NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F059148

Metagenome / Metatranscriptome Family F059148

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F059148
Family Type Metagenome / Metatranscriptome
Number of Sequences 134
Average Sequence Length 50 residues
Representative Sequence TINYEPIASVDGQGFFLEDMYLITKDGAELLTPGVPYSAEDIEAAMR
Number of Associated Samples 116
Number of Associated Scaffolds 134

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 4.48 %
% of genes near scaffold ends (potentially truncated) 91.04 %
% of genes from short scaffolds (< 2000 bps) 88.06 %
Associated GOLD sequencing projects 107
AlphaFold2 3D model prediction Yes
3D model pTM-score0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (95.522 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(20.149 % of family members)
Environment Ontology (ENVO) Unclassified
(37.313 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(65.672 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 10.67%    β-sheet: 18.67%    Coil/Unstructured: 70.67%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.48
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 134 Family Scaffolds
PF04185Phosphoesterase 4.48
PF00756Esterase 3.73
PF00501AMP-binding 3.73
PF08327AHSA1 2.24
PF00753Lactamase_B 2.24
PF12867DinB_2 1.49
PF01980TrmO 1.49
PF02371Transposase_20 1.49
PF06418CTP_synth_N 1.49
PF13432TPR_16 1.49
PF00072Response_reg 1.49
PF00296Bac_luciferase 0.75
PF04402SIMPL 0.75
PF03713DUF305 0.75
PF02321OEP 0.75
PF02517Rce1-like 0.75
PF01965DJ-1_PfpI 0.75
PF14534DUF4440 0.75
PF07719TPR_2 0.75
PF00679EFG_C 0.75
PF08974DUF1877 0.75
PF13683rve_3 0.75
PF13649Methyltransf_25 0.75
PF14329DUF4386 0.75
PF01625PMSR 0.75
PF02687FtsX 0.75
PF12850Metallophos_2 0.75
PF07883Cupin_2 0.75
PF12893Lumazine_bd_2 0.75
PF08269dCache_2 0.75
PF00118Cpn60_TCP1 0.75
PF17162DUF5118 0.75
PF00106adh_short 0.75
PF04471Mrr_cat 0.75
PF13561adh_short_C2 0.75
PF00873ACR_tran 0.75
PF03551PadR 0.75
PF07228SpoIIE 0.75
PF00578AhpC-TSA 0.75
PF01593Amino_oxidase 0.75
PF01381HTH_3 0.75
PF03544TonB_C 0.75
PF00557Peptidase_M24 0.75
PF07238PilZ 0.75
PF12770CHAT 0.75
PF04956TrbC 0.75
PF00589Phage_integrase 0.75
PF01850PIN 0.75
PF13414TPR_11 0.75

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 134 Family Scaffolds
COG3511Phospholipase CCell wall/membrane/envelope biogenesis [M] 4.48
COG0504CTP synthase (UTP-ammonia lyase)Nucleotide transport and metabolism [F] 1.49
COG3547TransposaseMobilome: prophages, transposons [X] 1.49
COG1538Outer membrane protein TolCCell wall/membrane/envelope biogenesis [M] 1.49
COG1720tRNA (Thr-GGU) A37 N6-methylaseTranslation, ribosomal structure and biogenesis [J] 1.49
COG1846DNA-binding transcriptional regulator, MarR familyTranscription [K] 0.75
COG4449Predicted protease, Abi (CAAX) familyGeneral function prediction only [R] 0.75
COG3838Type IV secretory pathway, VirB2 component (pilin)Intracellular trafficking, secretion, and vesicular transport [U] 0.75
COG3544Uncharacterized conserved protein, DUF305 familyFunction unknown [S] 0.75
COG3471Predicted secreted (periplasmic) proteinFunction unknown [S] 0.75
COG2968Uncharacterized conserved protein YggE, contains kinase-interacting SIMPL domainFunction unknown [S] 0.75
COG2859Outer membrane channel-forming protein BP26/OMP28, SIMPL familyCell wall/membrane/envelope biogenesis [M] 0.75
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 0.75
COG0225Peptide methionine sulfoxide reductase MsrAPosttranslational modification, protein turnover, chaperones [O] 0.75
COG1733DNA-binding transcriptional regulator, HxlR familyTranscription [K] 0.75
COG1695DNA-binding transcriptional regulator, PadR familyTranscription [K] 0.75
COG1266Membrane protease YdiL, CAAX protease familyPosttranslational modification, protein turnover, chaperones [O] 0.75
COG0810Periplasmic protein TonB, links inner and outer membranesCell wall/membrane/envelope biogenesis [M] 0.75
COG0459Chaperonin GroEL (HSP60 family)Posttranslational modification, protein turnover, chaperones [O] 0.75

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms95.52 %
UnclassifiedrootN/A4.48 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459013|GO6OHWN02HQ4W3All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium517Open in IMG/M
3300000651|AP72_2010_repI_A10DRAFT_1012189All Organisms → cellular organisms → Bacteria1119Open in IMG/M
3300000793|AF_2010_repII_A001DRAFT_10138484All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300002245|JGIcombinedJ26739_100654701All Organisms → cellular organisms → Bacteria928Open in IMG/M
3300003861|Ga0031654_10191002All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → unclassified Caulobacteraceae → Caulobacteraceae bacterium PMMR1585Open in IMG/M
3300004082|Ga0062384_100268339All Organisms → cellular organisms → Bacteria1044Open in IMG/M
3300004092|Ga0062389_104749102All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → unclassified Clostridium → Clostridium sp. KLE 1755512Open in IMG/M
3300004152|Ga0062386_100065945All Organisms → cellular organisms → Bacteria2744Open in IMG/M
3300004152|Ga0062386_101609721All Organisms → cellular organisms → Bacteria542Open in IMG/M
3300004598|Ga0068975_1178680All Organisms → cellular organisms → Bacteria752Open in IMG/M
3300004612|Ga0068961_1288400All Organisms → cellular organisms → Bacteria1158Open in IMG/M
3300005541|Ga0070733_10965828All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae572Open in IMG/M
3300005541|Ga0070733_11226057All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300005610|Ga0070763_10699403All Organisms → cellular organisms → Bacteria → Proteobacteria594Open in IMG/M
3300005843|Ga0068860_101200920All Organisms → cellular organisms → Bacteria779Open in IMG/M
3300006052|Ga0075029_100251982All Organisms → cellular organisms → Bacteria1115Open in IMG/M
3300006176|Ga0070765_101586348All Organisms → cellular organisms → Bacteria615Open in IMG/M
3300006176|Ga0070765_102187349All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300006640|Ga0075527_10130266All Organisms → cellular organisms → Bacteria705Open in IMG/M
3300006914|Ga0075436_101189794All Organisms → cellular organisms → Bacteria575Open in IMG/M
3300006954|Ga0079219_11013274All Organisms → cellular organisms → Bacteria → Proteobacteria691Open in IMG/M
3300006954|Ga0079219_12130733All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300009137|Ga0066709_101923476All Organisms → cellular organisms → Bacteria → Acidobacteria822Open in IMG/M
3300009633|Ga0116129_1026272All Organisms → cellular organisms → Bacteria1980Open in IMG/M
3300009633|Ga0116129_1199510All Organisms → cellular organisms → Bacteria568Open in IMG/M
3300010038|Ga0126315_10258155All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Fuerstiella → Fuerstiella marisgermanici1065Open in IMG/M
3300010046|Ga0126384_11321024All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae669Open in IMG/M
3300010048|Ga0126373_10376061All Organisms → cellular organisms → Bacteria → Acidobacteria1439Open in IMG/M
3300010048|Ga0126373_11364367All Organisms → cellular organisms → Bacteria775Open in IMG/M
3300010048|Ga0126373_13301923All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300010360|Ga0126372_12163965All Organisms → cellular organisms → Bacteria → Acidobacteria605Open in IMG/M
3300010366|Ga0126379_10869273All Organisms → cellular organisms → Bacteria → Acidobacteria1003Open in IMG/M
3300010376|Ga0126381_101365715All Organisms → cellular organisms → Bacteria → Acidobacteria1024Open in IMG/M
3300010376|Ga0126381_102840075Not Available691Open in IMG/M
3300010379|Ga0136449_101201784All Organisms → cellular organisms → Bacteria1194Open in IMG/M
3300010398|Ga0126383_13515712All Organisms → cellular organisms → Bacteria → Acidobacteria512Open in IMG/M
3300011270|Ga0137391_10426532All Organisms → cellular organisms → Bacteria1130Open in IMG/M
3300012200|Ga0137382_10283635All Organisms → cellular organisms → Bacteria1153Open in IMG/M
3300012200|Ga0137382_10477217All Organisms → cellular organisms → Bacteria → Acidobacteria884Open in IMG/M
3300012205|Ga0137362_10925638All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium744Open in IMG/M
3300012212|Ga0150985_119512849All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300012361|Ga0137360_11630420All Organisms → cellular organisms → Bacteria → Acidobacteria550Open in IMG/M
3300012477|Ga0157336_1029691All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium541Open in IMG/M
3300012917|Ga0137395_10003799All Organisms → cellular organisms → Bacteria7564Open in IMG/M
3300012925|Ga0137419_10748191All Organisms → cellular organisms → Bacteria796Open in IMG/M
3300012971|Ga0126369_10743428All Organisms → cellular organisms → Bacteria → Acidobacteria1060Open in IMG/M
3300012971|Ga0126369_11329134All Organisms → cellular organisms → Bacteria809Open in IMG/M
3300012984|Ga0164309_11413483All Organisms → cellular organisms → Bacteria594Open in IMG/M
3300015054|Ga0137420_1456088Not Available6876Open in IMG/M
3300016270|Ga0182036_10355208All Organisms → cellular organisms → Bacteria → Acidobacteria1130Open in IMG/M
3300016357|Ga0182032_10301067All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa ligni1266Open in IMG/M
3300016387|Ga0182040_11371038All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium598Open in IMG/M
3300017823|Ga0187818_10180823All Organisms → cellular organisms → Bacteria920Open in IMG/M
3300017961|Ga0187778_10772414All Organisms → cellular organisms → Bacteria654Open in IMG/M
3300017972|Ga0187781_10102856All Organisms → cellular organisms → Bacteria1985Open in IMG/M
3300018047|Ga0187859_10410868All Organisms → cellular organisms → Bacteria744Open in IMG/M
3300020580|Ga0210403_10059816All Organisms → cellular organisms → Bacteria3051Open in IMG/M
3300020581|Ga0210399_11157387All Organisms → cellular organisms → Bacteria → Acidobacteria616Open in IMG/M
3300020583|Ga0210401_10753839All Organisms → cellular organisms → Bacteria → Proteobacteria834Open in IMG/M
3300021088|Ga0210404_10160250All Organisms → cellular organisms → Bacteria → Acidobacteria1185Open in IMG/M
3300021088|Ga0210404_10694086All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium580Open in IMG/M
3300021168|Ga0210406_10092323All Organisms → cellular organisms → Bacteria2578Open in IMG/M
3300021180|Ga0210396_10030439All Organisms → cellular organisms → Bacteria4991Open in IMG/M
3300021181|Ga0210388_10185754All Organisms → cellular organisms → Bacteria → Acidobacteria1816Open in IMG/M
3300021181|Ga0210388_10222583All Organisms → cellular organisms → Bacteria1653Open in IMG/M
3300021403|Ga0210397_10228054All Organisms → cellular organisms → Bacteria1343Open in IMG/M
3300021404|Ga0210389_10221693All Organisms → cellular organisms → Bacteria1477Open in IMG/M
3300021404|Ga0210389_11405195All Organisms → cellular organisms → Bacteria → Proteobacteria532Open in IMG/M
3300021406|Ga0210386_10713887All Organisms → cellular organisms → Bacteria → Acidobacteria864Open in IMG/M
3300021407|Ga0210383_10011488All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium7523Open in IMG/M
3300021420|Ga0210394_10952521All Organisms → cellular organisms → Bacteria → Acidobacteria745Open in IMG/M
3300021433|Ga0210391_10742346All Organisms → cellular organisms → Bacteria768Open in IMG/M
3300021474|Ga0210390_10862711All Organisms → cellular organisms → Bacteria → Acidobacteria746Open in IMG/M
3300021475|Ga0210392_10346798All Organisms → cellular organisms → Bacteria1073Open in IMG/M
3300021475|Ga0210392_11150058All Organisms → cellular organisms → Bacteria581Open in IMG/M
3300021476|Ga0187846_10388628All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium574Open in IMG/M
3300021477|Ga0210398_10619892All Organisms → cellular organisms → Bacteria878Open in IMG/M
3300021559|Ga0210409_10306370All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1431Open in IMG/M
3300022722|Ga0242657_1071830All Organisms → cellular organisms → Bacteria804Open in IMG/M
3300022722|Ga0242657_1257048All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300024176|Ga0224565_1044915All Organisms → cellular organisms → Bacteria → Acidobacteria516Open in IMG/M
3300024225|Ga0224572_1039899All Organisms → cellular organisms → Bacteria → Acidobacteria886Open in IMG/M
3300025474|Ga0208479_1052488All Organisms → cellular organisms → Bacteria803Open in IMG/M
3300025854|Ga0209176_10203864All Organisms → cellular organisms → Bacteria508Open in IMG/M
3300025938|Ga0207704_10916645All Organisms → cellular organisms → Bacteria738Open in IMG/M
3300026360|Ga0257173_1033173All Organisms → cellular organisms → Bacteria691Open in IMG/M
3300027583|Ga0209527_1007632All Organisms → cellular organisms → Bacteria2252Open in IMG/M
3300027652|Ga0209007_1056392All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium996Open in IMG/M
3300027667|Ga0209009_1189552All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300027680|Ga0207826_1183124All Organisms → cellular organisms → Bacteria568Open in IMG/M
3300027703|Ga0207862_1108679All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae834Open in IMG/M
3300027729|Ga0209248_10056675All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter1198Open in IMG/M
3300027767|Ga0209655_10006697All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 893956Open in IMG/M
3300027768|Ga0209772_10012770All Organisms → cellular organisms → Bacteria2322Open in IMG/M
3300027775|Ga0209177_10314269All Organisms → cellular organisms → Bacteria601Open in IMG/M
3300027783|Ga0209448_10077081All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1119Open in IMG/M
3300027812|Ga0209656_10056378All Organisms → cellular organisms → Bacteria2193Open in IMG/M
3300027829|Ga0209773_10194014All Organisms → cellular organisms → Bacteria849Open in IMG/M
3300027842|Ga0209580_10449664All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300027908|Ga0209006_10045785All Organisms → cellular organisms → Bacteria → Acidobacteria3937Open in IMG/M
3300028798|Ga0302222_10437233All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300028906|Ga0308309_11385563All Organisms → cellular organisms → Bacteria → Acidobacteria603Open in IMG/M
3300029882|Ga0311368_10448160All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae940Open in IMG/M
3300030007|Ga0311338_11128070All Organisms → cellular organisms → Bacteria750Open in IMG/M
3300030399|Ga0311353_10429004All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales1184Open in IMG/M
3300030503|Ga0311370_10587663All Organisms → cellular organisms → Bacteria1339Open in IMG/M
3300030737|Ga0302310_10654847All Organisms → cellular organisms → Bacteria → Acidobacteria550Open in IMG/M
3300030991|Ga0073994_11842426All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300031028|Ga0302180_10061041All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales2243Open in IMG/M
3300031057|Ga0170834_110304424All Organisms → cellular organisms → Bacteria599Open in IMG/M
3300031234|Ga0302325_12141124All Organisms → cellular organisms → Bacteria683Open in IMG/M
3300031525|Ga0302326_11648605All Organisms → cellular organisms → Bacteria849Open in IMG/M
3300031718|Ga0307474_10000547All Organisms → cellular organisms → Bacteria27088Open in IMG/M
3300031718|Ga0307474_10632931All Organisms → cellular organisms → Bacteria844Open in IMG/M
3300031720|Ga0307469_12468670All Organisms → cellular organisms → Bacteria508Open in IMG/M
3300031723|Ga0318493_10731099All Organisms → cellular organisms → Bacteria556Open in IMG/M
3300031770|Ga0318521_10904173Not Available539Open in IMG/M
3300031820|Ga0307473_11151822All Organisms → cellular organisms → Bacteria574Open in IMG/M
3300031823|Ga0307478_10739057All Organisms → cellular organisms → Bacteria → Acidobacteria824Open in IMG/M
3300031890|Ga0306925_10116050All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2861Open in IMG/M
3300031912|Ga0306921_11370345All Organisms → cellular organisms → Bacteria → Acidobacteria779Open in IMG/M
3300031962|Ga0307479_11605141All Organisms → cellular organisms → Bacteria → Acidobacteria606Open in IMG/M
3300032001|Ga0306922_11282860All Organisms → cellular organisms → Bacteria → Acidobacteria742Open in IMG/M
3300032076|Ga0306924_10924781All Organisms → cellular organisms → Bacteria963Open in IMG/M
3300032180|Ga0307471_100917142All Organisms → cellular organisms → Bacteria → Acidobacteria1043Open in IMG/M
3300032782|Ga0335082_10945764All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium725Open in IMG/M
3300032893|Ga0335069_10189967All Organisms → cellular organisms → Bacteria2512Open in IMG/M
3300032896|Ga0335075_10467731Not Available1305Open in IMG/M
3300032896|Ga0335075_11113203All Organisms → cellular organisms → Bacteria695Open in IMG/M
3300033134|Ga0335073_12104144All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300033808|Ga0314867_079054Not Available764Open in IMG/M
3300034125|Ga0370484_0180945All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter573Open in IMG/M
3300034163|Ga0370515_0057662Not Available1704Open in IMG/M
3300034163|Ga0370515_0123417All Organisms → cellular organisms → Bacteria1114Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil20.15%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil8.21%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil7.46%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa6.72%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil5.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.22%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil5.22%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil3.73%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil3.73%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil2.99%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil2.24%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil2.24%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.24%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil2.24%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.24%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil2.24%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland1.49%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.49%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.49%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment0.75%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland0.75%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.75%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.75%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.75%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.75%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.75%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.75%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland0.75%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter0.75%
BiofilmEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm0.75%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.75%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.75%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.75%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.75%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.75%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.75%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459013Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis soil at the rocks surface 0-21cmEnvironmentalOpen in IMG/M
3300000651Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A10EnvironmentalOpen in IMG/M
3300000793Forest soil microbial communities from Amazon forest - 2010 replicate II A001EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300003861Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CREnvironmentalOpen in IMG/M
3300004082Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004152Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3EnvironmentalOpen in IMG/M
3300004598Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 72 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004612Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 53 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006640Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11BEnvironmentalOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009633Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10EnvironmentalOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012477Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.3.yng.040610Host-AssociatedOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300015054Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300017823Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3EnvironmentalOpen in IMG/M
3300017961Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MGEnvironmentalOpen in IMG/M
3300017972Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300018047Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10EnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300021406Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021433Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-OEnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300021475Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-OEnvironmentalOpen in IMG/M
3300021476Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)EnvironmentalOpen in IMG/M
3300021477Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-OEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300022722Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300024176Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU1EnvironmentalOpen in IMG/M
3300024225Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5Host-AssociatedOpen in IMG/M
3300025474Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 deep-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025854Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11B (SPAdes)EnvironmentalOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026360Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-BEnvironmentalOpen in IMG/M
3300027583Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027652Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027667Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027680Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)EnvironmentalOpen in IMG/M
3300027703Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)EnvironmentalOpen in IMG/M
3300027729Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300027767Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027768Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300027775Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)EnvironmentalOpen in IMG/M
3300027783Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027812Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027829Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300027842Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300028798Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300029882III_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300030007I_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300030399II_Palsa_E2 coassemblyEnvironmentalOpen in IMG/M
3300030503III_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030737Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2EnvironmentalOpen in IMG/M
3300030991Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031028Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031723Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23EnvironmentalOpen in IMG/M
3300031770Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M
3300032893Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1EnvironmentalOpen in IMG/M
3300032896Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4EnvironmentalOpen in IMG/M
3300033134Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2EnvironmentalOpen in IMG/M
3300033808Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_20EnvironmentalOpen in IMG/M
3300034125Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_tus_01_15EnvironmentalOpen in IMG/M
3300034163Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
N57_031156702170459013Grass SoilPFPAGMTINFEPIASVDGQGFFLEDMYVIRKNGAELLTPGVPYTAEEIEASMK
AP72_2010_repI_A10DRAFT_101218913300000651Forest SoilVTINFEPIASVDGQGFFLEDMYLIQKDGAELLTPGVPYSAEEIEAAMR*
AF_2010_repII_A001DRAFT_1013848413300000793Forest SoilITINFEPIASVDGQGFFLEDMYRITKDGAELLTPGVPYSAEEIEATMR*
JGIcombinedJ26739_10065470133300002245Forest SoilGFFLEDMYLITKDGAELLTPGVPYSAEQIEEEMRKER*
Ga0031654_1019100213300003861Freshwater Lake SedimentTTINFEPIAAINGQGYFLEDMYLVTETGAERLTPGIPDSAAEIESSMAQK*
Ga0062384_10026833913300004082Bog Forest SoilPLRVGTTINFEPIASIDGQGFFLEDMYLITKGGAELLTPRVPYSADEIEAAMH*
Ga0062389_10474910213300004092Bog Forest SoilMAGRPEGPLRQGTTINFEPIASIDGQGFFLEDTYIITKDGAELLTPGVPYSAEEIEAAMK
Ga0062386_10006594563300004152Bog Forest SoilIASIDGQGYYLEDMYLLTKDGAEVLTSGVPYTSEEIEAVMSAKP*
Ga0062386_10160972123300004152Bog Forest SoilLNRNRAGTTINFEPIASIDDQGFFLEDMFLRTKHGAELLTPGVPYSAEDIEAAMR*
Ga0068975_117868013300004598Peatlands SoilTINYEPIASVDGQGFFLEDMYLITKDGAELLTPGVPYSAEDIEAAMR*
Ga0068961_128840023300004612Peatlands SoilTINYEPIASVDGQGFFLEDMYLITKDGAELLTPGVPYSAEDI*
Ga0070733_1096582813300005541Surface SoilSVDGQGFFLEDMYLITKDGAELLTPGVPYSAEDIEAAMR*
Ga0070733_1122605713300005541Surface SoilEPIAAVDGQAFFLEDMYLITSTGAELLTPGVPYTADDIERAMEETHRRS*
Ga0070763_1069940323300005610SoilEPIASVDGQGFFLEDMYIITKNGAELLTPGVPYSGEEIEAAMR*
Ga0068860_10120092023300005843Switchgrass RhizosphereFEPIASADGQGFFLEDMYLITREGAELLTPGVPYSAEQIEAAMR*
Ga0075029_10025198233300006052WatershedsTTNLLEVFDSEPLKAGTTINYEPIASVDGQGFFLEDMYLITKDGAELLTPGVPYSAEDIEAAMR*
Ga0070765_10158634823300006176SoilVDGQGFFLEDMYLITRDGAELLTPGVPYSAEDIEAAMR*
Ga0070765_10218734913300006176SoilAGTTINFEPIAAVDGQGFFLEDMYVITNNGAELLTPKVPYSAQDIEAAMR*
Ga0075527_1013026623300006640Arctic Peat SoilLMAGRPVGPLRQGTTINFEPIASVDGQGFFLEDMYLITRDGAELLTPGVPYSAEDIEAAMR*
Ga0075436_10118979413300006914Populus RhizosphereLTNLVAAFPSEPLRARTTVNFEPIASIEGRGFFLEDMYLITKDGAELLTPGVPYSAEDIEAAMK*
Ga0079219_1101327423300006954Agricultural SoilVGFEPIASAGGQGYFLVDMFIIKKDGAELLTAGLPYSADEIEAAMRRSNRSRR*
Ga0079219_1213073313300006954Agricultural SoilDMTVNFEPIASVDGQGFFLEDMYLITKDGAEILTPGVPYTAEEIEAAMR*
Ga0066709_10192347623300009137Grasslands SoilVHTTNLLASFPVGPLREGTTINFEPIASIDGQGFFLEDMYLITKSGAELLTPGVPYSADEIETAMH*
Ga0116129_102627213300009633PeatlandIGAQGYYLEDLFLITKDGAELLTPGVPYSAEEIEAAMRANGQ*
Ga0116129_119951013300009633PeatlandIGAQGYYLEDLFLITKDGAELLTPGVPYSAEEIEAAMRANGR*
Ga0126315_1025815533300010038Serpentine SoilEGQSFYLEDMLVVTRDGAEVLTGGLPYTAEEIEAAMKR*
Ga0126384_1132102423300010046Tropical Forest SoilMTVAFEAIASIDNQRYYLEDMFVMTRNGAELLTPGVPYTAEEIEAAMRRR*
Ga0126373_1037606133300010048Tropical Forest SoilLRAGTTINFEPIASVDDQGFFLEDMYIITNDGAELLTPGMPYSAEEIGVAMRREW*
Ga0126373_1136436723300010048Tropical Forest SoilTINYEPIASVDGQGFFLEDMYLITKDGAELLTPGVPYFADAIEAAMMK*
Ga0126373_1330192323300010048Tropical Forest SoilTINYEPIASVDGQGFFLEDMYLITKDGAELLTPGVPYFADVIEAAMMK*
Ga0126372_1216396523300010360Tropical Forest SoilPSGVTINFEPIASVDGQGFFLEDMYLIRKDGAELLTPGVPYTAEEIEAAMR*
Ga0126379_1086927313300010366Tropical Forest SoilQGFFLEDMYLIQKNGAELLTPGVPYTAEEIEAAMR*
Ga0126381_10136571513300010376Tropical Forest SoilTNLVAAFPSEPLREGVTLNYEPIASVDGQGFFLEDMYLITKDGAELLTPGVPYFADEIEAAMMN*
Ga0126381_10284007513300010376Tropical Forest SoilIGGQGYYPEGVYLINKTGAEGLTRWVRHTAEEIEKFLAPK*
Ga0136449_10120178413300010379Peatlands SoilTNLLEVFDTEPLKAGTTINFEPIASVDGQGFFLEDMYLITKDGAELLTPGVPYSAEDIEAAMR*
Ga0126383_1351571223300010398Tropical Forest SoilGVTVNYEPIASVDGQGFFLEDMYLITKDGAELLTPGVPYFADEIEAAMTR*
Ga0137391_1042653213300011270Vadose Zone SoilPIAQIDGQGFYLEDMFLITATGAEILTPGVPYTADEIESAMH*
Ga0137382_1028363513300012200Vadose Zone SoilREGTTINFEPIASIDGQGFFLEDMYLITKSGAELLTPGVPYSADEIETAMH*
Ga0137382_1047721723300012200Vadose Zone SoilEGTTINFEPIASIDGQGFFLEDMYLITKSGAELLTPGVPYSADEIETAMH*
Ga0137362_1092563823300012205Vadose Zone SoilIASIDGQGYYLEDMYLITSDGAENLTPGVPYSAEDVEAAMK*
Ga0150985_11951284913300012212Avena Fatua RhizosphereMNLEAGLPKGALRAGTTIDFEPIASIDGQGYYLEDMYWITKDSAENLTPGVPYTAEEIEAAMKPEKR*
Ga0137360_1163042013300012361Vadose Zone SoilLPTEPLREGTTINFEPIAAVDGQGFFLEDMYVITKNGAELLTPKVPYSAEDIEAAMR*
Ga0157336_102969123300012477Arabidopsis RhizospherePPEPFPAGMTINFEPIASVDGQGFFLEDMYVIRKDGAELLTPGVPYTAEEIEASMK*
Ga0137395_1000379913300012917Vadose Zone SoilMTVNFEPIASVDGQGFFLEDMYLITKDGAELLTSGVPYSAEEIEAEMHKRHSFRE*
Ga0137419_1074819123300012925Vadose Zone SoilGFYLEDMFLITKNGAELLTPGVPYSAEEIEAAMR*
Ga0126369_1074342813300012971Tropical Forest SoilPPDPLPAGVTINFEPIASVDGQGFFLEDMYLIQKNGAELLTPGVPYTAEEIEATMR*
Ga0126369_1132913413300012971Tropical Forest SoilIASIQGQGFYLEDMFVIGENGAELLTPGLPYSAEEIEATMK*
Ga0164309_1141348323300012984SoilIDFEPIVSIGGQGYYLEDMYLIGKTGAEVLTPGVPYSAEEIETFLASKQ*
Ga0137420_145608893300015054Vadose Zone SoilMGKVSYLEDMFSLPERSGTLTPGVPYSAEEIEAAMR*
Ga0182036_1035520823300016270SoilVTVNYEPIASVDGEGFFLEDMYLIAKDGAELLTPGVFYFADEIEAG
Ga0182032_1030106713300016357SoilTINFEPIASVDGQGFFLEDMYWITKDGAELLTPGVPYSAEEIEATMR
Ga0182040_1137103823300016387SoilAGYPTEPLREGVTVNYEPIASVDGQGFFLEDMYLITKDGAELLTPGVPYFADEIEAAMMK
Ga0187818_1018082313300017823Freshwater SedimentHTTNLMAGRPVGPLRRGTTINFEPIASIDGQGFFLEDMYLITKDGAELLTPGVPYSAEEIEAAMR
Ga0187778_1077241413300017961Tropical PeatlandIASVDGQGFFLEDMYLIKNDGAELLTTGVPYSADEIEGAMR
Ga0187781_1010285623300017972Tropical PeatlandMVNFEPIASIDGQGFFLEDMFLITKDASLILTPGGPHSAEEIEMAMR
Ga0187859_1041086823300018047PeatlandTMNLTEGSVPGPMRAGTTIAFEPIASIGAQGYYLEDLFLITKEGAELLTRGVPYSAEEIEAAMRVTGR
Ga0210403_1005981613300020580SoilIDGQGFFLEDMYLITKGGAELLTPGVPYSADEIEAAMH
Ga0210399_1115738713300020581SoilIVSIGGQGYYLEDMYLINKTGAELLTPGVPYTAEEIETFLARK
Ga0210401_1075383913300020583SoilSPIGPLRAGTTINFEPIASIDGQGFFLEDMYLITSTGAELLTPGAPYSAEAIEAAMRK
Ga0210404_1016025033300021088SoilGMTINFEPIASVDGQGFFLEDMYVVQKDGAELLTPGVPYTAEEIEAGMR
Ga0210404_1069408613300021088SoilPIASVDGQGFFLEDMYLVTKGGAELLTPGVPYSAEEIEATMRGASGS
Ga0210406_1009232333300021168SoilNLLFALPSGPLKAGTTINYEPIASVDGQGFFLEDTYLITRDGAELLTPGVPYSAEDIEAAMR
Ga0210396_1003043913300021180SoilFEPIAAVDGQGFFLEDMYVITNNGAELLTPKVPYSAEDIEAAMR
Ga0210388_1018575453300021181SoilTTINFEPIASVDGQGFFLEDMYIITKNGAELLTPGVPYSAEEIEAAMR
Ga0210388_1022258313300021181SoilIASIDGQGFFLEDMYLITVTGAELLTPGVPYSAEAIEAAMGK
Ga0210397_1022805413300021403SoilEPIASIDGQGYFLEDMYLITATGADLLTPGVPYSAEAIEAAMRK
Ga0210389_1022169323300021404SoilDGQGFFLEDMYVITNNGAELLTPKVPYSAQDIEAAMR
Ga0210389_1140519533300021404SoilAGTTINFEPIASIDGQGFFLEDMYLITSTGAELLTPGAPYSAEAIEAAMRK
Ga0210386_1071388713300021406SoilDGQGFFLEDMYLITKDGAEILTPGVPYTAEEIEAAMR
Ga0210383_10011488123300021407SoilGQGFFLEDMYLITKGGAELLTPGVPYSADEIEVAMH
Ga0210394_1095252123300021420SoilRPPATLPAGMTINFEPIASADGQGFFLEDMYLITKEGAELLTAGVPYSAEQIEGEMR
Ga0210391_1074234613300021433SoilHTSNLGTGSPNGPLRAGTTINFEPIASIDGQGFFLEDMYRITATGAELLTPGVPYSAEAIEAAMRK
Ga0210390_1086271113300021474SoilAGTTINFEPIAAVDGQGFFLEDMYVITNNGAELLTPKVPYSAQDIEAAMR
Ga0210392_1034679823300021475SoilGYYLEDMYIIGKDGARVMTSGLPYTAEEIEAFVAQKP
Ga0210392_1115005823300021475SoilRAGTTINFEPIASIDAQGFFLEDMYLITATGAELLTPGVPYSAEAIEAAMRK
Ga0187846_1038862823300021476BiofilmAGYPSEPFRDGVTVNFEPIATVDGQGFFLEDMYLLTKDGAELLTPGVPYFAEEIEAAMKP
Ga0210398_1061989233300021477SoilPLRAGTTINFEPIASIDGQGFFLEDMYLITATGADLLTPGVPYSAEAIEAAMRK
Ga0210409_1030637023300021559SoilVHTTNLLAAYPVGPLRAGTTINFEPIASVDGQGLFLEDMYLITRDGAELLTPGVPYSAEDIEAAMK
Ga0242657_107183023300022722SoilRPVGPLRLGTTINFEPIASIDGQGFFLEDMYLITRDGAELLTPGVPYSAEDIESAMR
Ga0242657_125704813300022722SoilLRAGTTINFEPIASIDGQGFFLEDMYLITATGADLLTPGVPYSAEAIEAAMRK
Ga0224565_104491513300024176Plant LitterIASVDGQGFFLEDTYLITRDGAELLTPGVPYSAEDIEAAMR
Ga0224572_103989923300024225RhizosphereATNLVAARPPAMLPAGMTINFEPIASADGQGFFLEDMYLITKEGSELLTSGVPYSAEQIEAEMR
Ga0208479_105248823300025474Arctic Peat SoilIASIDGQGYFLEDMYLVTDTGVELLTPGVPYSAAEIESAMAQH
Ga0209176_1020386423300025854Arctic Peat SoilLMAGRPVGPLRQGTTINFEPIASVDGQGFFLEDMYLITRDGAELLTPGVPYSAEDIEAAM
Ga0207704_1091664513300025938Miscanthus RhizosphereFEPIASADGQGFFLEDMYLITREGAELLTPGVPYSAEQIEAAMR
Ga0257173_103317313300026360SoilEPIASIGGQGYYLEDMFLITKDGAEVLTPGVPYTAEEIESAVAAKR
Ga0209527_100763213300027583Forest SoilASIDGQGFFLEDMYLITREGAELLTPGVPYSAEQIEEEMR
Ga0209007_105639233300027652Forest SoilRQGTTINFEPIASIDGQGFFLEDMYIITKDGAELLTPGVPYSAQEIEAAMR
Ga0209009_118955213300027667Forest SoilIAAYPGPLRAGTTINFEPIASIDGQGFFLEDMFLIAKGGAELLTPGVPYSAQDIEAAMQ
Ga0207826_118312423300027680Tropical Forest SoilAGTTVNFEPIASVDGQGFFLEDMWLITKDGAELLTPGVPYTADEIEAAMK
Ga0207862_110867913300027703Tropical Forest SoilEPIASVDGQGFFLEDMWLITKDGAELLTPGVPYTADEIEAAMK
Ga0209248_1005667523300027729Bog Forest SoilDGPLRAGTTINFEPIASIDGQGFFLEDMYLLTKGGAELLTPGVPYSADEIEAAMH
Ga0209655_1000669713300027767Bog Forest SoilGFPDGPLRAGTTINFEPIASIDGQGFFLEDMYLLTKGGAELLTPGVPYSADEIEAAMH
Ga0209772_1001277023300027768Bog Forest SoilVHTTNMMAGRPAGPLKQGTTVNFEPIESVDSQGFFLEDMYLITSDGAELLTPGVPYSSKDIEAATR
Ga0209177_1031426923300027775Agricultural SoilASVDGQGFFLEDMYLITKDGAEILTPGVPYTAEEIEAAMR
Ga0209448_1007708123300027783Bog Forest SoilEPIASVDGQGFFLEDMYLITKNGAESLTPGVPYSAEEIEAQMR
Ga0209656_1005637813300027812Bog Forest SoilIASIDGQGYYLEDMYLLTKDGAEVLTSGVPYTSEEIEAVMSAKP
Ga0209773_1019401413300027829Bog Forest SoilPDEPLRAGTTINFEPIASIDGQGFFLEDMYLITKGGAELLTPGVPYSADEIEAAMH
Ga0209580_1044966423300027842Surface SoilLAGYPSDPLRAGVTVNFEPIASVNGQGFFLEDMYLITKDGTELLTPGVPYGAEEIEAAMK
Ga0209006_1004578543300027908Forest SoilTNLMAGRPVGPLRQGTTINFEPIASVDGQGFFLEDMYLVTRDGAELLTPGVPYSAKEIEAAMR
Ga0302222_1043723323300028798PalsaASIDGQGFFLEDMYLITVTGAELLTPGVPYSAEAIEAAMGK
Ga0308309_1138556313300028906SoilAALPTEPLRAGTTINFEPIAAVDGQGFFLEDMYVITNNGAELLTPKVPYSAQDIEAAMR
Ga0311368_1044816033300029882PalsaDGQGFFLEDTYLIVKDGCELLTPGVPYSAREIEAAME
Ga0311338_1112807023300030007PalsaVGPLRAGMTINFEPIASIDGQGFFLEDMYLITATGAELLTPGAPYSAEAIEAAMAK
Ga0311353_1042900413300030399PalsaIDGQGFFLEDMYIITKVGAELLTPGVPYSAEEIEAAMR
Ga0311370_1058766333300030503PalsaSIDGQGFFLEDMYLITVTGAELLTPGVPYSAEAIEAAMGK
Ga0302310_1065484733300030737PalsaSVDGQGFFLEDTYLIVKDGCELLTPGVPYSAREIEAAME
Ga0073994_1184242613300030991SoilALLPAGMTVNFEPIASVDGQGFFLEDMYLITKDGAELLTSGVPYSAEEIEAEMHKRRPFR
Ga0302180_1006104113300031028PalsaGQGYYLEDMYLIHKEGAELLTPGVPYSADEMEAAIRR
Ga0170834_11030442413300031057Forest SoilTTINFEPIASIDGQGFFLEDMYLITKGGAELLTPGVPYSADEIEAAMH
Ga0302325_1214112413300031234PalsaFEPIASIAGQGYYLEDLFLITKTGAELLTLDVPYSAEEIEAVMRR
Ga0302326_1164860513300031525PalsaEGSGKGPLRAGTTVAFEPIASIAGQGYYLEDLFLITKTGAELLTLDVPYSAEEIEAVMRR
Ga0307474_10000547253300031718Hardwood Forest SoilMTINFEPIASIDGEGFFLEDMYLITKGGAELLTPGVPYSADEIEAAMH
Ga0307474_1063293123300031718Hardwood Forest SoilALPTEPLRAGTTINFEPIAAVDGQGFFLEDMYVITNNGAELLTPKVPYSAEDIEDAMR
Ga0307469_1246867013300031720Hardwood Forest SoilAAFPVGPLRAGTTINFEPIASVDGQGFFLEDMFVISKDGAELLTPGVPYSAEDIEAAMH
Ga0318493_1073109913300031723SoilTNMVAADPSVPLRDGITINFEPIASVDGQGFFLEDMYRITKGGAELLTPGMPYSAEEIEATMR
Ga0318521_1090417323300031770SoilTIDFEPIAAAGGQGYYLEDMFLITAHGAENLTLCVPYRAEEIEAAMR
Ga0307473_1115182223300031820Hardwood Forest SoilVHTTNLLAAFPVGPLRAGTTINFEPIASVDGQGFFLEDMFVISKDGAELLTPGVPYSAEDIEAAMH
Ga0307478_1073905713300031823Hardwood Forest SoilAAVDGQGFFLEDMYVITNNGAELLTPKVPYSAEDIEAAMR
Ga0306925_1011605063300031890SoilDPSVPLRDGITINFESIASVDGQGFFLEDMYRITKDGAELLTPGVPYSAEEIEATMR
Ga0306921_1137034513300031912SoilASVDGQGFFLEDMYLITKDGAELLTPGVPYFADEIEAAMMK
Ga0307479_1160514123300031962Hardwood Forest SoilIASVDGQGFFLEDMYLITKGGVELLTPGVPYSAEEIEAAMRGASGS
Ga0306922_1128286013300032001SoilVDGQGFFLEDMYLITKDGAELLTPGVPYFADEIEAAMMK
Ga0306924_1092478113300032076SoilNFEPIASVDGQGFFLEDMYRITKDGAELLTPGVPYSAEEIEATMR
Ga0307471_10091714223300032180Hardwood Forest SoilFRANMTVNFEPITSVDGQGFFLEDMYLITKDGAEILTPGVPYTAEEIEAAMR
Ga0335082_1094576413300032782SoilNYEPIASIDGQGFFLEDMYLITKKGAELLTPGVPYSADEIETAIR
Ga0335069_1018996733300032893SoilNFEPIASVDGQGFFLEDMYLITKSGAELLTPGVPYSADEIESAMH
Ga0335075_1046773123300032896SoilTINFEPIASIDGQGFFLEDMYLITATGAELLTPGVPYSAEAIEAAMRK
Ga0335075_1111320313300032896SoilVIGPLRAGTTINFEPIASIDGQGYFLEDMYLVTDTGAELLTPGIPSSATEIESSMAQN
Ga0335073_1210414423300033134SoilSPVGPLKDGTTINFEPIASIDGQGFFLEDMYLITKAGTELLTPGVPYSANEIETAMH
Ga0314867_079054_22_1773300033808PeatlandMVIDFEPIASIAGQGYYLEDMYLVGKTRSEVLTLGVPYRAEEIEAFLATSR
Ga0370484_0180945_460_5733300034125Untreated Peat SoilVGQGFFLEDMYLITKEGAESLTPGVPYSAEQIEEEMR
Ga0370515_0057662_2_1123300034163Untreated Peat SoilQGFFLEDMYLVTATGAELLTPGAPYSAEAIEAAMRK
Ga0370515_0123417_877_10803300034163Untreated Peat SoilMNLTEGSVPGPMRAGTTIAFEPIASIGAQGYYLEDLFLITKEGAELLTRGVPYSAEEIEAAMRVTGR

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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