Metagenome / Metatranscriptome Family F059142

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F059142
Family Type	Metagenome / Metatranscriptome
Number of Sequences	134
Average Sequence Length	43 residues
Representative Sequence	MKFSKLSQLFLVSSIGLLVATLLTACQIVTIDYVFVASSAGSGT
Number of Associated Samples	112
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	98.51 %
% of genes near scaffold ends (potentially truncated)	98.51 %
% of genes from short scaffolds (< 2000 bps)	87.31 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.761 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog (27.612 % of family members)
Environment Ontology (ENVO)	Unclassified (39.552 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.254 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 51.39% β-sheet: 0.00% Coil/Unstructured: 48.61%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF10282	Lactonase	76.12
PF04239	DUF421	0.75
PF05649	Peptidase_M13_N	0.75
PF02540	NAD_synthase	0.75
PF03938	OmpH	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG0171	NH3-dependent NAD+ synthetase	Coenzyme transport and metabolism [H]	0.75
COG2323	Uncharacterized membrane protein YcaP, DUF421 family	Function unknown [S]	0.75
COG2825	Periplasmic chaperone for outer membrane proteins, Skp family	Cell wall/membrane/envelope biogenesis [M]	0.75
COG3590	Predicted metalloendopeptidase	Posttranslational modification, protein turnover, chaperones [O]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.76 %
Unclassified	root	N/A	2.24 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.76 %
Unclassified	root	N/A	2.24 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.76 %
Unclassified	root	N/A	2.24 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	97.76 %
Unclassified	root	N/A	2.24 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	45.52 %
Unclassified	root	N/A	2.24 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	45.52 %
Unclassified	root	N/A	2.24 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	45.52 %
Unclassified	root	N/A	2.24 %

Name	Rank	Taxonomy	Distribution
Terracidiphilus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus	33.58 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	3.73 %
Unclassified	root	N/A	2.24 %

Name	Rank	Taxonomy	Distribution
Terracidiphilus gabretensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	29.85 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	3.73 %
Unclassified	root	N/A	2.24 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001213\|JGIcombinedJ13530_100420694	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	8681	Open in IMG/M
3300001356\|JGI12269J14319_10279100	All Organisms → cellular organisms → Bacteria → Acidobacteria	610	Open in IMG/M
3300004092\|Ga0062389_102184297	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	727	Open in IMG/M
3300004121\|Ga0058882_1622151	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	604	Open in IMG/M
3300005541\|Ga0070733_10102103	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	1831	Open in IMG/M
3300005602\|Ga0070762_10739506	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	662	Open in IMG/M
3300006176\|Ga0070765_102080758	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	530	Open in IMG/M
3300009548\|Ga0116107_1174428	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	578	Open in IMG/M
3300009617\|Ga0116123_1075703	All Organisms → cellular organisms → Bacteria → Acidobacteria	920	Open in IMG/M
3300009632\|Ga0116102_1167502	All Organisms → cellular organisms → Bacteria → Acidobacteria	599	Open in IMG/M
3300009638\|Ga0116113_1072093	All Organisms → cellular organisms → Bacteria → Acidobacteria	813	Open in IMG/M
3300009641\|Ga0116120_1188018	All Organisms → cellular organisms → Bacteria → Acidobacteria	657	Open in IMG/M
3300009643\|Ga0116110_1196058	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	656	Open in IMG/M
3300009759\|Ga0116101_1084550	All Organisms → cellular organisms → Bacteria → Acidobacteria	722	Open in IMG/M
3300009762\|Ga0116130_1281768	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	530	Open in IMG/M
3300009764\|Ga0116134_1340897	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	514	Open in IMG/M
3300014492\|Ga0182013_10062901	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus	2715	Open in IMG/M
3300014492\|Ga0182013_10467625	All Organisms → cellular organisms → Bacteria → Acidobacteria	663	Open in IMG/M
3300014493\|Ga0182016_10505397	All Organisms → cellular organisms → Bacteria → Acidobacteria	698	Open in IMG/M
3300014494\|Ga0182017_10125631	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus	1669	Open in IMG/M
3300014498\|Ga0182019_10350989	All Organisms → cellular organisms → Bacteria → Acidobacteria	996	Open in IMG/M
3300014498\|Ga0182019_10363610	All Organisms → cellular organisms → Bacteria → Acidobacteria	979	Open in IMG/M
3300014498\|Ga0182019_11260653	All Organisms → cellular organisms → Bacteria → Acidobacteria	545	Open in IMG/M
3300014499\|Ga0182012_10876805	All Organisms → cellular organisms → Bacteria → Acidobacteria	567	Open in IMG/M
3300014501\|Ga0182024_10118676	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus	3791	Open in IMG/M
3300014502\|Ga0182021_11689546	All Organisms → cellular organisms → Bacteria → Acidobacteria	762	Open in IMG/M
3300014655\|Ga0181516_10588472	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus	574	Open in IMG/M
3300014657\|Ga0181522_10042761	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus	2532	Open in IMG/M
3300014838\|Ga0182030_10715641	All Organisms → cellular organisms → Bacteria → Acidobacteria	935	Open in IMG/M
3300014839\|Ga0182027_10337813	All Organisms → cellular organisms → Bacteria → Acidobacteria	1692	Open in IMG/M
3300017948\|Ga0187847_10018221	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	4393	Open in IMG/M
3300017948\|Ga0187847_10596990	All Organisms → cellular organisms → Bacteria → Acidobacteria	617	Open in IMG/M
3300017948\|Ga0187847_10643588	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	594	Open in IMG/M
3300017975\|Ga0187782_10769398	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	744	Open in IMG/M
3300017988\|Ga0181520_10275656	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	1272	Open in IMG/M
3300017988\|Ga0181520_10648308	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	727	Open in IMG/M
3300017988\|Ga0181520_10651253	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	725	Open in IMG/M
3300018008\|Ga0187888_1209121	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	772	Open in IMG/M
3300018012\|Ga0187810_10468277	All Organisms → cellular organisms → Bacteria → Acidobacteria	535	Open in IMG/M
3300018024\|Ga0187881_10032131	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2709	Open in IMG/M
3300018034\|Ga0187863_10834301	All Organisms → cellular organisms → Bacteria → Acidobacteria	523	Open in IMG/M
3300018037\|Ga0187883_10446035	All Organisms → cellular organisms → Bacteria → Acidobacteria	665	Open in IMG/M
3300018042\|Ga0187871_10293384	All Organisms → cellular organisms → Bacteria → Acidobacteria	900	Open in IMG/M
3300018042\|Ga0187871_10816459	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	520	Open in IMG/M
3300018044\|Ga0187890_10174848	All Organisms → cellular organisms → Bacteria → Acidobacteria	1224	Open in IMG/M
3300018044\|Ga0187890_10193624	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	1154	Open in IMG/M
3300018047\|Ga0187859_10311626	All Organisms → cellular organisms → Bacteria → Acidobacteria	853	Open in IMG/M
3300018086\|Ga0187769_10967700	All Organisms → cellular organisms → Bacteria → Acidobacteria	644	Open in IMG/M
3300021181\|Ga0210388_11781045	All Organisms → cellular organisms → Bacteria → Acidobacteria	508	Open in IMG/M
3300021401\|Ga0210393_11337652	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	574	Open in IMG/M
3300021405\|Ga0210387_11038452	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	717	Open in IMG/M
3300021406\|Ga0210386_10627763	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	928	Open in IMG/M
3300021433\|Ga0210391_10360734	All Organisms → cellular organisms → Bacteria → Acidobacteria	1140	Open in IMG/M
3300023068\|Ga0224554_1124531	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	576	Open in IMG/M
3300023091\|Ga0224559_1209501	All Organisms → cellular organisms → Bacteria → Acidobacteria	671	Open in IMG/M
3300023101\|Ga0224557_1158060	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	830	Open in IMG/M
3300025434\|Ga0208690_1036617	All Organisms → cellular organisms → Bacteria → Acidobacteria	785	Open in IMG/M
3300027537\|Ga0209419_1109327	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	551	Open in IMG/M
3300027609\|Ga0209221_1086068	All Organisms → cellular organisms → Bacteria → Acidobacteria	816	Open in IMG/M
3300027634\|Ga0209905_1055678	Not Available	630	Open in IMG/M
3300027676\|Ga0209333_1050094	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	1153	Open in IMG/M
3300027692\|Ga0209530_1155083	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	640	Open in IMG/M
3300027867\|Ga0209167_10264806	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	925	Open in IMG/M
3300027879\|Ga0209169_10588570	All Organisms → cellular organisms → Bacteria → Acidobacteria	582	Open in IMG/M
3300027908\|Ga0209006_10226086	All Organisms → cellular organisms → Bacteria → Acidobacteria	1617	Open in IMG/M
3300028068\|Ga0255355_1041069	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	739	Open in IMG/M
3300028070\|Ga0255353_1081741	Not Available	561	Open in IMG/M
3300028268\|Ga0255348_1058400	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	685	Open in IMG/M
3300028268\|Ga0255348_1075673	All Organisms → cellular organisms → Bacteria → Acidobacteria	577	Open in IMG/M
3300028565\|Ga0302145_10146327	All Organisms → cellular organisms → Bacteria → Acidobacteria	797	Open in IMG/M
3300028565\|Ga0302145_10231342	All Organisms → cellular organisms → Bacteria → Acidobacteria	615	Open in IMG/M
3300028572\|Ga0302152_10079977	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	1022	Open in IMG/M
3300028574\|Ga0302153_10276843	All Organisms → cellular organisms → Bacteria → Acidobacteria	574	Open in IMG/M
3300028745\|Ga0302267_10075717	All Organisms → cellular organisms → Bacteria → Acidobacteria	1737	Open in IMG/M
3300028762\|Ga0302202_10360899	All Organisms → cellular organisms → Bacteria → Acidobacteria	683	Open in IMG/M
3300028762\|Ga0302202_10485679	All Organisms → cellular organisms → Bacteria → Acidobacteria	560	Open in IMG/M
3300028779\|Ga0302266_10085724	All Organisms → cellular organisms → Bacteria → Acidobacteria	1314	Open in IMG/M
3300028780\|Ga0302225_10214366	All Organisms → cellular organisms → Bacteria → Acidobacteria	923	Open in IMG/M
3300028808\|Ga0302228_10307252	All Organisms → cellular organisms → Bacteria → Acidobacteria	710	Open in IMG/M
3300028813\|Ga0302157_10571609	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	585	Open in IMG/M
3300028859\|Ga0302265_1184240	All Organisms → cellular organisms → Bacteria → Acidobacteria	636	Open in IMG/M
3300028863\|Ga0302218_10221641	All Organisms → cellular organisms → Bacteria → Acidobacteria	606	Open in IMG/M
3300028867\|Ga0302146_10119692	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	1074	Open in IMG/M
3300028867\|Ga0302146_10361461	All Organisms → cellular organisms → Bacteria → Acidobacteria	556	Open in IMG/M
3300028869\|Ga0302263_10185624	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	829	Open in IMG/M
3300028873\|Ga0302197_10032027	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3216	Open in IMG/M
3300028874\|Ga0302155_10502730	All Organisms → cellular organisms → Bacteria → Acidobacteria	515	Open in IMG/M
3300028909\|Ga0302200_10045271	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2599	Open in IMG/M
3300028909\|Ga0302200_10196488	All Organisms → cellular organisms → Bacteria → Acidobacteria	1014	Open in IMG/M
3300029911\|Ga0311361_10344692	All Organisms → cellular organisms → Bacteria → Acidobacteria	1623	Open in IMG/M
3300029914\|Ga0311359_10921054	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	598	Open in IMG/M
3300029917\|Ga0311326_10095582	All Organisms → cellular organisms → Bacteria → Acidobacteria	1652	Open in IMG/M
3300029918\|Ga0302143_1031839	All Organisms → cellular organisms → Bacteria → Acidobacteria	1204	Open in IMG/M
3300029945\|Ga0311330_10876001	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	673	Open in IMG/M
3300029952\|Ga0311346_11364306	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	539	Open in IMG/M
3300029953\|Ga0311343_10094308	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	3465	Open in IMG/M
3300029953\|Ga0311343_11041444	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	639	Open in IMG/M
3300029986\|Ga0302188_10015180	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4238	Open in IMG/M
3300029988\|Ga0302190_10130786	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	1090	Open in IMG/M
3300029992\|Ga0302276_10082272	All Organisms → cellular organisms → Bacteria → Acidobacteria	1764	Open in IMG/M
3300029992\|Ga0302276_10226419	Not Available	848	Open in IMG/M
3300029992\|Ga0302276_10365511	All Organisms → cellular organisms → Bacteria → Acidobacteria	605	Open in IMG/M
3300030011\|Ga0302270_10331566	All Organisms → cellular organisms → Bacteria → Acidobacteria	828	Open in IMG/M
3300030041\|Ga0302274_10112326	All Organisms → cellular organisms → Bacteria → Acidobacteria	1452	Open in IMG/M
3300030044\|Ga0302281_10145891	All Organisms → cellular organisms → Bacteria → Acidobacteria	1040	Open in IMG/M
3300030045\|Ga0302282_1242075	All Organisms → cellular organisms → Bacteria → Acidobacteria	668	Open in IMG/M
3300030051\|Ga0302195_10155987	All Organisms → cellular organisms → Bacteria → Acidobacteria	1085	Open in IMG/M
3300030506\|Ga0302194_10325396	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	607	Open in IMG/M
3300030520\|Ga0311372_10212387	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3210	Open in IMG/M
3300030617\|Ga0311356_10167598	All Organisms → cellular organisms → Bacteria → Acidobacteria	2263	Open in IMG/M
3300030646\|Ga0302316_10162265	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	926	Open in IMG/M
3300030677\|Ga0302317_10502615	All Organisms → cellular organisms → Bacteria → Acidobacteria	527	Open in IMG/M
3300030688\|Ga0311345_10006613	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	17654	Open in IMG/M
3300030707\|Ga0310038_10414475	All Organisms → cellular organisms → Bacteria → Acidobacteria	583	Open in IMG/M
3300030737\|Ga0302310_10181413	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	1243	Open in IMG/M
3300031235\|Ga0265330_10135845	All Organisms → cellular organisms → Bacteria → Acidobacteria	1046	Open in IMG/M
3300031244\|Ga0302297_1011895	All Organisms → cellular organisms → Bacteria → Acidobacteria	1698	Open in IMG/M
3300031261\|Ga0302140_10006230	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	14997	Open in IMG/M
3300031261\|Ga0302140_10067300	All Organisms → cellular organisms → Bacteria → Acidobacteria	3787	Open in IMG/M
3300031525\|Ga0302326_10717687	All Organisms → cellular organisms → Bacteria → Acidobacteria	1458	Open in IMG/M
3300031759\|Ga0316219_1025511	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	2721	Open in IMG/M
3300031759\|Ga0316219_1104023	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	1086	Open in IMG/M
3300031788\|Ga0302319_10217208	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	2384	Open in IMG/M
3300031813\|Ga0316217_10071386	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	1708	Open in IMG/M
3300032898\|Ga0335072_11748204	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	516	Open in IMG/M
3300033405\|Ga0326727_10617725	All Organisms → cellular organisms → Bacteria → Acidobacteria	896	Open in IMG/M
3300033405\|Ga0326727_10631697	All Organisms → cellular organisms → Bacteria → Acidobacteria	880	Open in IMG/M
3300033405\|Ga0326727_10667082	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	842	Open in IMG/M
3300033405\|Ga0326727_10912333	All Organisms → cellular organisms → Bacteria → Acidobacteria	656	Open in IMG/M
3300033822\|Ga0334828_131137	All Organisms → cellular organisms → Bacteria → Acidobacteria	592	Open in IMG/M
3300033982\|Ga0371487_0462748	All Organisms → cellular organisms → Bacteria → Acidobacteria	538	Open in IMG/M
3300034091\|Ga0326724_0553012	All Organisms → cellular organisms → Bacteria → Acidobacteria	580	Open in IMG/M
3300034130\|Ga0370494_204761	All Organisms → cellular organisms → Bacteria → Acidobacteria	513	Open in IMG/M
3300034282\|Ga0370492_0482664	All Organisms → cellular organisms → Bacteria → Acidobacteria	503	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.25%
Host-Associated	Host-Associated	0.75%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	74.63%
Aquatic	Environmental → Aquatic	24.63%
Plants	Host-Associated → Plants	0.75%

Habitat	Taxonomy	Distribution
Peat	Environmental → Terrestrial → Peat	47.76%
Soil	Environmental → Terrestrial → Soil	26.87%
Freshwater	Environmental → Aquatic → Freshwater	23.88%
Marine	Environmental → Aquatic → Marine	0.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	47.76%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	21.64%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.43%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	6.72%
Loam	Environmental → Terrestrial → Soil → Loam	6.72%
Lentic	Environmental → Aquatic → Freshwater → Lentic	2.24%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.75%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	47.76%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	13.43%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	9.70%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	7.46%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.73%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.73%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	2.99%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	2.24%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.75%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	27.61%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	8.96%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	7.46%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	6.72%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	5.97%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	4.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.48%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	4.48%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.73%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	3.73%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.99%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	2.24%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.24%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.49%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.49%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.49%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.49%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.75%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.75%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.75%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.75%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.75%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004121	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF109 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009548	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_100	Environmental	Open in IMG/M
3300009617	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_100	Environmental	Open in IMG/M
3300009632	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40	Environmental	Open in IMG/M
3300009638	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10	Environmental	Open in IMG/M
3300009641	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150	Environmental	Open in IMG/M
3300009643	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300009762	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300023068	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 20-24	Environmental	Open in IMG/M
3300023091	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 30-34	Environmental	Open in IMG/M
3300023101	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 10-14	Environmental	Open in IMG/M
3300025434	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10 (SPAdes)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027634	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812S1M	Environmental	Open in IMG/M
3300027676	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)	Environmental	Open in IMG/M
3300027692	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028068	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T75	Environmental	Open in IMG/M
3300028070	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T25	Environmental	Open in IMG/M
3300028268	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T-25.v5	Environmental	Open in IMG/M
3300028565	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_3	Environmental	Open in IMG/M
3300028572	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_1	Environmental	Open in IMG/M
3300028574	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_2	Environmental	Open in IMG/M
3300028745	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_3	Environmental	Open in IMG/M
3300028762	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_3	Environmental	Open in IMG/M
3300028779	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_2	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300028808	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2	Environmental	Open in IMG/M
3300028813	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_3	Environmental	Open in IMG/M
3300028859	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_1	Environmental	Open in IMG/M
3300028863	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_1	Environmental	Open in IMG/M
3300028867	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_3	Environmental	Open in IMG/M
3300028869	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N1_4	Environmental	Open in IMG/M
3300028873	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_1	Environmental	Open in IMG/M
3300028874	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_1	Environmental	Open in IMG/M
3300028909	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_1	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029914	III_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029917	I_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029918	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_1	Environmental	Open in IMG/M
3300029945	I_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029953	II_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029986	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_1	Environmental	Open in IMG/M
3300029988	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_3	Environmental	Open in IMG/M
3300029992	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_3	Environmental	Open in IMG/M
3300030011	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_3	Environmental	Open in IMG/M
3300030041	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_1	Environmental	Open in IMG/M
3300030044	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_2	Environmental	Open in IMG/M
3300030045	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_3	Environmental	Open in IMG/M
3300030051	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_2	Environmental	Open in IMG/M
3300030506	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_1	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030646	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_2	Environmental	Open in IMG/M
3300030677	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_3	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300030737	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2	Environmental	Open in IMG/M
3300031235	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG	Host-Associated	Open in IMG/M
3300031244	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N3_2	Environmental	Open in IMG/M
3300031261	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031759	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18003P	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300031813	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - 1anoA	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033822	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 5-9	Environmental	Open in IMG/M
3300033982	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB22AY SIP fraction	Environmental	Open in IMG/M
3300034091	Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00N	Environmental	Open in IMG/M
3300034130	Peat soil microbial communities from wetlands in Alaska, United States - Collapse_03_16	Environmental	Open in IMG/M
3300034282	Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1004206946	3300001213	Wetland	MKFNKLSQLFLVSAVGLVMAALLTACQIVTIDYVFVADSAGS
JGI12269J14319_102791002	3300001356	Peatlands Soil	MKFNKLSQLLLVSAIGLILASFLAACQLVTIDFVFV
Ga0062389_1021842971	3300004092	Bog Forest Soil	MKFSKLSQLILVSTFGLFLALYLTACQIVTVDFVFVAASSGNGAGSAG
Ga0058882_16221512	3300004121	Forest Soil	MKFSKLSQLFLVSTIGLTLATYLTACNIVTIDYVFVAASASNTAGSDGQIY
Ga0070733_101021031	3300005541	Surface Soil	MKLSKLSQLLLVSLMGLLAASLLTACQIITIDYIFVASSAGSG
Ga0070762_107395061	3300005602	Soil	MKFSKLSQLFLVSIIGLLVATLLTSCAIVTIDYVFVGNSSGSGVG
Ga0070765_1020807582	3300006176	Soil	MKLSKLSQFVLVSATGLLLATTLTACNIVTIDYVFVAA
Ga0116107_11744281	3300009548	Peatland	MKFSKLSQLFLASAIGLLVATYFSACALVTIDFVFVACSAG
Ga0116123_10757032	3300009617	Peatland	MKFSKLSQLFLVSSIGLLVATVFSACAITTIDYVFVACSAGSGTASA
Ga0116102_11675022	3300009632	Peatland	MKFSKLSQLFLVSSIGLLVATIFSACAITTIDYVFVACSAGSGTASAGQIQ
Ga0116113_10720931	3300009638	Peatland	MKFNKLSQLFLVSILGLMVAALLTSCAYVTIDYVFIANSAGSGA
Ga0116120_11880181	3300009641	Peatland	MKFSKLSQLFLVSAIGLLVATYFSACALVTIDFVFVACSAGAGTSS
Ga0116110_11960582	3300009643	Peatland	MKFSKLSQLLLVSAIGLIVATLLTSCAIVTIDFVFVASSSSVGGTGQIQTY
Ga0116101_10845502	3300009759	Peatland	MKFSKLRQLIPVLSIGLLVATLLTACSLTTIDYVFVA
Ga0116130_12817682	3300009762	Peatland	MKFSKLSQLLLVSAIGLIVATLLTSCAIVTIDYVFVASSTGSGSGSAGQI
Ga0116134_13408972	3300009764	Peatland	MKFSKLSQLLLVSAIGLIVATLLTSCEIVTIDYVFVASS
Ga0182013_100629011	3300014492	Bog	MKFSKLSQLVLVSAIGLLVATLLTACQIVTIDYVFVA
Ga0182013_104676252	3300014492	Bog	MKFSKLSQLFLASSIGLLGATVFTACAITTIDYVFVASSAGTGTSNDGQIAA
Ga0182016_105053972	3300014493	Bog	MKLSKLSRTILVSSLGLVVATLLTSCEIVTIDYVFVAN
Ga0182017_101256312	3300014494	Fen	MKFSKLSQLFLVSSIGLLVAILFTACEIQTIDYVFVADSAG
Ga0182019_103509891	3300014498	Fen	MKFSKPSQLFLVSSIGLLVATLLTACSLTTVDYVYVGSSAGIQIFAV
Ga0182019_103636101	3300014498	Fen	MKFNKMSQLFLVSTVGLLVAVFLAGCQLVTIDYVF
Ga0182019_112606531	3300014498	Fen	MKFSKLRQLIPVSSIGLVVATLLTACSITTIDYVYVASSTGIS
Ga0182012_108768052	3300014499	Bog	MKLNKTSQLFLVSILGLAVASLLTSCAYVTIDYVFVADSSGSGSG
Ga0182024_101186764	3300014501	Permafrost	MKLSKLSRTILVSSAGLVLATLLTSCEIVTIDYLFVANSAGTG
Ga0182021_116895461	3300014502	Fen	MKFSKLRQFVPVLTIGLLVATLLTACSLTSINYVYV
Ga0181516_105884721	3300014655	Bog	MKFSKLSQLFLVSSIGLLVAVFLTACQIVTIDYVFVAGSKSTGSSTAGV
Ga0181522_100427611	3300014657	Bog	MVQKRRKRMKFSKLSQLFLVSSIGLLVATLLNGCLLVSID
Ga0182030_107156412	3300014838	Bog	MKFSKLSQLFLVSSIGLLVATVFSACAITTIDYVFV
Ga0182027_103378132	3300014839	Fen	MKFSKSSQLFLVSSIGLLVATVLTACSLPTIDYVYVA
Ga0187847_100182211	3300017948	Peatland	MKFSKLSQLFLVSMIGLAVASLLTACEIVTIDYVFVAS
Ga0187847_105969902	3300017948	Peatland	MKFSKLSQLFLVSTTGLLLATTLTSCEISTIDYVFVADSVGSGTGTAGQ
Ga0187847_106435882	3300017948	Peatland	MKFNRLSQLFLVSTLGLAAATLLTSCDIVTIDYIFVADSAGPSAGSAGQIQTLDS
Ga0187782_107693982	3300017975	Tropical Peatland	MKFSRLSQLFLVSTLGLAVATFLTSCDIVTIDYVFVADSAGSSAGSAGQIQT
Ga0181520_102756561	3300017988	Bog	MKFNRLSQLFLVSTLGLAVATLLTSCDIVTIDYIFVADS
Ga0181520_106483082	3300017988	Bog	MKLSKLSQLFLVSAIGLILASWMTACNIVTIDYVFVGTSGGSSNGN
Ga0181520_106512532	3300017988	Bog	MKFNTLSQLFLVSTLGLAVATLLTSCDIVTIDYIFVADS
Ga0187888_12091211	3300018008	Peatland	MKFSKLSQLFLVSMIGLAVAFLMAACEIVTIDYVFVASSQGSGSSSAGQIQT
Ga0187810_104682771	3300018012	Freshwater Sediment	MKFSKLSQLALVSILGLMVATFLSGCMIVTIDYVFVACSSS
Ga0187881_100321311	3300018024	Peatland	MKFSKPSQLFLVSAIGLLAATLLTACQIVTIDYVF
Ga0187863_108343011	3300018034	Peatland	MKFSKSSQLFLVSTTGLLLATLLTSCEISTIDYVYVASSSGSGTGSAGQIQTF
Ga0187883_104460352	3300018037	Peatland	MKFSKLSQLLLVSTIGLLAATLLTSCERTTVDYVFVA
Ga0187871_102933841	3300018042	Peatland	MKFNRLSQLFLVSTLGLAAATLLTSCDIVTIDYIF
Ga0187871_108164591	3300018042	Peatland	MKLSKLSQLFLVSAIGLTLATWLTACNIVTIDYVYVTTSGGSSSGDTGQIY
Ga0187890_101748481	3300018044	Peatland	MKFSKLSQLVLVSAIGLVLATFLTACNLVTIDYLF
Ga0187890_101936241	3300018044	Peatland	MKFNRLSQLFLVSTLGLAVATLLTSCDIVTIDYIFVADSAGPSAGS
Ga0187859_103116262	3300018047	Peatland	MKFSKSSQLFLVSSIGLLVATFLTACSITTIDYVFVATTSGSGSSGGAQI
Ga0187769_109677001	3300018086	Tropical Peatland	MKFSKLSQLFLVSSIGLIVATLPTACNIVTADYVFVAA
Ga0210388_117810451	3300021181	Soil	MKFNKLSQLFLVSTIGLSVATLLTSCAYVTIDYVFVANS
Ga0210393_113376522	3300021401	Soil	MKFNKLSQLFLVSIIGLFAASLLTSCAIVTIDYVFIADSVGSGTGSGGQIQTYDAD
Ga0210387_110384521	3300021405	Soil	MKLSKPSQLLLVSLAGLAAAALLSSCQIITIDYVFVASSAGS
Ga0210386_106277632	3300021406	Soil	MKFSKLSQLFLVSTIGLTLATYLTACNIVTIDYVFVAASASNTAGSDGQIYT
Ga0210391_103607341	3300021433	Soil	MKFSKLSQLFLVSAFGLILATLLTACQLVSIDIVYVADS
Ga0224554_11245311	3300023068	Soil	MKFSKLSQLLLVSVIGLTVATLLTSCEIATIDYVFVASSTSAGGAGQILTY
Ga0224559_12095012	3300023091	Soil	MKFSKLRELLLVSSIGLLVAALLTACQIDTVDYLFVSS
Ga0224557_11580602	3300023101	Soil	MKFSKLSQLFLVSMIGLAVATLLTACQIVTIDYVFVANS
Ga0208690_10366172	3300025434	Peatland	MKFSKLRQLIPVLSIGLLVATLLTACSLTTIDYVFVASSSGIDTFA
Ga0209419_11093271	3300027537	Forest Soil	MKFNKLSQLFLVSIIGLLVASLLTSCAIVTIDYVFVANSAGSG
Ga0209221_10860681	3300027609	Forest Soil	MKFNKLSQLFLVSIIGLSVATLLTSCAIVTIDYVFVAN
Ga0209905_10556782	3300027634	Thawing Permafrost	MKFSKSSQLFLVSAIGLLVAALLTACSITTIDYVFVASSAASAASGEMCIRDRA
Ga0209333_10500942	3300027676	Forest Soil	MKFNKLSQLFLVSIIGLLVATLLTSCAIVTIDYVFVANSAGSGTGSYR
Ga0209530_11550832	3300027692	Forest Soil	MKFNKLSQLFLVSIIGLLVATLLTSCAIVTIDYVFVANSAGSGTGSTGQIQT
Ga0209167_102648061	3300027867	Surface Soil	MKLSKLSQLLLVSLMGLLAASLLTACQIITIDYIFVASSAGSGSSSGVI
Ga0209169_105885701	3300027879	Soil	MKFSKLSQLFLVSIIGLLAATLLTSCAIVTIDYVFVGSSAG
Ga0209006_102260862	3300027908	Forest Soil	MKFSKLSQLFLVSIIGLLAATLLTSCAIVTIDYVFV
Ga0255355_10410692	3300028068	Soil	MKFSKLSQLFLVSAIGLLVATLLTACQIVTIDYVYV
Ga0255353_10817412	3300028070	Soil	MKFSKLSQLFLVSTTGLLLASLLTSCEISTIDYVFVAD
Ga0255348_10584002	3300028268	Soil	MKFSKLSQLFLVSAIGLLVATLLTACQIVTIDYVY
Ga0255348_10756732	3300028268	Soil	MKFSKTSQLFLVSSIGLLVATLLTACSLTTVDYVY
Ga0302145_101463272	3300028565	Bog	MKFSKLSQLFLVSTIGLTGSTLLTSCAINTIDYVFVSN
Ga0302145_102313421	3300028565	Bog	MKFSKLSQLFLVSTIGLAGSALLTSCAINTIDYVFVGNSAGTSAGSAGQIQTYDADSG
Ga0302152_100799771	3300028572	Bog	MKLSKLSRTILVSSLGLVVATLLTSCEIVTIDYVFVANSAGSGSGTT
Ga0302153_102768431	3300028574	Bog	MKFSKLRQLSPVLSIGLLVATLLTACSITTIDYVFVASSSGIQT
Ga0302267_100757171	3300028745	Bog	MKFSKLSQLFLVSTIGLAGSALLTSCAINTIDYVFVGNSAGTSAGSAGQIQTYD
Ga0302202_103608991	3300028762	Bog	MKFSKLSQLFLVSTLGLLVATLLTSCDIVTIDYVFV
Ga0302202_104856791	3300028762	Bog	MKFSKLSQLFLVSTIGLAGSALLTSCAINTIDYVF
Ga0302266_100857241	3300028779	Bog	MKFSKLSQLFLVSILGLSVATLLTSCAYVTIDYVFVANSAGSGTSSTGQIETYDADSST
Ga0302225_102143661	3300028780	Palsa	MKFSKLSQLLLVSAIGLLVATLLAACAINTIDYVFVANSAGSGTGSAG
Ga0302228_103072522	3300028808	Palsa	MKFSKLSQLLLVSAIGLLVATLLAACAINTIDYVFVANSAGSGT
Ga0302157_105716091	3300028813	Bog	MKFSKLSQLFLVSTLGLLVATLLTSCDIVTIDYVFVADSAGSGSGSAG
Ga0302265_11842401	3300028859	Bog	MKFSKPSQLFLVSSIGLLVATFLTACNIQTIDYLFVASSG
Ga0302218_102216411	3300028863	Palsa	MKFSKLSQLLLVSAIGLLVATLLAACAINTIDYVFVANSAGSGTGSAGQ
Ga0302146_101196921	3300028867	Bog	MKLSKLSRTILVSSLGLVLATLLTSCDIVTVDYLFVANSAGTSG
Ga0302146_103614611	3300028867	Bog	MKFSKLSQLFLVSTIGLAGSALLTSCAINTIDYVFVGNSAGTSAGR
Ga0302263_101856242	3300028869	Fen	MKFSKSGQLFLVSAIGLLVATLLTACQIVTIDYVFVASSVAA
Ga0302197_100320273	3300028873	Bog	MKFSKLSQLFLVSVLGLSVAALFSACDIVTVDYVYVASAVVAS
Ga0302155_105027301	3300028874	Bog	MKFSKVSQLFLVSVIGLVVASLLTACQIVTIDILFVASSTGISTFDVDSESG
Ga0302200_100452711	3300028909	Bog	MKFSKPSQLFLVSSIGLLVATLLTACSITTIDYVFV
Ga0302200_101964882	3300028909	Bog	MKFSKLSQLFLVSTIGLTGSTLLTSCAINTIDYVFVGNSAGSSAGSAGQIETYDAD
Ga0311361_103446921	3300029911	Bog	MKFSKPSQLFLVSSIGLLVATFLTACNIQTIDYLFVASSGGSGS
Ga0311359_109210542	3300029914	Bog	MKFSKLSQLFLVSGLGLMVAVLISACDIITVDYVYVASSTGSGSSSNGQIDIFAAD
Ga0311326_100955821	3300029917	Bog	MKFNKLSQLFLVSILGLSVATLLTSCAYVTIDYVFIANSAG
Ga0302143_10318392	3300029918	Bog	MKFSKLSQLFLVSSIGLLGATVFSACAITTIDYVFVASSA
Ga0311330_108760011	3300029945	Bog	MKFSKLSQLFLVSMIGLAVATLLTACQIVTIDYVFV
Ga0311346_113643062	3300029952	Bog	MKFSKLSQLVLVSVIGLAAATLLTACQIVTIDYIFVANSAGSGSSSTGQI
Ga0311343_100943081	3300029953	Bog	MKLSKLSQLFLVSAIGLILATWLTACNIVTIDYVYVSTSGGSSS
Ga0311343_110414441	3300029953	Bog	MKFSKLSQLFLVSSIGLLVATLLTACQIVTIDYVFVA
Ga0302188_100151801	3300029986	Bog	MKFSKLRQLSPVLSIGLLVATLLTACSITTIDYVF
Ga0302190_101307861	3300029988	Bog	MKFSKLSQLFLVSMIGLAVATLLTACQIVTIDYVFVAN
Ga0302276_100822723	3300029992	Bog	MKFNKMSQLFLVSTVGLLVAVFLAGCQLVTIDYVFV
Ga0302276_102264192	3300029992	Bog	MKFNKLSQLFLVSFLGLFLATLLTACDIVTVDFVYVASSA
Ga0302276_103655112	3300029992	Bog	MKFSKRSQLFLVSTLGLVAAALLSSCEIVTIDYVFV
Ga0302270_103315661	3300030011	Bog	MKFNKLSQLFLVSILGLSVATLLTSCAYVTIDYVFIANSAGSGSGSTGQI
Ga0302274_101123262	3300030041	Bog	MKFNKLSQLFLVSILGLSVATLLTSCAYVTIDYVFVANS
Ga0302281_101458911	3300030044	Fen	MKLSKLSRTILVSSLGLVLATLLTSCDIVTVDYLFVANSA
Ga0302282_12420752	3300030045	Fen	MKFNKLSQLFLVSILGLSVATLLTSCAYVTIDYVFIANSAGS
Ga0302195_101559871	3300030051	Bog	MKFSKLSQLFLVSSIGLLVATVFTACAITTIDYVFVANSAGT
Ga0302194_103253961	3300030506	Bog	MKFSKLSQLFLVSSIGLLVATLLTACQIVTIDYVFVASSAGSGT
Ga0311372_102123873	3300030520	Palsa	MKLSKLSRTILVSSAGLVLATLLTSCEIETIDYLFVANSAGT
Ga0311356_101675981	3300030617	Palsa	MKFSKLSQLFLVSAIGLLVATLLTACAINTIDYVFVANSAGSGTGSTGQIQT
Ga0302316_101622651	3300030646	Palsa	MKFSKLSQLFLVSILGLVVATLLTACEIESIDYVFVANSAGSSPG
Ga0302317_105026152	3300030677	Palsa	MKFSKLGQLFLVSIIGLLVATLFTACDIKTVDYVFVANSAGSG
Ga0311345_100066131	3300030688	Bog	MKFSKLSQLFLVSTLGLLVAGLLTACQIVTIDYVFVADSTGTSA
Ga0310038_104144751	3300030707	Peatlands Soil	MKFNKLSQLFLVSILGLLGSTLLTSCAIVTIDYVFV
Ga0302310_101814131	3300030737	Palsa	MKFSKWSQLFLVSLIGLSVATLLTSCAIVTIDYVFVASASGSGTGTAGQIQTYD
Ga0265330_101358451	3300031235	Rhizosphere	MKFSKLSQLILVSSISLLMATYFSACALVTVDYVFVACSSGSGTSSAGE
Ga0302297_10118951	3300031244	Fen	MKFSKFRQLIPVSLIGLLAATLLTACSITTIDYVYVASTSGIQ
Ga0302140_100062301	3300031261	Bog	MKFSKLSQLFLVSVLGLSVAALFSACDIVTVDYVY
Ga0302140_100673001	3300031261	Bog	MKLSKLSRTILVSSLGLVLATLLTSCDIVTVDYLFVAN
Ga0302326_107176872	3300031525	Palsa	MKFSKLRQLLLVSAIGLLVATLLTACAINTIDYVFVANSAGSGTDSTGQIQT
Ga0316219_10255113	3300031759	Freshwater	MKFSKLSQLFLVSSIGLLVATLLTACQIVTIDYVMVASSASSGT
Ga0316219_11040232	3300031759	Freshwater	MKLSKYSQLLLVFTIGLLAATLMTACQIVTIDYVMVASSAGTGTSNNGTIDIY
Ga0302319_102172083	3300031788	Bog	MKFSKLSQLFLVSILGLVVATLLTACEIETIDYVFVANSAGTSA
Ga0316217_100713862	3300031813	Freshwater	MKLSKYSQLLLVFTIGLLAATLMTACQIVTIDYVMVASSAGTGTSNNGTI
Ga0335072_117482041	3300032898	Soil	MKFSKLSQLFLVSAIGLILATYLTACNIVTIDYVFVAASAGDTAGSGGQIYT
Ga0326727_106177251	3300033405	Peat Soil	MKFNKLSQLFLVSSISLILATVLTGCELVTIDYVFV
Ga0326727_106316971	3300033405	Peat Soil	MKFSKLRQLIPVLFVGLLVATLLTACSITSIDYVYVASYGAGS
Ga0326727_106670822	3300033405	Peat Soil	MKFSKLSQLFLVSTIGLLVATLLTACQIVTIDYIFVASSTGIETYA
Ga0326727_109123331	3300033405	Peat Soil	MKFSKSSQLFLVSSIGLLVATFLTACSITTIDFVYVAST
Ga0334828_131137_484_591	3300033822	Soil	MKFSKLSQLFLVSAIGLFLATYLTACQIVTIDYVFV
Ga0371487_0462748_364_537	3300033982	Peat Soil	MKFSKLSQLFLVSSIGLLVATVFSACAITTIDYIFVACSAGSGASSAGQIQTYAVDSQ
Ga0326724_0553012_3_155	3300034091	Peat Soil	MKFSKLSQLFLVSSIGLLVATVFTACAITTIDYVFVACSAGSGTSSAGEIQ
Ga0370494_204761_398_511	3300034130	Untreated Peat Soil	MQLLLVSSIGLLVATFFSACAITTIDFVYVACSAGSG
Ga0370492_0482664_355_501	3300034282	Untreated Peat Soil	MKFNKLSQLFLVSIIGLLVATLLTSCAYVTIDYVFIANSAGSGSGSTGQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F059142

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences