NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F059163

Metagenome / Metatranscriptome Family F059163

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F059163
Family Type Metagenome / Metatranscriptome
Number of Sequences 134
Average Sequence Length 44 residues
Representative Sequence RVRLLLDEELVRFVEVIDAAGACDDVAAIRLYQAEFSLEAVR
Number of Associated Samples 125
Number of Associated Scaffolds 134

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 99.25 %
% of genes from short scaffolds (< 2000 bps) 96.27 %
Associated GOLD sequencing projects 121
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(38.060 % of family members)
Environment Ontology (ENVO) Unclassified
(29.851 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(45.522 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 52.38%    β-sheet: 0.00%    Coil/Unstructured: 47.62%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 134 Family Scaffolds
PF01926MMR_HSR1 78.36
PF00350Dynamin_N 8.96
PF00891Methyltransf_2 1.49
PF01546Peptidase_M20 0.75



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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001867|JGI12627J18819_10176819All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae865Open in IMG/M
3300004082|Ga0062384_100209734All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura1155Open in IMG/M
3300005367|Ga0070667_100439924All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1190Open in IMG/M
3300005434|Ga0070709_10183403All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1471Open in IMG/M
3300005531|Ga0070738_10078098All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1872Open in IMG/M
3300005538|Ga0070731_10197605All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1335Open in IMG/M
3300005610|Ga0070763_10330162All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae844Open in IMG/M
3300005937|Ga0081455_10718310All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae635Open in IMG/M
3300006046|Ga0066652_100493686All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae1136Open in IMG/M
3300006176|Ga0070765_100351317All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1370Open in IMG/M
3300006806|Ga0079220_10456896All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae857Open in IMG/M
3300006854|Ga0075425_100556144All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae1320Open in IMG/M
3300009101|Ga0105247_10209599All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1314Open in IMG/M
3300009520|Ga0116214_1347344All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales574Open in IMG/M
3300009672|Ga0116215_1383632All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia609Open in IMG/M
3300009698|Ga0116216_10705618All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae606Open in IMG/M
3300009698|Ga0116216_10944032All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae516Open in IMG/M
3300009700|Ga0116217_10608844All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae680Open in IMG/M
3300009792|Ga0126374_11368942All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia575Open in IMG/M
3300009839|Ga0116223_10057811All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2514Open in IMG/M
3300010043|Ga0126380_11626312All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium577Open in IMG/M
3300010047|Ga0126382_10909957All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae762Open in IMG/M
3300010047|Ga0126382_11190305All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae682Open in IMG/M
3300010048|Ga0126373_11772160All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii681Open in IMG/M
3300010152|Ga0126318_11180479All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae650Open in IMG/M
3300010320|Ga0134109_10102151All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia999Open in IMG/M
3300010373|Ga0134128_10491312All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1369Open in IMG/M
3300010379|Ga0136449_102816492All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia686Open in IMG/M
3300011086|Ga0138564_1036188All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae575Open in IMG/M
3300012199|Ga0137383_10675780All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae755Open in IMG/M
3300012496|Ga0157353_1049331All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium508Open in IMG/M
3300012917|Ga0137395_10987371All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae604Open in IMG/M
3300012948|Ga0126375_10666330All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria805Open in IMG/M
3300014169|Ga0181531_10891578All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria556Open in IMG/M
3300014654|Ga0181525_10157837All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1243Open in IMG/M
3300016387|Ga0182040_10763573All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria794Open in IMG/M
3300016445|Ga0182038_11678316All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium572Open in IMG/M
3300017924|Ga0187820_1127462All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria751Open in IMG/M
3300017928|Ga0187806_1160051All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria747Open in IMG/M
3300017932|Ga0187814_10200885All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia749Open in IMG/M
3300017943|Ga0187819_10116078All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1598Open in IMG/M
3300017972|Ga0187781_10587764All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii802Open in IMG/M
3300017973|Ga0187780_11229164All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria549Open in IMG/M
3300017994|Ga0187822_10348173All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae534Open in IMG/M
3300018006|Ga0187804_10577479All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia510Open in IMG/M
3300020070|Ga0206356_11572329All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae544Open in IMG/M
3300020582|Ga0210395_10670376All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii776Open in IMG/M
3300021086|Ga0179596_10197711All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia978Open in IMG/M
3300021180|Ga0210396_11556682All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium541Open in IMG/M
3300021377|Ga0213874_10311255All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae595Open in IMG/M
3300021402|Ga0210385_10177650All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1538Open in IMG/M
3300021405|Ga0210387_11641594All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia546Open in IMG/M
3300021407|Ga0210383_11098388All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria672Open in IMG/M
3300021420|Ga0210394_11211797All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria648Open in IMG/M
3300021432|Ga0210384_10711303All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria898Open in IMG/M
3300021475|Ga0210392_11502560All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae503Open in IMG/M
3300021478|Ga0210402_10663975All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia964Open in IMG/M
3300021559|Ga0210409_10872847All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria773Open in IMG/M
3300022527|Ga0242664_1031918All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii890Open in IMG/M
3300022718|Ga0242675_1096861All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae563Open in IMG/M
3300022722|Ga0242657_1183402All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae570Open in IMG/M
3300024245|Ga0247677_1022618All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales899Open in IMG/M
3300024317|Ga0247660_1099136All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium505Open in IMG/M
3300025905|Ga0207685_10289359All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria807Open in IMG/M
3300025920|Ga0207649_10074567All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales2177Open in IMG/M
3300026889|Ga0207745_1010104All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia895Open in IMG/M
3300027158|Ga0208725_1067516All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria523Open in IMG/M
3300027648|Ga0209420_1094656All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii853Open in IMG/M
3300027680|Ga0207826_1128785All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia693Open in IMG/M
3300027765|Ga0209073_10125409All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria929Open in IMG/M
3300027857|Ga0209166_10103112All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1591Open in IMG/M
3300028381|Ga0268264_10672580All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1026Open in IMG/M
3300028789|Ga0302232_10346560All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria731Open in IMG/M
3300028799|Ga0307284_10137586All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria936Open in IMG/M
