Metagenome / Metatranscriptome Family F059132

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F059132
Family Type	Metagenome / Metatranscriptome
Number of Sequences	134
Average Sequence Length	58 residues
Representative Sequence	MTSSSRARPRAIDFHAHVIVPEVYALAAQHNIFSELPTDPGVTDDMRKSIKARA
Number of Associated Samples	113
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	96.27 %
% of genes near scaffold ends (potentially truncated)	98.51 %
% of genes from short scaffolds (< 2000 bps)	92.54 %
Associated GOLD sequencing projects	108
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.26

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (28.358 % of family members)
Environment Ontology (ENVO)	Unclassified (41.045 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.522 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.05% β-sheet: 0.00% Coil/Unstructured: 71.95%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.26
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.26
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF03401	TctC	22.39
PF02538	Hydantoinase_B	17.91
PF00005	ABC_tran	8.96
PF01557	FAA_hydrolase	3.73
PF05378	Hydant_A_N	0.75
PF04909	Amidohydro_2	0.75
PF02653	BPD_transp_2	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG0146	N-methylhydantoinase B/oxoprolinase/acetone carboxylase, alpha subunit	Amino acid transport and metabolism [E]	35.82
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	22.39
COG0145	N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit	Amino acid transport and metabolism [E]	1.49

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	86.57 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.75 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	67.16 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	15.67 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.75 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	46.27 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	19.40 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	14.93 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.75 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	46.27 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	15.67 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	14.93 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.75 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	46.27 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	15.67 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	14.93 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.75 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	46.27 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	15.67 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	14.93 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.75 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	46.27 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	14.93 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	14.93 %
Rhodoplanes sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp.	0.75 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.75 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_104374539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	604	Open in IMG/M
3300002917\|JGI25616J43925_10157651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	903	Open in IMG/M
3300004006\|Ga0055453_10040261	All Organisms → cellular organisms → Bacteria	1244	Open in IMG/M
3300005168\|Ga0066809_10040713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1014	Open in IMG/M
3300005172\|Ga0066683_10362034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	899	Open in IMG/M
3300005332\|Ga0066388_105456065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	644	Open in IMG/M
3300005363\|Ga0008090_10187887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	848	Open in IMG/M
3300005468\|Ga0070707_100759327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	933	Open in IMG/M
3300005518\|Ga0070699_100310578	All Organisms → cellular organisms → Bacteria	1415	Open in IMG/M
3300005713\|Ga0066905_100154834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1656	Open in IMG/M
3300005713\|Ga0066905_101794849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	566	Open in IMG/M
3300005764\|Ga0066903_103348940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	865	Open in IMG/M
3300005764\|Ga0066903_103631329	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300005764\|Ga0066903_106305277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	619	Open in IMG/M
3300005764\|Ga0066903_107060249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	582	Open in IMG/M
3300006058\|Ga0075432_10389957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	599	Open in IMG/M
3300006178\|Ga0075367_11005470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	532	Open in IMG/M
3300006574\|Ga0074056_11634902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	808	Open in IMG/M
3300006800\|Ga0066660_10052691	All Organisms → cellular organisms → Bacteria	2667	Open in IMG/M
3300006800\|Ga0066660_11059032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	646	Open in IMG/M
3300006854\|Ga0075425_102955430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	521	Open in IMG/M
3300006865\|Ga0073934_10340835	All Organisms → cellular organisms → Bacteria	942	Open in IMG/M
3300006904\|Ga0075424_100468819	All Organisms → cellular organisms → Bacteria → Proteobacteria	1344	Open in IMG/M
3300006953\|Ga0074063_10129788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	518	Open in IMG/M
3300006953\|Ga0074063_10133367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	566	Open in IMG/M
3300007255\|Ga0099791_10031470	All Organisms → cellular organisms → Bacteria	2330	Open in IMG/M
3300009792\|Ga0126374_10464519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	903	Open in IMG/M
3300009792\|Ga0126374_10582080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	823	Open in IMG/M
3300010043\|Ga0126380_10257987	All Organisms → cellular organisms → Bacteria	1212	Open in IMG/M
3300010043\|Ga0126380_12049346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	525	Open in IMG/M
3300010047\|Ga0126382_10140847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1635	Open in IMG/M
3300010337\|Ga0134062_10188352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	935	Open in IMG/M
3300010359\|Ga0126376_12768345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	540	Open in IMG/M
3300010360\|Ga0126372_11796425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	656	Open in IMG/M
3300010360\|Ga0126372_11880121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	643	Open in IMG/M
3300010361\|Ga0126378_13226579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	519	Open in IMG/M
3300010366\|Ga0126379_12089623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	668	Open in IMG/M
3300010398\|Ga0126383_13260200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	530	Open in IMG/M
3300011119\|Ga0105246_11748456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	592	Open in IMG/M
3300012203\|Ga0137399_10369680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp.	1193	Open in IMG/M
3300012360\|Ga0137375_10668964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	853	Open in IMG/M
3300012910\|Ga0157308_10291430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	594	Open in IMG/M
3300012924\|Ga0137413_11245607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	595	Open in IMG/M
3300012929\|Ga0137404_12115945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	526	Open in IMG/M
3300012958\|Ga0164299_10981734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	620	Open in IMG/M
3300012971\|Ga0126369_12616083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	589	Open in IMG/M
3300012987\|Ga0164307_10216765	All Organisms → cellular organisms → Bacteria → Proteobacteria	1314	Open in IMG/M
3300015373\|Ga0132257_100645056	All Organisms → cellular organisms → Bacteria → Proteobacteria	1312	Open in IMG/M
3300016270\|Ga0182036_10287936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1245	Open in IMG/M
3300016294\|Ga0182041_11750042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	576	Open in IMG/M
3300016319\|Ga0182033_10333636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1263	Open in IMG/M
3300016341\|Ga0182035_11074010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	716	Open in IMG/M
3300016357\|Ga0182032_10254131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1367	Open in IMG/M
3300016371\|Ga0182034_10019875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	3994	Open in IMG/M
3300016371\|Ga0182034_11013405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	717	Open in IMG/M
3300016387\|Ga0182040_10582759	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	904	Open in IMG/M
3300016404\|Ga0182037_10514711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1005	Open in IMG/M
3300016404\|Ga0182037_11806772	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300016445\|Ga0182038_10183619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1631	Open in IMG/M
3300016445\|Ga0182038_10313442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1287	Open in IMG/M
3300017792\|Ga0163161_11817504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	542	Open in IMG/M
3300018076\|Ga0184609_10559247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	516	Open in IMG/M
3300018078\|Ga0184612_10631356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	504	Open in IMG/M
3300020005\|Ga0193697_1021918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1588	Open in IMG/M
3300021339\|Ga0193706_1205678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	531	Open in IMG/M
3300022694\|Ga0222623_10287156	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300025915\|Ga0207693_11044023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	622	Open in IMG/M
3300025920\|Ga0207649_10544104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	887	Open in IMG/M
3300025922\|Ga0207646_11275530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	642	Open in IMG/M
3300025944\|Ga0207661_10479709	All Organisms → cellular organisms → Bacteria → Proteobacteria	1135	Open in IMG/M
3300025972\|Ga0207668_10703192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	888	Open in IMG/M
3300026067\|Ga0207678_11852210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	527	Open in IMG/M
3300026538\|Ga0209056_10035246	All Organisms → cellular organisms → Bacteria	4659	Open in IMG/M
3300026990\|Ga0207824_1027005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	609	Open in IMG/M
3300027654\|Ga0209799_1022587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1382	Open in IMG/M
3300027654\|Ga0209799_1096338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	670	Open in IMG/M
3300027894\|Ga0209068_10490421	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300027903\|Ga0209488_10080551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2422	Open in IMG/M
3300028708\|Ga0307295_10031199	All Organisms → cellular organisms → Bacteria → Proteobacteria	1338	Open in IMG/M
3300028718\|Ga0307307_10014995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2099	Open in IMG/M
3300028754\|Ga0307297_10099967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	952	Open in IMG/M
3300028754\|Ga0307297_10326623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	557	Open in IMG/M
3300028811\|Ga0307292_10392988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	589	Open in IMG/M
3300028876\|Ga0307286_10108749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	977	Open in IMG/M
3300028889\|Ga0247827_10612151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	699	Open in IMG/M
3300031152\|Ga0307501_10270885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	513	Open in IMG/M
3300031549\|Ga0318571_10173513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	757	Open in IMG/M
3300031564\|Ga0318573_10162334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1175	Open in IMG/M
3300031668\|Ga0318542_10067145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1670	Open in IMG/M
3300031679\|Ga0318561_10182014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1136	Open in IMG/M
3300031682\|Ga0318560_10397668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	745	Open in IMG/M
3300031719\|Ga0306917_11201938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	588	Open in IMG/M
3300031720\|Ga0307469_10967667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	793	Open in IMG/M
3300031724\|Ga0318500_10338428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	742	Open in IMG/M
3300031740\|Ga0307468_100711564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	841	Open in IMG/M
3300031740\|Ga0307468_102226600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	531	Open in IMG/M
3300031744\|Ga0306918_10333356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1174	Open in IMG/M
3300031748\|Ga0318492_10589081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	593	Open in IMG/M
3300031764\|Ga0318535_10504101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	538	Open in IMG/M
3300031768\|Ga0318509_10444948	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300031769\|Ga0318526_10384750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	573	Open in IMG/M
3300031771\|Ga0318546_11344539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	502	Open in IMG/M
3300031781\|Ga0318547_10961072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	534	Open in IMG/M
3300031796\|Ga0318576_10114070	All Organisms → cellular organisms → Bacteria	1242	Open in IMG/M
3300031819\|Ga0318568_10237349	All Organisms → cellular organisms → Bacteria	1128	Open in IMG/M
3300031845\|Ga0318511_10333939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	688	Open in IMG/M
3300031846\|Ga0318512_10023716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2563	Open in IMG/M
3300031846\|Ga0318512_10132486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1193	Open in IMG/M
3300031846\|Ga0318512_10192469	All Organisms → cellular organisms → Bacteria	995	Open in IMG/M
3300031893\|Ga0318536_10402566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	691	Open in IMG/M
3300031894\|Ga0318522_10274936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	638	Open in IMG/M
3300031896\|Ga0318551_10636093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	616	Open in IMG/M
3300031896\|Ga0318551_10932486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	507	Open in IMG/M
3300031910\|Ga0306923_10129340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2872	Open in IMG/M
3300031943\|Ga0310885_10075089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1476	Open in IMG/M
3300031946\|Ga0310910_10328400	All Organisms → cellular organisms → Bacteria	1206	Open in IMG/M
3300031947\|Ga0310909_11467906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	544	Open in IMG/M
3300031954\|Ga0306926_12535968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	561	Open in IMG/M
3300031981\|Ga0318531_10225354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	845	Open in IMG/M
3300032009\|Ga0318563_10564069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	614	Open in IMG/M
3300032009\|Ga0318563_10668540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	558	Open in IMG/M
3300032010\|Ga0318569_10098373	All Organisms → cellular organisms → Bacteria	1320	Open in IMG/M
3300032025\|Ga0318507_10025000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2166	Open in IMG/M
3300032025\|Ga0318507_10197331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	868	Open in IMG/M
3300032025\|Ga0318507_10332415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	661	Open in IMG/M
3300032041\|Ga0318549_10468333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	567	Open in IMG/M
3300032044\|Ga0318558_10059218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1715	Open in IMG/M
3300032059\|Ga0318533_10399855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1003	Open in IMG/M
3300032064\|Ga0318510_10489622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	532	Open in IMG/M
3300032066\|Ga0318514_10163355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1158	Open in IMG/M
3300032067\|Ga0318524_10466247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	661	Open in IMG/M
3300032075\|Ga0310890_10670848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	809	Open in IMG/M
3300032076\|Ga0306924_10000999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	25223	Open in IMG/M
3300032090\|Ga0318518_10127316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1285	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.54%
Host-Associated	Host-Associated	7.46%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.06%
Plants	Host-Associated → Plants	7.46%
Aquatic	Environmental → Aquatic	4.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.06%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.22%
Sediment	Environmental → Aquatic → Sediment	2.99%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.49%
Marine	Environmental → Aquatic → Marine	0.75%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.75%
Roots	Host-Associated → Plants → Roots	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.87%
Loam	Environmental → Terrestrial → Soil → Loam	11.19%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.99%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.99%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.24%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.75%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.75%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.75%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.75%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	43.28%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.12%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.46%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.73%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.99%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.99%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.24%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.24%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.75%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	0.75%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	28.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.46%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.99%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.99%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.24%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.24%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.49%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.49%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.75%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	0.75%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.75%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.75%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.75%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.75%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004006	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006865	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300021339	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c1	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026990	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 73 (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1043745391	3300000364	Soil	MPNEPNARARVVDFHAHVVVPEIYAVAAAHNVFAELPTDPGVTDEMRAKIK
JGI25616J43925_101576511	3300002917	Grasslands Soil	MTSSSRARPRAIDFHAHVIVPEVYALAAQHNIFSELPTDPGVTDDMRKSIKARA
Ga0055453_100402612	3300004006	Natural And Restored Wetlands	MTETSATTGGSRRPVIDFHAHILVPEVYGVAAEHNIFSELPTDPGVTDEMR
Ga0066809_100407132	3300005168	Soil	MTSNLPARPHVIDFHAHVIVPEVYAVAAEHNIFSELPVDPGVTDEMRNQIKGRAG
Ga0066683_103620343	3300005172	Soil	MTSGASSRARLRAIDLHAHVIVPEVCALAAQHNVFSELPTDPGVTDEMRRNI
Ga0066388_1054560651	3300005332	Tropical Forest Soil	MTSSSRARPRAIDFHAHIIVPEVYALAAQHNIFSELPTDPGVTDDM
Ga0008090_101878871	3300005363	Tropical Rainforest Soil	MTSPGRARPRAIDFHAHVIVPEVYAVAAQHNIFSELPTDGGVTDEMRRSIK
Ga0070707_1007593271	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MTSQTRARAIDFHAHVIVPEVYAVAAEHNIFSELPTDPGVTDAMRDAIKQRAG
Ga0070699_1003105783	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MTSSSRARPRAIDFHAHVIVPEVYALAAQHNIFSELPTDPGVTDDMRKSIKARAA
Ga0066905_1001548344	3300005713	Tropical Forest Soil	MTDTSSAQSRPRAIDVHAHIIVPEVYAVAAGHNIFSELPTDPGVTDAMRDKIKERA
Ga0066905_1017948492	3300005713	Tropical Forest Soil	MNSSREARPRVIDVHAHVIVPEVYAVAAEHNVFSELPNDPGVTDEMRGQIKERAKTVLGRMSDLSER
Ga0066903_1033489401	3300005764	Tropical Forest Soil	MTSSSRARARAIDFHAHIIVPEVYALAAEHNIFSELPTDPGVTDEMRS
Ga0066903_1036313292	3300005764	Tropical Forest Soil	MTSSSSSHARRRIIDFHAHVVVPEVYELAAEHNVFSELPTDPGVTDEMREGVRKRAK
Ga0066903_1063052772	3300005764	Tropical Forest Soil	MTSSSRARPRAIDFHAHIIVPEVYALAAQHNIFSELPTDPGVTDDMRG
Ga0066903_1070602491	3300005764	Tropical Forest Soil	MADNSTNGAGGIDVHAHVIVPEVYALAAEHNIFAELPTDPGVTEEMRNQNRGRAGAVLGRMSDIDDRIS
Ga0075432_103899571	3300006058	Populus Rhizosphere	MTTNPPVRRHAIDFHAHVIVPEVYAVAAEHNIFSELPVDPGVTDEMR
Ga0075367_110054701	3300006178	Populus Endosphere	MTSNLPARPHVIDFHAHVIVPEVYAVAAEHNIFSELPVDPGVTDEMRNQIKGRAGTVLARMSDV
Ga0074056_116349021	3300006574	Soil	MTSNLPARPHVIDFHAHVIVPEVYAVAAEHNIFSELPVDPGVTDEMRNQIKGRAGTVLARMSDASERI
Ga0066660_100526914	3300006800	Soil	MSSESSHSVRAIDVHAHVVVPEVYALAAEHNIFSELPTDAGVSDEMRANIKERAGMVLRRMS
Ga0066660_110590322	3300006800	Soil	MTSGASSRARLRAIDLHAHVIVPEVCALAAQHNVFSELPTDPGVT
Ga0075425_1029554302	3300006854	Populus Rhizosphere	MTSSSRARPRAIDFHAHVIVPEVYALAAQHNIFSELPTDPGVTDDMRKSIKARAV
Ga0073934_103408353	3300006865	Hot Spring Sediment	MTEISGNGNPRRPVIDFHAHILVPEVYAVAARHNIFSELPTDPGVTEEMR
Ga0075424_1004688191	3300006904	Populus Rhizosphere	MTSNPPSLDGRRRARAIDFHAHVIVPEVYAVAAEHNIFSELPTDPGVTDEMRSQIKGRAGMVLARMS
Ga0074063_101297881	3300006953	Soil	MTSSSRARPRAIDFHAHVIVPEVYALAAQHNIFSELPTDPGVTDDMRKSIKARAATVL
Ga0074063_101333672	3300006953	Soil	MTSSSRARPRAIDFHAHIIVPEVYALAAQHNIFSELPTDPGVTDDMRKSIKARAATVL
Ga0099791_100314701	3300007255	Vadose Zone Soil	MTSSSRARPRAIDFHAHVIVPEVYAVAAEHNIFSELPTDPGVTDEMRSQIKGRAGMVLARMSDISDRI
Ga0126374_104645192	3300009792	Tropical Forest Soil	MNSPSEPRPRAIDVHAHVIVPEVYAVAAEHNVFSELPTDPGVTDEMRGQIKERAKIVLGRMS
Ga0126374_105820801	3300009792	Tropical Forest Soil	MTSSSRARPRAIDFHAHVIVPEVYALAAEHNIFSELPTDPGVTD
Ga0126380_102579872	3300010043	Tropical Forest Soil	MTDTSSAQSRPRAIDVHAHIIVPEVYAVAAGHNIFSELPTDPGVTDAMRD
Ga0126380_120493461	3300010043	Tropical Forest Soil	MTDSSSQSRPRAIDIHAHVIVPEVYAVAAEHNIFSELPTDPGVTDEMRAKIKERAGTV
Ga0126382_101408474	3300010047	Tropical Forest Soil	MTSSSRARLRAIDFHAHIIVPEVYALAAQHNIFSELPTDPGVTDDMRKSIKARAAT
Ga0134062_101883521	3300010337	Grasslands Soil	MPLSNRARPRAVDFHAHVIVPEVYALAAQHNIFSELPTDPGVTDEMRRSIRDRAATVVARMSD
Ga0126376_127683452	3300010359	Tropical Forest Soil	MTDTSSAQSRPRAIDVHAHIIVPEVYAVAAEHNIFSELPTDPGVTDAMRDKIKERAGTVLARMSD
Ga0126372_117964252	3300010360	Tropical Forest Soil	MTSSSRARSRAIDFHAHIIVPEVYALAAQHNIFSELPTDPGVTDDMRGS
Ga0126372_118801212	3300010360	Tropical Forest Soil	MTSSSRARPRAIDFHAHIIVPEVYALAAQHNIFSELPTDPGVTD
Ga0126378_132265791	3300010361	Tropical Forest Soil	MSRDDKSLQMTGSSSPPERRRTIDFHAHVVVPEVYELAGGHNVFSELPADPGVTD
Ga0126379_120896232	3300010366	Tropical Forest Soil	MTSSSRARSRAIDFHAHIIVPEVYALAAQHNIFSELPTDPGVTDDMRGSIKARA
Ga0126383_132602002	3300010398	Tropical Forest Soil	MTSSSRARSRAIDFRAHIIVPEVYALAAQHNIFSELPTDPGVTDDMRGS
Ga0105246_117484561	3300011119	Miscanthus Rhizosphere	MTPKPPARPHAIDFHAHVIVPEVYAVAAEHNIFSELPVDPGVTDEMRNQIKG
Ga0137399_103696801	3300012203	Vadose Zone Soil	MTSSSRARPRAIDFHAHVIVPEVYAVAAEHNIFSELPTDPGVTDEMRDAIKGRAGQVLARMSDLTER
Ga0137375_106689641	3300012360	Vadose Zone Soil	MPLASRARPRAVDFHAHVIVPEVYALAAQHNIFSELPTDPGVTDE
Ga0157308_102914302	3300012910	Soil	MTSNLPARPHVIDFHAHVIVPEVYAVAAEHNIFSELPVDPGVTDEM
Ga0137413_112456072	3300012924	Vadose Zone Soil	MTSNPPARPHVIDFHAHVIVPEVYAVAAEHNIFSELPADAGVTNEMRNRIKDRAGTVLARMS
Ga0137404_121159451	3300012929	Vadose Zone Soil	MPLSSRARPRAVDFHAHVIVPEVYALAAQHNIFSELPTDPGVTDEVRRSIRDRAATVVAR
Ga0164299_109817342	3300012958	Soil	MTSNPPARPRAIDFHAHVIVPEVYAVAAEHNIFSELHTDPCVTD*
Ga0126369_126160832	3300012971	Tropical Forest Soil	MTSSSRARPRAIDFHAHVIVPEVYALAAEHNIFSELPTDPGVTDEMRSRIKDRAATVLARMSDLTDR
Ga0164307_102167651	3300012987	Soil	MTNNPQARPHTIDFHAHIIVPEVYAVAAEHNIFSELPVDPGVTDEMRNQIK
Ga0132257_1006450562	3300015373	Arabidopsis Rhizosphere	MTSNPPSLDGRRRARAIDFHAHVIVPEVYAVAAEHNIFSELPSDPGVTDEMRSQIKGRAGMVLARM
Ga0182036_102879363	3300016270	Soil	MTSSSRARPRAIDFHAHIIVPEVYALAAQHNIFSELPTDPGVTDDMRKSIKAR
Ga0182041_117500421	3300016294	Soil	MTSSSRARPRAIDFHAHVIVPEVYALAAQHNIFSELPTDPGVTDDMRR
Ga0182033_103336361	3300016319	Soil	MTSSSRARPRAIDFHAHLIVPEVYALAAQHNIFSELPTDPGVTDDMRRSINSRAATVLARTSDLTDRIVNMD
Ga0182035_110740102	3300016341	Soil	MTSSSRARPRAIDFHAHIIVPEVYALAAQHNIFSELPTDPGVTDDMRKSIK
Ga0182032_102541313	3300016357	Soil	MTSSSRARPRAIDFHAHIIVPEVYALAAPHNIFSELPTDPGVTDDMRKSIKARAATVLAR
Ga0182034_100198755	3300016371	Soil	MMSRDDKSLQMTGSSSPPERRRTIDFHAHVVVPEVYELAGMHNVFSELPADPGVTDEMCEGIKARARL
Ga0182034_110134052	3300016371	Soil	MTSSSRARPRAIDFHAHIIVPEVYALAVPHNIFSELPTDPGVTDDMRKS
Ga0182040_105827591	3300016387	Soil	MTSSSRARPRAIDFHAHVIVPEVYALAAEHNIFSELPTDPGVTDDMRSRIKDRAATVLARMSDLT
Ga0182037_105147113	3300016404	Soil	MTSSSRARPRAIDFHAHIIVPEVYALAAPHNIFSELPTDPGVTDDMRKSIKARAATVLARMSDLTDRI
Ga0182037_118067721	3300016404	Soil	MTSSSSSHARRRVIDFHAHVVVPQVYELAAEHNVFSELPTDPGVTDEMREGIRTRAK
Ga0182038_101836191	3300016445	Soil	MTSSSRARPRAIDFHAHIIVPEVYALAVPHNIFSELPTDPGVTDDMRKSIKA
Ga0182038_103134421	3300016445	Soil	MTSSSRARSRAIDFHAHIIVPEVYALAAQHNIFSELPTDPGVTDDMRGSIKARAAAV
Ga0163161_118175041	3300017792	Switchgrass Rhizosphere	MTSNPPARPHVIDFHAHVIVPEVYAVAAEHNIFSELPADPGVTDEMRNQIKGRAGT
Ga0184609_105592472	3300018076	Groundwater Sediment	MTSNPPARPRAIDFHAHVIVPEVYALAAEHNIFSELPVDPGVTDEMRNQIKGRAGTVLARMSDVS
Ga0184612_106313562	3300018078	Groundwater Sediment	MTETSSSTTRSRAPAADVHAHIIVPEVYAVAAEHNVFSELPTDPGVTE
Ga0193697_10219181	3300020005	Soil	MTSNPPARPHVIDFHAHVIVPEVYAVAAEHNIFSELPVDPGVTDEMRNQIKGRAGTVLARMSDVA
Ga0193706_12056781	3300021339	Soil	MTSNPPARPHVIDFHAHVIVPEVYAVAAEHNIFSELPVDPGVTDEMRNQIKG
Ga0222623_102871561	3300022694	Groundwater Sediment	MTETSSSAARSRAPAIDVHAHIIVPQVYAVAAEHNIFSELPTDPGVTDEMRQKI
Ga0207693_110440232	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MTSNLPARPHVIDFHAHVIVPEVYAVAAEHNIFSELPVDPGVTDEMRNQIKGRA
Ga0207649_105441042	3300025920	Corn Rhizosphere	MTSNLPARPHVIDFHAHVIVPEVYAIAAEHNIFSELPVDPGVTDEMRNQIKG
Ga0207646_112755303	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTSSSRARPRAIDFHAHVIVPEVYALAAQHNIFSELPTDPGVTDDMRKSIKARAVT
Ga0207661_104797091	3300025944	Corn Rhizosphere	MTSNPPSLDGRRRARAIDFHAHVIVPEVYAVAAEHNIFSELPTDPGVTDEMRSQIKGRA
Ga0207668_107031921	3300025972	Switchgrass Rhizosphere	MTSNLPARPHVIDFHAHVIVPEVYAVAAEHNIFSELPVDPGVTDEMRNQIKGRAGTVLA
Ga0207678_118522101	3300026067	Corn Rhizosphere	MTSNPPARPHVIDFHAHVIVPEVYAVAAEHNIFSELPADPGVTDEMRNQIKGRAGTVLARMS
Ga0209056_100352461	3300026538	Soil	MTSGASSRARLRAIDLHAHVIVPEVCALAAQHNVFSELPTDPGVTDEMRRNIKERAATVLARMSDVT
Ga0207824_10270052	3300026990	Tropical Forest Soil	MTGSSSPGERQRTIDFHAHVVVPEVYELAGEHNVFSELPADPGVSDEMREGIKARARLVLGR
Ga0209799_10225871	3300027654	Tropical Forest Soil	MTSSSRARPRAIDFHAHIIVPEVYALAAEHNIFSELPTDPGVTDEMRS
Ga0209799_10963381	3300027654	Tropical Forest Soil	MTSSSRARPRAIDFHAHIIVPEVYALAAEHNIFSELPTDPGVTDEMRSRI
Ga0209068_104904211	3300027894	Watersheds	MTEVSEKDKSGRARPRVIDFHAHILVPEVYTVAAEHNIFSELPTDPGVTDEMRDKIRERAGLVLGRMSDLTDRLAKMD
Ga0209488_100805511	3300027903	Vadose Zone Soil	MASNSSQTRPRAIDFHAHIIVPEVYAVAAEHNIFSELPTDPGVTDAMRNAVKERAGTVLG
Ga0307295_100311992	3300028708	Soil	MTSNPPARPHVIDFHAHVIVPEVYAVAAEHNIFSELPVDPGVTDEMRNQIKGRAG
Ga0307307_100149953	3300028718	Soil	MTSNPPARPRAIDFHAHVIVPEVYAVAAEHNIFSELPTDPGVTDEMRSQIKGRAGM
Ga0307297_100999672	3300028754	Soil	MPSNPPARPRTIDFHAHVIVPEVYAVAAEHNIFSELPTDPGVTDEMRSQIKGRAGTV
Ga0307297_103266232	3300028754	Soil	MTSNLPARPHVIDFHAHVIVPEVYAVAAEHNIFSELPVDPGVTDEMRNQIKGRAGTVLARMSD
Ga0307292_103929881	3300028811	Soil	MTSNPPARPHVIDFHAHVIVPEVYAVAAEHNIFSELPVDPGVTDEMRNQIKGRAGTVLARMSDVAE
Ga0307286_101087492	3300028876	Soil	MTSNPPARPRAIDFHAHVIVPEVYAVAAEHNIFSELPTDPGVTDEMRSQIKGRAG
Ga0247827_106121511	3300028889	Soil	MTSNLPARPHVIDFHAHVIVPEVYAVAAEHNIFSELPVDPGVTDEMRNQ
Ga0307501_102708852	3300031152	Soil	MTSNPPARPHVIDFHAHVIVPEVYAVAAEHNIFSELPVDPGVTDEMRNQ
Ga0318571_101735131	3300031549	Soil	MTSSSRARPRAIDFHAHIIVPEVYALAAQHNIFSELPTDPGVTDDMRGSIKARAVTVLARMSD
Ga0318573_101623341	3300031564	Soil	MTSSSRARPRAIDFHAHIIVPEVYALAAQHNIFSELPTDPGVTDDMRKSIKARAATVLARMSDLT
Ga0318542_100671451	3300031668	Soil	MSGESSDVASVRAIDVHAHIVVPEVYALAAEHNIFSELPSDPGVTDEIRAKIKERAGMVLRRMSDV
Ga0318561_101820143	3300031679	Soil	MTSSSRARSRAIDFHAHIIVPEVYALAAQHNIFSELPTDPRVTDDMRGSIKA
Ga0318560_103976681	3300031682	Soil	MTSSSRARSRAIDFHAHIIVPEVYALAAQHNIFSELPTDPGVTDDMRGSIKARAAAVL
Ga0306917_112019383	3300031719	Soil	MTSSSRARPRAIDFHAHIIVPEVYALAAQHNIFSELPTDPGVTDDMRRSIKARAATVLARMSDLTDR
Ga0307469_109676671	3300031720	Hardwood Forest Soil	MTSNLPARPHVIDFHAHVIVPEVYAVAAEHNIFSELPVDPGVTDEMRNQIKGRAGTV
Ga0318500_103384281	3300031724	Soil	MTSSSRARPRAIDFHAHVIVPEVYALAAQHNIFSELPTDPGVTDDMRKSIKARAATVLTRMS
Ga0307468_1007115641	3300031740	Hardwood Forest Soil	MNSSREARPRAIDVHAHVIVPEVYAVAAEHNVFSELPTDPGVTDEMRGQIKERAKVVLSRMSDLSERVA
Ga0307468_1022266001	3300031740	Hardwood Forest Soil	MNSVRETKSPVIDFHAHILVPEVYAVAAEHNIFSELPTDPGVTDAMRDKIKERAGAVVARMSELTERVTKM
Ga0306918_103333563	3300031744	Soil	MTSSSRARPRAIDFHAHVIVPEVYALAAQHNIFSELPTDPGVTDDMRKSI
Ga0318492_105890812	3300031748	Soil	MTSSSRARPRAIDFHAHIIVPEVYALAAQHNIFSELPTDPGVTDDMRGSIKA
Ga0318535_105041012	3300031764	Soil	MTSSSSSHARRRVIDFHAHVVVPQVYELAAEHNVFSELPTDPGVTDEMREGIRTRAKLVLGRMSDISERIGR
Ga0318509_104449481	3300031768	Soil	MTSSSSSHARRRVIDFHAHVVVPQVYELAAEHNVFSELPTDPGVTDEMREGIRTRAKLVLGRMSDISERIGRMDA
Ga0318526_103847501	3300031769	Soil	MTSSSRARPRTIDFHAHIIVPEVYALAAEHNIFSELPTDPGVTDEMRSRIKDRAAVVLARMSDLTDRIVNM
Ga0318546_113445392	3300031771	Soil	MTSSSRARPRAIDFHAHIIVPEVYALAAQHNIFSELPTDPGVTDDMRKSIKARAATVLA
Ga0318547_109610721	3300031781	Soil	MTSSSRARPRAIDFHAHVIVPEVYALAAQHNIFSELPTDPGVTDDMRKS
Ga0318576_101140704	3300031796	Soil	MTSSSRARPRAIDFHAHIIVPEVYALAAQHNIFSELPTDPGVTDDMRRSIKARAATVLARMSDLTDRIVN
Ga0318568_102373491	3300031819	Soil	MTSSSSSHARRRVIDFHAHVVVPQVYELAAEHNVFSELPTDPGVTDEMREGIRTRAKLVLGRMSDISERI
Ga0318511_103339393	3300031845	Soil	MTSSSRARPRAIDFHAHIIVPEVYALAAQHNIFSELPTDPGVTDDMRRSINSRAATVLARMSDLT
Ga0318512_100237161	3300031846	Soil	MTSSSRARPRAIDFHAHIIVPEVYALAAQHNIFSELPTDPGVTDDMRRSINSRAATVLARMSDLTDRIV
Ga0318512_101324861	3300031846	Soil	MTSSSRARPRAIDFHAHIIVPEVYALAAQHNIFSELPTDPGVTDDMRRSIKARAATVLAR
Ga0318512_101924691	3300031846	Soil	MTGSSSPPERRRTIDFHAHVVVPEVYELAGGHNVFSELPADPGVTDEMRDGIKARARLVLGRMSDIGERIARMDAM
Ga0318536_104025661	3300031893	Soil	MTSSSRARPRAIDFHAHIIVPEVYALAAQHNIFSELPTDPGVTDD
Ga0318522_102749361	3300031894	Soil	MTSSSRARSRAIDFHAHIIVPEVYALAAQHNIFSELPTDPRVTDDMRGSIKARAAAVLTRMSDLTD
Ga0318551_106360932	3300031896	Soil	MTSSSRARSRAIDFHAHIIVPEVYALAAQHNIFSELPTDPGVTDDMRGSIKA
Ga0318551_109324861	3300031896	Soil	MTSSSRARPRAIDFHAHIIVPEVYALAAQHNIFSELPTDPGVTDDMRRSINSRAATVLARMSDLTDRIVNM
Ga0306923_101293404	3300031910	Soil	MTSSSSSHARRRVIDFHAHVVVPQVYELAAEHNVFSELPTDPGVT
Ga0310885_100750891	3300031943	Soil	MTSNLPARPHVIDFHAHVIVPEVYAVAAEHNIFSELPVDPGVTDEMRNQIKGRAGTVLARMSDVS
Ga0310910_103284004	3300031946	Soil	MTSSSRARPRAIDFHAHIIVPEVYALAAQHNIFSELPTDPGVTDDMRGS
Ga0310909_114679061	3300031947	Soil	MMSRDDKSLQMTGSSSPPERRRTIDFHAHVVVPEVYELAGMHNVFSELPADPGVTDEMCEGIKARARLVLG
Ga0306926_125359681	3300031954	Soil	MTGSSSPPERQRTIDFHAHVVVPEVYELAGGHNVFSELPADPGVTDEMRDGIKGRARLVLGRMSDIGERIARM
Ga0318531_102253541	3300031981	Soil	MTSSSRARPRAIDFHAHIIVPEVYALAAPHNIFSELPTDPGVTDDMRKSIKARAATVLARMSDLTD
Ga0318563_105640692	3300032009	Soil	MTSSSRARSRAIDFHAHIIVPEVYALAAQHNIFSELPTDPGVTDDMRG
Ga0318563_106685402	3300032009	Soil	MTSSSRARPRTIDFHAHIIVPEVYALAAEHNIFSELPTDPGVTDEMRSRIKD
Ga0318569_100983734	3300032010	Soil	MTSSSRARPRAIDFHAHIIVPEVYALAAQHNIFSELPTDPGVTDDMRRSIKARAATVLA
Ga0318507_100250003	3300032025	Soil	MTSSSRARSRAIDFHAHIIVPEVYALAAQHNIFSELPTDPGVTDDMRGSIK
Ga0318507_101973313	3300032025	Soil	MTSSSRAHPRAIDFHAHVIVPEVYALAAEHNIFSELPTDPGVTDEMRSRIKD
Ga0318507_103324153	3300032025	Soil	MTSPGRARPRAIDFHAHVIVPEVYAVAAQHNIFSELPTDGGVTDEMRRSIKD
Ga0318549_104683332	3300032041	Soil	MTSSSRARPRAIDFHAHVIVPEVYALAAQHNIFSELPTDPGVTDDMRKSIKA
Ga0318558_100592181	3300032044	Soil	MTSSSRARPRAIDFHAHIIVPEVYALAAQHNIFSELPTDPGVTDDMRGSIKARAVTV
Ga0318533_103998551	3300032059	Soil	MTSSSRARPRAIDFHAHVIVPEVYALAAQHNIFSELPTDPGVTDD
Ga0318510_104896221	3300032064	Soil	MTSSSSSHARRRVIDFHAHVVVPQVYELAAEHNVFSELPTDPGVTDEMREGIRTRAKLVLGRMS
Ga0318514_101633553	3300032066	Soil	MTSSSRARSRANDFHAHIIVPEVYALAAQHNIFSELPTDPGVTDDMRGSIKARAAAVL
Ga0318524_104662471	3300032067	Soil	MTGSSSPPERRRTIDFHAHVVVPEVYELAGGHNVFSELPADPGVTDEMRDGIKARARLVLGRMSDIGERIARMD
Ga0310890_106708482	3300032075	Soil	MTSNPPSLDGRRRARAIDFHAHVIVPEVYAVAAEHNIFSELPVDPGVTDEMRNQIKGRAG
Ga0306924_1000099921	3300032076	Soil	MTSSSSSHARRRVIDFHAHVVVPQVYELAAEHNVFSELPTDPGVTDEMREG
Ga0318518_101273163	3300032090	Soil	MTSSSRARPRAIDFHAHIIVPEVYALAAPHNIFSELPTDPGVTDDMRKSIKARAATVLARMSDLT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F059132

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences