Metagenome / Metatranscriptome Family F058990

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F058990
Family Type	Metagenome / Metatranscriptome
Number of Sequences	134
Average Sequence Length	47 residues
Representative Sequence	MGLLDLTRIVRPALLFAAAITLTAAWPAAAQTSIKFSLDGRLEGLAA
Number of Associated Samples	118
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	87.31 %
Associated GOLD sequencing projects	112
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (70.149 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (14.925 % of family members)
Environment Ontology (ENVO)	Unclassified (26.866 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.776 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 37.33% β-sheet: 5.33% Coil/Unstructured: 57.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF14850	Pro_dh-DNA_bdg	39.55
PF02548	Pantoate_transf	26.12
PF00126	HTH_1	1.49
PF01571	GCV_T	1.49
PF13442	Cytochrome_CBB3	0.75
PF03466	LysR_substrate	0.75
PF03447	NAD_binding_3	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG0413	Ketopantoate hydroxymethyltransferase	Coenzyme transport and metabolism [H]	26.12

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	70.15 %
Unclassified	root	N/A	29.85 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	70.15 %
Unclassified	root	N/A	29.85 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	70.15 %
Unclassified	root	N/A	29.85 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	70.15 %
Unclassified	root	N/A	29.85 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	67.91 %
Unclassified	root	N/A	29.85 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.85 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	13.43 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	8.21 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.85 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.21 %
Burkholderiales genera incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis	0.75 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.75 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.85 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.21 %
Methylibium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium	0.75 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.75 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.85 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.21 %
unclassified Methylibium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium → unclassified Methylibium	0.75 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.75 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.85 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.21 %
Methylibium sp. T29	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium → unclassified Methylibium → Methylibium sp. T29	0.75 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	0.75 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10137935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	590	Open in IMG/M
3300001867\|JGI12627J18819_10066585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1499	Open in IMG/M
3300005165\|Ga0066869_10015918	Not Available	1085	Open in IMG/M
3300005174\|Ga0066680_10526542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	743	Open in IMG/M
3300005180\|Ga0066685_11027201	Not Available	543	Open in IMG/M
3300005332\|Ga0066388_105107554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	666	Open in IMG/M
3300005332\|Ga0066388_106221277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	602	Open in IMG/M
3300005332\|Ga0066388_107733333	Not Available	538	Open in IMG/M
3300005338\|Ga0068868_101418690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	648	Open in IMG/M
3300005436\|Ga0070713_101638042	All Organisms → cellular organisms → Bacteria → Proteobacteria	625	Open in IMG/M