3300028806|Ga0302221_10395680All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria602Open in IMG/M
3300028906|Ga0308309_10145395All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1901Open in IMG/M
3300028906|Ga0308309_10850171All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii792Open in IMG/M
3300028906|Ga0308309_11299251All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii625Open in IMG/M
3300030046|Ga0302305_1258375All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria611Open in IMG/M
3300030399|Ga0311353_10813651All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii796Open in IMG/M
3300030520|Ga0311372_13017297All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria508Open in IMG/M
3300030629|Ga0210268_1072802All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria876Open in IMG/M
3300030730|Ga0307482_1016121All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1478Open in IMG/M
3300030741|Ga0265459_11844043All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii715Open in IMG/M
3300030906|Ga0302314_11962316All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii504Open in IMG/M
3300031525|Ga0302326_12180729All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii708Open in IMG/M
3300031544|Ga0318534_10324974All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria886Open in IMG/M
3300031544|Ga0318534_10412982All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria775Open in IMG/M
3300031545|Ga0318541_10874682All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria501Open in IMG/M
3300031564|Ga0318573_10403742All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae734Open in IMG/M
3300031572|Ga0318515_10281654All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerimonospora → Sphaerimonospora mesophila891Open in IMG/M
3300031572|Ga0318515_10323977All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria826Open in IMG/M
3300031573|Ga0310915_10583008All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria793Open in IMG/M
3300031679|Ga0318561_10198436All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1088Open in IMG/M
3300031680|Ga0318574_10727963All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae581Open in IMG/M
3300031723|Ga0318493_10683662All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae575Open in IMG/M
3300031724|Ga0318500_10292126All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria797Open in IMG/M
3300031744|Ga0306918_10814163All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii729Open in IMG/M
3300031747|Ga0318502_11028953All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria503Open in IMG/M
3300031754|Ga0307475_10588262All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae891Open in IMG/M
3300031769|Ga0318526_10192892All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria832Open in IMG/M
3300031769|Ga0318526_10485118All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia505Open in IMG/M
3300031771|Ga0318546_10450406All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria901Open in IMG/M
3300031777|Ga0318543_10356353All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria655Open in IMG/M
3300031777|Ga0318543_10581749All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria502Open in IMG/M
3300031778|Ga0318498_10194630All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria920Open in IMG/M
3300031779|Ga0318566_10412726All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria664Open in IMG/M
3300031781|Ga0318547_11069098All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria505Open in IMG/M
3300031796|Ga0318576_10591903All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria522Open in IMG/M
3300031798|Ga0318523_10468195All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae624Open in IMG/M
3300031799|Ga0318565_10618178All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria520Open in IMG/M
3300031805|Ga0318497_10456970All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae715Open in IMG/M
3300031823|Ga0307478_10010918All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales6244Open in IMG/M
3300031831|Ga0318564_10237767All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria808Open in IMG/M
3300031833|Ga0310917_11150536All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium517Open in IMG/M
