Basic Information | |
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Family ID | F059153 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 134 |
Average Sequence Length | 61 residues |
Representative Sequence | MVDHVVQKIVDKQQKLRALRHARERVRQLERELSGEPAKREQPPHLPEFLRQDIPLRVS |
Number of Associated Samples | 105 |
Number of Associated Scaffolds | 134 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 77.61 % |
% of genes near scaffold ends (potentially truncated) | 14.93 % |
% of genes from short scaffolds (< 2000 bps) | 79.10 % |
Associated GOLD sequencing projects | 96 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.45 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (60.448 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (21.642 % of family members) |
Environment Ontology (ENVO) | Unclassified (47.761 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (46.269 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 42.53% β-sheet: 0.00% Coil/Unstructured: 57.47% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.45 |
Powered by PDBe Molstar |
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Pfam ID | Name | % Frequency in 134 Family Scaffolds |
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PF01734 | Patatin | 38.06 |
PF01694 | Rhomboid | 4.48 |
PF03466 | LysR_substrate | 2.24 |
PF02678 | Pirin | 1.49 |
PF10091 | Glycoamylase | 0.75 |
PF00106 | adh_short | 0.75 |
PF03279 | Lip_A_acyltrans | 0.75 |
PF13561 | adh_short_C2 | 0.75 |
PF06314 | ADC | 0.75 |
PF02781 | G6PD_C | 0.75 |
PF12536 | DUF3734 | 0.75 |
PF13533 | Biotin_lipoyl_2 | 0.75 |
PF00282 | Pyridoxal_deC | 0.75 |
PF02775 | TPP_enzyme_C | 0.75 |
PF12833 | HTH_18 | 0.75 |
PF02518 | HATPase_c | 0.75 |
COG ID | Name | Functional Category | % Frequency in 134 Family Scaffolds |
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COG1752 | Predicted acylesterase/phospholipase RssA, containd patatin domain | General function prediction only [R] | 38.06 |
COG3621 | Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR | General function prediction only [R] | 38.06 |
COG4667 | Predicted phospholipase, patatin/cPLA2 family | Lipid transport and metabolism [I] | 38.06 |
COG0705 | Membrane-associated serine protease, rhomboid family | Posttranslational modification, protein turnover, chaperones [O] | 4.48 |
COG1741 | Redox-sensitive bicupin YhaK, pirin superfamily | General function prediction only [R] | 1.49 |
COG0076 | Glutamate or tyrosine decarboxylase or a related PLP-dependent protein | Amino acid transport and metabolism [E] | 0.75 |
COG0364 | Glucose-6-phosphate 1-dehydrogenase | Carbohydrate transport and metabolism [G] | 0.75 |
COG1560 | Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis) | Lipid transport and metabolism [I] | 0.75 |
COG4261 | Predicted acyltransferase, LPLAT superfamily | General function prediction only [R] | 0.75 |
COG4689 | Acetoacetate decarboxylase | Secondary metabolites biosynthesis, transport and catabolism [Q] | 0.75 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 60.45 % |
Unclassified | root | N/A | 39.55 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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3300000364|INPhiseqgaiiFebDRAFT_105889846 | Not Available | 987 | Open in IMG/M |
3300000364|INPhiseqgaiiFebDRAFT_105889859 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium | 3370 | Open in IMG/M |
3300001661|JGI12053J15887_10583295 | Not Available | 532 | Open in IMG/M |
3300002245|JGIcombinedJ26739_100196194 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 1909 | Open in IMG/M |
3300004082|Ga0062384_100239459 | All Organisms → cellular organisms → Bacteria | 1094 | Open in IMG/M |
3300004091|Ga0062387_100205352 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 1193 | Open in IMG/M |
3300004102|Ga0058888_1338942 | Not Available | 724 | Open in IMG/M |
3300004631|Ga0058899_11168251 | Not Available | 669 | Open in IMG/M |
3300004633|Ga0066395_10088289 | All Organisms → cellular organisms → Bacteria | 1468 | Open in IMG/M |
3300005176|Ga0066679_10131791 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 1550 | Open in IMG/M |
3300005332|Ga0066388_101349056 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 1234 | Open in IMG/M |
3300005355|Ga0070671_101023085 | Not Available | 724 | Open in IMG/M |
3300005434|Ga0070709_10694479 | Not Available | 791 | Open in IMG/M |
3300005436|Ga0070713_100286043 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 1514 | Open in IMG/M |
3300005436|Ga0070713_100551963 | Not Available | 1091 | Open in IMG/M |
3300005437|Ga0070710_10152136 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 1428 | Open in IMG/M |
3300005468|Ga0070707_100821470 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 893 | Open in IMG/M |
3300005526|Ga0073909_10509251 | Not Available | 583 | Open in IMG/M |
3300005538|Ga0070731_10277082 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 1113 | Open in IMG/M |
3300005545|Ga0070695_100531569 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 914 | Open in IMG/M |
3300005602|Ga0070762_10338825 | Not Available | 956 | Open in IMG/M |
3300005764|Ga0066903_106106308 | Not Available | 630 | Open in IMG/M |
3300006176|Ga0070765_101162362 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 729 | Open in IMG/M |
3300006237|Ga0097621_101134743 | Not Available | 735 | Open in IMG/M |
3300006358|Ga0068871_100035514 | All Organisms → cellular organisms → Bacteria | 3962 | Open in IMG/M |
3300006871|Ga0075434_100212360 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 1955 | Open in IMG/M |
3300007788|Ga0099795_10000525 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 7210 | Open in IMG/M |
3300009792|Ga0126374_10004887 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 4644 | Open in IMG/M |
3300010048|Ga0126373_12430133 | Not Available | 583 | Open in IMG/M |
3300010366|Ga0126379_10407687 | All Organisms → cellular organisms → Bacteria | 1409 | Open in IMG/M |
3300010398|Ga0126383_11591417 | Not Available | 743 | Open in IMG/M |
3300010401|Ga0134121_10051183 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 3385 | Open in IMG/M |
3300011120|Ga0150983_11212283 | Not Available | 763 | Open in IMG/M |
3300011120|Ga0150983_11752739 | Not Available | 1051 | Open in IMG/M |
3300011120|Ga0150983_12809373 | Not Available | 570 | Open in IMG/M |
3300012203|Ga0137399_10048644 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 3063 | Open in IMG/M |
3300012361|Ga0137360_10179400 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 1701 | Open in IMG/M |
3300012361|Ga0137360_10925064 | Not Available | 752 | Open in IMG/M |
3300012362|Ga0137361_10413560 | Not Available | 1239 | Open in IMG/M |
3300012582|Ga0137358_10314954 | Not Available | 1062 | Open in IMG/M |
3300012582|Ga0137358_10652737 | Not Available | 704 | Open in IMG/M |
3300012917|Ga0137395_11165156 | Not Available | 542 | Open in IMG/M |
3300012922|Ga0137394_10156116 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 1943 | Open in IMG/M |
3300012923|Ga0137359_10024824 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 5104 | Open in IMG/M |
3300012923|Ga0137359_10885308 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 770 | Open in IMG/M |
3300012927|Ga0137416_12138399 | Not Available | 514 | Open in IMG/M |
3300012929|Ga0137404_10307011 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 1378 | Open in IMG/M |
3300012930|Ga0137407_10038082 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 3816 | Open in IMG/M |
3300012971|Ga0126369_10037916 | All Organisms → cellular organisms → Bacteria | 4022 | Open in IMG/M |
3300014969|Ga0157376_10067128 | All Organisms → cellular organisms → Bacteria | 3033 | Open in IMG/M |
3300015054|Ga0137420_1104731 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 2777 | Open in IMG/M |
3300015054|Ga0137420_1382754 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 1670 | Open in IMG/M |
3300015371|Ga0132258_12292444 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 1354 | Open in IMG/M |
3300015373|Ga0132257_104580180 | Not Available | 503 | Open in IMG/M |
3300015374|Ga0132255_100203470 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium | 2802 | Open in IMG/M |
3300020199|Ga0179592_10026204 | All Organisms → cellular organisms → Bacteria | 2615 | Open in IMG/M |
3300020199|Ga0179592_10138653 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 1114 | Open in IMG/M |
3300020579|Ga0210407_10023233 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 4609 | Open in IMG/M |
3300020579|Ga0210407_10136620 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 1883 | Open in IMG/M |
3300020581|Ga0210399_10001972 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 15934 | Open in IMG/M |
3300020581|Ga0210399_10443376 | Not Available | 1082 | Open in IMG/M |
3300020583|Ga0210401_10326523 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1395 | Open in IMG/M |
3300020583|Ga0210401_10535606 | Not Available | 1033 | Open in IMG/M |
3300021086|Ga0179596_10113439 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 1248 | Open in IMG/M |
3300021088|Ga0210404_10179565 | Not Available | 1125 | Open in IMG/M |
3300021180|Ga0210396_10170902 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 1948 | Open in IMG/M |
3300021406|Ga0210386_10084741 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium | 2575 | Open in IMG/M |
3300021407|Ga0210383_10059107 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 3199 | Open in IMG/M |
3300021407|Ga0210383_10316010 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 1344 | Open in IMG/M |
3300021420|Ga0210394_10000854 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 55686 | Open in IMG/M |
3300021432|Ga0210384_10225377 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 1687 | Open in IMG/M |
3300021478|Ga0210402_10883168 | Not Available | 820 | Open in IMG/M |
3300021478|Ga0210402_11598409 | Not Available | 579 | Open in IMG/M |
3300021559|Ga0210409_10480715 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 1105 | Open in IMG/M |
3300021560|Ga0126371_10221371 | All Organisms → cellular organisms → Bacteria | 1997 | Open in IMG/M |
3300022507|Ga0222729_1027433 | Not Available | 706 | Open in IMG/M |
3300022532|Ga0242655_10012070 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 1685 | Open in IMG/M |
3300022533|Ga0242662_10169560 | Not Available | 671 | Open in IMG/M |
3300022722|Ga0242657_1088778 | Not Available | 745 | Open in IMG/M |
3300022722|Ga0242657_1219063 | Not Available | 534 | Open in IMG/M |
3300022724|Ga0242665_10061583 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 1027 | Open in IMG/M |
3300022726|Ga0242654_10322897 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 574 | Open in IMG/M |
3300024330|Ga0137417_1422567 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 2184 | Open in IMG/M |
3300025915|Ga0207693_10118083 | Not Available | 2083 | Open in IMG/M |
3300025922|Ga0207646_10492418 | All Organisms → cellular organisms → Bacteria | 1105 | Open in IMG/M |
3300026304|Ga0209240_1216398 | Not Available | 580 | Open in IMG/M |
3300026318|Ga0209471_1063818 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 1668 | Open in IMG/M |
3300026557|Ga0179587_10475903 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 818 | Open in IMG/M |
3300027297|Ga0208241_1050303 | Not Available | 660 | Open in IMG/M |
3300027371|Ga0209418_1054279 | Not Available | 713 | Open in IMG/M |
3300027376|Ga0209004_1043777 | Not Available | 747 | Open in IMG/M |
3300027610|Ga0209528_1136050 | Not Available | 539 | Open in IMG/M |
3300027829|Ga0209773_10038097 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 1924 | Open in IMG/M |
3300028047|Ga0209526_10444969 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 853 | Open in IMG/M |
3300028536|Ga0137415_10001625 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 22268 | Open in IMG/M |
3300028906|Ga0308309_11858945 | Not Available | 508 | Open in IMG/M |
3300029636|Ga0222749_10295882 | Not Available | 836 | Open in IMG/M |
3300030730|Ga0307482_1232036 | Not Available | 573 | Open in IMG/M |
3300030730|Ga0307482_1324300 | Not Available | 501 | Open in IMG/M |
3300030939|Ga0138303_1321508 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 690 | Open in IMG/M |
3300031057|Ga0170834_103142275 | Not Available | 1060 | Open in IMG/M |
3300031543|Ga0318516_10019971 | All Organisms → cellular organisms → Bacteria | 3408 | Open in IMG/M |
3300031545|Ga0318541_10325081 | All Organisms → cellular organisms → Bacteria | 858 | Open in IMG/M |
3300031590|Ga0307483_1032957 | Not Available | 550 | Open in IMG/M |
3300031715|Ga0307476_10000347 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 38946 | Open in IMG/M |
3300031715|Ga0307476_10039497 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 3177 | Open in IMG/M |
3300031715|Ga0307476_10222041 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 1375 | Open in IMG/M |
3300031715|Ga0307476_10433188 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 972 | Open in IMG/M |
3300031715|Ga0307476_11284369 | Not Available | 534 | Open in IMG/M |
3300031718|Ga0307474_10097529 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 2196 | Open in IMG/M |
3300031720|Ga0307469_10098673 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 2043 | Open in IMG/M |
3300031720|Ga0307469_10467805 | Not Available | 1096 | Open in IMG/M |
3300031723|Ga0318493_10591381 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium | 618 | Open in IMG/M |
3300031740|Ga0307468_100280102 | Not Available | 1196 | Open in IMG/M |
3300031740|Ga0307468_101888418 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 568 | Open in IMG/M |
3300031753|Ga0307477_10001277 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 21781 | Open in IMG/M |
3300031753|Ga0307477_10114979 | All Organisms → cellular organisms → Bacteria | 1873 | Open in IMG/M |
3300031753|Ga0307477_10277875 | Not Available | 1158 | Open in IMG/M |
3300031754|Ga0307475_10188438 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 1647 | Open in IMG/M |
3300031819|Ga0318568_10589244 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium | 693 | Open in IMG/M |
3300031820|Ga0307473_10034213 | All Organisms → cellular organisms → Bacteria | 2251 | Open in IMG/M |
3300031820|Ga0307473_10533742 | Not Available | 798 | Open in IMG/M |
3300031820|Ga0307473_10588730 | Not Available | 766 | Open in IMG/M |
3300031823|Ga0307478_10261649 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 1408 | Open in IMG/M |
3300031823|Ga0307478_11229837 | Not Available | 623 | Open in IMG/M |
3300031879|Ga0306919_10604279 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 846 | Open in IMG/M |
3300031962|Ga0307479_12129932 | Not Available | 508 | Open in IMG/M |
3300032076|Ga0306924_11900345 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 617 | Open in IMG/M |
3300032174|Ga0307470_10292863 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 1100 | Open in IMG/M |
3300032180|Ga0307471_101073674 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 971 | Open in IMG/M |
3300032180|Ga0307471_101803707 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 763 | Open in IMG/M |
3300032180|Ga0307471_102746432 | Not Available | 625 | Open in IMG/M |
3300032205|Ga0307472_100746935 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 886 | Open in IMG/M |
3300032261|Ga0306920_101899078 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 837 | Open in IMG/M |
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Habitat | Taxonomy | Distribution |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 21.64% |
Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 20.90% |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 16.42% |
Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 8.96% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 5.97% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 4.48% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 2.99% |
Bog Forest Soil | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil | 2.24% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 2.24% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 2.24% |
Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil | 2.24% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 2.24% |
Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 1.49% |
Miscanthus Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere | 1.49% |
Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 0.75% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 0.75% |
Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 0.75% |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 0.75% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.75% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 0.75% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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3300000364 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
3300001661 | Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly) | Environmental | Open in IMG/M |
3300002245 | Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027) | Environmental | Open in IMG/M |
3300004082 | Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3 | Environmental | Open in IMG/M |
3300004091 | Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3 | Environmental | Open in IMG/M |
3300004102 | Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF212 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300004631 | Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300004633 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio | Environmental | Open in IMG/M |
3300005176 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 | Environmental | Open in IMG/M |
3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Host-Associated | Open in IMG/M |
3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Environmental | Open in IMG/M |
3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Environmental | Open in IMG/M |
3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Environmental | Open in IMG/M |
3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Environmental | Open in IMG/M |
3300005526 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 | Environmental | Open in IMG/M |
3300005538 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 | Environmental | Open in IMG/M |
3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Environmental | Open in IMG/M |
3300005602 | Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 | Environmental | Open in IMG/M |
3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
3300006176 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 | Environmental | Open in IMG/M |
3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) | Host-Associated | Open in IMG/M |
3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Host-Associated | Open in IMG/M |
3300006871 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Host-Associated | Open in IMG/M |
3300007788 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 | Environmental | Open in IMG/M |
3300009792 | Tropical forest soil microbial communities from Panama - MetaG Plot_12 | Environmental | Open in IMG/M |
3300010048 | Tropical forest soil microbial communities from Panama - MetaG Plot_11 | Environmental | Open in IMG/M |
3300010366 | Tropical forest soil microbial communities from Panama - MetaG Plot_24 | Environmental | Open in IMG/M |
3300010398 | Tropical forest soil microbial communities from Panama - MetaG Plot_35 | Environmental | Open in IMG/M |
3300010401 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1 | Environmental | Open in IMG/M |
3300011120 | Combined assembly of Microbial Forest Soil metaT | Environmental | Open in IMG/M |
3300012203 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG | Environmental | Open in IMG/M |
3300012361 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG | Environmental | Open in IMG/M |
3300012362 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG | Environmental | Open in IMG/M |
3300012582 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG | Environmental | Open in IMG/M |
3300012917 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG | Environmental | Open in IMG/M |
3300012922 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG | Environmental | Open in IMG/M |
3300012923 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG | Environmental | Open in IMG/M |
3300012927 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300012929 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300012930 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300012971 | Tropical forest soil microbial communities from Panama - MetaG Plot_1 | Environmental | Open in IMG/M |
3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Host-Associated | Open in IMG/M |
3300015054 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction) | Environmental | Open in IMG/M |
3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
3300015373 | Combined assembly of cpr5 rhizosphere | Host-Associated | Open in IMG/M |
3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
