NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F058897

Metagenome / Metatranscriptome Family F058897

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F058897
Family Type Metagenome / Metatranscriptome
Number of Sequences 134
Average Sequence Length 46 residues
Representative Sequence CPPCGEHFDFERLFLDFLRARCRAQGAPPELKRRILRELFEE
Number of Associated Samples 107
Number of Associated Scaffolds 134

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 2.99 %
% of genes near scaffold ends (potentially truncated) 97.01 %
% of genes from short scaffolds (< 2000 bps) 86.57 %
Associated GOLD sequencing projects 99
AlphaFold2 3D model prediction Yes
3D model pTM-score0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(24.627 % of family members)
Environment Ontology (ENVO) Unclassified
(51.493 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(56.716 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62
1JGI25384J37096_100091761
2JGI25384J37096_102401892
3JGI25382J43887_103542072
4JGI25382J43887_103718322
5Ga0055466_102858762
6Ga0066674_104158372
7Ga0066672_109202812
8Ga0066683_101168123
9Ga0066680_100271105
10Ga0066688_101774793
11Ga0066676_100537041
12Ga0066675_111410361
13Ga0070689_1008453102
14Ga0070691_101744803
15Ga0070687_1000033359
16Ga0070708_1004530361
17Ga0066686_105384592
18Ga0066681_107187251
19Ga0070698_1022230031
20Ga0070697_1018501901
21Ga0066697_103976272
22Ga0070704_1005011811
23Ga0066701_100576321
24Ga0066695_103256643
25Ga0066670_109157592
26Ga0066694_100338504
27Ga0066694_104187422
28Ga0066651_100974241
29Ga0066656_101752081
30Ga0066656_101806381
31Ga0079222_114734572
32Ga0066659_109598762
33Ga0075429_1018669991
34Ga0075426_111211851
35Ga0075436_1003362891
36Ga0099793_100397383
37Ga0099793_102074831
38Ga0066710_1036995072
39Ga0099829_100209983
40Ga0099829_109289081
41Ga0099830_115066511
42Ga0099828_104464053
43Ga0099828_107940932
44Ga0099827_103491941
45Ga0099827_105333291
46Ga0099827_110793252
47Ga0066709_1036338212
48Ga0126382_104821343
49Ga0126373_100997861
50Ga0134088_100244155
51Ga0134088_106584251
52Ga0134067_100119341
53Ga0134086_100043331
54Ga0134086_102968681
55Ga0134086_103288771
56Ga0134080_106601342
57Ga0134063_103652621
58Ga0134071_100637193
59Ga0134071_103765512
60Ga0126377_128466921
61Ga0134126_124686642
62Ga0137365_102086423
63Ga0137381_102529843
64Ga0137381_106039451
65Ga0137381_116263421
66Ga0137379_108987112
67Ga0137379_110512091