3300031896|Ga0318551_10879570All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii522Open in IMG/M
3300031897|Ga0318520_10830215All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria580Open in IMG/M
3300031938|Ga0308175_102739613All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria551Open in IMG/M
3300031942|Ga0310916_11729650All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria505Open in IMG/M
3300031946|Ga0310910_11539366All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria509Open in IMG/M
3300031954|Ga0306926_10135459All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3046Open in IMG/M
3300032001|Ga0306922_11783333All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii606Open in IMG/M
3300032066|Ga0318514_10195987All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1057Open in IMG/M
3300032067|Ga0318524_10451970All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia672Open in IMG/M
3300032074|Ga0308173_10273800All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1440Open in IMG/M
3300032076|Ga0306924_12512139All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria516Open in IMG/M
3300032770|Ga0335085_10048371All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia5772Open in IMG/M
3300032783|Ga0335079_10865387All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii931Open in IMG/M
3300032895|Ga0335074_11190876All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae644Open in IMG/M
3300032954|Ga0335083_10325845All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1339Open in IMG/M
3300033158|Ga0335077_10996022All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae836Open in IMG/M
3300033158|Ga0335077_11068179All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae800Open in IMG/M
3300033289|Ga0310914_10748799All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii874Open in IMG/M
3300033290|Ga0318519_10247176All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae1031Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil38.06%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil5.97%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa5.22%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment4.48%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil4.48%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.48%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil4.48%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil3.73%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil2.24%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil2.24%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.24%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil2.24%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog1.49%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.49%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.49%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.49%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.49%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.49%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.75%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.75%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.75%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.75%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.75%
Unplanted SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil0.75%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.75%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.75%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.75%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.75%
Plant RootsHost-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots0.75%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.75%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.75%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.75%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.75%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001867Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)EnvironmentalOpen in IMG/M
3300004082Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3EnvironmentalOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005531Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2EnvironmentalOpen in IMG/M
3300005538Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1EnvironmentalOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009520Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaGEnvironmentalOpen in IMG/M