3300020199 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300020579 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M | Environmental | Open in IMG/M |
3300020581 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M | Environmental | Open in IMG/M |
3300020583 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M | Environmental | Open in IMG/M |
3300021086 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300021088 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M | Environmental | Open in IMG/M |
3300021180 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O | Environmental | Open in IMG/M |
3300021406 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O | Environmental | Open in IMG/M |
3300021407 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O | Environmental | Open in IMG/M |
3300021420 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M | Environmental | Open in IMG/M |
3300021432 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M | Environmental | Open in IMG/M |
3300021478 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M | Environmental | Open in IMG/M |
3300021559 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M | Environmental | Open in IMG/M |
3300021560 | Tropical forest soil microbial communities from Panama - MetaG Plot_4 | Environmental | Open in IMG/M |
3300022507 | Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-M (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300022532 | Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300022533 | Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300022722 | Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300022724 | Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300022726 | Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300024330 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction) | Environmental | Open in IMG/M |
3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) | Environmental | Open in IMG/M |
3300026304 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes) | Environmental | Open in IMG/M |
3300026318 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes) | Environmental | Open in IMG/M |
3300026557 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal | Environmental | Open in IMG/M |
3300027297 | Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF047 (SPAdes) | Environmental | Open in IMG/M |
3300027371 | Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes) | Environmental | Open in IMG/M |
3300027376 | Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M1 (SPAdes) | Environmental | Open in IMG/M |
3300027610 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes) | Environmental | Open in IMG/M |
3300027829 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes) | Environmental | Open in IMG/M |
3300028047 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes) | Environmental | Open in IMG/M |
3300028536 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
3300028906 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2) | Environmental | Open in IMG/M |
3300029636 | Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300030730 | Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300030939 | Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A9_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2) | Environmental | Open in IMG/M |
3300031057 | Oak Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
3300031543 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20 | Environmental | Open in IMG/M |
3300031545 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26 | Environmental | Open in IMG/M |
3300031590 | Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031715 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05 | Environmental | Open in IMG/M |
3300031718 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 | Environmental | Open in IMG/M |
3300031720 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515 | Environmental | Open in IMG/M |
3300031723 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23 | Environmental | Open in IMG/M |
3300031740 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05 | Environmental | Open in IMG/M |
3300031753 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515 | Environmental | Open in IMG/M |
3300031754 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515 | Environmental | Open in IMG/M |
3300031819 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21 | Environmental | Open in IMG/M |
3300031820 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515 | Environmental | Open in IMG/M |
3300031823 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05 | Environmental | Open in IMG/M |
3300031879 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2) | Environmental | Open in IMG/M |
3300031962 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515 | Environmental | Open in IMG/M |
3300032076 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2) | Environmental | Open in IMG/M |
3300032174 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05 | Environmental | Open in IMG/M |
3300032180 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515 | Environmental | Open in IMG/M |
3300032205 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05 | Environmental | Open in IMG/M |
3300032261 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2) | Environmental | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
INPhiseqgaiiFebDRAFT_1058898462 | 3300000364 | Soil | MVDHEVEKIIDKLQKLRALRQARERVRQLERELNGEPAKPESAAHLPEFLRQHSPLRXA* |
INPhiseqgaiiFebDRAFT_1058898591 | 3300000364 | Soil | MVDHEVEKIVDKLQKLRALRQARERVRQLERELNGEQAKPESPPHLPEFLRQQSPLRVA* |
JGI12053J15887_105832952 | 3300001661 | Forest Soil | MVDHEVQKIVDKLQKLRALRHARERVRQLERELSGEPAKREEPPRLPEFLRQHTPLQVS* |
JGIcombinedJ26739_1001961942 | 3300002245 | Forest Soil | MVDHEVQKIVDKQQKLRALRHARERVRQLEREASGEPAKREEPPHLPEFLRQRIFPSRLRSEDVTR* |
Ga0062384_1002394592 | 3300004082 | Bog Forest Soil | MADHEVERIVDKLQTLRAPRRARERVRQLERELRGEPAKPESASRLPEFLKQHDPLRVAK |
Ga0062387_1002053522 | 3300004091 | Bog Forest Soil | MGDSQVDKIVNKLHKLTALRRARERVRQLERELNGEPAKPEAPPHLPEFLRQHGPSRVA* |
Ga0058888_13389422 | 3300004102 | Forest Soil | MVDREVEKLVDKLQKLRALRCAREWVRQLEREVNGEPAKPESAPLLTKLLKQHGPLRVAK |
Ga0058899_111682512 | 3300004631 | Forest Soil | MGDSQLDKIVDKLQKLRALRRARERVRQLERELNGAPAKPETPPHLPEFLRQRGPFRVA* |
Ga0066395_100882892 | 3300004633 | Tropical Forest Soil | MDSEVRKIVDKLQKLNALRHARERVRQLEMELSGEPARTETPPHVPEFLRQRITARVS* |
Ga0066679_101317912 | 3300005176 | Soil | MVDHEVQMIVDKQQKLRALRHARERVRQLERELRGEPAKREEPPRLPEFLRQHIPLQVS* |
Ga0066388_1013490561 | 3300005332 | Tropical Forest Soil | MDSDVRKIVDKLQKLNALRHARERVRQLEMELSGEPARTETPPHVPEFLRQRITARVS* |
Ga0070671_1010230853 | 3300005355 | Switchgrass Rhizosphere | MVDHEVGKIVEKLQKLRALRQARERVRQLERELNGEQAKPESPPHLPEFLRQ |
Ga0070709_106944792 | 3300005434 | Corn, Switchgrass And Miscanthus Rhizosphere | MVDHEVGKIVEKLQKLRALRQARERVRQLERELNGEQAKPESPPHLPEFLRQQSPLRVA* |
Ga0070713_1002860431 | 3300005436 | Corn, Switchgrass And Miscanthus Rhizosphere | KIVEKLQKLRALRQARERVRQLERELNGEQAKPESPPHLPEFLRQQSPLRVA* |
Ga0070713_1005519633 | 3300005436 | Corn, Switchgrass And Miscanthus Rhizosphere | MVDQEVEKIVEKLQKLRALRQARERVRQLERELNGEQAKPESPPHLPEFLRQQGPLRVA* |
Ga0070710_101521362 | 3300005437 | Corn, Switchgrass And Miscanthus Rhizosphere | MVDHELRKIVDKQEKLLALRHARERVIQLERELSGEPAKREEPPHLPEFLRQDLPLRASWEDVTR* |
Ga0070707_1008214701 | 3300005468 | Corn, Switchgrass And Miscanthus Rhizosphere | MVDHEVEKIIDKLQKLRALRQARERVRQLERELNGERAKPESSTHLPEFLRPHSPLRVA* |
Ga0073909_105092511 | 3300005526 | Surface Soil | MVDHEVQKIVDKHQKLSTLRQGRARVRRLERELSGKPAQREELPHLHEFLRQDLPRQVLEDLTR* |
Ga0070731_102770822 | 3300005538 | Surface Soil | MVDREVEKIVDKLHKLRALRRARERVRQLERELNGAPAKPESAPHLPEFLRQHSPLRVAK |
Ga0070695_1005315692 | 3300005545 | Corn, Switchgrass And Miscanthus Rhizosphere | SAMVDHEVGKIVEKLQKLRALRQARERVRQLERELNGEQAKPESPPHLPEFLRQQSPLRVA* |
Ga0070762_103388252 | 3300005602 | Soil | MVDREVEKLVDKLQKLRALRCAREWVRQLERDVNGEPAKPESAPLLTKLLKQHGPLRVAK |
Ga0066903_1061063082 | 3300005764 | Tropical Forest Soil | VMDSEVRKIVDKLQKLNALRHARERVRQLEMELSGEPARTDSPPHVPEFLRQRITGRVS* |
Ga0070765_1011623622 | 3300006176 | Soil | TWHGTEELFMGDSQVDKIVDKLHKLRALRHARERVRQLERELNGEPVKPEAPPHLPEFLRQHGPFRVA* |
Ga0097621_1011347432 | 3300006237 | Miscanthus Rhizosphere | MVDHEVQKIVDKQQKLSTLRQGRARVRQLERELSGKPAQREELPHLHEFLRQDLPRQALEDLTR* |
Ga0068871_1000355146 | 3300006358 | Miscanthus Rhizosphere | MVDHEVQQIVDKQQKLSTLRQGRARVRQLERELSGKPAQGEELPHLHEFLRQDLPRQALEDLTR* |
Ga0075434_1002123602 | 3300006871 | Populus Rhizosphere | MVDHEVEKIVEKLQKLRALRQARERVRQLERELNGEQAKPESPPHLPEFLRQQSPLRVA* |
Ga0099795_100005254 | 3300007788 | Vadose Zone Soil | MVDHEVQMIVDKQQKLRALRHARERVRQLERELSGGPAKREEPPRLPEFLRQDIPLQVS* |
Ga0126374_100048871 | 3300009792 | Tropical Forest Soil | MDSEVRKIVDKLQKLNALRQARERVRQLEMELSGEPARTETPPHVPEFLRQHTTARVS* |
Ga0126373_124301331 | 3300010048 | Tropical Forest Soil | MDSEVRKIVDKLQKLNALRHARERVRQLELELSGEPARTDTPPHVPEFLRQRITGRVS* |
Ga0126379_104076871 | 3300010366 | Tropical Forest Soil | MDSEVRKIVDKLQKLNALRHARERVRQLEMELSGEPARTETPPHVPEFLRQHTTARVS* |
Ga0126383_115914172 | 3300010398 | Tropical Forest Soil | MDSEVRKIVDKLQKLNALRHARERVRQLEMELSGEPARTDSPPHVPEFLRQRITGRVS* |
Ga0134121_100511832 | 3300010401 | Terrestrial Soil | MVDHEVGKIVEKLQKLRALRQARERVRQLERELNGEQAKPESPPHLPEFLRQQSPLRIA* |
Ga0150983_112122832 | 3300011120 | Forest Soil | MDAAEGGSAMVDHEVQKIVGKQQKLRALRHARERVRQLERELSGEPAKREEPPHLPEFLRQDLALQVS* |
Ga0150983_117527392 | 3300011120 | Forest Soil | MADHEVEKVVDKLQKLRALRHARERVRQLERELNGELAKPEGAPHLPEFLKQHGPLRVAK |
Ga0150983_128093732 | 3300011120 | Forest Soil | MVDHEVEKIIDKLQKLRALRQARERVRQLERELNGEPAKPESPTHLPEFLLPHSPLRVA* |
Ga0137399_100486443 | 3300012203 | Vadose Zone Soil | MDAGGGGSAMVDHVVQKIVDKQQKLRALRHARERVRQLERELSGEPAKREQPPHLPEFLRQDIPLRVS* |
Ga0137360_101794002 | 3300012361 | Vadose Zone Soil | MDAGEGGSAMVDHEVQKIVDKLQKLRALRHARERVRQLERELSGEPGKREEPPRLPEFLRQGIPLQVS* |
Ga0137360_109250642 | 3300012361 | Vadose Zone Soil | MDAGEGGSAMVDHVVQKIVDKQQKLRALRHARERVRQLERELSGEPAKREEPPHLPEFL |
Ga0137361_104135601 | 3300012362 | Vadose Zone Soil | MDAGEGGSAMVDHVVQKIVDKQQKLRALRHARKRVRQLERELSGEPAKSEEPPHLPEFLRQDIPLRVS* |
Ga0137358_103149543 | 3300012582 | Vadose Zone Soil | MDAGGGGSAMVDHVVQKIVDKQQKLRALRHARERVRQLERELSGEPAKREEPPHLPEFLRQDIPLQVS* |
Ga0137358_106527372 | 3300012582 | Vadose Zone Soil | MDAGEGGSAMVDREVQKIVDKQQKLRALRHARERVRQLERELSGEPAKREQPPHLPEFLRQDIPLRVS* |
Ga0137395_111651562 | 3300012917 | Vadose Zone Soil | MDAGEGGSAMVDREVQKIVDKQQKLRALHHARKRVRQLERELSGEPAKREEPVRLPEFLRQDIPLQVS* |
Ga0137394_101561162 | 3300012922 | Vadose Zone Soil | MDAGEGGSAMVDHVVQKIVDKQQKLRALRHARERVRQLERELSGEPAKREQPPHLPEFLRQDIPLRVS* |
Ga0137359_100248243 | 3300012923 | Vadose Zone Soil | MDAGEGGSAMVDHEVQMIVDKQQKLRALRHARERVRQLERELSGEPAKREEPPRLPEFLRQDIPLQVS* |
Ga0137359_108853082 | 3300012923 | Vadose Zone Soil | EVQMIVDKQQKLRALRHARERVRQLERELSGEPAKREQPPHLPEFLRQDIPLRVS* |
Ga0137416_121383991 | 3300012927 | Vadose Zone Soil | MDAGEGGSAMVDHEVQMIVDKQQKLRALRHARERVRQLERELSGEPAKVEELPRLPEFLRQDISLRVS* |
Ga0137404_103070111 | 3300012929 | Vadose Zone Soil | MVDHEVQMIVDKQQKLRALRHARERVRQLERELSGEPAKREQPPHLPEFLRQDIPLRVS* |
Ga0137407_100380823 | 3300012930 | Vadose Zone Soil | MDAGGGGSAMVDHVVQKIVDKQQKLRALRHARERVRQLERELSGEPAKSEEPPHLPEFLRQDIPLRVS* |
Ga0126369_100379164 | 3300012971 | Tropical Forest Soil | MDSDVRKIGDKLKKLNALRHARERVRQLEMELSGEPARTDSPPHVPEFLRQRITGRVS* |
Ga0157376_100671287 | 3300014969 | Miscanthus Rhizosphere | MVDHEVQQIVDKQQKLSTLRQGRARVRQLERELSGKPAQREELPHLHEFLRQDLPRQALEDLTR* |
Ga0137420_11047312 | 3300015054 | Vadose Zone Soil | MDAGGGGSAMVDHVVQKIVDKQQKLRALRHARERVRQLERELSGEPAKREQPPHLPEFLRQDISLRVS* |
Ga0137420_13827542 | 3300015054 | Vadose Zone Soil | MDAGGGGSAMVDHVVQKIVDKQQKLRALRHARERVRQLERELSGEPAKREQPPHLPEFLRQDIPIRVS* |
Ga0132258_122924442 | 3300015371 | Arabidopsis Rhizosphere | MVDHEVEKIVEKLQKLRALRHARERVRQLERELNGEPGKPESPPHLPEFLRRQSPLRVA* |
Ga0132257_1045801802 | 3300015373 | Arabidopsis Rhizosphere | EVEKIAEKLQKLRALRHARERVRQLERELNGEPGKPESPPHLPEFLRRQSPLRVA* |
Ga0132255_1002034701 | 3300015374 | Arabidopsis Rhizosphere | MVDHEVGKIVEKLQKLRALRHARERVRQLERELNGEPGKPESPPHLPEFLRRQSPLRVA* |
Ga0179592_100262042 | 3300020199 | Vadose Zone Soil | MVDHEVQMIVDKQQKLRALRHARERVRQLERELSGGPAKREEPPRLPEFLRQDIPLQVS |
Ga0179592_101386532 | 3300020199 | Vadose Zone Soil | MVDREVQKIVDKLQKLRALRHARERVRQLERELSGEPAKREEPLRLPEFLRQDIPLQVS |
Ga0210407_100232334 | 3300020579 | Soil | MVDHELRTIVDKQEKLRALRHARERVRQLERELSGEPAKRKEPPHLPEFLRQDLPLQASWEDVTP |
Ga0210407_101366202 | 3300020579 | Soil | MVDHEVEKIIDKLQKLRALRQARERVRQLERELNGEPAKPESPTHLPEFLLPHSPLRVA |
Ga0210399_100019723 | 3300020581 | Soil | MVDSRVEQIIDKLQKLRALRFARAGVRQLERELRVERAGAEEPPSIPEFLRQRRYLQAR |
Ga0210399_104433762 | 3300020581 | Soil | MVSHEVEKLVDKLQTLRALRCAREWVRQLERELNGEPAKPEGVPHLTEFLQEHGPLWVAK |
Ga0210401_103265233 | 3300020583 | Soil | MVDDEDDEVEKLVDKLQKLRALRCARERVRQLERELNGEPAKPESLPHLTEFLKQHGPLWVAK |
Ga0210401_105356062 | 3300020583 | Soil | MVDDEVQKLVDKLQKLRALRCARERVRQLERELNREPAKPEAVPHLTEFLQEHGPLWVAK |
Ga0179596_101134392 | 3300021086 | Vadose Zone Soil | MVDHVVQKIVDKQQKLRALRHARERVRQLERELSGEPAKSEEPPHLPEFLRQDIPLRVS |
Ga0210404_101795653 | 3300021088 | Soil | MVDHEVEKIIDKLQKLRALRQARERVRQLERELNGEPAKPESPTHLPEFLLPHSPIR |
Ga0210396_101709023 | 3300021180 | Soil | MVDHEVEKLVDKLQKLRALRCARERVRQLERELNGEPAKPEGVPPLTEFLQEHGPLWVAK |
Ga0210386_100847413 | 3300021406 | Soil | MVDHEVEKILDKLQKLRALRQARERVRQLERELNGEPAKPESPTHLPEFLLPHSPLRVA |
Ga0210383_100591071 | 3300021407 | Soil | MGDSQVDKIVDKLHKLRALRHARERVRQLERELNGEPVKPEAPPHLPEFLRQHGPFRVA |
Ga0210383_103160102 | 3300021407 | Soil | MVDHEVEKLVDKLQTLRALRCAREWVRQLERELNGEPAKPEGVPHLTEFLQEHGPLWVAK |
Ga0210394_1000085436 | 3300021420 | Soil | MGDSQLDKIVDKLQKLRALRRARERVRQLERELNGAPAKPETPPHLPEFLRQRGPFRVA |
Ga0210384_102253771 | 3300021432 | Soil | MVDHELRTIVDKQEKLRALRHARERVRQLERELSGEPAKRKEPPHLPEFLRQDRPLQASWEDVTR |
Ga0210402_108831682 | 3300021478 | Soil | MVDHELRTIVDKQEKLRALRQARERVMRLERELSGEPAKREEPRHLPEFLRQVLPLQASWEDVTR |
Ga0210402_115984091 | 3300021478 | Soil | MVDHELRTIVEKQEKLRALRQAREHVIRLERELSGEPAKREEPPQLPEFLRQDFALQASWEDVTR |
Ga0210409_104807152 | 3300021559 | Soil | MVDHEVQKIVDKQQKLRALRHARERVRQLERELSGEPAKREEAPRLPEFLRQDLPLQAS |
Ga0126371_102213713 | 3300021560 | Tropical Forest Soil | VMDSEVRKIVDKLQKLNALRHARERVRQLEMELSGEPARTDSPPHVPGFLRQRITGRVS |
Ga0222729_10274332 | 3300022507 | Soil | MVDHEVEKIIDKLQKLRALRQARERVRQLERELNGEPAKPESPTHLPEFLLPHSPIRVA |
Ga0242655_100120702 | 3300022532 | Soil | MVDHEVEKIVDRLQKLRALRYARERVRQLERELNGEPAKPAGAPHLTGFLEEHGPLRVAK |
Ga0242662_101695601 | 3300022533 | Soil | MVDHEVEKIVEKLQKLRALRQARERVRQLERELNGEQAKPESPPHLPEFLRQQGPLRVA |
Ga0242657_10887782 | 3300022722 | Soil | MVDHEVQKIVDKQQKLRALRHARERVRQLEREASGEPAKREEPPHLPEFLRQRIFPSRVRSEDVTR |
Ga0242657_12190632 | 3300022722 | Soil | MVDHEVEKILDKLQKLRALRQARERVRQLERELNGEPAKPEAPPHLPEFLRQRGPFRVA |
Ga0242665_100615832 | 3300022724 | Soil | MVDQEVQKIVDKQQKLRALRHARERVRQLERELSGEPAKREEAPRLPEFLRQDLPLQAS |
Ga0242654_103228972 | 3300022726 | Soil | MVDHEVEKIVEKLQKLRALRQARERVRQLERELNGEQAKPESPPHLPEFLRQQSPLRVA |
Ga0137417_14225674 | 3300024330 | Vadose Zone Soil | MVDHVVQKIVDKQQKLRALRHARERVRQLERELSGEPAKREQPPHLPEFLRQDIPSGFPSEDVTR |
Ga0207693_101180833 | 3300025915 | Corn, Switchgrass And Miscanthus Rhizosphere | MVDHELRKIVDKQEKLLALRHARERVIQLERELSGKPAQREELPHLHEFLRQDLPRQALEDLTR |
Ga0207646_104924182 | 3300025922 | Corn, Switchgrass And Miscanthus Rhizosphere | MVDHEVEKIIDKLQKLRALRQARERVRQLERELNGERAKPESSTHLPEFLRPHSPLRVA |
Ga0209240_12163982 | 3300026304 | Grasslands Soil | MVDHEVQMIVDKQQKLRALRHARERVRQLERELSGGPAKREEPPRLPEFLRQDIPL |
Ga0209471_10638182 | 3300026318 | Soil | MVDHEVQMIVDKQQKLRALRHARERVRQLERELRGEPAKREEPPRLPEFLRQHIPLQVS |
Ga0179587_104759031 | 3300026557 | Vadose Zone Soil | MVDHEVQMIVDKQQKLRALRHARERVRQLERELSGEPAKREQPPHLPEFLRQDIPLRVS |
Ga0208241_10503031 | 3300027297 | Forest Soil | MVDHEVEKIVDRLQKLRALRYARERVRQLERELNGEPAKPESLPHLTEFLKQHGPLWVAK |
Ga0209418_10542792 | 3300027371 | Forest Soil | MVDGEVQKIVDKLQKLRALRHARERVRQLERELHGEPPKPVRVPQLPEFLRQHGPFRVAK |
Ga0209004_10437771 | 3300027376 | Forest Soil | MVDHELQKILDKRHKLRALRQARERVRQLERELGGEPAKREEPAHLPEFLRQDLPLQVS |
Ga0209528_11360502 | 3300027610 | Forest Soil | MVDHEVQKIVDKQQKLRALRHARERVRQLEREASGEPAKREEPPHLPEFLRQRIFPSRLRSEDVTR |
Ga0209773_100380972 | 3300027829 | Bog Forest Soil | MGDSQVDKIVNKLHKLTALRRARERVRQLERELNGEPAKPEAPPHLPEFLRQHGPSRVA |
Ga0209526_104449692 | 3300028047 | Forest Soil | MVDHEVQKIVDKQQKLRALRHARERVRQLEREASGEPAKREEPPHLPEFLRQDLALQVS |
Ga0137415_100016258 | 3300028536 | Vadose Zone Soil | MVDHVVQKIVDKQQKLRALRHARERVRQLERELSGEPAKREQPPHLPEFLRQDIPLRVS |
Ga0308309_118589451 | 3300028906 | Soil | SSTWHGTEELFMGDSQVDKIVDKLHKLRALRHARERVRQLERELNGEPVKPEAPPHLPEFLRQHGPFRVA |
Ga0222749_102958822 | 3300029636 | Soil | MVDHELRTIVDKQEKLRALRHARERVRQLEREASGEPAKREEPPHLPEFLRQRIFPSRLRSEDVTR |
Ga0307482_12320362 | 3300030730 | Hardwood Forest Soil | MVDHVVQMIVDKQQKLRALRHARERVRQLEGELRGEPAKREEPPHLPEFLRQDLPLQVS |
Ga0307482_13243002 | 3300030730 | Hardwood Forest Soil | DHVVQKIVDKRQKLRALRHARERVRQLERELSGEPAKREEPPYLPEFLRQDVPLQVS |
Ga0138303_13215082 | 3300030939 | Soil | MVDHELRKIVDKQEKVLALRHARVRVIQLERELSGEPAKREEPPHLPEFLRQDLPLRASWEDVTR |
Ga0170834_1031422752 | 3300031057 | Forest Soil | MVDHELRTIVDKQEKLRVLRQARERVIRLERELSGEPAKREEPRHLPEFLRHDLPLQASREDVTR |
Ga0318516_100199712 | 3300031543 | Soil | MDSEVRKIVDKLQKLNALRLARERVRQLEMELSGEPARTEAPPDVPEFLRQRITARVPR |
Ga0318541_103250811 | 3300031545 | Soil | VMDSEVRKIVDKLQKLNALRLARERVRQLEMELSGEPARTEAPPDVPEFLR |
Ga0307483_10329572 | 3300031590 | Hardwood Forest Soil | MVDHVVQMIIDKQQKLRALRHARDRVRQLERELRGEPAKREEPPHLPEFLRQDLRLQVS |
Ga0307476_1000034714 | 3300031715 | Hardwood Forest Soil | MVDSKVEQIIDKLQKLRALRFARARVRQLERELRVERAGAEEPPSTPEFLRRRRYLQAR |
Ga0307476_100394974 | 3300031715 | Hardwood Forest Soil | MVDHDVEKIVDKMQKLRALRHARERVRQLERELDGAPAKPDDSPPLPEYLRQHRPLWMAK |
Ga0307476_102220411 | 3300031715 | Hardwood Forest Soil | MGDSQLDKIVDKLHKLRALRRARERVRQLERELSGEPAKPETPPHLPEFLRRHGPFRVA |
Ga0307476_104331882 | 3300031715 | Hardwood Forest Soil | MLDDDMEKIVDKLQKLRALRHARERVRQLERELNGEPAKPESPPYLPEFLRQHSPLRVV |
Ga0307476_112843691 | 3300031715 | Hardwood Forest Soil | MVDQEVDKIVAKLQKLRALRHARERVRQLERELNGEPAKPESPPHLPEFLRQRSPLRVA |
Ga0307474_100975292 | 3300031718 | Hardwood Forest Soil | MVDHDVEKIVDKMQKLRALRHARERVRQLERELDGAPAKPDDSPPLPEYLRQPRPLWMAK |
Ga0307469_100986733 | 3300031720 | Hardwood Forest Soil | MVDHEVGKIVEKLQKLRALRQARERVRQLERELNGEQAKPESPPHLPEFLRRQSPLRIA |
Ga0307469_104678052 | 3300031720 | Hardwood Forest Soil | MVDHEVQKIVDKQQKLRALHHARERVRQLERELSGEPAKREEPPHLPEFLRQDLPLQVS |
Ga0318493_105913812 | 3300031723 | Soil | VMDSEVRKIVDKLQKLNALRLARERVRQLEMELSGEPARTEAPPDVPEFLRQRITARVPR |
Ga0307468_1002801021 | 3300031740 | Hardwood Forest Soil | MVDHEVQKIVDKQQKLRALRHARERVRQLERELSGEPAKREEPPHLPEFLRQD |
Ga0307468_1018884181 | 3300031740 | Hardwood Forest Soil | AMVDHEVGKIVEKLQKLRALRQARERVRQLERELNGEQATPESPPHLPEFLRQQSPLRVA |
Ga0307477_100012775 | 3300031753 | Hardwood Forest Soil | MADHEVQKIVDKRHKLRALRHARERVRQLERELSGEPAKREERPHLPEFLRQDLPLQFRSEDVTR |
Ga0307477_101149793 | 3300031753 | Hardwood Forest Soil | MVDHVVQKIVDKRQKLRALRHARERVRQLERELSGEPAKREEPPYLPEFLRQDVPLQVS |
Ga0307477_102778752 | 3300031753 | Hardwood Forest Soil | MVDGRVEQIIDKLQKLRALRFARARVRQLERELRGERARAEEPPSIPEFLRQRRYLQAR |
Ga0307475_101884382 | 3300031754 | Hardwood Forest Soil | MVDHEVEKIVDKLQKLRALRQARERVRQLERELNGEPPKPAGPPHLPEFLRQYGPLRVAK |
Ga0318568_105892442 | 3300031819 | Soil | VMDSEVRKIVDKLQKLNALRLARERVRQLEMELSGEPARTEAPPDVPEFLRQRIT |
Ga0307473_100342134 | 3300031820 | Hardwood Forest Soil | MVDREVEKIVEKLQKLRALRHARERVRQLERELNGEQAKPESPPHLPEFLRRQSPLRVA |
Ga0307473_105337421 | 3300031820 | Hardwood Forest Soil | MVDHEVEKIIDKLQKLRALRQARERVRQLERELNGEPAKPESPTHLPEFLRPHSPL |
Ga0307473_105887302 | 3300031820 | Hardwood Forest Soil | MVDQEVEKIVDKLQKLRALRHARERVRQLERELSGAPAKPKSPSHLPEFLRQHSPLRVV |
Ga0307478_102616492 | 3300031823 | Hardwood Forest Soil | MVDHEVEKLVDKLQKLRALRCARERVRQLERELNGEPAKPEGVPPLTEFLQEHGPLWVAR |
Ga0307478_112298371 | 3300031823 | Hardwood Forest Soil | MADHEVQKIVDKRHKLRALRHARERVRQLERELSGEPAKREERPHLPEFLRQDLPLQVS |
Ga0306919_106042791 | 3300031879 | Soil | VPGEGAFGVMDSEVRKIVDKLQKLNALRLARERVRQLEMELSGEPARTEAPPDVPEFLRQRITARVPR |
Ga0307479_121299321 | 3300031962 | Hardwood Forest Soil | MVDQEVEKIVAKLQKLRALRHARERVRQLERELNGEPAKPESPPHLPEFLRQRSPLRVV |
Ga0306924_119003452 | 3300032076 | Soil | MVDTEVQKIFEKLQKLRALRLARERVRQLERELHGETPKPEGAPHLPEFLRQHTSLSSLRVAK |
Ga0307470_102928631 | 3300032174 | Hardwood Forest Soil | MVDHEVQKIVDKQQKLSTLRQGRARVRRLERELSGKPAQREELPHLHEFLRLDLPRQVLEGLTR |
Ga0307471_1010736742 | 3300032180 | Hardwood Forest Soil | MVDHEVDKIVEKLQKLRALRHARERVRQLERELNGAQAKPESPPHLPEFLRQQSPLRVA |
Ga0307471_1018037072 | 3300032180 | Hardwood Forest Soil | MVDHELRTIVDKQEKLRALRHARERVRQLERELSGEPAKRKEPPHLPEFLRQDLPLQASWEDVTR |
Ga0307471_1027464322 | 3300032180 | Hardwood Forest Soil | MVDHEVGKIVEKLQKLRALRQARERVRQLERELNGEQAKPESPPHLPEFLRRQSPRRIA |
Ga0307472_1007469352 | 3300032205 | Hardwood Forest Soil | MVDHEVGKIVEKLQKLRALRQARERVRQLERELNGEQAKPESPPHLPEFLRQHSPLRVA |
Ga0306920_1018990781 | 3300032261 | Soil | QKIFEKLQKLRALRLARERVRQLERELHGETPKPEGAPHLPEFLRQHTSLSSLRVAK |
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