3300005445\|Ga0070708_101411361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	649	Open in IMG/M
3300005457\|Ga0070662_100141790	All Organisms → cellular organisms → Bacteria → Proteobacteria	1863	Open in IMG/M
3300005467\|Ga0070706_101344956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	654	Open in IMG/M
3300005536\|Ga0070697_100090753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2525	Open in IMG/M
3300005536\|Ga0070697_101073029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	716	Open in IMG/M
3300005536\|Ga0070697_101503916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	602	Open in IMG/M
3300005536\|Ga0070697_102120967	Not Available	503	Open in IMG/M
3300005554\|Ga0066661_10054350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2300	Open in IMG/M
3300005557\|Ga0066704_10121782	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1730	Open in IMG/M
3300005559\|Ga0066700_10236816	Not Available	1272	Open in IMG/M
3300005713\|Ga0066905_100802542	Not Available	816	Open in IMG/M
3300005841\|Ga0068863_100981642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	847	Open in IMG/M
3300005937\|Ga0081455_10415919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	929	Open in IMG/M
3300006028\|Ga0070717_10457651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1150	Open in IMG/M
3300006032\|Ga0066696_10091658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1808	Open in IMG/M
3300006034\|Ga0066656_10583833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	724	Open in IMG/M
3300006051\|Ga0075364_10327935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1042	Open in IMG/M
3300006572\|Ga0074051_11503433	Not Available	520	Open in IMG/M
3300006578\|Ga0074059_10027690	Not Available	827	Open in IMG/M
3300006578\|Ga0074059_10027850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1209	Open in IMG/M
3300006852\|Ga0075433_10307785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1402	Open in IMG/M
3300006880\|Ga0075429_100578392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	984	Open in IMG/M
3300007258\|Ga0099793_10014779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3108	Open in IMG/M
3300009094\|Ga0111539_10777515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1114	Open in IMG/M
3300009137\|Ga0066709_102747810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	655	Open in IMG/M
3300009137\|Ga0066709_103076263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	611	Open in IMG/M
3300009147\|Ga0114129_10464676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1658	Open in IMG/M
3300009176\|Ga0105242_12336513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	581	Open in IMG/M
3300010043\|Ga0126380_11877684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	544	Open in IMG/M
3300010048\|Ga0126373_11884530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	661	Open in IMG/M
3300010154\|Ga0127503_11149307	Not Available	571	Open in IMG/M
3300010358\|Ga0126370_10680447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	901	Open in IMG/M
3300010360\|Ga0126372_12350985	Not Available	583	Open in IMG/M
3300010360\|Ga0126372_12387717	Not Available	579	Open in IMG/M
3300010361\|Ga0126378_12609638	Not Available	577	Open in IMG/M
3300010362\|Ga0126377_10660990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1095	Open in IMG/M
3300010868\|Ga0124844_1163244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	835	Open in IMG/M
3300010999\|Ga0138505_100063276	Not Available	543	Open in IMG/M
3300012189\|Ga0137388_10112723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2355	Open in IMG/M
3300012199\|Ga0137383_10057199	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	2795	Open in IMG/M