3300009672Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaGEnvironmentalOpen in IMG/M
3300009698Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaGEnvironmentalOpen in IMG/M
3300009700Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaGEnvironmentalOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300009839Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaGEnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010152Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300011086Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 49 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012496Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.090610EnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300014169Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaGEnvironmentalOpen in IMG/M
3300014654Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaGEnvironmentalOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300017924Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5EnvironmentalOpen in IMG/M
3300017928Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1EnvironmentalOpen in IMG/M
3300017932Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4EnvironmentalOpen in IMG/M
3300017943Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4EnvironmentalOpen in IMG/M
3300017972Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017973Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MGEnvironmentalOpen in IMG/M
3300017994Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2EnvironmentalOpen in IMG/M
3300018006Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4EnvironmentalOpen in IMG/M
3300020070Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300021086Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021377Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7Host-AssociatedOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021475Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300022527Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022718Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022722Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300024245Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK18EnvironmentalOpen in IMG/M
3300024317Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK01EnvironmentalOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026889Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 57 (SPAdes)EnvironmentalOpen in IMG/M
3300027158Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF011 (SPAdes)EnvironmentalOpen in IMG/M
3300027648Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027680Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)EnvironmentalOpen in IMG/M
3300027765Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)EnvironmentalOpen in IMG/M
3300027857Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028789Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3EnvironmentalOpen in IMG/M
3300028799Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123EnvironmentalOpen in IMG/M
3300028806Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300030046Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_3EnvironmentalOpen in IMG/M
3300030399II_Palsa_E2 coassemblyEnvironmentalOpen in IMG/M
3300030520III_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300030629Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO153-ARE093SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030730Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030741Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assemblyEnvironmentalOpen in IMG/M
3300030906Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3EnvironmentalOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031544Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26EnvironmentalOpen in IMG/M
3300031545Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26EnvironmentalOpen in IMG/M
3300031564Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21EnvironmentalOpen in IMG/M
3300031572Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031679Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23EnvironmentalOpen in IMG/M
3300031680Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22EnvironmentalOpen in IMG/M
3300031723Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23EnvironmentalOpen in IMG/M
3300031724Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20EnvironmentalOpen in IMG/M
3300031744Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)EnvironmentalOpen in IMG/M
3300031747Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031769Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031777Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24EnvironmentalOpen in IMG/M
3300031778Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24EnvironmentalOpen in IMG/M
3300031779Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22EnvironmentalOpen in IMG/M
3300031781Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20EnvironmentalOpen in IMG/M
3300031796Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24EnvironmentalOpen in IMG/M
3300031798Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19EnvironmentalOpen in IMG/M
3300031799Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21EnvironmentalOpen in IMG/M
3300031805Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031831Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20EnvironmentalOpen in IMG/M
3300031833Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178EnvironmentalOpen in IMG/M
3300031896Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19EnvironmentalOpen in IMG/M
3300031897Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031942Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032066Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18EnvironmentalOpen in IMG/M
3300032067Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22EnvironmentalOpen in IMG/M
3300032074Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300032895Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3EnvironmentalOpen in IMG/M
3300032954Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M
3300033290Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12627J18819_1017681923300001867Forest SoilRADLYERVRLLLNEELVRFVEVIDAAGECDDTAAIRVYQAEYSLEAVR*
Ga0062384_10020973413300004082Bog Forest SoilATAREDLTHRIQLLLDEEMVRFVEVIESAGPCEDVAAIRLYQAEYSLEAVR*
Ga0070667_10043992423300005367Switchgrass RhizosphereADLTERVRLLLDEELVRFVEVIDAAGDCDDVAAIRLYQAEFSLEAVR*
Ga0070709_1018340313300005434Corn, Switchgrass And Miscanthus RhizosphereTERVRLLLDEELVRFVEVIDAAGDCDDVAAIRVYQAEFSLEAVR*
Ga0070738_1007809823300005531Surface SoilADLLERIRLLLDEEMVRYTEVIEAAGSCDGVAAIRLYQAEYSLEAVR*
Ga0070731_1019760523300005538Surface SoilLDEETVRFVEVIEGAGDCEDVAAVRLYQAEFSLEAVR*
Ga0070763_1033016213300005610SoilDEEMVRYVEVIESAGPCDDVAAIRLYQAEYSLEAVR*
Ga0081455_1071831013300005937Tabebuia Heterophylla RhizosphereTERVRLLLDEELVRFVEVIDAAGDCDDVAAIRLYQAEFSLEAVR*
Ga0066652_10049368623300006046SoilLDEELVRFVEVIDAAGDCDDVAAIRLYQAEFSLEAVR*
Ga0070765_10035131723300006176SoilDLIHRVRLLLDEEMVRYVEVIESAGPCDDVAAIRLYQAEYSLEAVR*
Ga0079220_1045689613300006806Agricultural SoilLLLDEELVRFVEVIDAAGACDDVAAIRLYQAEFSLEAVR*
Ga0075425_10055614423300006854Populus RhizosphereELVRFVEVIDAAGDCDDVAAIRVYQAEFSLEAVR*
Ga0105247_1020959923300009101Switchgrass RhizosphereVRLLLDEELVRFVWVIEAAGDCDDVAAIRVYQAEFSLEAVR*
Ga0116214_134734423300009520Peatlands SoilAEILARARADLLHRVRLLLDEETVRFVEVIERAGPCEDVAAIRLYQAEFSLEAVR*
Ga0116215_138363223300009672Peatlands SoilELVRFVEVIDAAGPCDDVAAIRLYQAEFSLEAVR*
Ga0116216_1070561823300009698Peatlands SoilDRVRLLLDEELVRFVEVLDAAGACDDVAAIRLYQAELSLEAVR*
Ga0116216_1094403223300009698Peatlands SoilLDRVRLLLDEELVRFVEVLDAAGACDDVAAIRLYQAEFSLEAVR*
Ga0116217_1060884423300009700Peatlands SoilDRVRLLLNEELVRFVEVLDAAGTCDDVAAIRLYQAEFSLEAVR*
Ga0126374_1136894213300009792Tropical Forest SoilVRLLLDEELVRFVEVLDAAGDCDDVAAIRLYQAEFSLEAVR*
Ga0116223_1005781113300009839Peatlands SoilRLLLDEEMVRFVEVIELAGPCEDVAAIRLYQAEYSLEAVR*
Ga0126380_1162631213300010043Tropical Forest SoilDLYEQIRLLLNEELVKFVEVIDAAEECDDAAAIRVYQAEYSLEAVR*
Ga0126382_1090995723300010047Tropical Forest SoilADLTERVRLLLDEELVRFVEVIDAAGDCEDVAAIRLYQAEFSLEAVR*
Ga0126382_1119030513300010047Tropical Forest SoilLFERVRLLLDEELVRFVEVLDAAGDCDDVAAIRLYQAEFSLEAVR*
Ga0126373_1177216023300010048Tropical Forest SoilDEELVRFVEVIESAGPCDDVAAIRLYQAEYSLEAVR*
Ga0126318_1118047913300010152SoilGLLARARADLSDRVRLLLDEELVRFVEVIDAAGACDDVAAIRLYQAEFSLEAVR*
Ga0134109_1010215113300010320Grasslands SoilARADLTERVRLLLDEELVRFVEVIDAAGDCDDVAAIRLYQAEFSLEAVR*
Ga0134128_1049131223300010373Terrestrial SoilLLLDEELVRFVEVIDAAGDCDDVAAIRLYQAEFSLEAVR*
Ga0136449_10281649233300010379Peatlands SoilDRVRLLLDEELVRFVEVLDAAGACDDVAAIRLYQAEYSLEAVR*
Ga0138564_103618823300011086Peatlands SoilIHRVRLLLDEEMVRFVEVIELAGPCEDVAAIRLYQAEYSLEAVR*
Ga0137383_1067578013300012199Vadose Zone SoilRLLLDEELVRFVEVIDAAGDCDDVAAIRVYQAEFSLEAVR*
Ga0157353_104933113300012496Unplanted SoilEELVRFAEVIDAAGECDDTAAIRVYQAEYSLEAVR*
Ga0137395_1098737113300012917Vadose Zone SoilDLFDRVRLLLDEELVRFVEVIDAAGECDDVAAIRLYQAEFSLEAVR*
Ga0126375_1066633013300012948Tropical Forest SoilILARARADLTERVRLLLDEELVRFVEVIDAAGDCEDVAAIRLYQAEFSLEAVR*
Ga0181531_1089157823300014169BogLDRVRLLLDEELVRFIEVIDAAGHCDDVAAIRLYQAEFSLEAVR*
Ga0181525_1015783713300014654BogDLIQRVRLLLDEEMVRYVEVIEEAGPCDEVAAIRLYQAEYSLEAVR*
Ga0182040_1076357323300016387SoilARADLYERVRLLLNEELVRFVEVIDAAGECDDIAAIRLYQAEYSLEAVR
Ga0182038_1167831623300016445SoilFDEELLRFAEVIDAAGDCEDVAAIRVYQAEYSLEAVR
Ga0187820_112746223300017924Freshwater SedimentADLIHRVRLLLDEELLRFVEVIESAGPCEDVAAIRLYQAEYSLEAVR
Ga0187806_116005123300017928Freshwater SedimentRVRLLLNEELVRFVEVLDAAGACDDVAAIRLYQAEFSLEAVR
Ga0187814_1020088513300017932Freshwater SedimentLLLNEELLRFAEVIEAAGPCEDVAAIRLYQAEFSLEAVR
Ga0187819_1011607823300017943Freshwater SedimentRLLLDEEMVRFVEVIELAGPCDDVAAIRLYQAEYSLEAVR
Ga0187781_1058776423300017972Tropical PeatlandEEMVRFVEVIESAGPCDDVAAIRLYQAEYSLEAVR
Ga0187780_1122916423300017973Tropical PeatlandMLTEILAGARADLLARVRLLLDEELVRFVEVIDAAGACEDVAAIRLYQAEFSLEAVR
Ga0187822_1034817313300017994Freshwater SedimentADLFDRVGLLLDEELVRFVEVLDAAGSCDDVAAIRLYQAEFSLEAVR
Ga0187804_1057747923300018006Freshwater SedimentLLDEEMVRFVEVIESAGPCEDAAAIRLYQAEYSLEAVR
Ga0206356_1157232923300020070Corn, Switchgrass And Miscanthus RhizosphereLLLDEELVRFVEVIDAAGDCDDVAAIRIYQAEFSLEAVR
Ga0210395_1067037623300020582SoilRGNGQVREVIESAGPCDDVAAIRLYQAEYSLEAVR
Ga0179596_1019771113300021086Vadose Zone SoilEELVRFVEVIDAAGECDDVAAIRLYQAEFSLEAVR
Ga0210396_1155668213300021180SoilNEELVRFVEVIDAAGDCDDVAAIRVYQAEFSLEAVR
Ga0213874_1031125523300021377Plant RootsTEILARARADLSDRVRLLLDEELVRFVGVVDAAGDCDDVAAIRLYQAEFSLEAVR
Ga0210385_1017765023300021402SoilRARADLLDRIRLLLDEELVRFVEVIDAAGPCDDVAAIRLYQAEFSLEAVR
Ga0210387_1164159413300021405SoilEEMVRYIEVIESAGPCDDVAAIRLYQAEYSLEAVR
Ga0210383_1109838813300021407SoilERVRLLLDEELVRFVEVIDAAGDCDDVAAIRVYQAEFSLEAVR
Ga0210394_1121179723300021420SoilDLLDRVRLLLDEELVRFIEVLDAAGACDDVAAIRLYQAEFSLEAVR
Ga0210384_1071130313300021432SoilTERVRLLLDEELVRFVEVIDAAGDCDDVAAIRVYQAEFSLEAVR
Ga0210392_1150256013300021475SoilRLLLDEELVRFVEVIDAAGDCDDVAAIRVYQAEFSLEAVR
Ga0210402_1066397523300021478SoilDEELVRFVEVIDAAGDCDDVAAIRVYQAEFSLEAVR
Ga0210409_1087284723300021559SoilLIHRVRLLLDEELLRFVEVIESAGPCEDVAAIRLYQAEYSLEAVR
Ga0242664_103191823300022527SoilDEEMVRYVEVIESAGPCDDVAAIRLYQAEYSLEAVR
Ga0242675_109686113300022718SoilADLTELVRLLLDEELVRFVEVIDAAGDCDDVAAIRLYQAEFSLEAVR
Ga0242657_118340223300022722SoilRADLTERVRLLLDEELVRFVEVIDAAGDCDDVAAIRVYQAEFSLEAVR
Ga0247677_102261823300024245SoilELLNGLLARARADLSDRVRLLLDEELVRFVEVIDAAGACDDVAAIRLYQAEFSLEAVR
Ga0247660_109913613300024317SoilLDEELVRFVEVIDAAGDCDDVAAIRLYQAEFSLEAVR
Ga0207685_1028935913300025905Corn, Switchgrass And Miscanthus RhizosphereRVRLLLDEELVRFVEVIDAAGACDDVAAIRLYQAEFSLEAVR
Ga0207649_1007456733300025920Corn RhizosphereRLLLDEELVRFVEVIDAAGDCDDVAAIRLYQAEFSLEAVR
Ga0207745_101010423300026889Tropical Forest SoilLLLNEELLRFVEVIEAAGPCEDVAAIRLYQAEFSLEAVR
Ga0208725_106751613300027158Forest SoilTEILARARADLLDRIRLLLDEELVRFVEVIDAAGPCDDVAAIRLYQAEFSLEAVR
Ga0209420_109465623300027648Forest SoilRLLLDEEMVRYVEVIEEAGPCDEVAAIRLYQAEYSLEAVR
Ga0207826_112878513300027680Tropical Forest SoilLLDEEMVRFVEVIESAGPCEDVAAIRLYQAEYSLEAVR
Ga0209073_1012540923300027765Agricultural SoilARARADLTERVRLLLDEELVRFVEVIDAAGDCDDVAAIRLYQAEFSLEAVR
Ga0209166_1010311213300027857Surface SoilRADLIHRVRLLLDEEMVRYVEVIESAGPCDDVAAIRLYQAEYSLEAVR
Ga0268264_1067258013300028381Switchgrass RhizosphereDEELVRFVEVIDAAGDCDDVAAIRLYQAEFSLEAVR
Ga0302232_1034656023300028789PalsaRADLLDRIRLLLDEELVRFIEVIDAAGPCDDVAAIRLYQAEFSLEAVR
Ga0307284_1013758623300028799SoilRIRLLLDEELVRFVEVIDAAGDCDDVAAIRLYQAEFSLEAVR
Ga0302221_1039568023300028806PalsaARARADLLDRIRLLLDEELVRFIEVIDAAGPCDDVAAIRLYQAEFSLEAVR
Ga0308309_1014539513300028906SoilADLLDRIRLLLDEELVRFVEVIDAAGPCDDVAAIRLYQAEFSLEAVR
Ga0308309_1085017123300028906SoilRLLLDEELVRFVEVLDAAGACDDVAAIRLYQAEFSLEAVR
Ga0308309_1129925123300028906SoilLLDEEMVRYVEVIESAGPCDDVAAIRLYQAEYSLEAVR
Ga0302305_125837523300030046PalsaDRIRLLLDEELVRFVEVIDAAGPCDDVAAIRLYQAEFSLEAVR
Ga0311353_1081365113300030399PalsaEEMVRYVEVIESAGPCDEVAAIRLYQAEYSLEAVR
Ga0311372_1301729723300030520PalsaQRVRLLLDEEMVRYVEVIESAGPCDEVAAIRLYQAEYSLEAVR
Ga0210268_107280223300030629SoilAGILARARADLLDRVRLLLDEELVRFVEVIDAAGPCDDVAAIRLYQAEFSLEAVR
Ga0307482_101612123300030730Hardwood Forest SoilLLLDEEMVRFVEVIDSAGPCDDVAAIRLYQAEYSLEAVR
Ga0265459_1184404323300030741SoilDEELVRFFEVIDAAGPCDDVAAVRLYQAEFSLEAVR
Ga0302314_1196231623300030906PalsaRVRLLLDEEMDRYVEEIESAGPCDEVAAIRLYQAEYSLEAVR
Ga0302326_1218072913300031525PalsaLLLDEELVRFVEVIDAAGPCDDVAAIRLYQAEFSLEAVR
Ga0318534_1032497413300031544SoilHRIRLLLDEEMVRFVEVLESAGPCDDVAAIRLYQAEYSLEAVR
Ga0318534_1041298223300031544SoilDLTHRVRLLLDEELLRFVEVIESAGPCHDVAAIRLYQAEYSLEAVR
Ga0318541_1087468213300031545SoilADLYERVRLLLNEELVRFVEVIDAAGECDDVAAIRLYQAEFSLEAVR
Ga0318573_1040374213300031564SoilRLLLDEEMVRFVEVLESAGPCDDVAAIRLYQAEYSLEAVR
Ga0318515_1028165423300031572SoilVRLLLDEELVRFVEVIESAGPCDDVAAIRLYQAEYSLEAVR
Ga0318515_1032397733300031572SoilEELVRFVEVIESAGPCDDVAAIRLYQAEYSLEAVR
Ga0310915_1058300823300031573SoilARARADLYERVRLLLNEELVRFVEVIDAAGECDDVAAIRLYQAEFSLEAVR
Ga0318561_1019843613300031679SoilAERLTGILARARADLYERVRLLLNEELVRFVEVIDAAGECDDVAAIRLYQAEFSLEAVR
Ga0318574_1072796323300031680SoilLLDEEMVRFVEVLESAGPCDDVAAIRLYQAEYSLEAVR
Ga0318493_1068366223300031723SoilFDEELLRFVEVIDTAGSCDDVAAIRLYQAEFSLEAVR
Ga0318500_1029212613300031724SoilAQARADLSHRVRLLLDEEMVRFVEVIESAGPCHDVAAIRLYQAEYSLEAVR
Ga0306918_1081416313300031744SoilDEELVRFVEVIESAGPCDDVAAIRLYQAEYSLEAVR
Ga0318502_1102895323300031747SoilILAQARADLIHRVRLLLDEELLRFVEVIESAGPCEDVAAIRLYQAEYSLEAVR
Ga0307475_1058826223300031754Hardwood Forest SoilRVQLLLDEEMVRYVEVIESAGACDDVAAIRLYQAEYSLEAVR
Ga0318526_1019289223300031769SoilAHADLIHRVRLLLDEELVRFVEVIESAGPCDDVAAIRLYQAEYSLEAVR
Ga0318526_1048511823300031769SoilEELLRFVEVIESAGPCHDVAAIRLYQAEYSLEAVR
Ga0318546_1045040623300031771SoilSRPVARADLTHRIRLLLDEEMVRFVEVLESAGPCDDVAAIRLYQAEYSLEAVR
Ga0318543_1035635313300031777SoilVMLTEILARARADLDHRVRLLLDEELVRFVEVLDAAGACDDVAAIRLYQAEFSLEAVR
Ga0318543_1058174923300031777SoilILAQARADLSHRVRLLLDEEMVRFVEVIESAGPCHDVAAIRLYQAEYSLEAVR
Ga0318498_1019463023300031778SoilDLIHRLRLLLDEELVRFVEVIESAGPCDDVAAIRLYQAEYSLEAVR
Ga0318566_1041272623300031779SoilARARADLIHRVRLLLDEELVRFVEVIESAGPCDDVAAIRLYQAEYSLEAVR
Ga0318547_1106909813300031781SoilAMLTEILARARADLLDRVRLLLDEELVRFVEVIDAAGDCEDVAAIRLYQAEFSLEAVR
Ga0318576_1059190323300031796SoilARADLYERVRLLLNEELVRFVEVIDAAGECDDVAAIRLYQAEFSLEAVR
Ga0318523_1046819513300031798SoilVRLLLDEELLRFVEVIESAGPCEDVAAIRLYQAEYSLEAVR
Ga0318565_1061817813300031799SoilEKLTGILARARADLYERVRLLLNEELVRFVEVIDAAGECDDVAAIRLYQAEFSLEAVR
Ga0318497_1045697013300031805SoilDEELVRFVEVLDAAGACDDVAAIRLYQAEYSLEAVR
Ga0307478_1001091813300031823Hardwood Forest SoilRADLLHRVQLLLDEEMVRYVEVIESAGACDDVAAIRLYQAEYSLEAVR
Ga0318564_1023776723300031831SoilTGILARARADLYERVRLLLNEELVRFVEVIDAAGECDDVAAIRLYQAEFSLEAVR
Ga0310917_1115053623300031833SoilMVTGILARARADLYERVRLLLNEELVRFAEVIDAAGECDDVAAIRLYQAEFSLEAVR
Ga0318551_1087957023300031896SoilADLIHRIRLLLDEELVRFAEVIESAGPCDDVAAIRLYQAEYSLEAVR
Ga0318520_1083021523300031897SoilAGLIHRVRLLLDEELLRFVEVIESAGPCEDVAAIRLYQAEYSLEAVR
Ga0308175_10273961323300031938SoilAKARTDLADRVRLLLDEELVRFVEVIDAAGDCDDVAAIRLYQAEFSLEAVR
Ga0310916_1172965023300031942SoilIHRLRLLLDEELVRFVEVIESAGPCDDVAAIRLYQAEYSLEAVR
Ga0310910_1153936623300031946SoilRADLYERVRLLLNEELVRFVEVIDAAGECDDIAAIRLYQAEYSLEAVR
Ga0306926_1013545933300031954SoilDEELDRFVEVIESAGPCDDVAAIRLYQAEYSLEAVR
Ga0306922_1178333313300032001SoilLDEELVRFVEVIEAAGPCDDVAAIRLYQAEFSLEAVR
Ga0318514_1019598723300032066SoilDLIHRVRLLLDEELVRFVEVIESAGPCDDVAAIRLYQAEYSLEAVR
Ga0318524_1045197013300032067SoilLDEELVRFVEVLDAAGACDDVAAIRLYQAEFSLEAVR
Ga0308173_1027380023300032074SoilGEELLNGLLARARADLSDRVRLLLDEELVRFVEVIDAAGACDDVAAIRLYQAEFSLEAVR
Ga0306924_1251213913300032076SoilDRVRLLLEEELVRFVEVLDAAGECDDVAAIRLYQAEFSLEAVR
Ga0335085_1004837113300032770SoilNEELVRFVEVIDAAGECDDTAAIRLYQAEYSLEAVR
Ga0335079_1086538723300032783SoilRADLYERVRLLLNEELVRFVEVIDAAGECDDTAAIRLYQAEYSLEAVR
Ga0335074_1119087613300032895SoilMLTGILARARADLIGRVRLLLDEEMVRFVEVIEAAGPCEDVAAIRLYQAEYSLEAVR
Ga0335083_1032584523300032954SoilERVRLLLNEELVRFVEVIDAAGECDDTAAIRLYQAEYSLEAVR
Ga0335077_1099602223300033158SoilILARARADLLDRIRLLLDEELLRFVEVIDAAGPCDDVAAIRLYQAEFSLEAVR
Ga0335077_1106817923300033158SoilDRVRLLLDEELVRFVEVLDAAGDCDDVAAIRLYQAEFSLEAVR
Ga0310914_1074879923300033289SoilEEMVRFVEVIESAGPCHDVAAIRLYQAEYSLEAVR
Ga0318519_1024717613300033290SoilRVRLLLDEELVRFVEVIESAGPCDDVAAIRLYQAEYSLEAVR


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