolds

Scaffold	Taxonomy	Length
2170459002|FZY7DQ102I4SVN	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	505
2189573000|GPBTN7E01B26OZ	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503
2189573001|GZR05M102FMBYN	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	526
3300000567|JGI12270J11330_10000310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	37693
3300005332|Ga0066388_100030599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5044
3300005332|Ga0066388_104154581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	738
3300005536|Ga0070697_100018494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5494
3300005538|Ga0070731_10406761	Not Available	905
3300005602|Ga0070762_10784450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	644
3300005614|Ga0068856_100053909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	3965
3300005764|Ga0066903_101706309	Not Available	1199
3300005921|Ga0070766_10505995	Not Available	803
3300006175|Ga0070712_102023306	Not Available	504
3300006176|Ga0070765_100993316	Not Available	793
3300006804|Ga0079221_10067571	Not Available	1658
3300006854|Ga0075425_102523315	Not Available	569
3300006893|Ga0073928_10829670	All Organisms → cellular organisms → Bacteria → Terrabacteria group	637
3300009090|Ga0099827_10319767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1316
3300009162|Ga0075423_11457984	Not Available	734
3300009672|Ga0116215_1244628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	785
3300009764|Ga0116134_1026297	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2333
3300010043|Ga0126380_10930638	Not Available	725
3300010043|Ga0126380_11184014	Not Available	657
3300010046|Ga0126384_11455695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	640
3300010048|Ga0126373_10126187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2401
3300010048|Ga0126373_10396714	Not Available	1403
3300010048|Ga0126373_11455274	Not Available	750
3300010154|Ga0127503_10941298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	976
3300010360|Ga0126372_10217787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1607
3300010360|Ga0126372_11345601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	745
3300010360|Ga0126372_12485202	All Organisms → cellular organisms → Bacteria	569
3300010376|Ga0126381_100401164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1910
3300010376|Ga0126381_103074429	Not Available	662
3300010396|Ga0134126_10695023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1156
3300010397|Ga0134124_13153838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	505
3300010398|Ga0126383_10349943	Not Available	1497
3300010876|Ga0126361_11010008	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2060
3300010880|Ga0126350_12109383	Not Available	562
3300011270|Ga0137391_11360201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	557
3300012096|Ga0137389_11476126	Not Available	576
3300012355|Ga0137369_10096229	Not Available	2442
3300012960|Ga0164301_10209437	Not Available	1250
3300012971|Ga0126369_10853142	Not Available	995
3300012971|Ga0126369_13506690	Not Available	514
3300013296|Ga0157374_10423709	Not Available	1330
3300014200|Ga0181526_10222281	Not Available	1206
3300014489|Ga0182018_10113090	Not Available	1580
3300014491|Ga0182014_10599343	Not Available	532
3300014492|Ga0182013_10104782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1897
3300014658|Ga0181519_10011428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6620
3300014839|Ga0182027_10142537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter → Conexibacter sp. S30A1	2831
3300016270|Ga0182036_10173630	Not Available	1556
3300016270|Ga0182036_10767409	Not Available	784
3300016341|Ga0182035_12126375	All Organisms → cellular organisms → Bacteria	509
3300016357|Ga0182032_11961692	Not Available	513
3300016371|Ga0182034_10264092	Not Available	1364
3300016387|Ga0182040_11249609	Not Available	626
3300017821|Ga0187812_1121141	Not Available	849
3300018022|Ga0187864_10365271	Not Available	629
3300018046|Ga0187851_10413804	Not Available	771
3300018058|Ga0187766_10287367	Not Available	1062
3300020579|Ga0210407_10886921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	684
3300020582|Ga0210395_10617055	Not Available	813
3300021181|Ga0210388_10756712	Not Available	844
3300021402|Ga0210385_11028273	Not Available	633
3300021432|Ga0210384_10476285	Not Available	1124
3300021433|Ga0210391_11570130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	504
3300021474|Ga0210390_10638789	Not Available	890
3300022557|Ga0212123_10839194	All Organisms → cellular organisms → Bacteria → Terrabacteria group	548
3300023068|Ga0224554_1119557	Not Available	592
3300024347|Ga0179591_1201773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2835
3300025453|Ga0208455_1047131	Not Available	928
3300025625|Ga0208219_1080543	Not Available	759
3300025910|Ga0207684_10042295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3862
3300025915|Ga0207693_10081054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2540
3300025929|Ga0207664_11139076	Not Available	697
3300025939|Ga0207665_10849540	Not Available	723
3300027497|Ga0208199_1002330	All Organisms → cellular organisms → Bacteria	5748
3300027497|Ga0208199_1135850	Not Available	500
3300027869|Ga0209579_10430157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	716
3300027882|Ga0209590_10168363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1369
3300027889|Ga0209380_10392794	Not Available	814
3300028798|Ga0302222_10333530	Not Available	591
3300028801|Ga0302226_10078022	Not Available	1507
3300028806|Ga0302221_10520987	Not Available	519
3300030013|Ga0302178_10330694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	694
3300030057|Ga0302176_10055284	Not Available	1525
3300030494|Ga0310037_10349497	Not Available	621
3300030509|Ga0302183_10085778	Not Available	1242
3300030730|Ga0307482_1040538	Not Available	1089
3300031525|Ga0302326_10015985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	15742
3300031525|Ga0302326_10557111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1718
3300031549|Ga0318571_10290585	Not Available	612
3300031564|Ga0318573_10234562	Not Available	977
3300031572|Ga0318515_10022193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3011
3300031670|Ga0307374_10647366	Not Available	522
3300031679|Ga0318561_10350950	Not Available	809
3300031680|Ga0318574_10028316	Not Available	2807
3300031682|Ga0318560_10009039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4219
3300031719|Ga0306917_11356259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	549
3300031744|Ga0306918_10899223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	690
3300031748|Ga0318492_10024931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2641
3300031751|Ga0318494_10042607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2374
3300031751|Ga0318494_10043971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2340
3300031778|Ga0318498_10168434	Not Available	996
3300031779|Ga0318566_10132910	Not Available	1231
3300031796|Ga0318576_10420810	Not Available	631
3300031821|Ga0318567_10090039	Not Available	1648
3300031835|Ga0318517_10409777	Not Available	612
3300031880|Ga0318544_10052897	Not Available	1470
3300031893|Ga0318536_10174903	Not Available	1092
3300031897|Ga0318520_10121448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1488
3300031897|Ga0318520_10738636	Not Available	616
3300031947|Ga0310909_11151731	Not Available	629
3300032008|Ga0318562_10156239	Not Available	1314
3300032010|Ga0318569_10001259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7455
3300032010|Ga0318569_10026268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2390
3300032010|Ga0318569_10039948	Not Available	1993
3300032035|Ga0310911_10441813	Not Available	753
3300032042|Ga0318545_10313104	Not Available	564
3300032052|Ga0318506_10487271	Not Available	546
3300032064|Ga0318510_10274983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	697
3300032076|Ga0306924_10427068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1516
3300032160|Ga0311301_10740822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1368
3300032261|Ga0306920_102261913	Not Available	754
3300032261|Ga0306920_104384233	Not Available	506
3300032783|Ga0335079_10810272	Not Available	969
3300032895|Ga0335074_10031830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7382
3300032955|Ga0335076_10713814	Not Available	884
3300033289|Ga0310914_10298022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1454
3300033289|Ga0310914_11590937	Not Available	557
3300033290|Ga0318519_10026966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2659
3300033405|Ga0326727_10680790	Not Available	829

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.01%
Host-Associated	Host-Associated	2.99%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.55%
Aquatic	Environmental → Aquatic	7.46%
Plants	Host-Associated → Plants	2.99%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.34%
Peat	Environmental → Terrestrial → Peat	8.21%
Freshwater	Environmental → Aquatic → Freshwater	5.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.24%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.49%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.75%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.93%
Loam	Environmental → Terrestrial → Soil → Loam	9.70%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	8.21%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.97%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.22%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.24%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.49%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.75%
Clay	Environmental → Terrestrial → Soil → Clay	0.75%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.75%

Subtype

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	36.57%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.37%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	8.21%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.22%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.48%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.99%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.99%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.99%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.24%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.49%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.49%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.49%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.75%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.75%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.75%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.75%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.75%

Habitat

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	27.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.21%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.97%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.48%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.73%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.99%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.24%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.24%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.49%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.49%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.49%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.49%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.49%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.49%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	1.49%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.49%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.49%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.49%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.75%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.75%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.75%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.75%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.75%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.75%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.75%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.75%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.75%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.75%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.75%

Associated Samples

Taxon OID	Sample Name	Habitat Type
2170459002	Grass soil microbial communities from Rothamsted Park, UK - March 2009 direct MP BIO 1O1 lysis 0-21 cm	Environmental
2189573000	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis 0-21cm (T0 for microcosms)	Environmental
2189573001	Grass soil microbial communities from Rothamsted Park, UK - FD2 (NaCl 300g/L 5ml)	Environmental
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental
3300022557	Paint Pots_combined assembly	Environmental
3300023068	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 20-24	Environmental
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental
3300025453	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40 (SPAdes)	Environmental
3300025625	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 shallow-072012 (SPAdes)	Environmental
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental
3300028801	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_3	Environmental
3300028806	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1	Environmental
3300029907	I_Bog_N1 coassembly	Environmental
3300030013	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3	Environmental
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental
3300030509	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2	Environmental
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental
3300031670	Soil microbial communities from Risofladan, Vaasa, Finland - OX-3	Environmental
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E1_02683290	2170459002	Grass Soil	VTGIGPQRSVVVAKARELVAVARRYGYRPEELAAIIEQVSVELP
N55_09721030	2189573000	Grass Soil	RSVVVAKARELVAVARRYGYRPEELTAIIEQVSVELP
FD2_00309950	2189573001	Grass Soil	VSVTGIAPQRSPVVAKARELVAVARRYGFGPEELAEIIEQVSWECP
JGI12270J11330_1000031019	3300000567	Peatlands Soil	MRGVPPRPGVSVTGTGPQRSRVVAKARELVALARQCGYRPQELAEIIELVSAELA*
Ga0066388_1000305991	3300005332	Tropical Forest Soil	GVAPRRSAVIAKARELVALAGSYGYRPEEVAEIIQQMSWEAR*
Ga0066388_1041545813	3300005332	Tropical Forest Soil	TATAAERSPVVTKARELVAVARTYGYRPEELAALIEQVS*
Ga0070697_1000184941	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	RGVSVTGSAPQLSPVVAKARELVAVARRYGFRPEELAQIIEQVSVELP*
Ga0070731_104067613	3300005538	Surface Soil	VTGTGPQRSAVVAKARELVAVARRYGYRPEELTAIIEQVLVELT*
Ga0070762_107844501	3300005602	Soil	GVSVTGIGPQRSVVVAKARELVAVARRYGYRPEELTAIIEQVSVELP*
Ga0068856_1000539095	3300005614	Corn Rhizosphere	GRGVSVTGTGPQRSVVVAKAHELVALARRYGYRPEELTAIIEQVSVELP*
Ga0066903_1017063091	3300005764	Tropical Forest Soil	APRRSPVVAKARELVALARRYGYRPEELAEIIRQVS*
Ga0070766_105059951	3300005921	Soil	GPQRSVVVAKARELVLLARRCGYRPEELVKIIEQVA*
Ga0070712_1020233062	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	TGTGPQRSVVVAKAHELVALARRYGYRPEELTAIIEQVSVELP*
Ga0070765_1009933162	3300006176	Soil	VVAKARELVAVARRYGYRPEELTEIIEQVSLELP*
Ga0079221_100675713	3300006804	Agricultural Soil	VAGPGPQRSVIVAKARELVELARRHGVQPDELTEIIAQVS*
Ga0075425_1025233151	3300006854	Populus Rhizosphere	GTGPQRSVVVAKAHELVALARRYGYRPEELTAIIEQVSVELS*
Ga0073928_108296701	3300006893	Iron-Sulfur Acid Spring	TVTGDAPQRSAVVAQARELVALARRYGYRPEELARIIEQVS*
Ga0099827_103197672	3300009090	Vadose Zone Soil	GVSVTGIAPQRSLVVAKARELVAVARRYGFRPEELAEIIKQVSWERP*
Ga0075423_114579841	3300009162	Populus Rhizosphere	AGPGPQRSVIVAKARELVALARRYGVQPEELAEIIAQVS*
Ga0116215_12446282	3300009672	Peatlands Soil	VTVTGAAPQRSVVIKRARELVKLARRFGYGRDELLQIIEQVP*
Ga0116134_10262974	3300009764	Peatland	HGVTITGAAPQRSVVVKQARELVRLARRFGYDRDELLQIVQQVP*
Ga0126380_109306382	3300010043	Tropical Forest Soil	TVTGIAPQRSAVLAKARELVALARKHGYRPDELAEIIKQVS*
Ga0126380_111840142	3300010043	Tropical Forest Soil	GPQRSAVVAKARELVVLARRYGYQPQELAEIIEQVS*
Ga0126384_114556952	3300010046	Tropical Forest Soil	QRSPVVAKARELVAVARRCGYRPDELAEIIEQVSVELP*
Ga0126373_101261874	3300010048	Tropical Forest Soil	VTVTCAAPQRSAVVTKARELVEVARRLGLGPDELVQVIRQVS*
Ga0126373_103967142	3300010048	Tropical Forest Soil	VVAKARELVELARRYGYLPEGLTKIIDQVSEELP*
Ga0126373_114552742	3300010048	Tropical Forest Soil	VSVTGIAPRRSPVVAKARELVAVARRYGFRPDELAEIIEQVSVELP*
Ga0127503_109412982	3300010154	Soil	QRSPVVAKARELVAVARRYGYRPEELTAIIEQVSVELP*
Ga0126372_102177871	3300010360	Tropical Forest Soil	TVTGLAPQRSAVIAKARELVALARRYGYRPEEVAEIVHRVSWESQ*
Ga0126372_113456011	3300010360	Tropical Forest Soil	RRSPVVAKARELVAVARRHGYRPEELAEIIEQVS*
Ga0126372_124852022	3300010360	Tropical Forest Soil	PQRSAVVAKARELVALARRYGYQPQELAEIIEQVS*
Ga0126381_1004011641	3300010376	Tropical Forest Soil	GVAPGRSLLVAKAHELVALARQYGYQPEELTKIIEQVS*
Ga0126381_1030744292	3300010376	Tropical Forest Soil	SVTGSAPQRSPVVAKARELVAVARRYGFRPEELAEIIEQVSWESP*
Ga0134126_106950232	3300010396	Terrestrial Soil	VSVTGIGPQHSAVVAKARELVAVARRYGYRPEELTAIIEKVSVELP*
Ga0134124_131538382	3300010397	Terrestrial Soil	VVVAKARELVAVARRYGYRPEELTAIIEQVSVELP*
Ga0126383_103499432	3300010398	Tropical Forest Soil	TGLAPQRSAVITKARELVALASRYGYRPEEVAEIVNRVSWESR*
Ga0126361_110100081	3300010876	Boreal Forest Soil	RGRGVTVTGTAPQRSAVVAKARELVEVARWHGLGLEELVQVIRQVS*
Ga0126350_121093832	3300010880	Boreal Forest Soil	GRGVTVTGTAPQRSAVVAKARELVEVARWHGLGLEELVQVIRQVAA*
Ga0137391_113602011	3300011270	Vadose Zone Soil	GRGVSVTGSAPQRSPVVAKARELVAVARRYGFRPEELAQIIEQVSVELP*
Ga0137389_114761261	3300012096	Vadose Zone Soil	VTVSGIGPERSAVVAKARELVALARHHGYRPEELAEIIAQVS*
Ga0137369_100962292	3300012355	Vadose Zone Soil	GRGVTVTGIGPQRSAVVAKARELVALARRYGYQPEELAEIIEQAS*
Ga0164301_102094371	3300012960	Soil	SVTGTGPQRSVVVAKAHELVALARRYGYRPEELTAIIEQVSVELA*
Ga0126369_108531421	3300012971	Tropical Forest Soil	QRSVIVAKARELVLLARRCGYRPDELVQIIEQVP*
Ga0126369_135066901	3300012971	Tropical Forest Soil	LAPQRSAVIAKARELVALARRYGYRPEEVAEIVHNVSLESR*
Ga0157374_104237091	3300013296	Miscanthus Rhizosphere	GTGPQRSVVVAKGHEVVAGGVRYGYRPEELTAIIEQVSVELP*
Ga0181526_102222813	3300014200	Bog	VTGAAPQRSVVVKQARELVRLARRFGYRREELLQIIEQVP*
Ga0182018_101130903	3300014489	Palsa	QRSAVVTKARELVKLARKFGYRSDELLQIVEQVS*
Ga0182014_105993432	3300014491	Bog	GVSVTGVAPHRSLVVDKARELVKLARKFGYRPDELVRIIEQVS*
Ga0182013_101047825	3300014492	Bog	GVSVTGAAPQRSLVVDKARELVKLARKFGYRPEELLRIIEQVS*
Ga0181519_100114288	3300014658	Bog	LLEFSRGHGVTVTGAAPQRSVVVKQARELVKLARRLGYGREELLQIIEQVP*
Ga0182027_101425375	3300014839	Fen	SVTGAAPQRSAVVEKARELVALARRFGYRPDELVQIIEQVS*
Ga0182036_101736301	3300016270	Soil	VTGEAPQRSVIVAKARELVLLARRCGYRPDELMRIIEQVP
Ga0182036_107674091	3300016270	Soil	RGVTVTGEGPQRSIIVAKARELVLLAQRCGYQPEELVKIIEQVA
Ga0182035_121263752	3300016341	Soil	LVVAKARELVALARRCGYRPQELAEIIEMVSVELP
Ga0182032_119616921	3300016357	Soil	TVTGEGPQRSIIIAKARELVLLAQRCGYRPEELVKIIEQVA
Ga0182034_102640922	3300016371	Soil	GRGVTVTGEAPQRSVIVAKARELVLLARRCGYRPDELVQIIEQVP
Ga0182040_112496091	3300016387	Soil	APQRSPVVAKARELVALARRCGYRPQELVELIEQVSVELP
Ga0187812_11211412	3300017821	Freshwater Sediment	GRGVTVTGIGPERSALVTKARELVVLARRCGYRPEEIAEIIARVS
Ga0187864_103652712	3300018022	Peatland	AAPQRSVVVAKARELVKLARRYGYGRDELLRIVEQVP
Ga0187851_104138041	3300018046	Peatland	VTVTGAAPQRSVVVKQARELVKLARRFGYGRDELLQIIEQVP
Ga0187766_102873672	3300018058	Tropical Peatland	IAPQRSPVVAKARELVALARRCGYRPQELVELVKQVSVELP
Ga0210407_108869211	3300020579	Soil	GVSVTGVGPQRSVVVAKARELVAVARRYGYRPEELTAIIEQVSVELP
Ga0210395_106170551	3300020582	Soil	AVTGIAPQRSLVVAKARELVAVARRCGYRPAELAEIIEQVSTELP
Ga0210388_107567122	3300021181	Soil	SVTGIAPQRSLVVAKARELVAVARRCGYRPAELAEIIEQVSMELP
Ga0210385_110282731	3300021402	Soil	SLVVAKARELVAVARRCGYRPAELAEIIEQVSTELP
Ga0210384_104762852	3300021432	Soil	VTGEGPQRSVIVARARELVLLARRCGYRPEELVEIIEQVC
Ga0210391_115701301	3300021433	Soil	QRSVVVAKARELVAVARRYGYRPEELAAIIEQVSVELP
Ga0210390_106387892	3300021474	Soil	MAPQRSLVVAKARELVAVARRCGYRPAELAEIIEQVSMELP
Ga0212123_108391942	3300022557	Iron-Sulfur Acid Spring	GDAPQRSAVVAQARELVALARRYGYRPEELARIIEQVS
Ga0224554_11195572	3300023068	Soil	SRSRGVTVTGAAPQRSAVVNQARELVKLARRFGYGREELLQIIEQVA
Ga0179591_12017731	3300024347	Vadose Zone Soil	VVVAKARELVAVARRYGYRPEELTAIIEQASAELL
Ga0208455_10471312	3300025453	Peatland	APQRGAVVEKARELVALARHFGYHADELVQIIDQVS
Ga0208219_10805432	3300025625	Arctic Peat Soil	ERSAVVTKARELVALARRYGYRPEELATIIAQVSCGAAQ
Ga0207684_100422956	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VTGIAPQRSPVVAKARELVAVARRYGYRPEELAEIIKQVS
Ga0207693_100810544	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VTGTGPQRSVVVAKAHELVALARRYGYRPEELTAIIEQVSVELP
Ga0207664_111390761	3300025929	Agricultural Soil	VSVTGTGPQRSVVVAKAHELVALARRYGYRPEELTAIIEQVSVELP
Ga0207665_108495401	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	PQRSVVVAKAHELVAVARRYGYRPEELTAIIEQVSVELP
Ga0208199_10023302	3300027497	Peatlands Soil	MRGVPPRPGVSVTGTGPQRSRVVAKARELVALARQCGYRPQELAEIIELVSAELA
Ga0208199_11358502	3300027497	Peatlands Soil	APQHSAVVAKARELVTMARRCGYRPAELAEIIEQVSMELP
Ga0209579_104301573	3300027869	Surface Soil	VTGTGPQRSAVVAKARELVAVARRYGYRPEELTAIIEQVLVELT
Ga0209590_101683632	3300027882	Vadose Zone Soil	VTGIAPQRSLVVAKARELVAVARRYGFRPEELAEIIKQVSWERP
Ga0209380_103927942	3300027889	Soil	GPQRSVVVAKARELVLLARRCGYRPEELVKIIEQVA
Ga0302222_103335302	3300028798	Palsa	SGIGPERSAVVAKARELVTLARQCGYRSEELAEIIAQVS
Ga0302226_100780221	3300028801	Palsa	RGRGVTVSGIGPERSAVVAKARELVTLARRYGYRPEELAEIIAQVSWGVVQ
Ga0302221_105209871	3300028806	Palsa	IGPERSAVVAKARELVTLARQCGYRSEELAEIIAQVS
Ga0311329_109407181	3300029907	Bog	TVVGDAPQKSVVIAKARELVRFARSQGYRPDELIEIIQGVR
Ga0302178_103306941	3300030013	Palsa	IGPQRSVVVAKARELVAVARRYGYRPEELAAIIEQVSVELP
Ga0302176_100552841	3300030057	Palsa	VTVSGIGPERSAVVAKARELVTLARRYGYRPEELAEIIAQVSWGVVQ
Ga0310037_103494972	3300030494	Peatlands Soil	VTGIAPQRSAVVTKARELVEVARRCGYRSAELAEIIEQVSMELP
Ga0302183_100857781	3300030509	Palsa	IGPERSAVVAKARELVTLARRYGYRPEELAEIIAQVSWGVVQ
Ga0307482_10405381	3300030730	Hardwood Forest Soil	PERSPVVAKARELVEVARRYGYRPEELAAIIEQVS
Ga0302326_1001598515	3300031525	Palsa	GRGVTVSGIGPERSAVVAKARELVTLARGYGYRPEELAEIIAQVS
Ga0302326_105571111	3300031525	Palsa	GVGPQRGAVVAAARELVALARHCGYRPEELAEIITQVS
Ga0318571_102905852	3300031549	Soil	VTTIAPQRSPVVAKARELVALARRCGYRPQELAELIEQVSVELP
Ga0318573_102345622	3300031564	Soil	PQRSVIVAKARELVLLARRCGYRPDELVQIIEQVP
Ga0318515_100221931	3300031572	Soil	RGVSVTTIAPQRSPVVAKARELVALARRCGYRPQELAELIEQVSVELP
Ga0307374_106473661	3300031670	Soil	DAPHRSVVVDKARELVKLARHFGYTSDELVGIIDRLS
Ga0318561_103509501	3300031679	Soil	SGWTPWRRGRGVTVAGLGPQRSAIVAKAQELVALARRHGVQPEELTEIIAQVS
Ga0318574_100283164	3300031680	Soil	SPVVAKARELVALARRCGYRPQVLAEIIERVSVELP
Ga0318560_100090391	3300031682	Soil	SVTGIAPRRSPVVAKARELVALARRYGYRPDELAEIIRQVS
Ga0306917_113562591	3300031719	Soil	TGVGPQRSAVVAKARELVAVARRYGYRPEELTAIIEQVSVELS
Ga0306918_108992231	3300031744	Soil	RSAVVAKARELVAVARRYGYRSEELAAIIEQVSVELP
Ga0318492_100249314	3300031748	Soil	GIGPERSAVVAKARELVALARRCGYRPEELAEIIAQLS
Ga0318494_100426071	3300031751	Soil	VTPRPRRSAIVAKAHELVALARRFGLQPEELTEIIAQVS
Ga0318494_100439711	3300031751	Soil	AVVAKARELVAVARRYGYRPEELTAIIEQVSVELP
Ga0318498_101684342	3300031778	Soil	LPALLAGNRSAVVAKARELVALARRCGYRPEELAEIIAQLS
Ga0318566_101329102	3300031779	Soil	RGVSVTGIAPERSPVVAKARELVAVARQYGYRPEDLAAIIEQVS
Ga0318576_104208102	3300031796	Soil	RGRGVSVTGIAPERSPVVAKARELVAVARQYGYRPEDLAAIIEQVS
Ga0318567_100900391	3300031821	Soil	LGPQRSAIVAKAHELVALARRFGLQPEELTEIIAQVS
Ga0318517_104097771	3300031835	Soil	AGLGPQRSVIVAKARELVALARRHGVQPEELTEIIAQVS
Ga0318544_100528972	3300031880	Soil	PQRSVIVAKARELVALARRHGVQPEELTEIIAQVS
Ga0318536_101749032	3300031893	Soil	VTVAGLGPQRSVIVAKARELVALARRHGVQPEELTEIIAQVS
Ga0318520_101214483	3300031897	Soil	AVVAKARELVAVARRYGYRSEELAAIIEQVSVELP
Ga0318520_107386362	3300031897	Soil	TGEAPQRSVIVAKARELVLLARRCGYRPDELVQIIEQVP
Ga0310909_111517312	3300031947	Soil	TTIAPQRSPVVAKARELVALARRCGYRPQELAELIEQVSVELP
Ga0318562_101562391	3300032008	Soil	GPQRSAIVAKAHELVALARRLGLQPEELTEIIAQVS
Ga0318569_100012599	3300032010	Soil	GVTVTGEAPQRSVIVAKARELVLLARRCGYRPDELMRIIEQVP
Ga0318569_100262681	3300032010	Soil	VTGIAPRRSPVVAKARELVALARRYGYRPDELAEIIRQVS
Ga0318569_100399483	3300032010	Soil	TVAGLGPQRSVIVAKARELVALARRHGVQPEELTEIIAQVS
Ga0310911_104418132	3300032035	Soil	GVTVTGEAPQRSVIVAKARELVLLARRCGYRPDELVQIIEQVP
Ga0318545_103131041	3300032042	Soil	IAPRRSPVVAKARELVALARRCGYRPQVLAEIIERVSVELP
Ga0318506_104872711	3300032052	Soil	RGVTVAGQGPQRSVIVAKARELVALARRHGVQPEELTEIIAQVS
Ga0318510_102749831	3300032064	Soil	HQPLLPQRPQRSAVVAKARELVTVARRYGYRSEELAAIIEQVSVELP
Ga0306924_104270681	3300032076	Soil	QRSAVVAKARELVAVARRNGYQPDELTAIIEQVSVELP
Ga0311301_107408222	3300032160	Peatlands Soil	VTVTGAAPQRSVVIKRARELVKLARRFGYGRDELLQIIEQVP
Ga0306920_1022619132	3300032261	Soil	TIAPQRSPVVAKARELVALARRCGYRPQELVELIEQVSVELP
Ga0306920_1043842332	3300032261	Soil	VTALAPQRSVVVAKARELVAAARRFGYRPEELAEIIEQVS
Ga0335079_108102722	3300032783	Soil	PQRSVVVAKARELVAVARQYGYRPEDLTEIIRQVS
Ga0335074_100318308	3300032895	Soil	GRGVSVTGIAPQRSLVVTKARELVEVARRCGYRPAELAEIIEQVSAELP
Ga0335076_107138142	3300032955	Soil	VSVTGTGPQRSVVVGKARGLVAVARRYGYRPDELTALIEQVSVELP
Ga0310914_102980224	3300033289	Soil	PQRGAVVAKARELVAVARRYGYRPDELTAIIEQVSVELS
Ga0310914_115909371	3300033289	Soil	VTVTGEAPQRSVIVAKARELVLLARRYGYRPDELVRIIEQVP
Ga0318519_100269665	3300033290	Soil	DHAPLRGRGVTVTGEAPQRSVIVAKARELVLLARRCGYRPDELMRIIEQVP
Ga0326727_106807902	3300033405	Peat Soil	VSVTGAAPQRSLVVDKARELVKLARKFGYRPDELVRIIEQVS