3300012202\|Ga0137363_10175511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1703	Open in IMG/M
3300012202\|Ga0137363_10345306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1231	Open in IMG/M
3300012203\|Ga0137399_11802332	Not Available	501	Open in IMG/M
3300012208\|Ga0137376_10135877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2108	Open in IMG/M
3300012349\|Ga0137387_10342307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1083	Open in IMG/M
3300012360\|Ga0137375_10947485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	681	Open in IMG/M
3300012469\|Ga0150984_108063075	Not Available	509	Open in IMG/M
3300012582\|Ga0137358_10041075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3065	Open in IMG/M
3300012685\|Ga0137397_11058402	Not Available	593	Open in IMG/M
3300012917\|Ga0137395_10108899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1851	Open in IMG/M
3300012917\|Ga0137395_10883325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	647	Open in IMG/M
3300012923\|Ga0137359_11138712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	667	Open in IMG/M
3300012929\|Ga0137404_11365727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	654	Open in IMG/M
3300012955\|Ga0164298_10929805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	635	Open in IMG/M
3300012957\|Ga0164303_10142361	Not Available	1257	Open in IMG/M
3300012958\|Ga0164299_10166048	Not Available	1239	Open in IMG/M
3300012961\|Ga0164302_11912361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	505	Open in IMG/M
3300012985\|Ga0164308_10290979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1293	Open in IMG/M
3300012988\|Ga0164306_11421329	Not Available	591	Open in IMG/M
3300012989\|Ga0164305_10174744	Not Available	1484	Open in IMG/M
3300013105\|Ga0157369_11651098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	651	Open in IMG/M
3300015372\|Ga0132256_100436275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1415	Open in IMG/M
3300015372\|Ga0132256_103693489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	515	Open in IMG/M
3300016387\|Ga0182040_10054527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2507	Open in IMG/M
3300018076\|Ga0184609_10040176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1962	Open in IMG/M
3300018433\|Ga0066667_10182877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1520	Open in IMG/M
3300018433\|Ga0066667_10343322	Not Available	1183	Open in IMG/M
3300018465\|Ga0190269_10187474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1108	Open in IMG/M
3300018468\|Ga0066662_12217328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	576	Open in IMG/M
3300018469\|Ga0190270_10571510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1095	Open in IMG/M
3300018482\|Ga0066669_10901902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	791	Open in IMG/M
3300020001\|Ga0193731_1012694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2172	Open in IMG/M
3300020199\|Ga0179592_10523850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	506	Open in IMG/M
3300020579\|Ga0210407_10753802	Not Available	753	Open in IMG/M
3300021168\|Ga0210406_10148036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1972	Open in IMG/M
3300021168\|Ga0210406_10871910	Not Available	679	Open in IMG/M
3300021559\|Ga0210409_11032501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	697	Open in IMG/M
3300025910\|Ga0207684_10121523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2239	Open in IMG/M
3300025910\|Ga0207684_10191890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1762	Open in IMG/M
3300025925\|Ga0207650_10167444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1744	Open in IMG/M
3300025939\|Ga0207665_11293702	Not Available	581	Open in IMG/M
3300026304\|Ga0209240_1131865	Not Available	830	Open in IMG/M
3300026494\|Ga0257159_1039342	Not Available	796	Open in IMG/M
3300026551\|Ga0209648_10027032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5016	Open in IMG/M
3300026557\|Ga0179587_10422925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	870	Open in IMG/M
3300026995\|Ga0208761_1013323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	728	Open in IMG/M
3300027748\|Ga0209689_1093249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1569	Open in IMG/M
3300027775\|Ga0209177_10501701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	506	Open in IMG/M
3300027882\|Ga0209590_10252710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1125	Open in IMG/M
3300027903\|Ga0209488_10002476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	15136	Open in IMG/M
3300027907\|Ga0207428_10463479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	923	Open in IMG/M
3300028047\|Ga0209526_10040710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3269	Open in IMG/M
3300028717\|Ga0307298_10249117	Not Available	527	Open in IMG/M
3300028719\|Ga0307301_10222710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	614	Open in IMG/M
3300028768\|Ga0307280_10391653	Not Available	517	Open in IMG/M
3300028787\|Ga0307323_10283249	Not Available	596	Open in IMG/M
3300028802\|Ga0307503_10004435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium → unclassified Methylibium → Methylibium sp. T29	3622	Open in IMG/M
3300031114\|Ga0308187_10135783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	805	Open in IMG/M
3300031152\|Ga0307501_10192477	Not Available	579	Open in IMG/M
3300031170\|Ga0307498_10002998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2757	Open in IMG/M
3300031200\|Ga0307496_10142410	Not Available	505	Open in IMG/M
3300031226\|Ga0307497_10364015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	681	Open in IMG/M
3300031469\|Ga0170819_14893397	Not Available	530	Open in IMG/M
3300031543\|Ga0318516_10216039	Not Available	1108	Open in IMG/M
3300031561\|Ga0318528_10082412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1671	Open in IMG/M
3300031681\|Ga0318572_10054680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2159	Open in IMG/M
3300031681\|Ga0318572_10134694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1419	Open in IMG/M
3300031713\|Ga0318496_10551048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	637	Open in IMG/M
3300031740\|Ga0307468_100492495	Not Available	969	Open in IMG/M
3300031748\|Ga0318492_10098198	Not Available	1436	Open in IMG/M
3300031764\|Ga0318535_10218848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	852	Open in IMG/M
3300031781\|Ga0318547_10025613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2969	Open in IMG/M
3300031781\|Ga0318547_10266953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1034	Open in IMG/M
3300031797\|Ga0318550_10080840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1510	Open in IMG/M
3300031798\|Ga0318523_10552266	Not Available	568	Open in IMG/M
3300031805\|Ga0318497_10345957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	830	Open in IMG/M
3300031890\|Ga0306925_10857733	Not Available	937	Open in IMG/M
3300031913\|Ga0310891_10312204	Not Available	557	Open in IMG/M
3300031947\|Ga0310909_10689266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	849	Open in IMG/M
3300031954\|Ga0306926_12811670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	525	Open in IMG/M
3300032001\|Ga0306922_12376330	Not Available	506	Open in IMG/M
3300032063\|Ga0318504_10533886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	562	Open in IMG/M
3300032076\|Ga0306924_10310070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1810	Open in IMG/M
3300032090\|Ga0318518_10276182	Not Available	862	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.06%
Host-Associated	Host-Associated	11.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.57%
Plants	Host-Associated → Plants	11.94%
Aquatic	Environmental → Aquatic	1.49%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.96%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.24%
Freshwater	Environmental → Aquatic → Freshwater	0.75%
Sediment	Environmental → Aquatic → Sediment	0.75%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.75%
Roots	Host-Associated → Plants → Roots	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.39%
Loam	Environmental → Terrestrial → Soil → Loam	13.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.22%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.73%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.24%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.75%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.75%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.06%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.90%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.21%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.22%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.22%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.24%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.75%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.75%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.75%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.93%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	14.18%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.97%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.97%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.73%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.49%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.49%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.49%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.75%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.75%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.75%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.75%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.75%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.75%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300010999	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300026995	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031200	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 9_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_101379351	3300000597	Forest Soil	MGLLELTRTVRPALLFAAAITLTATRPAAAQTSIKFSLDGRLEGLAATFLLPQDRG
JGI12627J18819_100665853	3300001867	Forest Soil	MSLLDLTRIVRPALLFAAAITLTAAWPAAGQTSIKFSLDGRLEGLAATFFLPQD
Ga0066869_100159182	3300005165	Soil	MSLLDLTRIVRPAHLFAAAITLTAAWPAAGQTSIKFSLDG
Ga0066680_105265421	3300005174	Soil	MGLLNLRQIVRPAHLFAAAIALMAAGPAAAQTSIKFSLDGRLEGLAATFFF
Ga0066685_110272012	3300005180	Soil	MSLLDLTRMVRPAHLFAAAITLTAAWPAAGQTSIKFSLDGRLE
Ga0066388_1051075541	3300005332	Tropical Forest Soil	MSLLDLTRMVRPAHLFAAAITLTAAWPAAGQTSIKFSLDGRLEGLAATFFL
Ga0066388_1062212771	3300005332	Tropical Forest Soil	MSLLDLTRIVRPALPFAAAITLTAAWPAAAQTSIKFSLDGRLEGLAATFLLPQD
Ga0066388_1077333332	3300005332	Tropical Forest Soil	MGLLDLTRIVRPAHLFAAAITLTAAWPAAGQTSIKFSLDGR
Ga0068868_1014186901	3300005338	Miscanthus Rhizosphere	MGLLDFTRIGRPAYLLAVAFALVVAGPAAAQTSVKFSLDGRLEG
Ga0070713_1016380422	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MGLLIVTRIGRPAYLAAAALVLIFARPAAAQTSVKFSLDGRLEGP
Ga0070708_1014113611	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSLLDLTRIVQPAHLFAAAITLTAAWPAAGQTSIKFSLDGRLEGLAATF
Ga0070662_1001417903	3300005457	Corn Rhizosphere	MGPLNLTRIARHAYVFAAAISLMWASSHAAAQTSIKFSLDGRLEGLVATFLLP
Ga0070706_1013449561	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSLLDLTRIVQPAHLFAAAITLTAAWPAAGQTSIKFSLDGRLEGLAATFF
Ga0070697_1000907532	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MSLLDLTRIVQPAHLFAAAITLTAAWPAAGQTSIKFSLDGRLEGL
Ga0070697_1010730292	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MSLLDLTRIVRPAHLFAAAITLTAAWPAAGQTSIKFSLDGRLEGLAATFFL
Ga0070697_1015039162	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MRLFKLTRINRHAALLAALIALTAVRPAVAQTSIKFSLDGRLEGLAAT
Ga0070697_1021209672	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MGLLNVTRIGRPAYLAAAALVLIFAGPAAAQTSIKFSLDGRLEGPEAL
Ga0066661_100543501	3300005554	Soil	MSLLDLTRMVRPAHLFAAAITLTAAWPAAGQTSIKFSLDGRLEGLAATFF
Ga0066704_101217823	3300005557	Soil	MSLLDLTRMVRPAHLFAAAITLTAAWPAAGQTSIKFSLDGRLEGLAATF
Ga0066700_102368161	3300005559	Soil	MSLLDLTRMVRPAHLFAAAITLTAAWPAAGQTSIKFSLD
Ga0066905_1008025421	3300005713	Tropical Forest Soil	MGLLNLMRIVRPAHVFAAAIALTTAWPAAAQTSIKFSLDGR
Ga0068863_1009816422	3300005841	Switchgrass Rhizosphere	MGLLDFTRIGRPAYLLAVAFALVAAGPAAAQTSVKFSLDG
Ga0081455_104159192	3300005937	Tabebuia Heterophylla Rhizosphere	MGLLNLRQIGPLAYLVAAASALVLASPAAAQAPIKFSLDSRIEGPDALILLPLDR
Ga0070717_104576511	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSLLDLTRIVRPAHLFAAAITLTAAWPAAGQTSIKFSLDGRLEGLAATFF
Ga0066696_100916582	3300006032	Soil	MRLLKLTRINRHAALLATLIALTAVRPAAAQTSIKF
Ga0066656_105838331	3300006034	Soil	MRLLKLTRIIHSASLVAALIALAVAWPAAAQTSIKFSLDGRLEGLAA
Ga0075364_103279352	3300006051	Populus Endosphere	MGLLNATRIGRPAYLATAALVLIFAGPAAAQTSIKFSLDGRLEGPEALV
Ga0074051_115034331	3300006572	Soil	MGLLNLTRIGRPAYLAAAALALVFSGPAAAQTGIKFSLDGRLEGPEA
Ga0074059_100276901	3300006578	Soil	MGLLDLTRIVRPAHLFAAAITLTAAWPAAGQTSIKFSLDGRLEGLAAT
Ga0074059_100278501	3300006578	Soil	MSLLDLTRIVRPAHLFAAAITLTAAWPAAGQTSIKFSLDGRLEGLAAT
Ga0075433_103077851	3300006852	Populus Rhizosphere	MSLLDLTRIVRPALLFAAAITLTAAWPAAGQTSIKFSLDGRLEGLA
Ga0075429_1005783922	3300006880	Populus Rhizosphere	MGLLDFTRIGRPAYLLAVAFALVVAGPAAAQTSVKFSLDGRLEGPE
Ga0099793_100147791	3300007258	Vadose Zone Soil	MSLLDLTRIVRPALLFAAAITLTAAWPAAGQTSIKFS
Ga0111539_107775152	3300009094	Populus Rhizosphere	MRLLKLTRINRPASLVAALIALTVAWPAAAQTSIRFSLD
Ga0066709_1027478101	3300009137	Grasslands Soil	MSRLDLTRIVRPAHLFAAAITLTAAWPAAGQTSIKFSLDGRLEGLAATFF
Ga0066709_1030762631	3300009137	Grasslands Soil	MSLLDLTRIVRPAHLFAAAITLTAAWPAAGQTSIK
Ga0114129_104646761	3300009147	Populus Rhizosphere	MRLFKLTRINRHAALLAALIALTAVRPAAAQTSIKF
Ga0105242_123365131	3300009176	Miscanthus Rhizosphere	MGLLNVTRIGRPAYLAAAALVLIFAGPAAAQTSIKFS
Ga0126380_118776842	3300010043	Tropical Forest Soil	MGLLNLTRIVRPAHVFAAAIALTGAWPAAAQTSIKFSLDGRLEGLAATFFLPQDRGYF
Ga0126373_118845301	3300010048	Tropical Forest Soil	MGLLDVTRTVRPALLFAAAITLTATSPAAAQTSIKFSLDGRLEGLAATFLFPQ
Ga0127503_111493072	3300010154	Soil	MSLLDLTRIVRSAHLFAAAITLTAAWPAAGQTSIKFSLDGRLEGLAATFFLPQD
Ga0126370_106804471	3300010358	Tropical Forest Soil	MGRHDLPRSGQLTLLLAAALALLAAWPAGAQTPIRFSLDGRLEGLTA
Ga0126372_123509852	3300010360	Tropical Forest Soil	MGLLDLTRIVRPAHLFAAAITLTAAWPAAGQTSIKFSLDGRLEGLAATFFLP
Ga0126372_123877171	3300010360	Tropical Forest Soil	MSLLDPTRIGRPALLFAAAIACMAAWPAAAQTSIKFSLDGRLEGLTATFFL
Ga0126378_126096381	3300010361	Tropical Forest Soil	MSLLDLTRMVRPAHLFAAAITLTAAWPAAGQTSIKF
Ga0126377_106609901	3300010362	Tropical Forest Soil	MRLLKLTRISRPASLVGALIALTMAWPAAAQTSIKFSLDGR
Ga0124844_11632442	3300010868	Tropical Forest Soil	MSLLDLARIVRPALLFAAAITLTAARPAAAQTSIKFSLDGRLEGLA
Ga0138505_1000632762	3300010999	Soil	MGLLNLMRRARLAQIFAAAIAMIAAWPAAAQTGIKFSLDGRLE
Ga0137388_101127232	3300012189	Vadose Zone Soil	MSLLDLTRIVRPAHLFAAAITLTAAWPAAGQTSIKFSLDGRLEGLAATFFLPQD
Ga0137383_100571991	3300012199	Vadose Zone Soil	MSLLDLTRMVRPAHLFAAAITLTAAWPAAGQTSIKFSLDGRLEGLAATFFLP
Ga0137363_101755111	3300012202	Vadose Zone Soil	MSLLDLTRIVRSAHLFAAAITLTAAWPAAGQTSIKFSLD
Ga0137363_103453061	3300012202	Vadose Zone Soil	MSLLDLTRIVRPAHLFAAAITLTAAWPAAGQTSIKFSLD
Ga0137399_118023321	3300012203	Vadose Zone Soil	MRLLDLTRIVRPALLFAAAITLTAAWPAAGQTSIKFS
Ga0137376_101358772	3300012208	Vadose Zone Soil	MSLLDLTRIVQPAHLFAAAITLTAAWPAAGQTSIKFSLDGRL
Ga0137387_103423071	3300012349	Vadose Zone Soil	MGLLNLRQIVRPAHLFAAAIALMAEGPAAAQTSIKFSLDGRLEGLA
Ga0137375_109474852	3300012360	Vadose Zone Soil	MGLLNLTRMDRLAPLPAASLAVIAAWLAAAQTTMKFSLGGCLEVLPAT
Ga0150984_1080630751	3300012469	Avena Fatua Rhizosphere	MGLLNVTRIGRPAYLAAAALVLIFAGPAAAQTSIKFSLDGRLEGPEALVL
Ga0137358_100410754	3300012582	Vadose Zone Soil	MSLLDLTRMVRPAPLFAAAITLTAAWPAAGQTSIKFSLDGRLEGLAATFFLPQDRGYF
Ga0137397_110584022	3300012685	Vadose Zone Soil	MGLFNLTRIGRPAYLAAAALALVFSGPAVAQTAGIKFSLDGRLEGPEA
Ga0137395_101088991	3300012917	Vadose Zone Soil	MGLLNLTRIDRGAYLVAAAIALMAAPPAAAQSTIKSSLDGRLEGLAATFFLPQDRGYFR
Ga0137395_108833252	3300012917	Vadose Zone Soil	MSLLDLTRIVRPAHLFAAAITLTAAWPAAGQTSIKFSLDGRLEGLAATFFLPQDRG
Ga0137359_111387122	3300012923	Vadose Zone Soil	MSLLDLTRIVQPARLFAAAITLTAAWPAAGQTSIKFSLDGRLEG
Ga0137404_113657272	3300012929	Vadose Zone Soil	MGLLDLTRMDRLAPLLAAALAVIAAWPAAAQTSIKFSLDGRLEGLAATFFLPQDRGY
Ga0164298_109298051	3300012955	Soil	MGLLNVTRIGRPAYLAAAALVLIFAGPAAAQTSIKFSLD
Ga0164303_101423611	3300012957	Soil	MSLLDLTRIGRPALLFAAAITLTAAWPAAAQTSIKF
Ga0164299_101660482	3300012958	Soil	MSLLDLTRIVRPAHLFAAAITLTAAWPAAGQTSIKFSLDGRL
Ga0164302_119123611	3300012961	Soil	MRLFKLTRINRHAALLAALIALTAVRPAAAQTSIKFSLDGRLEGLAATFFLPQDR
Ga0164308_102909791	3300012985	Soil	MGLLNLTRIGQSAYLLAAAFALVAAWPAAAQTTIKFSLDGRLEGPETLLLLPQDSGY
Ga0164306_114213291	3300012988	Soil	MGLLDFTRIGRPAYLLAVAFALAAAGPAAAQTSVKFSLDGRLEGPE
Ga0164305_101747441	3300012989	Soil	MGPLNLTRIARHAYVFAAAISLMWASSHAAAQTSIKFSLDGRLEGLVATFLLPQDRGYFRAD
Ga0157369_116510981	3300013105	Corn Rhizosphere	MGLLNVTRIGRPAYLAAAALVLIFAGPAAAQTSIKFSLDGRLEGPEALVLLPQDKG
Ga0132256_1004362752	3300015372	Arabidopsis Rhizosphere	MGLLNVTRIGRPAYLAAAALVLIFAGPGAAQTSIKFSLDGRLEGPEALVLLP
Ga0132256_1036934892	3300015372	Arabidopsis Rhizosphere	MRLFKLTRINRHAALLAALIALTAVRPAAAQTSIKFSLDGRLEG
Ga0182040_100545272	3300016387	Soil	MGLLNLRRIVRPAHVFAAAIALMAAWPAAAQTSIKFSLDGRLEGLA
Ga0184609_100401761	3300018076	Groundwater Sediment	MGLFNLTRIGRPAYLAAAALALVFSGPAVAQTGIKFSLDG
Ga0066667_101828771	3300018433	Grasslands Soil	MSLLDLTRIVQPAHLFAAAITLTAAWPAAGQTSIKFSLD
Ga0066667_103433221	3300018433	Grasslands Soil	MSLLDLTRMVRPAHLFAAAITLTAAWPAAGQTSIKFSLDGRLEGLA
Ga0190269_101874742	3300018465	Soil	MGLLNVTRIGRPAYLATAALVLIFAGPAAAQTSIKFSLDGRLEGPEALVLLPQ
Ga0066662_122173282	3300018468	Grasslands Soil	MSLLDLTRIVRPAHLFAAAITLTAAWPAAGQTSIKFSLDGRLEGLAATFFLP
Ga0190270_105715102	3300018469	Soil	MGLLNVTRIGRPAYLAAAALVLIFAGPAAAQTSIKFSLDGRLEGPEALVLLP
Ga0066669_109019021	3300018482	Grasslands Soil	MRLLKLTRIIHSASLVAALIALAVAWPAAAQTSIKFSLDGRLEGLAATF
Ga0193731_10126941	3300020001	Soil	MGLLNLTRIGRPAYLAAAALALVFSGPAAAQTGIKFSLDGRLEGPEALVLLPQDKG
Ga0179592_105238501	3300020199	Vadose Zone Soil	MRLLKLTRINRLASLVAALIALTVAWPAAAQTSIRFSLDGRL
Ga0210407_107538021	3300020579	Soil	MGPFNLTRIARHAYVFAAAIALMWASHAAAQTSIKFSLDG
Ga0210406_101480361	3300021168	Soil	MSLLDLTRIGRPALLFAAAITLTAAWPAAAQTSIKFSLDGRLEGLAATF
Ga0210406_108719101	3300021168	Soil	MSLLDLTRIGRPALLFAAAITLTAAWPAAAQTSIKFS
Ga0210409_110325011	3300021559	Soil	MSLLDLTRIVRPAHLFAAAITLTAAWPAAAQTSIKFSLDGRLEGLTATFLLPQDRGYF
Ga0207684_101215232	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSLLDLTRIVRPAHLFAAAITLTAAWPAAGQTSIKFSLDGR
Ga0207684_101918901	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSLLDLTRIVRPAHLFAAAITLTAAWPAAGQTSIKFSLDGRLE
Ga0207650_101674441	3300025925	Switchgrass Rhizosphere	MGLLNVTRIGRPAYLAAAALVLIFAGPAAAQTSIKFSLDGRL
Ga0207665_112937021	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MGLFNLTRIGRPAYLAAAALVLIFAGPAAAQTSIKFSLDGRLEGPEALVLLPQDRGY
Ga0209240_11318652	3300026304	Grasslands Soil	MGLLNLTRIDRGAYLVAAAIALMAAPPAAAQTNIKFS
Ga0257159_10393421	3300026494	Soil	MSLLDLTRIVRPALLFAAAITLTAAWPAAGQTSIKFSLDGRLDGLAA
Ga0209648_100270325	3300026551	Grasslands Soil	MSLLDLTRMVRPAHLFAAAITLTAAWPAAGQTSIKFSLDGRLEGLAAT
Ga0179587_104229252	3300026557	Vadose Zone Soil	MRLLKLTRINRLASLVAALIALTVAWPAAAQTSIRFSLDGRLEGLAATFFLPQDRGY
Ga0208761_10133231	3300026995	Soil	MGLLNVTRIGRPAYLAAAALVLIFAGPAAAQTSIKFSLDGRLEGPEALVLLPQDR
Ga0209689_10932492	3300027748	Soil	MSLLDLTRIVRPAHLFAAAITLTAAWPAAGQTSIKF
Ga0209177_105017011	3300027775	Agricultural Soil	MRLLKLTRINRPASLVAALIALTVAWPAAAQTSIRFSLDGRLEGLASTFF
Ga0209590_102527101	3300027882	Vadose Zone Soil	MSLLDLTRIVRPAHLFAAAITLTAAWPAAGQTSIKFSLDGRLEGLAATFFLPQ
Ga0209488_1000247615	3300027903	Vadose Zone Soil	MSLLDLTRIVRPAHLFAAAITLTAAWPAAGQTSIKFS
Ga0207428_104634792	3300027907	Populus Rhizosphere	MGLLNVTRIGRPAYLAAAALVLIFAGPAAAQTSIKFSLDGRLEGPEA
Ga0209526_100407101	3300028047	Forest Soil	MSLLDLTRIGRPALLFAAAITLTAAWPAAAQTSIKFSLDGRLEGLAATFFLPQDRG
Ga0307298_102491171	3300028717	Soil	MTFDPARIGRPVRQLAPAFALVAALASAWPAAAQTSMKLSLDGRLEGLAA
Ga0307301_102227102	3300028719	Soil	MGLLNVTRIGRPAYLAAAALVLIFAGPAAAQTSIKFSLDGRLEGP
Ga0307280_103916531	3300028768	Soil	MGPLNLTRIARHAYVFAAAISLMWASSHAAAQTSIKFSLDGRL
Ga0307323_102832491	3300028787	Soil	MGPLNLTRIARHAYVFAAAISLMWASSHAAAQTSIKFSLDGRLEGLVATFLFPQDRG
Ga0307503_100044351	3300028802	Soil	MGLLNVTRIGRPAYLAAAALVLIFAGPAAAQTSIKFSLDGRLEGPE
Ga0308187_101357831	3300031114	Soil	MGLNLTRIGRPAYLVAAALALVFSGPAVAQTGIKFSLDGRL
Ga0307501_101924771	3300031152	Soil	MGLLNLTRIGRPAYLAAAALALVFSGPAVAQTGIKFSLDGRLEGPEA
Ga0307498_100029981	3300031170	Soil	MGLLNLTRIGRPAYLAAAALALVFSGPAAAQTGIKFSLDG
Ga0307496_101424101	3300031200	Soil	MGLLNVTRIGRPAYLAAAALVLIFAGPAAAQTSIKFSLDGRLEGPEALV
Ga0307497_103640152	3300031226	Soil	MGLLNVTRIGRPAYLAAAALVLIFAGPAAAQTSIKFSLDGRLEGPEALVLLPQ
Ga0170819_148933972	3300031469	Forest Soil	MGLLNVTRIGRPAYLAAAALVLIFAGPAAAQTSIKFSLDGRLEGPEALVLLPQD
Ga0318516_102160392	3300031543	Soil	MGLLDLTRIVRPALLFAAAITLTAAWPAAGQTSIK
Ga0318528_100824122	3300031561	Soil	MGLLDLTRIVRPAPLFAAAITLTAAWPAAAQTSIK
Ga0318572_100546801	3300031681	Soil	MGLLNLMRIVRPAHFFAAAIALTTAWPAAAQTSIKFSLDGRLEGLAATFFLPQDRG
Ga0318572_101346942	3300031681	Soil	MSLLDLTRIVRPAPLFAAAITLTAAWPAAAQTSIK
Ga0318496_105510481	3300031713	Soil	MSLLDLTRIVRPALLFAAAITLTAAWPAAAQTSIKFSLDGRL
Ga0307468_1004924951	3300031740	Hardwood Forest Soil	MGLLDLTRIVRPAHLFAAAITLTAAWPAAGQTSIKF
Ga0318492_100981983	3300031748	Soil	MGLLDLTRIVRPAHLFAAAITLTAAGPAAGQTSIKFSLDGRLEGLAATFFLPQD
Ga0318535_102188481	3300031764	Soil	MRLLKLTRMDRPACVFAAAIALSAAWPAAAQTSIKFSLDGRLEGLAATF
Ga0318547_100256131	3300031781	Soil	MGLLDLTRIVRPALLFAAAITLTAAWPAAAQTSIKFSLDGRLEGLAA
Ga0318547_102669531	3300031781	Soil	MSLLDLTRIVRPALLFAAAITLTAAWPAAAQTSIKFSLDGRLE
Ga0318550_100808401	3300031797	Soil	MRLLKLTRMDRPACVFAAAIALSAAWPAAAQTSIKFSLDGRLEGLAA
Ga0318523_105522661	3300031798	Soil	MGLLDLTRIVRPAHLFAAAITLTATWPAAGQTSIKFSLDGRLEGLAATF
Ga0318497_103459571	3300031805	Soil	MRLLKLTRMDRPACVFAAAIALSAAWPAAAQTSIKFSLDGRLEGLAATFFLPQDRGY
Ga0306925_108577331	3300031890	Soil	MGLLDLTRIVRPALLFAAAITLTAAWPAAGQTSIKYSLDGRLEGLAATFFF
Ga0310891_103122041	3300031913	Soil	MGLLDFTRIGRPAYLLAVAFALVVAGPAAAQTSVKFSLDGRLEGPEAL
Ga0310909_106892662	3300031947	Soil	MSLLDLTRIVRPAPLFAAAITLTAAWPAAAQTSIKFSLDGRLEGLTATFFLPQD
Ga0306926_128116701	3300031954	Soil	MSLLDLARIVRPALLFAAAITLTAARPAAAQTSIKFSLDGRLEGL
Ga0306922_123763302	3300032001	Soil	MGLLDLTRIVRPAHLFAAAITLTAAGPAAGQTSIKFSLDGRLEGLA
Ga0318504_105338861	3300032063	Soil	MSLLDLTRIVRPAHLFAAAITLTAAWPAAGQTSIKFSLDGRLEGLAATFFLPQDRGYFKT
Ga0306924_103100701	3300032076	Soil	MSLLDLTRIVRHAHLFAAAITLTAAWPAAGQTSIKFSLDGRLEGLAATFFLPQDRGYF
Ga0318518_102761822	3300032090	Soil	MGLLDLTRIVRPAHLFAAAITLTAAWPAAGQTSIKFSLDGRLEGLAATFFLPQD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F058990

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences