Metagenome / Metatranscriptome Family F059111

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F059111
Family Type	Metagenome / Metatranscriptome
Number of Sequences	134
Average Sequence Length	73 residues
Representative Sequence	VTPNVRVWRVRKQHTWIDAQLRDRPDSAEVEIQFFYDGAMVFARSWPSREEALSHADDQLRDLQRAGWVTHW
Number of Associated Samples	105
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	59.09 %
% of genes near scaffold ends (potentially truncated)	20.90 %
% of genes from short scaffolds (< 2000 bps)	70.15 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.79

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (80.597 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (9.702 % of family members)
Environment Ontology (ENVO)	Unclassified (35.075 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (52.239 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 17.00% β-sheet: 34.00% Coil/Unstructured: 49.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.79
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.79
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SCOP family	SCOP domain	Representative PDB	TM-score
d.297.1.1: WGR domain-like	d2cr9a1	2cr9	0.72
d.297.1.1: WGR domain-like	d2cr9a1	2cr9	0.72
b.29.1.0: Concanavalin A-like lectins/glucanases	d4yg0a1	4yg0	0.66
b.29.1.0: Concanavalin A-like lectins/glucanases	d4yg0a1	4yg0	0.66
c.119.1.0: DAK1/DegV-like	d6noka1	6nok	0.64
b.29.1.0: Concanavalin A-like lectins/glucanases	d6ut9a1	6ut9	0.64
c.119.1.0: DAK1/DegV-like	d6noka1	6nok	0.64
b.29.1.0: Concanavalin A-like lectins/glucanases	d6ut9a1	6ut9	0.64
c.119.1.0: DAK1/DegV-like	d6alwa_	6alw	0.63
c.119.1.0: DAK1/DegV-like	d6alwa_	6alw	0.63

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF02321	OEP	37.31
PF00501	AMP-binding	19.40
PF13561	adh_short_C2	2.99
PF00486	Trans_reg_C	2.24
PF00190	Cupin_1	1.49
PF04052	TolB_N	1.49
PF07690	MFS_1	1.49
PF13193	AMP-binding_C	1.49
PF00464	SHMT	0.75
PF13091	PLDc_2	0.75
PF04464	Glyphos_transf	0.75
PF01564	Spermine_synth	0.75
PF13229	Beta_helix	0.75
PF02129	Peptidase_S15	0.75
PF05598	DUF772	0.75
PF01810	LysE	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	74.63
COG0823	Periplasmic component TolB of the Tol biopolymer transport system	Intracellular trafficking, secretion, and vesicular transport [U]	1.49
COG0112	Glycine/serine hydroxymethyltransferase	Amino acid transport and metabolism [E]	0.75
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.75
COG1887	CDP-glycerol glycerophosphotransferase, TagB/SpsB family	Cell wall/membrane/envelope biogenesis [M]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	80.60 %
Unclassified	root	N/A	19.40 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	80.60 %
Unclassified	root	N/A	19.40 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	80.60 %
Unclassified	root	N/A	19.40 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	57.46 %
Unclassified	root	N/A	19.40 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.40 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	8.21 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	2.99 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.40 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.46 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	2.99 %
Acidobacteria bacterium 13_1_40CM_4_65_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_65_8	0.75 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.40 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.46 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	2.99 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.75 %
Acidobacteria bacterium 13_1_40CM_4_65_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_65_8	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.40 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.46 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	2.99 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.75 %
Acidobacteria bacterium 13_1_40CM_4_65_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_65_8	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.40 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.46 %
unclassified Luteitalea	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea	2.99 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	0.75 %
Acidobacteria bacterium 13_1_40CM_4_65_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_65_8	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.40 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.46 %
Luteitalea sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	2.99 %
Stigmatella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella	0.75 %