68Ga0137377_119318322
69Ga0137387_103161963
70Ga0137386_107701142
71Ga0137384_105392511
72Ga0137385_112734141
73Ga0137361_116712052
74Ga0134052_10278402
75Ga0134045_13588771
76Ga0137396_100070809
77Ga0137419_102898111
78Ga0137419_109855131
79Ga0137416_115818761
80Ga0137410_108021852
81Ga0137410_111518151
82Ga0134076_100013452
83Ga0134076_102551571
84Ga0134081_101333012
85Ga0134075_103649582
86Ga0134078_101387771
87Ga0134078_105433441
88Ga0137420_10549842
89Ga0137420_12135661
90Ga0134089_101045851
91Ga0134089_105622961
92Ga0134069_12339302
93Ga0134112_100351573
94Ga0134112_103121841
95Ga0134083_100635204
96Ga0134083_103223861
97Ga0134083_103983702
98Ga0184610_11496072
99Ga0184612_106075821
100Ga0066655_102694461
101Ga0066655_114155492
102Ga0066667_105133971
103Ga0193703_10419031
104Ga0193755_10004141
105Ga0179594_100539221
106Ga0210378_100283194
107Ga0137417_10692913
108Ga0210061_11046671
109Ga0207700_116539511
110Ga0208776_10181341
111Ga0209235_12495941
112Ga0209265_10537553
113Ga0209152_100075331
114Ga0209801_11906892
115Ga0209266_11090691
116Ga0209473_10848413
117Ga0209267_13302971
118Ga0209803_12320571
119Ga0209158_10654431
120Ga0209378_10621471
121Ga0209376_12547611
122Ga0209156_103424451
123Ga0209161_105142861
124Ga0209648_108372212
125Ga0209261_100725341
126Ga0209689_11225273
127Ga0209074_102880391
128Ga0247663_10615472
129Ga0137415_109032751
130Ga0307469_104890023
131Ga0326597_100919131
132Ga0326597_107185903
133Ga0364928_0150580_2_154
134Ga0364942_0311082_1_129
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 37.14%    β-sheet: 0.00%    Coil/Unstructured: 62.86%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

510152025303540CPPCGEHFDFERLFLDFLRARCRAQGAPPELKRRILRELFEESequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.48
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
100.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Groundwater Sediment
Wetland Sediment
Natural And Restored Wetlands
Groundwater Sediment
Soil
Vadose Zone Soil
Terrestrial Soil
Tropical Forest Soil
Grasslands Soil
Agricultural Soil
Soil
Grasslands Soil
Soil
Hardwood Forest Soil
Rice Paddy Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Switchgrass Rhizosphere
Sediment
Populus Rhizosphere
3.0%24.6%19.4%23.9%8.2%4.5%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25384J37096_1000917613300002561Grasslands SoilTPAVEQEIRQHIADCPPCGEEFDFEKLFLGFLRARCRAQGAPPDLKRRILDELLDE*
JGI25384J37096_1024018923300002561Grasslands SoilVEQEIRAHLAECPPCGEEFDFERLFLTFLRARCRAQGAPPDLKRRILRELFDE*
JGI25382J43887_1035420723300002908Grasslands SoilVEQEIRQHLTDCPPCGEVFDFEXLFLGFLRARCRAQGAPADLKRRILDELFDE*
JGI25382J43887_1037183223300002908Grasslands SoilCGEHFDFERVFLTFLRARSRAQGAPPELKRRILRELFDE*
Ga0055466_1028587623300003997Natural And Restored WetlandsHLEECPPCGEQFDFEAIYLKFLRARCRTQGAPEELKRRVLRELFGE*
Ga0066674_1041583723300005166SoilEREIRAHLAECPPCGEHHDFEALFLKFVRARCRAQGAPAELRRRIARELFEE*
Ga0066672_1092028123300005167SoilHLEDCPPCGEQFDFEELFLKFLRARCRAQGAPPELKKRVLRELFGE*
Ga0066683_1011681233300005172SoilEVEREIRTHLEDCPPCGEHFDFERLFLDFLQARCRARGAPPDLKRRILRELFDE*
Ga0066680_1002711053300005174SoilSVMEEIRQHVAECPPCGESFDFEKVFLTFVRARCRAQGASPELRRRILDELLDE*
Ga0066688_1017747933300005178SoilPPCGEVFDFEKLFLGFLRARCRAQGAPADLKRRILDELFDE*
Ga0066676_1005370413300005186SoilDCPPCGEHFDFEKLFLDFLRARCRAHGAPPELKRKILRDLFGA*
Ga0066675_1114103613300005187SoilLTDCPPCGEVFDFEKLFLGFLRARCRAQGAPADLKRRILDELFDE*
Ga0070689_10084531023300005340Switchgrass RhizosphereCPPCDEQYDFEELFLKFLRARCRTQGAPAELKKRVFRELFGE*
Ga0070691_1017448033300005341Corn, Switchgrass And Miscanthus RhizosphereEDCPPCDEQYDFEELFLKFLRARCRTQGAPAELKKRVFRELFGE*
Ga0070687_10000333593300005343Switchgrass RhizosphereLEDCPPCDEQYDFEELFLKFLRARCRTQGAPAELKKRVFRELFGE*
Ga0070708_10045303613300005445Corn, Switchgrass And Miscanthus RhizospherePCGEQFDFEELFLKFLRARCRAEGAPPELKKRVLRELFGE*
Ga0066686_1053845923300005446SoilHLADCPPCGEHFDFEKLFLDFLRARCRAHGAPPELKRKILRDLFGE*
Ga0066681_1071872513300005451SoilCGEQYDFEELFLKFLRARCRTQGAPAELKKRVLRELFGE*
Ga0070698_10222300313300005471Corn, Switchgrass And Miscanthus RhizosphereCGEQFDFETIYLKFLRARCRTQGAPAELKRRVMRELFGE*
Ga0070697_10185019013300005536Corn, Switchgrass And Miscanthus RhizosphereEEIRQHVAECPPCGESFDFEKVFLTFVRARCRAQGASPELRRRILDELLDE*
Ga0066697_1039762723300005540SoilEIRQHLADCPPCGEHFDFERLFLDFLRARCRAHGAPAELKRRILRELFDE*
Ga0070704_10050118113300005549Corn, Switchgrass And Miscanthus RhizosphereEDCPPCDEQYDFEELFLKFLRARCRTQGAPAELKKRVLRELFGE*
Ga0066701_1005763213300005552SoilDCPPCGEEFDFEKLFLGFLKARCRAQGAPADLKRRILDELLDE*
Ga0066695_1032566433300005553SoilYDFEELFLKFLRARCRTQGAPAELKKRVLRELFGE*
Ga0066670_1091575923300005560SoilPCEEQYDFEELFLKFLRARCRTQGAPPELKKRVLRELFGE*
Ga0066694_1003385043300005574SoilQEIRQHIADCPPCGEEFDFEKLFLGFLKARCRAQGAPADLKRRILDELLDE*
Ga0066694_1041874223300005574SoilGESFDFEKVFLTFVRARCRAHGASPELRRRILDELLDE*
Ga0066651_1009742413300006031SoilCPPCGEHFDFERLFLDFLRARCRAHGAPAELKRRILRELFDE*
Ga0066656_1017520813300006034SoilPQVEREIRAHIADCPPCGEHFDFERVFLTFLRARSRAQGAPPDLKRRILRELFDE*
Ga0066656_1018063813300006034SoilCPPCGEQFDFESLFLKFLRARCRAQGAPPELKRRLLHDLFGE*
Ga0079222_1147345723300006755Agricultural SoilCPPCGHKFDFEAAFKKFVQARTRAQGCPPELKQRILRELFDE*
Ga0066659_1095987623300006797SoilCGEHFDFERLFLDFLRARCRAKGAPPELKRRILDELLDE*
Ga0075429_10186699913300006880Populus RhizosphereLERDIREHLEECPPCGEQFDFEAVYLKFLRARCRTQGAPEDLKRRVLRELFGE*
Ga0075426_1112118513300006903Populus RhizosphereEHFDFERVFLTFLRARCRAQGAPPELKRRILRELFEE*
Ga0075436_10033628913300006914Populus RhizosphereVEQEIRQHIADCPPCGEEFDFEKLFLGFLRARCRAHGAPPDLKRRILDELLDE*
Ga0099793_1003973833300007258Vadose Zone SoilCGDHFDFERLFLDFLRARCRAQGAPSDLKLRILRELFDE*
Ga0099793_1020748313300007258Vadose Zone SoilDCPPCGEQYDFEELFLKFLRARCKTQGAPAELKKRVLRELFGE*
Ga0066710_10369950723300009012Grasslands SoilVEQEIRQHLADCPPCGEHFDFEKLFLDFLRARCRAHGAPPELKRKILRDLFGA
Ga0099829_1002099833300009038Vadose Zone SoilLEDCPPCGEQYDFEELFLKFLRARCRTQGAPAELKKRVLRELFGE*
Ga0099829_1092890813300009038Vadose Zone SoilEIRQHIADCPPCGEEFDFEKLFLGFLRARCRAQGAPPDLKRRILDELLDE*
Ga0099830_1150665113300009088Vadose Zone SoilPCGEQYDFEELFLKFLRARCRAQGAPAELKKRVLRELFGE*
Ga0099828_1044640533300009089Vadose Zone SoilYDFEELFLKFLRARCKTQGAPAELKKRVLRELFGE*
Ga0099828_1079409323300009089Vadose Zone SoilINSIRAHLAECPPCGEEFDFERLFLTFLRARCRAQGAPPDLKRRILRELFDE*
Ga0099827_1034919413300009090Vadose Zone SoilRVHLEDCPPCGEHFDFERLFLDFLQARCRARGAPPDLKRRILRELFDE*
Ga0099827_1053332913300009090Vadose Zone SoilRVHLEDCPPCGEHFDFERLFLDFLQARCRARGAPPDLKRRILRDLFDE*
Ga0099827_1107932523300009090Vadose Zone SoilGEQYDFEELFLKFLRARCRTQGAPADLKKRVLRELFGE*
Ga0066709_10363382123300009137Grasslands SoilVEQEIRQHLTDCPPCGEQFDFEKLFLGFLRARCRAQGAPADLKRRILDELLDE*
Ga0126382_1048213433300010047Tropical Forest SoilDFETLFLKFVRVRCRAQGAPATLRHRILEQLLEE*
Ga0126373_1009978613300010048Tropical Forest SoilPCGTKFDFEAAFKKFVQAKSRAQGCPPELKQRILRELFDE*
Ga0134088_1002441553300010304Grasslands SoilLTPAVEQEIRQHIADCPPCGEEFDFEKLFLGFLRARCRAQGAPPDLKRRILDELLDE*
Ga0134088_1065842513300010304Grasslands SoilPAVEQEIRQHIADCPPCGEEFDFEKLFLGFLRARCRAQGAPPDLKRRILDELLDE*
Ga0134067_1001193413300010321Grasslands SoilQEIRQHLADCPPCGEHFDFERLFLDFLRARCRAEGAPPELKRRILRELFDE*
Ga0134086_1000433313300010323Grasslands SoilQHIVDCPPCGEHFDFERLFLDFLRARCRAKGAPPELKRRILDELLDE*
Ga0134086_1029686813300010323Grasslands SoilQFDFEKLFLGFLRARCRAQGAPADLKRRILDELLDE*
Ga0134086_1032887713300010323Grasslands SoilREIRTHLEDCPPCCEHFDFERLFLDFLQARCRARGAPPDLKRRILRELFDE*
Ga0134080_1066013423300010333Grasslands SoilDFEKLFLGFLKARCRAQGAPADLKRRILDELLDE*
Ga0134063_1036526213300010335Grasslands SoilVEQEIRQHLTDCPPCGEQFDFEKLFFGFLRARCRAEGAPADLKRRILDELFDE*
Ga0134071_1006371933300010336Grasslands SoilHLEDCPPCGEHFDFERLFLDFLQARCRARGAPPDLKRRILRELFDE*
Ga0134071_1037655123300010336Grasslands SoilCPPCGEHFDFERLFLDFLRARCRAQGAPPELKRRILRELFEE*
Ga0126377_1284669213300010362Tropical Forest SoilLEAEMRAHIQKCPPCSEHFDFETLFLKFVRVRCRAQGAPATLRHRILEQLLEE*
Ga0134126_1246866423300010396Terrestrial SoilCGTKFDFEGAFKKFVQARTRAQGCPPELKQRILRELFDE*
Ga0137365_1020864233300012201Vadose Zone SoilQHVAECPPCGESFDFEKVFLTFVRARCRAQGASPELRRRILDELLDE*
Ga0137381_1025298433300012207Vadose Zone SoilPCLEQFDFEDAFLKFLQARCCGRCAPPELKRRILHELFGE*
Ga0137381_1060394513300012207Vadose Zone SoilHVEREIRQHLAECPPCGEHFDFERLFLDFLRARCRAQGAPTELKHRILRDLFDE*
Ga0137381_1162634213300012207Vadose Zone SoilELTPVVEQEIRQHLTDCPPCGEVFDFEKLFLGFLRARCRAQGAPADLKRRILDELFDE*
Ga0137379_1089871123300012209Vadose Zone SoilPCGEEFDFEKLFLGFLRARCRAQGAPPDLKRRILDELLDE*
Ga0137379_1105120913300012209Vadose Zone SoilEFDFEKLFLGFLRARCRAQGAPPDLKRRILDELLDE*
Ga0137377_1193183223300012211Vadose Zone SoilRAHLEDCPPCGEQFDFEELFLKFLRARCRAQGAPQELKKRVLRELFGE*
Ga0137387_1031619633300012349Vadose Zone SoilCPPCGEHFDFEKLFLDFLRARCRAHGAPPELKRKILRDLFGA*
Ga0137386_1077011423300012351Vadose Zone SoilGEEFDFEKLFLGFLRARCRAQGAPPDLKRRILDELLDE*
Ga0137384_1053925113300012357Vadose Zone SoilIRQHIADCPPCGEEFDFEKLFLGFLRARCRAQGAPPDLKRRILDELLDE*
Ga0137385_1127341413300012359Vadose Zone SoilIRQHIADCPPCGEEFDFEKLFLGFLRARCRAEGAPADLKRRILDELFDE*
Ga0137361_1167120523300012362Vadose Zone SoilPCGEQYDFEELFLKFLRARCRTQGAPAELKKRVLRELFGE*
Ga0134052_102784023300012393Grasslands SoilCPPCGEEFDFEKLFLGFLRARCRAQGAPPDLKRRILDELLDE*
Ga0134045_135887713300012409Grasslands SoilRQHIADCPPCGEEFDFEKLFLGFLRARCRAQGAPPDLKRRILDELLDE*
Ga0137396_1000708093300012918Vadose Zone SoilVEKEIRQHLSDCPPCGEQFDFEKLFLGFLRARCQAQGAPPELKRRILDELLDE*
Ga0137419_1028981113300012925Vadose Zone SoilFDFEELFLKFVRARCRAQGAPAELKKRVLRELFGE*
Ga0137419_1098551313300012925Vadose Zone SoilIRAHLEDCPPCEEQYDFEELFLKFLRARCKTQGAPTELKKRVLRELFGE*
Ga0137416_1158187613300012927Vadose Zone SoilLEECPPCGEQFDFEAVYLKFLRARCRTQGAPEELKRRVLRELFGE*
Ga0137410_1080218523300012944Vadose Zone SoilEECPPCGEQFDFEAIYLKFLRARCRTQGAPEALKRRVLRELFGE*
Ga0137410_1115181513300012944Vadose Zone SoilEQFDFEKLFLGFLKARCRAQGAPADLKRRILDELLDE*
Ga0134076_1000134523300012976Grasslands SoilVEQEIRQHLADCPPCGEHFDFERLFLDFLRARCRAHGAPAELKRRILRELFDE*
Ga0134076_1025515713300012976Grasslands SoilPCGEQYDFEELFLKLLRARCRAQGAPAELKKRVLRELFGE*
Ga0134081_1013330123300014150Grasslands SoilPAVAEEIRQHIAECPPCGENFDFEKVFLTFVRARCRAHGASPDLRRRILDELLDE*
Ga0134075_1036495823300014154Grasslands SoilVEQEIRQHLTDCPPCGEAFDFEKLFLGFLRARCRAQGAPADLKRRILDELFDE*
Ga0134078_1013877713300014157Grasslands SoilKQHIVDCPPCGEHFDFERLFLDFLRARCRAKGAPPELKRRILDELLDE*
Ga0134078_1054334413300014157Grasslands SoilHIADCPPCGEEFDFEKLFLGFLRARCRAQGAPPDLKRRILDELLDE*
Ga0137420_105498423300015054Vadose Zone SoilEQEIRQHIADCPPCGEEFDFEKLFLGFLRARCRAQGAPPDLKRRILDELLDE*
Ga0137420_121356613300015054Vadose Zone SoilSRRRLTPAVEQEIRQHLTDCPPCGEQFDFEKLFLGFLRARCQAQGAPPELKRRILDELLDE*
Ga0134089_1010458513300015358Grasslands SoilFDFEKLFLGFLRARCRAQGAPADLKRRILDELLDE*
Ga0134089_1056229613300015358Grasslands SoilQEIRQHIADCPPCGEEFDFEKLFLGFLRARCRAQGAPPDLKRRILDELLDE*
Ga0134069_123393023300017654Grasslands SoilDCPPCGEHFDFERLFLDFLRARCRAEGAPPELKRRILRELFDE
Ga0134112_1003515733300017656Grasslands SoilPPCGEQFDFEELFLKFLRARCRAEGASPELKKRVLRELFGE
Ga0134112_1031218413300017656Grasslands SoilDCPPCGEHFDFEKLFLDFLRARCRAHGAPPELKRKILRDLFGE
Ga0134083_1006352043300017659Grasslands SoilQEIRQHLADCPPCGEHFDFEKLFLDFLRARCRAQGAPPELKRRILGELFDE
Ga0134083_1032238613300017659Grasslands SoilQHLTDCPPCGEAFDFEKLFLGFLRARCRAQGAPADLKRRILDELFDE
Ga0134083_1039837023300017659Grasslands SoilREHLADCPPCGEHFDFERLFLDFLRARCRAQGAPPELKRRILRELFEE
Ga0184610_114960723300017997Groundwater SedimentREHLEDCPPCGEQFDFEELFLKFLRARCRSQGAPTELKKRVLRELFGE
Ga0184612_1060758213300018078Groundwater SedimentREATPALERDIRQHLEECPPCGEQFNFEAVYLKFLRARCRTQGASPELKRRVLRELFGE
Ga0066655_1026944613300018431Grasslands SoilFDFEKLFLGFLRARCRAQGAPADLKRRILDELLDE
Ga0066655_1141554923300018431Grasslands SoilCPPCGEQFDFEALFLKFVRARCLTQGAPPELKRRVLLELFGDE
Ga0066667_1051339713300018433Grasslands SoilLTDCPPCGEVFDFEKLFLGFLRARCRAQGAPADLKRRILDELFDE
Ga0193703_104190313300019876SoilPCGEQYDFEELFLKFLRARCRTQGAPADLKKRVLRELFGE
Ga0193755_100041413300020004SoilCEEQYDFEELFLKFLRARCKTQGAPTELKKRVLRELFGE
Ga0179594_1005392213300020170Vadose Zone SoilQYDFEELFLKFLRARCRAQGAPPELKKRVLRELFGE
Ga0210378_1002831943300021073Groundwater SedimentDCPPCGEQFDFEELFLKFLRARCRSQGAPTELKKRVLRELFGE
Ga0137417_106929133300024330Vadose Zone SoilIRDHLEDCPPCGEQYDFEELYLKFLRARCRTQGAPTELKKRVLRQLFGE
Ga0210061_110466713300025537Natural And Restored WetlandsHLEECPPCGEQFDFEAIYLKFLRARCRTQGAPEELKRRVLRELFGE
Ga0207700_1165395113300025928Corn, Switchgrass And Miscanthus RhizospherePPCGESFDFEKVFLTFVRARCRAQGASPELRRRILDELLDE
Ga0208776_101813413300026014Rice Paddy SoilEECPPCGEHFDFEKLFLDFLKTRCRVHGAPPELKRRIFDELFGE
Ga0209235_124959413300026296Grasslands SoilPCGEQFDFEELFLKFLRARCRAEGASPELKKRVLRELFGE
Ga0209265_105375533300026308SoilCGEVFDFEKLFLGFLRARCRAQGAPADLKRRILDELFDE
Ga0209152_1000753313300026325SoilPCGDSFDFEKVFLTFVRARCSAHGASPELRRRILDELLDE
Ga0209801_119068923300026326SoilPCGEHFDFERLFLDFLRARCRAQGAPSELKLRILRELFDE
Ga0209266_110906913300026327SoilGEVFDFEKLFLGFLRARCRAQGAPADLKRRILDELFDE
Ga0209473_108484133300026330SoilQVEQEIRQHLADCPPCGEHFDFERLFLDFLRARCRAEGAPPELKRRILRELFDE
Ga0209267_133029713300026331SoilQHIADCPPCGEEFDFEKLFLGFLRARCRAQGAPPDLKRRILDELLDE
Ga0209803_123205713300026332SoilCGEHFDFERLFLDFLQARCRARGAPPDLKRRILRELFDE
Ga0209158_106544313300026333SoilPPCGEHFDFERLFLDFLQARCRARGAPPELKRRILRELFDE
Ga0209378_106214713300026528SoilAVEQEIRQHIADCPPCGEEFDFEKLFLGFLRARCRAQGAPPDLKRRILDELLDE
Ga0209376_125476113300026540SoilEIRQHLADCPPCGEHFDFERLFLDFLRARCRAQGAPAELKLRILRELFDE
Ga0209156_1034244513300026547SoilEFDFEKLFLGFLRARCRAQGAPADLKRRILDELLDE
Ga0209161_1051428613300026548SoilSFDFEKVFLTFVRARCSAHGASPELRRRILDELLDE
Ga0209648_1083722123300026551Grasslands SoilREHLADCEPCGEHFDFEGMFLRFLRARCRAQGAPQELKRRLLHDLFGE
Ga0209261_1007253413300027735Wetland SedimentREIREHLEDCPPCGEQYDFEELFLKFLRARCRTQGAPPELKKRVFRELFGE
Ga0209689_112252733300027748SoilCRPCLEQFDFEDAFLKFLQARCRARCAPPELKRRILHELFGE
Ga0209074_1028803913300027787Agricultural SoilEIREHLSHCPPCGHKFDFEAAFKKFVQARTRAQGCPPELKQRILRELFDE
Ga0247663_106154723300028145SoilDREVTPELETEIRAHIQKCPPCSEHFDFETLFLKFVRVRCRAQGAPATLRRRILEQLLEE
Ga0137415_1090327513300028536Vadose Zone SoilHLEECPPCGEQFDFEAVYLKFLRARCRTQGAPEELKRRVLRELFGE
Ga0307469_1048900233300031720Hardwood Forest SoilQEIRQHIADCPPCGEEFDFEKLFLGFLRARCRAQGAPPDLKRRILDELLDE
Ga0326597_1009191313300031965SoilRRHLEECPPCGEQFDFEAVYLKFLRARCRAQGAPPELKRRLLQELFGE
Ga0326597_1071859033300031965SoilRRHLEECPPCGEQFDFEAVYLKFLRARCRAQGAPPELKRRLLRELFGE
Ga0364928_0150580_2_1543300033813SedimentEIREHLEDCPPCDEQFDFEELFLKFLRARCRTQGAPTELKKRVLRELFGE
Ga0364942_0311082_1_1293300034165SedimentCAPCDEQFDFEAVFLKFLRARCRTQGAPPELKRRVLRELFGE


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.