Acidobacteria bacterium 13_1_40CM_4_65_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_65_8	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.40 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.46 %
Luteitalea sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	2.99 %
Stigmatella aurantiaca	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella → Stigmatella aurantiaca	0.75 %
Acidobacteria bacterium 13_1_40CM_4_65_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_65_8	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.40 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.46 %
Luteitalea sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	2.99 %
Stigmatella aurantiaca DW4/3-1	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella → Stigmatella aurantiaca → Stigmatella aurantiaca DW4/3-1	0.75 %
Acidobacteria bacterium 13_1_40CM_4_65_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_65_8	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004081\|Ga0063454_100182835	All Organisms → cellular organisms → Bacteria	1164	Open in IMG/M
3300004153\|Ga0063455_101430602	All Organisms → cellular organisms → Bacteria → Acidobacteria	535	Open in IMG/M
3300004156\|Ga0062589_100027023	All Organisms → cellular organisms → Bacteria	2853	Open in IMG/M
3300004463\|Ga0063356_105215904	All Organisms → cellular organisms → Bacteria → Acidobacteria	558	Open in IMG/M
3300004633\|Ga0066395_10849845	All Organisms → cellular organisms → Bacteria → Acidobacteria	550	Open in IMG/M
3300005172\|Ga0066683_10482866	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300005176\|Ga0066679_10513287	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300005186\|Ga0066676_10603863	All Organisms → cellular organisms → Bacteria → Acidobacteria	744	Open in IMG/M
3300005295\|Ga0065707_10321133	All Organisms → cellular organisms → Bacteria → Acidobacteria	966	Open in IMG/M
3300005328\|Ga0070676_10229532	All Organisms → cellular organisms → Bacteria → Acidobacteria	1230	Open in IMG/M
3300005338\|Ga0068868_101495663	All Organisms → cellular organisms → Bacteria → Acidobacteria	632	Open in IMG/M
3300005347\|Ga0070668_100057475	All Organisms → cellular organisms → Bacteria	3007	Open in IMG/M
3300005353\|Ga0070669_100487911	All Organisms → cellular organisms → Bacteria → Acidobacteria	1020	Open in IMG/M
3300005353\|Ga0070669_100804351	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300005367\|Ga0070667_102062753	All Organisms → cellular organisms → Bacteria → Acidobacteria	537	Open in IMG/M
3300005440\|Ga0070705_100169279	All Organisms → cellular organisms → Bacteria → Acidobacteria	1469	Open in IMG/M
3300005440\|Ga0070705_100555746	All Organisms → cellular organisms → Bacteria → Acidobacteria	881	Open in IMG/M
3300005471\|Ga0070698_100109007	All Organisms → cellular organisms → Bacteria	2736	Open in IMG/M
3300005518\|Ga0070699_101206028	All Organisms → cellular organisms → Bacteria → Acidobacteria	694	Open in IMG/M
3300005536\|Ga0070697_101403179	All Organisms → cellular organisms → Bacteria → Acidobacteria	624	Open in IMG/M
3300005545\|Ga0070695_101036400	All Organisms → cellular organisms → Bacteria → Acidobacteria	669	Open in IMG/M
3300005718\|Ga0068866_10055608	All Organisms → cellular organisms → Bacteria	2033	Open in IMG/M
3300005764\|Ga0066903_100052288	All Organisms → cellular organisms → Bacteria → Proteobacteria	4993	Open in IMG/M
3300005764\|Ga0066903_100206324	All Organisms → cellular organisms → Bacteria	2951	Open in IMG/M
3300005842\|Ga0068858_100155987	All Organisms → cellular organisms → Bacteria	2148	Open in IMG/M
3300005844\|Ga0068862_100225385	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1699	Open in IMG/M
3300006032\|Ga0066696_10358105	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
3300006046\|Ga0066652_101263064	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300006237\|Ga0097621_101663834	All Organisms → cellular organisms → Bacteria → Proteobacteria	607	Open in IMG/M
3300006844\|Ga0075428_100718169	All Organisms → cellular organisms → Bacteria	1064	Open in IMG/M
3300006881\|Ga0068865_102176835	All Organisms → cellular organisms → Bacteria → Acidobacteria	505	Open in IMG/M
3300009012\|Ga0066710_100686724	All Organisms → cellular organisms → Bacteria → Acidobacteria	1560	Open in IMG/M
3300009090\|Ga0099827_11835588	All Organisms → cellular organisms → Bacteria → Acidobacteria	528	Open in IMG/M
3300009093\|Ga0105240_11567813	All Organisms → cellular organisms → Bacteria → Acidobacteria	690	Open in IMG/M
3300009094\|Ga0111539_10836348	All Organisms → cellular organisms → Bacteria → Acidobacteria	1071	Open in IMG/M
3300009098\|Ga0105245_12881665	All Organisms → cellular organisms → Bacteria → Acidobacteria	533	Open in IMG/M
3300009137\|Ga0066709_101861680	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300009177\|Ga0105248_12080799	All Organisms → cellular organisms → Bacteria → Acidobacteria	645	Open in IMG/M
3300009177\|Ga0105248_12097545	All Organisms → cellular organisms → Bacteria → Acidobacteria	643	Open in IMG/M
3300009553\|Ga0105249_11708925	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	702	Open in IMG/M
3300009789\|Ga0126307_11414025	All Organisms → cellular organisms → Bacteria → Acidobacteria	564	Open in IMG/M
3300010037\|Ga0126304_10272822	All Organisms → cellular organisms → Bacteria → Acidobacteria	1116	Open in IMG/M
3300010321\|Ga0134067_10103336	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella → Stigmatella aurantiaca → Stigmatella aurantiaca DW4/3-1	977	Open in IMG/M
3300010336\|Ga0134071_10454543	All Organisms → cellular organisms → Bacteria → Acidobacteria	657	Open in IMG/M
3300010358\|Ga0126370_10808170	All Organisms → cellular organisms → Bacteria → Acidobacteria	837	Open in IMG/M
3300010399\|Ga0134127_11094657	All Organisms → cellular organisms → Bacteria → Acidobacteria	860	Open in IMG/M
3300010399\|Ga0134127_12346038	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	613	Open in IMG/M
3300010400\|Ga0134122_10252183	All Organisms → cellular organisms → Bacteria → Acidobacteria	1491	Open in IMG/M
3300010400\|Ga0134122_10569670	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1040	Open in IMG/M
3300010400\|Ga0134122_11134967	Not Available	777	Open in IMG/M
3300010401\|Ga0134121_11219526	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	753	Open in IMG/M
3300010403\|Ga0134123_10014086	All Organisms → cellular organisms → Bacteria → Proteobacteria	5528	Open in IMG/M
3300010403\|Ga0134123_13379748	All Organisms → cellular organisms → Bacteria → Acidobacteria	515	Open in IMG/M
3300010403\|Ga0134123_13502971	All Organisms → cellular organisms → Bacteria → Acidobacteria	508	Open in IMG/M
3300012208\|Ga0137376_10042138	All Organisms → cellular organisms → Bacteria	3697	Open in IMG/M
3300012362\|Ga0137361_10539021	All Organisms → cellular organisms → Bacteria → Acidobacteria	1071	Open in IMG/M
3300012469\|Ga0150984_121529459	All Organisms → cellular organisms → Bacteria → Acidobacteria	722	Open in IMG/M
3300012893\|Ga0157284_10124754	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	702	Open in IMG/M
3300012918\|Ga0137396_11103440	All Organisms → cellular organisms → Bacteria → Acidobacteria	567	Open in IMG/M
3300013306\|Ga0163162_10634316	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1193	Open in IMG/M
3300014326\|Ga0157380_11884818	All Organisms → cellular organisms → Bacteria → Acidobacteria	658	Open in IMG/M
3300018000\|Ga0184604_10005558	All Organisms → cellular organisms → Bacteria	2352	Open in IMG/M
3300018075\|Ga0184632_10279358	All Organisms → cellular organisms → Bacteria → Acidobacteria	725	Open in IMG/M
3300018469\|Ga0190270_10310910	All Organisms → cellular organisms → Bacteria	1410	Open in IMG/M
3300018476\|Ga0190274_10012635	All Organisms → cellular organisms → Bacteria → Proteobacteria	5294	Open in IMG/M
3300018476\|Ga0190274_10485031	All Organisms → cellular organisms → Bacteria → Acidobacteria	1230	Open in IMG/M
3300018482\|Ga0066669_11199715	All Organisms → cellular organisms → Bacteria → Acidobacteria	685	Open in IMG/M
3300020034\|Ga0193753_10241215	All Organisms → cellular organisms → Bacteria → Acidobacteria	808	Open in IMG/M
3300021080\|Ga0210382_10036058	All Organisms → cellular organisms → Bacteria	1885	Open in IMG/M
3300021080\|Ga0210382_10217267	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	832	Open in IMG/M
3300021080\|Ga0210382_10526969	All Organisms → cellular organisms → Bacteria → Acidobacteria	523	Open in IMG/M
3300021478\|Ga0210402_10416498	All Organisms → cellular organisms → Bacteria → Acidobacteria	1248	Open in IMG/M
3300021510\|Ga0222621_1074819	All Organisms → cellular organisms → Bacteria → Acidobacteria	715	Open in IMG/M
3300022756\|Ga0222622_10017333	All Organisms → cellular organisms → Bacteria	3593	Open in IMG/M
3300022756\|Ga0222622_10506979	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_65_8	863	Open in IMG/M
3300022756\|Ga0222622_10802040	All Organisms → cellular organisms → Bacteria → Acidobacteria	688	Open in IMG/M
3300025923\|Ga0207681_10843106	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	766	Open in IMG/M
3300025927\|Ga0207687_10066880	All Organisms → cellular organisms → Bacteria	2555	Open in IMG/M
3300025927\|Ga0207687_11321606	All Organisms → cellular organisms → Bacteria → Acidobacteria	620	Open in IMG/M
3300025927\|Ga0207687_11691869	All Organisms → cellular organisms → Bacteria → Acidobacteria	542	Open in IMG/M
3300025941\|Ga0207711_10406485	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1265	Open in IMG/M
3300025942\|Ga0207689_10386154	All Organisms → cellular organisms → Bacteria	1166	Open in IMG/M
3300025960\|Ga0207651_11136652	All Organisms → cellular organisms → Bacteria → Acidobacteria	700	Open in IMG/M
3300025981\|Ga0207640_11004754	All Organisms → cellular organisms → Bacteria → Acidobacteria	734	Open in IMG/M
3300025986\|Ga0207658_12174011	All Organisms → cellular organisms → Bacteria → Acidobacteria	504	Open in IMG/M
3300026089\|Ga0207648_10066899	All Organisms → cellular organisms → Bacteria → Acidobacteria	3133	Open in IMG/M
3300026121\|Ga0207683_12096762	All Organisms → cellular organisms → Bacteria → Acidobacteria	514	Open in IMG/M
3300026550\|Ga0209474_10192710	All Organisms → cellular organisms → Bacteria	1303	Open in IMG/M
3300027821\|Ga0209811_10365048	Not Available	559	Open in IMG/M
3300027909\|Ga0209382_10083027	All Organisms → cellular organisms → Bacteria	3773	Open in IMG/M
3300028380\|Ga0268265_10195362	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1751	Open in IMG/M
3300028380\|Ga0268265_10792690	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	923	Open in IMG/M
3300028708\|Ga0307295_10057106	All Organisms → cellular organisms → Bacteria	1013	Open in IMG/M
3300028717\|Ga0307298_10015784	All Organisms → cellular organisms → Bacteria → Acidobacteria	1926	Open in IMG/M
3300028718\|Ga0307307_10267265	All Organisms → cellular organisms → Bacteria → Acidobacteria	548	Open in IMG/M
3300028828\|Ga0307312_10047994	All Organisms → cellular organisms → Bacteria	2543	Open in IMG/M
3300028828\|Ga0307312_10469215	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	830	Open in IMG/M
3300028828\|Ga0307312_10540998	All Organisms → cellular organisms → Bacteria → Acidobacteria	770	Open in IMG/M
3300028884\|Ga0307308_10087089	All Organisms → cellular organisms → Bacteria → Acidobacteria	1483	Open in IMG/M
3300030997\|Ga0073997_10001351	All Organisms → cellular organisms → Bacteria	1144	Open in IMG/M
3300030997\|Ga0073997_11880592	All Organisms → cellular organisms → Bacteria → Acidobacteria	520	Open in IMG/M
3300030997\|Ga0073997_12092884	All Organisms → cellular organisms → Bacteria → Acidobacteria	527	Open in IMG/M
3300030997\|Ga0073997_12247917	All Organisms → cellular organisms → Bacteria → Acidobacteria	626	Open in IMG/M
3300030997\|Ga0073997_12260115	All Organisms → cellular organisms → Bacteria → Acidobacteria	828	Open in IMG/M
3300030997\|Ga0073997_12266019	All Organisms → cellular organisms → Bacteria → Acidobacteria	668	Open in IMG/M
3300030998\|Ga0073996_12169353	All Organisms → cellular organisms → Bacteria → Acidobacteria	515	Open in IMG/M
3300031366\|Ga0307506_10228956	All Organisms → cellular organisms → Bacteria → Acidobacteria	697	Open in IMG/M
3300031720\|Ga0307469_10400026	All Organisms → cellular organisms → Bacteria → Acidobacteria	1172	Open in IMG/M
3300032018\|Ga0315272_10297025	All Organisms → cellular organisms → Bacteria → Acidobacteria	784	Open in IMG/M
3300032163\|Ga0315281_11274504	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	730	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	62.69%
Host-Associated	Host-Associated	37.31%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.48%
Plants	Host-Associated → Plants	37.31%
Aquatic	Environmental → Aquatic	8.21%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	54.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere	24.63%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.94%
Sediment	Environmental → Aquatic → Sediment	4.48%
Freshwater	Environmental → Aquatic → Freshwater	3.73%
Roots	Host-Associated → Plants → Roots	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.79%
Loam	Environmental → Terrestrial → Soil → Loam	12.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.69%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.94%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.19%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.48%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.24%
Lake	Environmental → Aquatic → Freshwater → Lake	1.49%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.75%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.19%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.48%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.24%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.24%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.24%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.49%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.49%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.75%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.70%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	8.21%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.46%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	7.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.97%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.48%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.99%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.99%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.24%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.24%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.24%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.49%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.49%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.49%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.49%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.49%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.49%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.49%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.49%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.75%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.75%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.75%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.75%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.75%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020034	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030997	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030998	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300032018	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_middle	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
soilL2_100679582	3300003319	Sugarcane Root And Bulk Soil	VRDLAERLWRVRKNHTWIDAQVRADTAGAEVRFYYDGALVFAQRWPTRAEAIHCADGHLRELQRAGWVTHW*
Ga0063454_1001828352	3300004081	Soil	VPKLAERVWRVRKNHTWIDAQVQDAGDGCAVQFYYDGALLFARRWPSREQALAHAADQLSELQRAGWNTHW*
Ga0063455_1014306021	3300004153	Soil	VPKLAERVWRVRKNHTWIDAQVQDAGDGCAVQFFYDGALVFARRWPSREQALAHAADQLSELQRAGWNTHW*
Ga0062589_1000270232	3300004156	Soil	MIPRHLAERVWRVRRNHTSIDAQVRDCADASGAEVQFFYDGALVITRRWPSRAEALACAADQLLELQRAGWVTHW*
Ga0063356_1045242292	3300004463	Arabidopsis Thaliana Rhizosphere	MPGLAERIWRARKSHAWIDAQVRDCGDTPGAEVRFYYDGALVFAQRWATRDDAIRCANGHLKELQRAGWVTHW*
Ga0063356_1052159042	3300004463	Arabidopsis Thaliana Rhizosphere	MVPSDLAERVWRVRKNHTWIDAQVRDCVEPAGVEVRFFYDGSLVFAQRWTTREEALSCAAGHLRDLQRAGWVTHW*
Ga0066395_108498452	3300004633	Tropical Forest Soil	MTESARLWRVRKDHTWVDARIREGAEDKGVELQFFYDGALVVARKWPSRESALADADG
Ga0062594_1016693092	3300005093	Soil	MIRDGRSQGLGLARSVVTELAERIWRVRKNHTWIDAQVRADTAGAEVRFYYDGALVFAQRWPTRAEAIHCANGHLRELQRAGWVTHW*
Ga0066683_104828661	3300005172	Soil	HTWIDAQIRDCPESDEVEIRFFYDGALLLARRWPSREQARTHATDRLRDLQRVGWTTHW*
Ga0066679_105132872	3300005176	Soil	MSEPVRVWRARKDHTWVDARIRECRDADGVELQFFYDGALLVARKWPSRESALTEAEAQLRDLRRAGWNTHW*
Ga0066676_106038632	3300005186	Soil	MSEPVRVWRARKDHTWVDARIRECCDADGVELQFFYDGALVVARKWPSRESALTEAEQQLRDLQRAGWNTHW*
Ga0065707_103211332	3300005295	Switchgrass Rhizosphere	VSTLTTAGRVWRVRKNHTWIDAQIRDCPQSNDVEIRFFYDGALVLARRWPSRKKAMTHAEDQLRDLQRAGWNTHW*
Ga0070676_102295322	3300005328	Miscanthus Rhizosphere	MVPGDLAERVWRVRKNHTWIDAQVRDCVEPAGVEVRFFYDGSLVFAQRWTTREEALSCAAGHLRDLQRAGWVTHW*
Ga0070677_108005471	3300005333	Miscanthus Rhizosphere	GPGVDRPMIRDGRSQGLGLARSVVTELAERIWRVRKNHTWIDAQVRADTAGAEVRFYYDGALVFAQRWPTRAEAIHCANGHLRELQRAGWVTHW*
Ga0068868_1014956631	3300005338	Miscanthus Rhizosphere	MIAPKPAQRVWRVRKNHTWIDAQVLDEADTGAAEIRFYYDGALVFARRWPSRDAALTHADDQLRELQRTGWVTHW*
Ga0070691_100043875	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	DGRSQGLGLARSVVTELAERIWRVRKNHTWIDAQVRADTAGAEVRFYYDGALVFAQRWPTRAEAIHCANGHLRELQRAGWVTHW*
Ga0070687_1003451882	3300005343	Switchgrass Rhizosphere	GVDRPMIRDGRSQGLGLARSVVTELAERIWRVRKNHTWIDAQVRADTAGAEVRFYYDGALVFAQRWPTRAEAIHCANGHLRELQRAGWVTHW*
Ga0070692_113317421	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	WIDAQVRADTAGAEVRFYYDGALVFAQRWPTRAEAIHCANGHLRELQRAGWVTHW*
Ga0070668_1000574752	3300005347	Switchgrass Rhizosphere	MIPRHLAERVWRVRRNHTSIDAQVRDCADASGAEVQFFYDGALVITRRWPSRVEALACAADQLLELQRAGWVTHW*
Ga0070669_1004879111	3300005353	Switchgrass Rhizosphere	MIPRHLAERVWRVRRNHTSIDAQVRDCADASGVEVQFFYDGALVITRRWSSRTEALACAADRLLELQRAGWVTHW*
Ga0070669_1008043512	3300005353	Switchgrass Rhizosphere	MVPGDLAERVWRVRKNHTWIDAQVRDCVEPAGVEVRFFYDGSLVFAQRWTTREEALSCANGRLRDLQRAGWVTHW*
Ga0070673_1001148503	3300005364	Switchgrass Rhizosphere	ARSVVTELAERIWRVRKNHTWIDAQVRADTAGAEVRFYYDGALVFAQRWPTRAEAIHCASGHLRELQRAGWVTHW*
Ga0070667_1020627531	3300005367	Switchgrass Rhizosphere	MVPGDLAERVWRVRKNHTWIDAQVRDCVEPAGVEVRFFYDGSLVFAQRWTTREEALGCAAGHLRDLQRAGWVTHW*
Ga0070705_1001692791	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MIPPDLGERVWRVRKNHTWIDAQIRDCPQSTDVEIRFSYGGVLVLARRWPSRERAMTHAADQLGELQRAGWNTHW*
Ga0070705_1005557461	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VTPNVRVWRVRKQHTWIDAQLRDRPDSAEVEIQFFYDGAMVFARSWPSREEALSHADDQLRDLQRAGWVTHW*
Ga0070694_1002820311	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	VRELAERVWRARKSHAWIDAQVRDCGDTPGAEVRFYYDGALVFAQRWATRDDAIRCANGHLKELQRAGWVTHW*
Ga0068867_1000408401	3300005459	Miscanthus Rhizosphere	MIRDGRSQGLGLARSVVTELAERIWRVRKNHTWIDAQVRADTAGAEVRFYYDGALVFAQRWPTRAEAIHCANGHLREL
Ga0070698_1001090072	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MSEPVRVWRVRKDHTWVDARIRECRDAGGVELQFFYDGALMVARKWPSRESALTEAEQQLRDLQRAGWNTHW*
Ga0070699_1012060282	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	GIADVEPVRPPMTESVRVWRVRKDHTWVDAHIRECSGGDGVELQFFYDGALVCARKWPSRESALTEAEQQLRDLQRAGWNTHW*
Ga0070697_1014031792	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VTPNVRVWRVRKQHTWIDAQLRNRPDSTDVEIQFFYDGAMVFARSWPSREEALSHADDQLRDLQRAGWVTHW*
Ga0070686_1002753572	3300005544	Switchgrass Rhizosphere	MIRDGRSQGLGLARSVVTELAERIWRVRKNHTWIDAQVRADTAGAEVRFYYDGALVFAQRWPTRAEAIHCASGHLRELQRAGWVTHW*
Ga0070695_1010364002	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MIPPDLGERVWRVRKNHTWIDAQIRDCVESNHVELQFFYDGTLVFARRWPSREAALTHAGDRLRDLQRAGWNTHW*
Ga0070704_1000189161	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	RKNHTWIDAQVRADTAGAEVRFYYDGALVFAQRWPTRAEAIHCANGHLRELQRAGWVTHW
Ga0068854_1000112261	3300005578	Corn Rhizosphere	VDRPTIRDGRSQGLGLARSVVTELAERIWRVRKNHTWIDAQVRADTAGAEVRFYYDGALVFAQRWPTRAEAIHCANGHLRELQRAGWVTHW*
Ga0068866_100556082	3300005718	Miscanthus Rhizosphere	MIPRHLAERVWRVRRNHTSIDAQVRDCANASGAEVQFFYDGALVITRRWPSRVEALACAADQLLELQRAGWVTHW*
Ga0066903_1000522881	3300005764	Tropical Forest Soil	QSDGRGGDCGVAGAGADGIEPAGPSMTESARLWRVRKDHTWVDARIREGAEDKGVELQFFYDGALVVARKWPSRESALADADGQLRDLERAGWNTHW*
Ga0066903_1002063242	3300005764	Tropical Forest Soil	MTESSRLWRVRKDHTWVDARIRDCAGDEGSVELQFFYDGALLVARQWPSRDEALSEAEGQLRDLQRAGWNTHW*
Ga0068858_1001559872	3300005842	Switchgrass Rhizosphere	MANVRVWRVRKQHTWIDAQLRDRPDSSGVELQFFYDGAMVFARSWPSREEALREADGHLRDLQRAGWVTHW*
Ga0068862_1002253851	3300005844	Switchgrass Rhizosphere	RVRKNHTWIDAQVRQVPDSAAVELQFFYDGALVLARRWPSRERALSHAADQLRELQRVGWNTHW*
Ga0066696_103581052	3300006032	Soil	VSGARVSDLEPVRAAMSEPVRVWRARKDHTWVDARIRECRDADGVELQFFYDGALLVARKWPSRESALTEAEAQLRDLQRAGWNTHW*
Ga0066652_1012630642	3300006046	Soil	VTPNVRVWRVRKQHTWIDAHLCNRSESTEVEIQFFYDGAMVFARSWPSRKEALRHADDQLRDLQRAGWVTHW*
Ga0075422_102748392	3300006196	Populus Rhizosphere	RKSHAWIDAQVRDCGDSPGAEVRFYYDGALVLAQRWATRDDAIRCANGHLKELQRAGWVTHW*
Ga0097621_1016638342	3300006237	Miscanthus Rhizosphere	LIRQVAERVWRVRKNHTWIDAQVRQVPDSAAVELQFFYDGALVLARRWPSRERALSHAADQLRELQRVGWNTHW*
Ga0075428_1007181692	3300006844	Populus Rhizosphere	MLPSGLAERVWRVRKNHTWIDAQVRECAEPPGVEVRFFYDGSLVFAQRWLTRDEALGCAAVHLRDLQRAGWVTHW*
Ga0068865_1021768351	3300006881	Miscanthus Rhizosphere	MIPRHLAERVWRVRRNHTSIDAQVRDCADASGAEVQFFYDGALVIARRWPSRAEALACAADQLVELQRAG
Ga0066710_1006867242	3300009012	Grasslands Soil	MTEPVRVWRVRKDHTWVDARIRDCSGTAGVELQFFYDGALVCARTWPSRESAITAAEGQLRDLQRAGWNTHW
Ga0099827_118355882	3300009090	Vadose Zone Soil	VATERLWRVRKDHTWIDARIRDRAGTDEVELQFFYDGALVFARRWPSRQAALLDADGHLRDLQPAGWNAHW*
Ga0105240_115678131	3300009093	Corn Rhizosphere	VTPNVRLWRVRKQHTWIDAQLRDRPESTEVEIQFFYDGAMVFARSWPSREAALSHAGDQLRDLQRAGWVTHW*
Ga0111539_100100552	3300009094	Populus Rhizosphere	VRELAQRVWRARKSHAWIDAQVRDCGDSPGAEVRFYYDGALVLAQRWATRDDAIRCANGHLKELQRAGWVTHW*
Ga0111539_108363481	3300009094	Populus Rhizosphere	MVPGDLAERVWRVRKNHTWIDAQVRDCVEPAGVEVRFFYDGSLVFAQRWTTREEALGCAAGHL
Ga0105245_128816652	3300009098	Miscanthus Rhizosphere	MANVRVWRVRKQHTWIDAQLRDQPDSSGVELQFFYDGAMVFARSWPSREEALREADGQLRDLQRAGWVTH
Ga0066709_1018616802	3300009137	Grasslands Soil	SESCGGRRVSGARVSDLEPVRPAMSEPVRVWRARKDHTWVDARIRECLDADGVELQFFYDGALLVARTWPSRESALTEAEAQLRDLQRAGWNTHW*
Ga0075423_109581591	3300009162	Populus Rhizosphere	VRELAQRVWRARKSHAWIDAQVRDCGDSPGAEVRFYYDGALVLAQRWATRDDAIRCANGHLKELQRAGW
Ga0105248_120807991	3300009177	Switchgrass Rhizosphere	RVWRVRKNHTWIDARIRQVPDSAAVELQFFYDGAQVFARRWPSREHALNHAADQLRDLQRVGWNTHW*
Ga0105248_120975451	3300009177	Switchgrass Rhizosphere	LISEGPERVWRVRKNHTWIDAQVRQVPDSAAVELQFFYDGALVVARRWPSRERALSHAADQLRELQRVGWNTHW*
Ga0105249_117089251	3300009553	Switchgrass Rhizosphere	RHLAERVWRVRRNHTSIDAQVRDCADASGVEVQFFYDGALVITRRWSSRTEALACAADRLLELQRAGWVTHW*
Ga0126307_114140251	3300009789	Serpentine Soil	VNVKLAERVWRVRKNHTWIDAQLRARADSGACELQFYYEGALFVTRRWPSRDEALAHAAEQLRELQRAGWNTHW*
Ga0126304_102728222	3300010037	Serpentine Soil	MVPGDLAERVWRVRKNHTWIDAQVRDFIDAAVVEVRFFYDGSLLFAQRWPTREEALSCAARHLRELQRAGWVTHW*
Ga0134067_101033362	3300010321	Grasslands Soil	VTDTIRVWRVRKHHTWIDARLREAPDGVDLQFFYDNALMFARRWPSRSEALHEADTQLRQLQRAGWNTHW*
Ga0134071_104545432	3300010336	Grasslands Soil	MSEPVRVWRVRKDHTWVDARIDECCDADGVELQFFYDGALVVARKWPSRESALTEAEQQLRDLQRAGWNTHW*
Ga0126370_108081701	3300010358	Tropical Forest Soil	MTESARLWRVRKDHTWVDARIREGAEDKGVELQFFYDGALVVARKWPSRESALADADGQLRDLERAGWNTHW*
Ga0134125_116713221	3300010371	Terrestrial Soil	ERIWRVRKNHTWIDAQVRADTAGAEVRFYYDGALVFAQRWPTRAEAIHCANGHLRELQRAGWVTHW*
Ga0134127_110946571	3300010399	Terrestrial Soil	VTPNVRVWRVRKQHTWIDAQLRERPDSAGVELQFFYDGAMVFARSWPSREEALSHAEVQLRDLQRAGWVTHW*
Ga0134127_117834891	3300010399	Terrestrial Soil	VTELAERIWRVRKNHTWIDAQIRADTAGVEVRFYYDGALVFAQRWPTRAEAIHCANGHLRELQRAGWVTHW*
Ga0134127_123460382	3300010399	Terrestrial Soil	PMIPRHLAERVWRVRRNHTSIDAQVRDCADAAAVEVQFFYDGALVITRRWPSRAEALACAADQLQELQRAGWVTHW*
Ga0134122_102521832	3300010400	Terrestrial Soil	VTPTVRIWRVRKQHTWIDAQLRDRPDSTEVEIQFFYDGAMVFARSWPSREEALNHADDQLRDLQRAGWVTHW*
Ga0134122_105696702	3300010400	Terrestrial Soil	VSTLTPFERVWRVRKNHTWIDAQIRDCPQSTDVEILFFYDGALVLARRWPSREDALTHAEDQLRDLQRAGWNTHW*
Ga0134122_111349671	3300010400	Terrestrial Soil	MNPRHLAERVWRVRRNHTSIDAQIRDCPETSAVEVQFFYDGALVIARRWPSRAEALACAADQLVELQRAGWVTHW*
Ga0134121_112195262	3300010401	Terrestrial Soil	TPTVRIWRVRKQHTWIDAQLRDRPDSTEVEIQFFYDGAMVFARSWPSREEALNHADDQLRDLQRAGWVTHW*
Ga0134123_100140862	3300010403	Terrestrial Soil	MIPRHLAERVWRVRRNHTSIDAQVRDSADASGAEVQFFYDGALVITRRWPSRAEALACAADQLLELQRAGWVTHW*
Ga0134123_133797481	3300010403	Terrestrial Soil	LISEAAERVWRVRKNHTWIDARIRQVPDSAAVELQFFYDGAQVFARRWPSRERALSHAADQLRELQRVGWNTHW*
Ga0134123_135029712	3300010403	Terrestrial Soil	VTPNVRVWRVRKQHTWIDAQLRDRPDSAEVEIQFFYDGAMVFARSWPSREEALNHADDQLRDLQRAGWVTHW*
Ga0137376_100421382	3300012208	Vadose Zone Soil	VTPNVRVWRVRKQHTWIDAQLRSRPDSPEVEIRFFYDGAMVSARSWPSREAALSHADDQLRDLQRAGWVTHW*
Ga0137361_105390212	3300012362	Vadose Zone Soil	MTEPVRVWRVRKDHTWVDARIRDCSGTAGVELQFFYDGALVCARTWPSRESAITAAEGQLRDLQRAGWNTHW*
Ga0150984_1215294592	3300012469	Avena Fatua Rhizosphere	VPKLAERVWRVRKNHTWIDAQVQDTGDGCAVQFFYDGALVFARRWPSREQALAHAADQLSELQRAGWNTHW*
Ga0157284_101247542	3300012893	Soil	MIPRHLAERVWRVRRNHTSIDAQVRDCADASGVEVQFFYDGALVIARRWPSRTEALACAADQLLELQRAGWVTHW*
Ga0137396_111034401	3300012918	Vadose Zone Soil	VTPTVRVWRVRKQHTWIDAQLRNRPDSTEVEIQFFYDGALVFARSWPSREEALSHAAEQLRELQRAGWVTHW*
Ga0163162_106343162	3300013306	Switchgrass Rhizosphere	LISEVPERVWRVRKNHTWIDAQVRQVPDSAAVELQFFYDGALVLARRWPSRERALSHAADQLRELQRVGWNTHW*
Ga0157380_118848181	3300014326	Switchgrass Rhizosphere	VTPNVRVWRVRKQHTWIDAQLRNRPDSTEVEIQFFYDGAMVFARSWPSREEALSHAGEQLRDLQRAGWVTHW
Ga0184604_100055583	3300018000	Groundwater Sediment	VTPNVRVWRVRKQHTWIDVQLRDRPESTEVEIQFFYDGAMVFARSWPSREEALSHADEQLRDLQRAGWVTHW
Ga0184632_102793581	3300018075	Groundwater Sediment	MIPPDLAERVWRVRKSHTWIDAKIRDCPQSTDVEIQFSYDGVLVLARRWPSREEALTCAAEQLRELQRAGWNTHW
Ga0190270_103109102	3300018469	Soil	MVPPDLAERVWRVRKNHTWIDAQIRDCPQSADVEIRFFYDGALVLARRWPSREAALTGAADQLRELQRAGWNTHW
Ga0190274_100126352	3300018476	Soil	MVPGDLAERVWRVRKNHTWIDAQVRDCVEPAGVEVRFFYDGSLVFAQRWTTREEALSCAAGHLRDLQRAGWVTHW
Ga0190274_104850312	3300018476	Soil	VTERIWRVRKNHTWIDAQLRACDEADASEVRFFYDGVLLFARRWPTREEALTHAAEQLRELQRSGWNTHW
Ga0066669_111997151	3300018482	Grasslands Soil	MSEPVRVWRARKDHTWVDARIRECRDADGFELQFFYDGALLVARKWPSRESALTEAEAQLRDLQRAGWNTHW
Ga0193753_102412152	3300020034	Soil	MSGEVRIWRLRKNHTWLDARLNACPGSTDVELQFFYDGALLHARRWPSREDAVSHADRQLRELQRAGWNTHW
Ga0210382_100360582	3300021080	Groundwater Sediment	MIPPELAERVWRVRKDHTWIDAQIRGCPQSTDVEIQFFYDGVPVFARRWPSRERALTHAADQLRDLQRAGWNTHW
Ga0210382_102172672	3300021080	Groundwater Sediment	MASPDLAERVWRVRKSHTWIDAQIRDCSQSADVEIQFFYDGALVLARRWPSRDEALDCAADRLRDLQRAGWVTHW
Ga0210382_105269692	3300021080	Groundwater Sediment	VTPNVRVWRVRKQHTWIDVQLRDRPESTEVEIQFFYDGAMVFARSWPSREEALSHADDQLRDLQRAGWV
Ga0210402_104164982	3300021478	Soil	VDAEVRIWRLRKDHTWIDARLRPCADSGDVEVQFFYDGALLFARRWPSRELALTHADDQLRNLQRAGWNTHW
Ga0222621_10748191	3300021510	Groundwater Sediment	MIPRHLAERVWRVRRNHTSIDAQVRDCRDSTDVEVQFFYNGVLVIARRWPSRAEALSCAADQLLELQRAGWVTHW
Ga0222622_100173333	3300022756	Groundwater Sediment	MIPRHLAERVWRVRRNHTSIDAQVRDCRDSTDVEVQFFYDGVLVIARRWPSRAEALSCAADQLLELQRAGWVTHW
Ga0222622_105069792	3300022756	Groundwater Sediment	WRVRKQHTWIDAQLRNRPDSTEVEVQFFYDGAMVFARSWPSREEALSHADEQLRDLQRAGWVTHW
Ga0222622_108020402	3300022756	Groundwater Sediment	MVRPDLAERVWRVRKNHTWIDAQIRDGRHSTGVELQFFYDGALLLARRWPSREQALTHAADRLRDLQRVGWITH
Ga0207682_103908652	3300025893	Miscanthus Rhizosphere	GPGVDRPMIRDGRSQGLGLARSVVTELAERIWRVRKNHTWIDAQVRADTAGAEVRFYYDGALVFAQRWPTRAEAIHCANGHLRELQRAGWVTHW
Ga0207645_100102102	3300025907	Miscanthus Rhizosphere	MIRDGRSQGLGLARSVVTELAERIWRVRKNHTWIDAQVRADTAGAEVRFYYDGALVFAQRWPTRAEAIHCANGHLRELQRAGWVTHW
Ga0207681_101097902	3300025923	Switchgrass Rhizosphere	MIRDGRSQGLGLARSVVTELAERIWRVRKNHTWIDAQVRADTAGAEVRFYYDGALVFAQRWPTRAEAIHCASGHLRELQRAGWVTHW
Ga0207681_108431061	3300025923	Switchgrass Rhizosphere	MIPRHLAERVWRVRRNHTSIDAQVRDCADASGVEVQFFYDGALVITRRWSSRTEALACAADRLLELQRAGWVTHW
Ga0207687_100668802	3300025927	Miscanthus Rhizosphere	MIAPKPAQRVWRVRKNHTWIDAQVLDEADTGAAEIRFYYDGALVFARRWPSRDAALTHADDQLRELQRTGWVTHW
Ga0207687_113216061	3300025927	Miscanthus Rhizosphere	MANVRVWRVRKQHTWIDAQLRDQPDSSGVELQFFYDGAMVFARSWPSREEALREADGQLRDLQRAGWVTHW
Ga0207687_116918691	3300025927	Miscanthus Rhizosphere	VTPNVRIWRVRKQHTWIDAQLRNRPDSTEVEVRFFYDGAMVFARSWPSREEALSHADEQLRDLQRAGWVTHW
Ga0207711_104064852	3300025941	Switchgrass Rhizosphere	LISEAAERVWRVRKNHTWIDAQVRQVPDSAAVELQFFYDGAQVFARRWPSREHALNHAADQLRDLQRVGWNTHW
Ga0207689_103861542	3300025942	Miscanthus Rhizosphere	MANVRVWRVRKQHTWIDAQLRDRPDSSGVELQFFYDGAMVFARSWPSREEALREADGHLRDLQRAGWVTHW
Ga0207651_103134931	3300025960	Switchgrass Rhizosphere	TWIDAQVRADTAGAEVRFYYDGALVFAQRWPTRAEAIHCANGHLRELQRAGWVTHW
Ga0207651_111366522	3300025960	Switchgrass Rhizosphere	MVPGDLAERVWRVRKNHTWIDAQVRDCVEPAGVEVRFFYDGSLVFAQRWTTREEALSCAA
Ga0207640_110047542	3300025981	Corn Rhizosphere	VTPNVRLWRVRKQHTWIDAQLRDRPESTEVEIQFFYDGAMVFARSWPSREAALSHAGDQLRDLQRAGWVTHW
Ga0207658_121740111	3300025986	Switchgrass Rhizosphere	MVPGDLAERVWRVRKNHTWIDAQVRDCVEPAGVEVRFFYDGSLVFAQRWTTREEALSCAAGHLRDLQ
Ga0207678_116896081	3300026067	Corn Rhizosphere	SIDAQVRDCADASGAEVQFFYDGALVITRRWPSRAEALGCAADQLLELQRAGWVTHW
Ga0207648_100668992	3300026089	Miscanthus Rhizosphere	MIPRHLAERVWRVRRNHTSIDAQVRDCADASGAEVQFFYDGALVITRRWPSRAEALACAADQ
Ga0207683_120967621	3300026121	Miscanthus Rhizosphere	VTPNVRVWRVRKQHTWIDAQLRNRPDSTEVEIQFFYDGAMVFARSWPSREEALSHAGEQLRDLQRA
Ga0209474_101927102	3300026550	Soil	MSEPVRVWRARKDHTWVDARIRECRDADGVELQFFYDGALLVARKWPSRESALTEAEAQLRDLQRAGWNTHW
Ga0209811_103650481	3300027821	Surface Soil	LRVVAERVWRVRRNHTSIDAQIRDCPETSAVEVQFFYDGALVIARRWPSRAEALACAADQLVELQRAGWVTHW
Ga0207428_104003872	3300027907	Populus Rhizosphere	VRELAQRVWRARKSHAWIDAQVRDCGDSPGAEVRFYYDGALVLAQRWATRDDAIRCANGHLKELQRAGWVTHW
Ga0209382_100830272	3300027909	Populus Rhizosphere	MLPSGLAERVWRVRKNHTWIDAQVRECAEPPGVEVRFFYDGSLVFAQRWLTRDEALGCAAVHLRDLQRAGWVTHW
Ga0268265_101953622	3300028380	Switchgrass Rhizosphere	LISEAPERVWRVRKNHTWIDAQVRQVPDSAAVELQFFYDGALVLARRWPSRERALSHAADQLRELQRVGWNTHW
Ga0268265_107926902	3300028380	Switchgrass Rhizosphere	MNERIWRVRKNHTWIDAQLRACDEADASEVRFFYDGMLLFARRWPTREEALAHAADQLRELQRSGWNTHW
Ga0307295_100571062	3300028708	Soil	VTRALVTPSVRVWRVRKQHTWIDAQLRNRPDSTEVEVQFFYDGAMVFARSWPSREEALSHADEQLRDLQRAGWVTHW
Ga0307298_100157842	3300028717	Soil	VTVTPSVRVWRVRKQHTWIDAQLRNRPDSTEVEVQFFYDGAMVFARSWPSREEALSHADEQLRDLQRAGWVTHW
Ga0307307_102672652	3300028718	Soil	MIPRPLAERVWRVRRNHTSIDAQVRDCRDSTDVEVQFFYDGVLVIARRWPSRAEALSCAADQLLELQRAGWVTHW
Ga0307312_100479942	3300028828	Soil	VRRNHTSIDAQVRDCRDSTDVEVQFFYDGVLVIARRWPSRAEALSCAADQLLELQRAGWVTHW
Ga0307312_104692151	3300028828	Soil	MASPDLAERVWRVRKSHTWIDAQIRDCSQSADVEIQFFYDGALILARRWPSRDEALECAADQLRDLQRAGWVTHW
Ga0307312_105409981	3300028828	Soil	VTPNVRVWRVRKQHTWIDAQLRNRPDSTEVEIQFFYDGAMVFARSWPSREEALSHADDQLRDLQRAGWVTHW
Ga0307308_100870892	3300028884	Soil	VRKNHTWIDAQMRPCSQSADVEIQFFYDGALILARRWPSRDEALECAADQLRDLQRAGWVTHW
Ga0073997_100013512	3300030997	Soil	MIPRHLAERVWRVRKSHTWIDAQIRGCPRSTDVEIQFSYDGVPMLARRWPSRERALSHAADALRELQRAGWNTHW
Ga0073997_118805921	3300030997	Soil	VTPTVRVWRVRKQHTWIDAQLRDRPDSTEVEIQFFYGGAMVFARSWPSRDEALSHAGDQLRDLQRAGWVTHW
Ga0073997_120928841	3300030997	Soil	MIPPDLAERVWRVRKSHTWIDAQIRGCPQSADVEIRFSYDGVPMLVRRWPSRERALTHAAEELRELQR
Ga0073997_122479172	3300030997	Soil	VTPNVRVWRVRKQHTWIDAQLRDRPDSTEVEIQFFYDGAMVFARSWPSREEALSHAENQLRDLQRAGWVTHW
Ga0073997_122601152	3300030997	Soil	VTPNVRVWRVRKQHTWIDAQLRDRPDSTEVEIQFFYDGAMVFARSWSSREEALSHADEQLRDLQRAGWVTHW
Ga0073997_122660192	3300030997	Soil	VTPNVRVWRVRKHHTWIDAQLRNRPDSPEVEIQFFYDGAMVFARCWPSREEALSHADAQLRDLQRAGWVTHW
Ga0073996_121693531	3300030998	Soil	MIPRDLAERVWRVRKSHTWIDAQIRGCPQSTDVEIRFSYDGVPMLVRRWPSRERALTHAAEELRELQRAGWVTHW
Ga0307506_102289562	3300031366	Soil	MVPRHLAERVWRVRRNHTSIDAQIRDCPETSAVEVQFFYDGALVIARRWPSRAEALACAADQLVELQRAGWVTHW
Ga0307469_104000261	3300031720	Hardwood Forest Soil	LRKNHTWIDAQIRDCVESDDVELQFFYDGALVFARRWPSREAALTHADDQLRDLQRAGWNTHW
Ga0315272_102970252	3300032018	Sediment	MTTPVRVWRLRKDHTWLDARLTDCAESTDVETQFFYDGALLVARRWPSREQALTHAEDQLRDLQR
Ga0315281_112745042	3300032163	Sediment	RKNHTWLDARLTDCAGSTDVEMQFLYDGVLLVARRWPSREQALTHAESQLRDLQRAGWVTHW

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F059111

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences