NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F058888

Metagenome Family F058888

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F058888
Family Type Metagenome
Number of Sequences 134
Average Sequence Length 112 residues
Representative Sequence MRRAGGLLLLVATLAGCATTPPSVGSLAGEWHGRVSTPRGHTTARLTIAPDGRYEGTAYFDGLDRPLHGAIVTLPSGLLRYVGSEGDGTVTVDDGMLRLRGDDGATGARFTRQP
Number of Associated Samples 103
Number of Associated Scaffolds 134

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 51.88 %
% of genes near scaffold ends (potentially truncated) 25.37 %
% of genes from short scaffolds (< 2000 bps) 62.69 %
Associated GOLD sequencing projects 87
AlphaFold2 3D model prediction Yes
3D model pTM-score0.73

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (99.254 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(38.060 % of family members)
Environment Ontology (ENVO) Unclassified
(57.463 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(74.627 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 7.75%    β-sheet: 43.66%    Coil/Unstructured: 48.59%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.73
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
b.61.4.1: Quinohemoprotein amine dehydrogenase A chain, domain 3d1jmxa51jmx0.75666
b.61.4.1: Quinohemoprotein amine dehydrogenase A chain, domain 3d1pbya51pby0.75278
b.60.1.1: Retinol binding protein-liked1kt7a_1kt70.73578
b.60.1.8: Rv2717c-liked3wjda_3wjd0.72395
b.60.1.1: Retinol binding protein-liked1gkab_1gka0.72363


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 134 Family Scaffolds
PF00950ABC-3 36.57
PF02416TatA_B_E 14.93
PF01297ZnuA 10.45
PF14235DUF4337 8.21
PF12732YtxH 3.73
PF06103DUF948 1.49
PF01642MM_CoA_mutase 1.49
PF01545Cation_efflux 1.49
PF02817E3_binding 0.75
PF02771Acyl-CoA_dh_N 0.75
PF13432TPR_16 0.75
PF01039Carboxyl_trans 0.75

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 134 Family Scaffolds
COG0609ABC-type Fe3+-siderophore transport system, permease componentInorganic ion transport and metabolism [P] 36.57
COG1108ABC-type Mn2+/Zn2+ transport system, permease componentInorganic ion transport and metabolism [P] 36.57
COG4606ABC-type enterochelin transport system, permease componentInorganic ion transport and metabolism [P] 36.57
COG1826Twin-arginine protein secretion pathway components TatA and TatBIntracellular trafficking, secretion, and vesicular transport [U] 14.93
COG0053Divalent metal cation (Fe/Co/Zn/Cd) efflux pumpInorganic ion transport and metabolism [P] 1.49
COG1230Co/Zn/Cd efflux system componentInorganic ion transport and metabolism [P] 1.49
COG1884Methylmalonyl-CoA mutase, N-terminal domain/subunitLipid transport and metabolism [I] 1.49
COG3965Predicted Co/Zn/Cd cation transporter, cation efflux familyInorganic ion transport and metabolism [P] 1.49
COG4768Uncharacterized conserved protein YoxC, contains an MCP-like domainFunction unknown [S] 1.49
COG0508Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) componentEnergy production and conversion [C] 0.75
COG0777Acetyl-CoA carboxylase beta subunitLipid transport and metabolism [I] 0.75
COG0825Acetyl-CoA carboxylase alpha subunitLipid transport and metabolism [I] 0.75
COG1960Acyl-CoA dehydrogenase related to the alkylation response protein AidBLipid transport and metabolism [I] 0.75
COG4799Acetyl-CoA carboxylase, carboxyltransferase componentLipid transport and metabolism [I] 0.75


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.25 %
UnclassifiedrootN/A0.75 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002560|JGI25383J37093_10021235All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2176Open in IMG/M
3300002561|JGI25384J37096_10073707All Organisms → cellular organisms → Bacteria1247Open in IMG/M
3300002561|JGI25384J37096_10075893All Organisms → cellular organisms → Bacteria1225Open in IMG/M
3300002562|JGI25382J37095_10024224All Organisms → cellular organisms → Bacteria2369Open in IMG/M
3300002908|JGI25382J43887_10007403All Organisms → cellular organisms → Bacteria → Proteobacteria5400Open in IMG/M
3300002908|JGI25382J43887_10062753All Organisms → cellular organisms → Bacteria2012Open in IMG/M
3300003203|JGI25406J46586_10011903All Organisms → cellular organisms → Bacteria3795Open in IMG/M
3300004633|Ga0066395_10990991All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium512Open in IMG/M
3300005166|Ga0066674_10003129All Organisms → cellular organisms → Bacteria6196Open in IMG/M
3300005167|Ga0066672_10124590All Organisms → cellular organisms → Bacteria1596Open in IMG/M
3300005171|Ga0066677_10005104All Organisms → cellular organisms → Bacteria → Proteobacteria5273Open in IMG/M
3300005171|Ga0066677_10109385All Organisms → cellular organisms → Bacteria1473Open in IMG/M
3300005174|Ga0066680_10901343All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseovarius → Roseovarius nubinhibens524Open in IMG/M
3300005175|Ga0066673_10371193All Organisms → cellular organisms → Bacteria835Open in IMG/M
3300005176|Ga0066679_10055275All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2300Open in IMG/M
3300005178|Ga0066688_10241664All Organisms → cellular organisms → Bacteria → Proteobacteria1154Open in IMG/M
3300005179|Ga0066684_10111350All Organisms → cellular organisms → Bacteria → Proteobacteria1692Open in IMG/M
3300005179|Ga0066684_10182543All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1349Open in IMG/M
3300005184|Ga0066671_10623295All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria700Open in IMG/M
3300005186|Ga0066676_10007628All Organisms → cellular organisms → Bacteria5156Open in IMG/M
3300005186|Ga0066676_10016184All Organisms → cellular organisms → Bacteria3800Open in IMG/M
3300005332|Ga0066388_100213859All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2554Open in IMG/M
3300005332|Ga0066388_100495534All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1858Open in IMG/M
3300005332|Ga0066388_106137897All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium607Open in IMG/M
3300005446|Ga0066686_10013284All Organisms → cellular organisms → Bacteria4381Open in IMG/M
3300005450|Ga0066682_10153141All Organisms → cellular organisms → Bacteria1468Open in IMG/M
3300005451|Ga0066681_10060507All Organisms → cellular organisms → Bacteria2093Open in IMG/M
3300005451|Ga0066681_10116598All Organisms → cellular organisms → Bacteria1542Open in IMG/M
3300005467|Ga0070706_100918973All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium808Open in IMG/M
3300005552|Ga0066701_10196255All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1236Open in IMG/M
3300005553|Ga0066695_10550400All Organisms → cellular organisms → Bacteria → Proteobacteria701Open in IMG/M
3300005554|Ga0066661_10138887All Organisms → cellular organisms → Bacteria → Proteobacteria1480Open in IMG/M
3300005555|Ga0066692_10480071All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium792Open in IMG/M
3300005557|Ga0066704_10011393All Organisms → cellular organisms → Bacteria → Proteobacteria4940Open in IMG/M
3300005560|Ga0066670_10071159All Organisms → cellular organisms → Bacteria1870Open in IMG/M
3300005561|Ga0066699_10284003All Organisms → cellular organisms → Bacteria → Proteobacteria1175Open in IMG/M
3300005566|Ga0066693_10037595All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1565Open in IMG/M
3300005566|Ga0066693_10109529All Organisms → cellular organisms → Bacteria1005Open in IMG/M
3300005568|Ga0066703_10362264All Organisms → cellular organisms → Bacteria870Open in IMG/M
3300005575|Ga0066702_10336785All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria918Open in IMG/M
3300005576|Ga0066708_10270877All Organisms → cellular organisms → Bacteria1083Open in IMG/M
3300005598|Ga0066706_10920465All Organisms → cellular organisms → Bacteria680Open in IMG/M
3300005713|Ga0066905_100062504All Organisms → cellular organisms → Bacteria2350Open in IMG/M
3300005713|Ga0066905_101016333All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium732Open in IMG/M
3300005764|Ga0066903_101536400All Organisms → cellular organisms → Bacteria1259Open in IMG/M
3300006031|Ga0066651_10113171All Organisms → cellular organisms → Bacteria1383Open in IMG/M
3300006034|Ga0066656_10169257All Organisms → cellular organisms → Bacteria1377Open in IMG/M
3300006046|Ga0066652_100417767All Organisms → cellular organisms → Bacteria → Proteobacteria1226Open in IMG/M
3300006049|Ga0075417_10019409All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria2689Open in IMG/M
3300006791|Ga0066653_10005488All Organisms → cellular organisms → Bacteria → Proteobacteria4101Open in IMG/M
3300006796|Ga0066665_10271449All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1351Open in IMG/M
3300006844|Ga0075428_100071929All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria3780Open in IMG/M
3300006846|Ga0075430_100103644All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria2375Open in IMG/M
3300006880|Ga0075429_100027717All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria4916Open in IMG/M
3300006880|Ga0075429_100208112All Organisms → cellular organisms → Bacteria1714Open in IMG/M
3300007255|Ga0099791_10004708All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria5611Open in IMG/M
3300007265|Ga0099794_10208344All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1002Open in IMG/M
3300007265|Ga0099794_10290861All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium845Open in IMG/M
3300009012|Ga0066710_101668988All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium972Open in IMG/M
3300009012|Ga0066710_103567067All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium587Open in IMG/M
3300009137|Ga0066709_101435502All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1001Open in IMG/M
3300009147|Ga0114129_10072075All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium4816Open in IMG/M
3300009792|Ga0126374_10454411All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium911Open in IMG/M
3300010046|Ga0126384_10015248All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium4867Open in IMG/M
3300010359|Ga0126376_11947161All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium628Open in IMG/M
3300010360|Ga0126372_10431269All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1214Open in IMG/M
3300010361|Ga0126378_11167983All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium869Open in IMG/M
3300010366|Ga0126379_13377921All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium535Open in IMG/M
3300010366|Ga0126379_13830068All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium504Open in IMG/M
3300010398|Ga0126383_13563507All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium508Open in IMG/M
3300012206|Ga0137380_10003215All Organisms → cellular organisms → Bacteria14175Open in IMG/M
3300012207|Ga0137381_10028011All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria4523Open in IMG/M
3300012208|Ga0137376_10481614All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1077Open in IMG/M
3300012918|Ga0137396_10021547All Organisms → cellular organisms → Bacteria4146Open in IMG/M
3300012918|Ga0137396_10147837All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1709Open in IMG/M
3300012922|Ga0137394_10537392All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium991Open in IMG/M
3300012923|Ga0137359_11164771All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium658Open in IMG/M
3300012929|Ga0137404_10025881All Organisms → cellular organisms → Bacteria4291Open in IMG/M
3300012929|Ga0137404_10075953All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2652Open in IMG/M
3300012929|Ga0137404_10471363All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1116Open in IMG/M
3300012929|Ga0137404_10675086All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium933Open in IMG/M
3300012948|Ga0126375_11357671All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium600Open in IMG/M
3300015245|Ga0137409_10941750All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium700Open in IMG/M
3300015359|Ga0134085_10005488All Organisms → cellular organisms → Bacteria4602Open in IMG/M
3300015371|Ga0132258_10129109All Organisms → cellular organisms → Bacteria6023Open in IMG/M
3300015373|Ga0132257_101412150All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium886Open in IMG/M
3300017654|Ga0134069_1000735All Organisms → cellular organisms → Bacteria8308Open in IMG/M
3300017657|Ga0134074_1010480All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2986Open in IMG/M
3300017657|Ga0134074_1151409All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium811Open in IMG/M
3300017657|Ga0134074_1369932All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium531Open in IMG/M
3300017659|Ga0134083_10025742All Organisms → cellular organisms → Bacteria2113Open in IMG/M
3300018431|Ga0066655_10002923All Organisms → cellular organisms → Bacteria6582Open in IMG/M
3300018431|Ga0066655_11411290All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium506Open in IMG/M
3300018433|Ga0066667_10047846All Organisms → cellular organisms → Bacteria2558Open in IMG/M
3300018433|Ga0066667_10228813All Organisms → cellular organisms → Bacteria1391Open in IMG/M
3300018433|Ga0066667_11693670All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium567Open in IMG/M
3300018468|Ga0066662_10088231All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2149Open in IMG/M
3300018482|Ga0066669_10008807All Organisms → cellular organisms → Bacteria4989Open in IMG/M
3300018482|Ga0066669_10081991All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2174Open in IMG/M
3300019789|Ga0137408_1166072All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1813Open in IMG/M
3300020170|Ga0179594_10021064All Organisms → cellular organisms → Bacteria1981Open in IMG/M
3300020199|Ga0179592_10463771All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium546Open in IMG/M
3300024330|Ga0137417_1347615All Organisms → cellular organisms → Bacteria7014Open in IMG/M
3300025910|Ga0207684_10716089All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium850Open in IMG/M
3300026296|Ga0209235_1001410All Organisms → cellular organisms → Bacteria12986Open in IMG/M
3300026296|Ga0209235_1037065All Organisms → cellular organisms → Bacteria2462Open in IMG/M
3300026310|Ga0209239_1078968All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1425Open in IMG/M
3300026316|Ga0209155_1034649All Organisms → cellular organisms → Bacteria → Proteobacteria2027Open in IMG/M
3300026316|Ga0209155_1049619All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1636Open in IMG/M
3300026316|Ga0209155_1115183All Organisms → cellular organisms → Bacteria945Open in IMG/M
3300026318|Ga0209471_1013732All Organisms → cellular organisms → Bacteria4199Open in IMG/M
3300026318|Ga0209471_1161236All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium913Open in IMG/M
3300026324|Ga0209470_1018554All Organisms → cellular organisms → Bacteria3824Open in IMG/M
3300026330|Ga0209473_1095891All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1241Open in IMG/M
3300026331|Ga0209267_1266544All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium583Open in IMG/M
3300026332|Ga0209803_1006625All Organisms → cellular organisms → Bacteria6470Open in IMG/M
3300026342|Ga0209057_1117687All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1007Open in IMG/M
3300026529|Ga0209806_1051584All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1930Open in IMG/M
3300026530|Ga0209807_1223120All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium645Open in IMG/M
3300026530|Ga0209807_1227212All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium637Open in IMG/M
3300026532|Ga0209160_1055777All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2245Open in IMG/M
3300026537|Ga0209157_1025364All Organisms → cellular organisms → Bacteria3549Open in IMG/M
3300026538|Ga0209056_10022297All Organisms → cellular organisms → Bacteria6150Open in IMG/M
3300026542|Ga0209805_1114294All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1280Open in IMG/M
3300026542|Ga0209805_1179936All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium937Open in IMG/M
3300026547|Ga0209156_10147791All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1140Open in IMG/M
3300026548|Ga0209161_10358378All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium651Open in IMG/M
3300026550|Ga0209474_10018298All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium5461Open in IMG/M
3300027643|Ga0209076_1053098All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1148Open in IMG/M
3300027873|Ga0209814_10040743All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1931Open in IMG/M
3300027874|Ga0209465_10504186All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium604Open in IMG/M
3300027880|Ga0209481_10233467All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium924Open in IMG/M
3300031716|Ga0310813_10527316All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1035Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil38.06%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil14.93%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil14.93%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil6.72%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil5.97%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere5.97%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil4.48%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil4.48%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.49%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.49%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.75%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.75%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cmEnvironmentalOpen in IMG/M
3300002561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cmEnvironmentalOpen in IMG/M
3300002562Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300002908Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300003203Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2Host-AssociatedOpen in IMG/M
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005566Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300017654Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300017657Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015EnvironmentalOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300020170Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020199Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300024330Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026296Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026310Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026316Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)EnvironmentalOpen in IMG/M
3300026318Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)EnvironmentalOpen in IMG/M
3300026324Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)EnvironmentalOpen in IMG/M
3300026330Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)EnvironmentalOpen in IMG/M
3300026331Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)EnvironmentalOpen in IMG/M
3300026332Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)EnvironmentalOpen in IMG/M
3300026342Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)EnvironmentalOpen in IMG/M
3300026529Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)EnvironmentalOpen in IMG/M
3300026530Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)EnvironmentalOpen in IMG/M
3300026532Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)EnvironmentalOpen in IMG/M
3300026537Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)EnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300026542Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)EnvironmentalOpen in IMG/M
3300026547Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)EnvironmentalOpen in IMG/M
3300026548Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300027643Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027874Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027880Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)Host-AssociatedOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25383J37093_1002123523300002560Grasslands SoilVTRAAVLLLLAATLAGCATAPPSVGSLAGEWHGRISTPRGHTAARLTLAPDGRYEGAAFFDGGDRPLHGAIVALPDGRLRYVGSEGDGKVRVDDGALRFRGDDGATGGVFRRRIGP*
JGI25384J37096_1007370743300002561Grasslands SoilAATLAGCATAPPSVGSLAGEWHGRISTPRGHTAARLTLAPDGRYEGAAFFDGGDRPLHGAIVALPDGRLRYVGSEGDGKVRVDDGALRFRGDDGATGGVFRRRIGP*
JGI25384J37096_1007589313300002561Grasslands SoilMRRAAALWLLVAPLAGCATTPPSVGSLAGEWHGRVSTPRGHTTARLTIAPDGRYEGTAYFDGLDRPLHGAIVALPSGLLRYVGSEGDGTVTVDDGTLRLRGDDGATGARFTRQP*
JGI25382J37095_1002422423300002562Grasslands SoilMRRAAAVWLLVAPLAGCATTPPSVGSLAGEWHGRVSTPRGHTTARLTIAPDGRYEGTAYFDGLDRPLHGAIVALPSGLLRYVGSEGDGTVTVDDGTLRLRGDDGATGARFTRQP*
JGI25382J43887_1000740373300002908Grasslands SoilMRRAAAXWLLVAPLAGCATTPPSVGSLAGEWHGRVSTPRGHTTARLTIAPDGRYEGTAYFDGLDRPLHGAIVALPSGLLRYVGSEGDGTVTVDDGTLRLRGDDGATGARFTRQP*
JGI25382J43887_1006275313300002908Grasslands SoilVTRAAVLLLLAATLAGCATAPPSVGSLAGEWHGRISTPRGHTXARLTLAPDGRYEGAAFFDGGDRPLHGAIVALPDGRLRYVGSEGDGKVRVDDGALRFRGDDGATGGVFRRRIGP*
JGI25406J46586_1001190353300003203Tabebuia Heterophylla RhizosphereMRLGVLLLVSAMLAACARPSPGVGTLAGDWQGRIVTARGHTAARLTVGADGRYTGTAFFDGDDRPLHGAIVALPDGRLCYLGSEGDGDVTVNGDALRLRGDDGATGGLFTRRP*
Ga0066395_1099099123300004633Tropical Forest SoilMRAAVAAGLLAATLTGCTAHTTPSVESLAGDWFGRVSTSRGHTSARLTIAEDGRYEGTAYFDDGDEPLHGTIMALPSGRLRYVSSDGDGVVGLDNGTLWLRGDGGATAGSFRRRP*
Ga0066674_1000312973300005166SoilVTRAAVLLLLAATLAGCATAPPSVGSLAGEWHGRISTPRGHTGARLTLAPDGRYEGAAFFDGGDRPLHGAIVALPDGRLRYVGSEGDGKVRGDDGATGGVFRRRIGP*
Ga0066672_1012459013300005167SoilMRGLLLLVATLAGCATTPPSVGSLAGEWHGRVSTPRGHTTARLTIAPDGRYEGTAYFDGLDRPLHGAIITLPSGLLRYVSSEGDGTVTVDDRMLRLRGDDGATGARFTRQP*
Ga0066677_1000510423300005171SoilMRLAPKVLLGVALAGCAPTSPHVGSLAGEWQGRIATARGHTAARLTVTPDGRFEGTAFFAGTDRPLHGAIVALPDGRLRYIGSEGDGAVSVKGEALRLRGDDGATGGVFRRATGP*
Ga0066677_1010938513300005171SoilMRRAATAVLLAAALGACARTAPSVGSLAGEWQGRVSTPRGHTAARLTVAPDGRYEGTAFFDGEDRAVHGAIVALPDGRLRYVGSEGDGAVSVDDGTLRLRGDDGGTGGVFRRTI
Ga0066680_1090134313300005174SoilMRGLLLLVATLAGCATTPPSVGSLAGEWHGRVSTPRGHTTARLTIAPDGRYEGTAYFDGLDRPLHGAIVTLPSGLLRYVSSEGDGTVTVDDGMLRLRGDDGATGARFTRQP*
Ga0066673_1037119323300005175SoilMRLAPKVLLGVALAGCAPTSPHVGSLAGEWQGRIATARGHTAARLTVTPDGRFEGTAFFAGTDRPLHGAIVALPDGRLRYIGSEGDGAVSVKGEALSLRGDDGATGGVFRRATGP*
Ga0066679_1005527533300005176SoilMRRAGGLLLVATLAGCATTPPTVGSLAGEWHGRVSTPRGHTTARLTIAPDGRYEGTAYLDGLDRPLHGAIVTLPSGLLRYVSSEGDGTVTVDEGMLRLRGDDGATGARFTRQP*
Ga0066688_1024166443300005178SoilVGSLAGEWHGRVSTPRGHTTARLTIAPDGRYEGAAYFDGLDRPLHGAIVTLPSGLLRYVSSEGDGIVTVDGGMLRLRGDDGATGARFTRQP*
Ga0066688_1043722413300005178SoilMRLAPKVLLGVALAGCAPTSPHVGSLAGEWQGRIATARGHTAARLTVTPDGRFEGTAFFAGTDRPLHGAIVALPDGRLRYIGSEGDGAVSVKGEAL
Ga0066684_1011135013300005179SoilSVGSLAGEWHGRVSTPRGHTTARLTIAPDGRYEGTAYFDGLDRPLHGAIITLPSGLLRYVSSEGDGTVTVDDRMLRLRGDDGATGARFTRQP*
Ga0066684_1018254323300005179SoilMRRAATAVLLAAALGACARTAPSVGSLAGEWQGRVSTPRGHTAARLTVAPDGRYEGTAFFDGEDRAVHGAIVALPDGRLRYVGSEGDGAVSVDDGTLRLRGDDGGTGGVFRRTIGP*
Ga0066671_1062329523300005184SoilMRLAPAVLLGVALAGCAPTSTHLGSLTGEWQGRIATARGHTAARLTVMPDGRFEGTAFFDGTDRRLHGAIVALPDGRLRYVGSEGDGAVSVEGQALRLRGDDGATGGVFRRPL*
Ga0066676_1000762853300005186SoilVTRAAVLLLLAATLAGCATAPPSVGSLAGEWHGRISTPRGHTAARLTLAPDGRYEGAAFFDGGDRPLHGAIVALPDGRLRYVGSEGDGKVRGDDGATGGVFRRRIGP*
Ga0066676_1001618453300005186SoilMRLAAVLLLALAPAGCAPVSPNLASLAGEWQGRIVTARGHTAARLTLGADGRYAGTAFFDGDDRPLHGAIVTLPDGRLRYVGSEGDGMVTLEGEALRLRGDDGTTGGVFRRASSR*
Ga0066388_10021385933300005332Tropical Forest SoilVRRAAASVLLAATLTGCAARAAPSVEGLAGEWFGRVSTPRGHTVARLTIAPNGRYEGTAYFDGVDRPLHGAIVALPSGRLRYVSSEGDGTVDLDDDTLRLRGDDGATGAWFTRQP*
Ga0066388_10049553423300005332Tropical Forest SoilMRAAVAAGLLAATLTGCTAHTTPSVESLAGDWFGRVSTSRGHTSARLTIARDGRYEGTAYFDDGDQPLHGTIMALPSGRLRYVSGDGDGAVGLDDGTLRLRGDGGATGASFTRQP*
Ga0066388_10613789723300005332Tropical Forest SoilMTARRLVPLVLVATLAGCATPSPNLGTLAGDWRGRISTPTGHTGARLTVGPDGRYTGTAFFDGVDRPLYGAIVALPNGRLRYVGSEGDGDVAVRGDVLRLRGDDGATGGVFR
Ga0066686_1001328433300005446SoilMRLAAVLLLALAPAGCAPVSPNLASLAGEWQGRIVTARGHTAARLTLGADGRYAGTAFFDGDDRPLHGAIVTLPDGRLRYVGSEGDGMVTLEGEALRLRGDDGTTGGVFRRGSP*
Ga0066682_1015314113300005450SoilMRLAPKVLLGVALAGCAPTSPHVGSLAGEWQGRIATARGHTAARLTVTPDGRFEGTAFFAGTDRPLHGAIVALPDGRLRYIGSEGEGAVSVKGEALRLRGDDGATGGVFRRATGP*
Ga0066681_1006050733300005451SoilMRRAATAVLLAATLGACARTAPSVGSLAGEWQGRVSTPRGHTAARLTVAPDGRYEGTAFFDGGDRALHGAIVALPDGRLRYVGSEGDGAVSVDDGKLRLRGDDGGTGGVFRRTIGP*
Ga0066681_1011659833300005451SoilMRGLLLLVATLAGCATTPPSVGSLAGEWHGRVSTPRGHTTARLTIAPDGRYEGAAYFDGLDRPLHGAIITLPSGLLRYVSSEGDGTVTVDDRMLRLRGDDGATGARFTRQP*
Ga0070706_10091897323300005467Corn, Switchgrass And Miscanthus RhizosphereMKRLATLIALVALGGCAAAMAPDVRSLAGDWHGRISTPRGHTTARMTVVADGRYEGTAFFDGVDRPLHGAIVALPDGRLRYVGTEGDGTVTVQGNALRLRGDDGTTGGVFRRMGAD*
Ga0066701_1019625513300005552SoilMRRAGGLLLLVATLAGCATTPPSVGSLAGEWHGRVSTPRGHTTARLTIAPDGRYEGSAYFDGWDRPLHGAIVTLPSGLLRYVSSEGDGTVTVDDRMLRLRGDDGATGARFTRQP*
Ga0066695_1055040023300005553SoilASAVMHLAPKVLLGVALAGCAPTSPHVGSLAGEWQGRIATARGHTAARLTVTPDGRFEGTAFFAGTDRLLHGAIVALPDGRLRYIGSEGDGAVSVKGEALRLRGDDGATGGVFRRATGP*
Ga0066661_1013888723300005554SoilMRGLLLLVATLAGCATTPPSVGSLAGEWHGRVSTPRGHTTARLTIAPDGRYEGTAYFDGLDRPLHGAIVTLPSGLLRYVSSEGDGIVTVDGGMLRLRGDDGATGARFTRQP*
Ga0066692_1048007123300005555SoilMRRVGGLLLVATLAGCATTPPSVGSLAGEWHGRVSTPRGHTTARLTIAPDGRYEGTAYFDGLDRPLHGAIITLPSGLLRYVSSEGDGTVTVDDRMLRLRGDDGATGARFTRQP*
Ga0066704_1001139363300005557SoilMRGLLLLVATLAGCATTPPSVGSLAGEWHGRVSTPRGHTTARLTIAPDGRYEGTAYFDGLDRPLHGAIVTLPSGLLRYVSSEGDGTVTVDDRMLRLRGDDGATGARFTRQP*
Ga0066670_1007115923300005560SoilMRGLLLLVATLAGCATTPPSVGSLAGEWHGRVSTPRGHTTARLTIAPDGRYGGTAYFDGLDRPLHGAIVTLPSGLLRYVSSEGDGTVTVDDGMLRLRGDDGATGARFTRQP*
Ga0066699_1028400333300005561SoilGKAASAVMRVAPAVLLGVALAGCAPTSTNVGSLAGEWQGRIATARGHTAARLTVTPDGRFEGTAFFAGTDRPLHGAIVALPDGRLRYIGSEGDGAVSVKGEALSLRGDDGATGGVFRRATGP*
Ga0066693_1003759533300005566SoilMRRAATAVLLAATLGACARTAPSVGSLAGEWQGRVSTPRGHTAARLTVAPDGRYEGTAFFDGGDRAVHGAIVALPDGRLRYVGSEGDGAVSVDDGTLRLRGDDGGTGGVFRRTIGP*
Ga0066693_1010952923300005566SoilMRVAPAVLLGVALAGCAPTSTNVGSLVGEWQGRIATARGHTAARLTVTPDGRFEGTAFFAGTDRPLHGAIVALPDGRLRYIGSEGDGAVSVKGEALSLRGDDGATGGVFRRATGP*
Ga0066703_1036226413300005568SoilVTRAAVLLLLAATLAGCATAPPSVGSLAGEWHGRISTPRGHTAARLTLAPDGRYEGAAFFDGGDRPLHGAIVALPDGRLRYVGSEGDGTVRVDDGALSFRGDDGATGSVFRRRI
Ga0066702_1033678523300005575SoilMRVAPAVLLGVALAGCAPTSTNVGSLAGEWQGRIATARGHTAARLTVTPDGRFEGTAFFAGTDRPLHGAIVALPDGRLRYIGSEGDGAVSVKGEALSLRGDDGATGGVFRRATGP*
Ga0066708_1027087723300005576SoilMRRAATAVLLAAALGACARTAPSVGSLAGEWQGRVSTPRGHTAARLTVAPDGRYEGTAFFDGGDRALHGAIVALPDGRLRYVGSEGDGAVSVDDGKLRLRGDDGGTGGVFRRTIGP*
Ga0066706_1092046523300005598SoilRVAPARGPRRRPGPMRRAATAVLLAATLGACARTAPSVGSLAGEWQGRVSTPRGHTAARLTVAPDGRYEGTAFFDGGDRAVHGAIVALPDGRLRYVGSEGDGAVSVDDGTLRLRGDDGGTGGVFRRTIGP*
Ga0066905_10006250423300005713Tropical Forest SoilMRAAAACVLVAVTLAGCTAHTTPGVQSLAGDWFGRVSTSRGHTSARVTIAPDGRYDGTAYFDGVDQPLRGRIIALPSGRLRYVSSEGDGAVRLDEGTLRLRSDDGVSAASFTRQP*
Ga0066905_10101633323300005713Tropical Forest SoilATLAGCVTPSPNLGTIAGDWRGRISTPTGHTGARLTVGTDGRYTGTAFFDGVDRPLYGAIVALPNGRLRYVGSEGDGDVTVRGDALRLRGDDGATGGVFRRP*
Ga0066903_10153640043300005764Tropical Forest SoilMRAAAAAGLLAATLTGCTAHTTPSVESLAGDWFGRVSTSRGHTSARLTIAEDGRYEGTAYFDDGDEPLHGTIMALPSGRLRYVSSDGDGVVGLDNGTLWLRGDGGATAGSFRRRP*
Ga0066651_1011317123300006031SoilMHLAPKVLLGVALAGCAPTSPHVGSLAGEWQGRIATARGHTAARLTVTPDGRFEGTAFFAGTDRPLHGAIVALPDGRLRYIGSEGDGAVSVKGEALSLRGDDGATGGVFRRATGP*
Ga0066656_1016925733300006034SoilMRLAAVLLLALAPAGCAPVSPNLASLAGEWQGRIVTARGHTAARLTLGADGRYAGTAFFDGDDRPLHGAIVTLPDGRLRYVGSEGDGMVTLEGEALRLRGDDG
Ga0066652_10041776713300006046SoilALATAGDARRPRRCRRSGAGEAASAVMRLAPKVLLGVALAGCAPTSPHVGSLAGEWQGRIATARGHTAARLTVTPDGRFEGTAFFAGTDRPLHGAIVALPDGRLRYIGSEGDGAVSVKGEALRLRGDDGATGGVFRRATGP*
Ga0075417_1001940943300006049Populus RhizosphereLTRVAAVFLIGAVSAGCASVAPPDVASLAGEWQGRVVTARGHTAARLTVAADGRYEGTAFFDGAERPLHGALMKLSDGRLRYVGNEGDGTVTLEGERLRLRGNDGATGGVFLRARP*
Ga0066653_1000548823300006791SoilVTRAAVLLLLAATLAGCATAPPSVGRLAGEWHGRISTPRGHTAARLTLAPDGRYEGAAFFDGGDRPLHGAIVALPDGRLRYVGSEGDGKVRGDDGATGGVFRRRIGP*
Ga0066665_1027144943300006796SoilMRGLLLLVATLAGCATTLPSVGSVAGEWHGRVSTPRGHTTARLTIAPDGRYEGAAYFDGLDRPLHGAIVTLPSGLLRYVSSEGDGTVTVDDGMLRLRGDDGATGARFTRQP*
Ga0075428_10007192973300006844Populus RhizosphereLIRLAAVLLLGVVSAGCASIAPPDVALLAGEWQGRIVTARGHTAARLTVGADGRYEGTAFFDGAERPLHGALMKLSDGRLRYVGNEGDGTVTLEGERLRLRGDDGATGGVFHRARP*
Ga0075430_10010364423300006846Populus RhizosphereLTRVAAVFLIGAVSAGCASVAPPDVASLAGEWQGRVVTARGHTAARLTVAADGRYEGTAFFDGAERPLHGALMKLSDGRLRYVGNEGDGTVTLEGERLRLRGDDGATGGVFHRAHP*
Ga0075429_10002771723300006880Populus RhizosphereLTRVAAVFLIGAVSAGCASVAPPDVASLAGEWQGRVVTARGHTAARLTVAADGRYEGTAFFDGAERPLHGALMKLSDGRLRYVGNEGDGTVTLEGERLRLRGDDGATGGVFHRARP*
Ga0075429_10020811243300006880Populus RhizosphereVTGMRAGVLLLVAATLAGCARLSPSVDTLAGDWLGRIATARGHTAARLTVGADGRYVGTAFFDGDDRPLHGAIVALPDGRLRYVGSEGDGDVTVNGDALRLRGDDGATGGLFTRRP*
Ga0099791_1000470813300007255Vadose Zone SoilMRRAGGLLLLVATLAGCATTPPSVGSLAGEWHGRVSTPRGHTTARLTIAPDGRYEGTAYFDGLDRPLHGAIVTLPSGLLRYVSSEGDGTVTVDDGMLRLRGDDGATGARFTRQP*
Ga0099794_1020834423300007265Vadose Zone SoilVTRAALLLLLAATLAGCATAPPSVGGLAGEWHGRISTPRGHTAARLTLAPDGRYEGTAFFDGGDRPLHGAIVALPDGRLRYVGSEGDGTVRLDDGALSFRGDDGATGGVFRRRIGP*
Ga0099794_1029086113300007265Vadose Zone SoilTLAGCATTPPSVGSLAGEWHGRVSTPRGHTTARLTIAPDGRYEGTAYFDGLDRPLHGAIVTLPSGLLRYVSSEGDGTVTVDDGMLRLRGDDGATGARFTRQP*
Ga0066710_10166898813300009012Grasslands SoilMRGLLLLVATLAGCATTPPSVGSLAGEWHGRVSTPRGHTTARLTIAPDGRYEGTAYLDGLDRPLHGAIVTLPSGLLRYVSSEGDGTVTVDDRMLRL
Ga0066710_10356706723300009012Grasslands SoilMRRAATAVLLAAALGACARTAPSVGSLAGEWQGRVSTPRGHTAARPTVAPDGRYEGTAFFDGGDRALHGAIVALPDGRLRYVGSEGDGAVSVDDGTLSLRGDDGGTGGVFRRTIGP
Ga0066709_10143550213300009137Grasslands SoilMRRAATAVLLAAALGACARTAPSVGSLAGEWQGRVSTPRGHTAARLTVAPDGRYEGTGFFDGGDRAVHGAIVAVPDGRLRYVGREGDGAVSVDDGMLRLRGDDGGTAGVFRRTIGP*
Ga0114129_1007207563300009147Populus RhizosphereMRAGVLLLVAATLAGCARLSPSVDTLAGDWLGRIATARGHTAARLTVGADGRYVGTAFFDGDDRPLHGAIVALPDGRLRYVGSEGDGDVTVNGDALRLRGDDGATGGLFTRRP*
Ga0126374_1045441113300009792Tropical Forest SoilMRAAAAAGLLAATLTGCTAHTTPSVESLAGDWFGRVSTSRGHTSARLTIARDGRYEGTAYFDDGDEPLHGTIMALPSGRLRYVSSDGDGVVGLEIRTTRAQDLREV
Ga0126384_1001524843300010046Tropical Forest SoilMTPRRLVPLVVVATLAGCATPSPNLGTLAGDWHGRISTPSGHTAARLTVGADGRYTGTAFFDGGVDRPLYGAIVVLPNGRLRYLGSEGDGDVSVRGDALRLRGDDGATGGVFRRP*
Ga0126376_1194716123300010359Tropical Forest SoilMTPRRLVPLVVVATLAGCATPAPNLGTLAGDWQGRISTPSGHTAARLTVGADGRYTGTAFFDGGVDRPLYGAIVVLPNGRLRYLGSEGDGDVSVRGDALRLRGDDGATGGVFRRP*
Ga0126372_1043126923300010360Tropical Forest SoilMRRAAASVLLAATLTGCAPRTAPRVEGLAGEWFGRVSTPRGHTVARLTIGPDGRYDGTAYFDGVDRPLHGAIIVLPSGRLRYVSSEGDGTVELDNDTLHLRGDDGATGASFTRQP*
Ga0126378_1116798313300010361Tropical Forest SoilMRRAAASVLLAATLTGCAPRTALRVEGLAGEWFGRVSTPRGHTVARLTIGSDGRYDGTAYFDGVDRPLHGAIIALPSGRLRYVSSEGDGTVELDDDTLHLRGDDGATGASFTRQP*
Ga0126379_1337792123300010366Tropical Forest SoilMRRAAASVLLAATLTGCAPRTAPRVEGLAGEWFGRVSTPRGHTVARLTIGSDGRYDGTAYFDGVDRPLHGAIIALPSGRLRYVSSEGDGTVELDDDTLHLRGDDGATGASPFNRLLKGGCDAQ
Ga0126379_1383006823300010366Tropical Forest SoilGGAAMRAAAAAGLLAATLTGCTAHTTPSVESLAGDWFGRVSTSRGHTSARLTIAEDGRYEGTAYFDDGDEPLHGTIMALPSGRLRYVSSDGDGVVGLDNGTLWLRGDGGATAGSFRRRP*
Ga0126383_1356350723300010398Tropical Forest SoilATPAPNLGTLAGDWQGRISTPSGHTAARLTVGADGRYTGTAFFDGGVDRPLYGAIVVLPNGRLRYLGSEGDGDVSVRGDALRLRGDDGATGGVFRRP*
Ga0137380_1000321583300012206Vadose Zone SoilVTRAAVLLLLAATLAGCATAPPSVGSLAGEWHGRISTPRGHTGARLTLAPDGRYEGAAFFDGGDRPLHGAIVALPDGRLRYVGSEGDGKVRVDDGALRFRGDDGATGGVFRRRIGP*
Ga0137381_1002801183300012207Vadose Zone SoilVTRAAVLLLLAATLAGCATAPPSVGSLAGEWHGRISTPRGHTAARLTLAPDGRYEGAAFFDGGDRPLHGAIVALPDGRLRYVGSERDGKVRVDDGALRFRGDDGATGGVFRRRIGP*
Ga0137376_1048161443300012208Vadose Zone SoilDVRALAGDWQGRIVTARGHTAARLTVGLDGRYEGTAFFDGADRPLHGAIVALPDGRLRYVGSEGDGSVALEGEALRLRGDDGATGGMFRRRIAP*
Ga0137396_1002154743300012918Vadose Zone SoilMTRAAGLVLLAATLAGCATTPPSVGSLAGEWQGRVSTPRGQTAARLTVTSDGRSEGTAHFDGVDRPLHGAIVTLPDGRLRYVSSEGDGSVSTADGALRLRGDDGASGGVFRRRIGP*
Ga0137396_1014783723300012918Vadose Zone SoilMRRAGGLLLLVATLAGCATTPPSVGSLAGEWHGRVSTARGHTTARLTIAPDGRYEGTAYFDGLDRPLHGAIVTLPSGLLRYVSSEGDGTVTVDDGMLRLRGDDGATGARFTRQP*
Ga0137394_1053739223300012922Vadose Zone SoilVTRAAVLLLLAGTLAGCAIAPPSVGSLAGDWHGRISTPRGHTAARLTLAPDGRYEGAAFFDGGDRPLHGAIVALPDGRLRYVGSEGDGDVRVDEGALRFRGDDGATGGVFRRRIGP*
Ga0137359_1116477113300012923Vadose Zone SoilMRRAGGLLLLVATLAGCATTPPSVGSLAGEWHGRVSTPRGHTTARLTIAPDGRYEGTAYFDGLDRPLHGAIVTLPSGLLRYVGSEGDGTVTVDDGMLRLRGDDGATGARFTRQP*
Ga0137404_1002588143300012929Vadose Zone SoilMTRAAALVLLAATLAACATPMVPSVGSLAGEWQGRVSTPRGQTAARLTIAPDGRYEGTAYFDGVDRPLHGAIVALPSGRLRYVSSEGDGTVSVDDGTLRLRGDDGATGAHFTRQH*
Ga0137404_1007595313300012929Vadose Zone SoilVTRAAVLLLLAATLAGCATASPSVGSLAGEWHGRISTPRGHTAARLTLAPDGRYEGAAFFDGGDRPLHGAIVALPDGRLRYVGSEGDGKVRVDDGALRFRGDDGATG
Ga0137404_1047136343300012929Vadose Zone SoilGSLAGEWHGRVSTPRGHTTARLTIAPDGRYEGTAYFDGLDRPLHGAIITLPSGLLRYVSSEGDGTVTVDDRMLRLRGDDGATGARFTRQP*
Ga0137404_1067508613300012929Vadose Zone SoilMRLAAVLLLALAPAGCAPVSPNLASLAGEWQGRIVTARGHTAARLTLGADGRYAGTAFFDGDDRPLHGAIVTLPDGRLRYVGSEGDGMVTLEGEALRLRGDDGATGGVFRRGSP*
Ga0126375_1135767113300012948Tropical Forest SoilMTARCLVPLVLVATLAGCVTPSPNLGTIAGDWRGRISTPTGHTGARLTVGPDGRYTGTAFFDGVDRPLYGAIVALPNGRLRYVGSEGDGDVTVRGDALRLRGDDGATGGVFRRP*
Ga0137409_1094175023300015245Vadose Zone SoilVTRAAVLLLLAGTLAGCAIAPPSVGSLAGDWHGRISTQRGHTAARLTLAPDGRYEGAAFFDGGDRPLHGAIVALPDGRLRYVGSEGDGDVRVDEGALRFRGDDGATGGVFRRRIGP*
Ga0134085_1000548843300015359Grasslands SoilVTRAAVLLLLAATLAGCATAPPSVGSLAGEWHGRISTPRGHTGARLTLAPDGRYEGAAFFDGGDRPLHGAIVALPDGRLRYVGSEGDGKVRGGDGATGGVFRRRIGP*
Ga0132258_1012910973300015371Arabidopsis RhizosphereMLAGCSATTADIGTLGGDWHGRVVTADGATVARLTIAPDGRYAGMAYFEGVDRPLRGAIVALPSGQLRYVGSDGDGTVSVRDGELRLRGDNGGTSGVFRRTVNP*
Ga0132257_10141215013300015373Arabidopsis RhizosphereAGCSATTADIGTLGGDWHGRVVTADGATVARLTIAPDGRYAGMAYFEGVDRPLRGAIVALPSGQLRYVGSDGDGTVSVRDGELRLRGDNGGTSGVFRRTVNP*
Ga0134069_100073593300017654Grasslands SoilVTRAAVLLLLAATLAGCATAPPSVGSLAGEWHGRISTPRGHTAARLTLAPDGRYEGAAFFDGGDRPLHGAIVALPDGRLRYVGSEGDGKVRGGDGATGGVFRRRIGP
Ga0134074_101048043300017657Grasslands SoilVTRAAVLLLLAATLAGCATAPPSVGSLAGEWHGRISTPRGHTAARLTLAPDGRYEGAAFFDGGDRPMHGAIVALPDGRLRYVGSEGDGKVRGGDGATGGVFRRRIGP
Ga0134074_115140913300017657Grasslands SoilGCATAPPSVGSLAGEWHGRISTPRGHTGARLTLAPDGRYEGAAFFDGGDRPLHGAIVALPDGRLRYVGSEGDGKVRGDDGATGGVFRRRIGP
Ga0134074_136993223300017657Grasslands SoilMRLAPKVLLGVALAGCAPTSPHVGSLAGEWQGRIATARGHTAARLTVTPDGRFEGTAFFAGTDRPLHGAIVALPDGRLRYIGSEGDGAVSVKGEALRLRGDDGATGG
Ga0134083_1002574233300017659Grasslands SoilVTRAAVLLLLAATLAGCATAPPSVGSLAGEWHGRISTPRGHTAARLTLAPDGRYEGAAFFDGGDRPLHGAIVALPDGRLRYVGSERDGKVRGDDGATGGVFRRRIGP
Ga0066655_1000292373300018431Grasslands SoilVTRAAVLLLLAATLAGCATAPPSVGSLAGEWHGRISTPRGHTGARLTLAPDGRYEGAAFFDGGDRPLHGAIVALPDGRLRYVGSEGDGKVRGDDGATGGVFRRRIGP
Ga0066655_1141129013300018431Grasslands SoilSAVMRFAPKVLLGVALAGCAPTSPHGGSLAGEWQGRIATARGHTAARLTVTPDGRFEGTAFFAGTDRPLHGAIVALPDGRLRYIGSEGDGAVSVKGEALRLRGDDGATGGVFRRATGP
Ga0066667_1004784643300018433Grasslands SoilMRGLLLLVATLAGCATTPPSVGSLAGEWHGRVSTPRGHTTARLTIAPDGRYEGAAYFDGLDRPLHGAIVTLPSGLLRYVSSEGDGTVTVDDGMLRLRGDDGATGARFTRQP
Ga0066667_1022881323300018433Grasslands SoilMRLAPKVLLGVALAGCAPTSPHVGSLAGEWQGRIATARGHTAARLTVTPDGRFEGTAFFAGTDRPLHGAIVALPDGRLRYIGSEGEGAVSVKGEALRLRGDDGATGGVFRRATGP
Ga0066667_1169367023300018433Grasslands SoilMRRAATAVLLAATLGACARTAPSVGSLAGEWQGRVSTPRGHTAARLTVAPDGRYEGTAFFDGGDRALHGAIVALPDGRLRYVGSEGDGAVSVDDGTLRLRGDDGGTGGVFRRTIGP
Ga0066662_1008823123300018468Grasslands SoilVTRAAVLLLLAATLAGCATAPPSVGSLAGEWHGRISTPRGHTGARLTLAPDGRYEGAAFFDGGDRPLHGAIVALPDGRLRYVGSEGDGSVSLDDGALRLRGDGGATGGVFRRRIGP
Ga0066669_1000880763300018482Grasslands SoilMRGLLLLVATLAGCATTPPTVGSLAGEWHGRVSTPRGHTTARLTIAPDGRYEGTAYFDGLDRPLHGAIITLPSGLLRYVSSEGDGTVTVDDRMLRLRGDDGATGARFTRQP
Ga0066669_1008199123300018482Grasslands SoilMRRAATAVLLAAMLGACARTAPSVGSLAGEWQGRVSTPRGHTAARLTVAPDGRYEGTAFFDGGDRAVHGAIVALPDGRLRYVGSEGDGAVSVDGGTLRLRGDDGGTGGVFRRTIGP
Ga0137408_116607233300019789Vadose Zone SoilMTRAAALVLLAATLAACATPMVPSVGSLAGEWQGRVSTPRGQTAARLTIAPDGRYEGTAYFDGVDRPLHGAIVALPSGRLRYVSSEGDGTVSVDDGTLRLRGDDGATGAHFTRQH
Ga0179594_1002106423300020170Vadose Zone SoilMRLAAVLLLALAPAGCARVSPNLASLAGEWQGRIVTARGHTAARLTLGADGRYAGTAFFDGDDRPLHGAIVTLPDGRLRYVGSEGDGMVTLEGEALRLRGDDGATGGVFRRGSP
Ga0179592_1046377123300020199Vadose Zone SoilMRRAGGLLLLVATLAGCATTPPSVGSLAGEWHGRVSTPRGHTTARLTIAPDGRYEGTAYFDGLDRPLHGAIVTLPSGLLRYVSSEGDGTVTVDDGMLRLRGDDGATGARFTRQP
Ga0137417_134761543300024330Vadose Zone SoilMRRAGALLLLVATLAGCATTPPSVGSLAGEWHGRVSTPRGHTTARLTIAPDGRYEGTAYFDGLDRPLHGAIVTLPSGLLRYVSSEGDGTVTVDDGMLRLRGDDGATGARFTRQP
Ga0207684_1071608923300025910Corn, Switchgrass And Miscanthus RhizosphereMKRLATLIALVALGGCAAAMAPDVRSLAGDWHGRISTPRGHTTARMTVVADGRYEGTAFFDGVDRPLHGAIVALPDGRLRYVGTEGDGTVTVQGNALRLRGDDGTTGGVFRRMGAD
Ga0209235_1001410153300026296Grasslands SoilVTRAAVLLLLAATLAGCATAPPSVGSLAGEWHGRISTPRGHTAARLTLAPDGRYEGAAFFDGGDRPLHGAIVALPDGRLRYVGSEGDGKVRVDDGALRFRGDDGATGGVFRRRIGP
Ga0209235_103706523300026296Grasslands SoilMRRAAALWLLVAPLAGCATTPPSVGSLAGEWHGRVSTPRGHTTARLTIAPDGRYEGTAYFDGLDRPLHGAIVALPSGLLRYVGSEGDGTVTVDDGTLRLRGDDGATGARFTRQP
Ga0209239_107896843300026310Grasslands SoilVTRAAVLLLLAATLAGCATAPPSVGSLAGEWHGRISTPRGHTAARLTLAPDGRYEGAAFFDGGDRPLHGAIVALPDGRLRYVGSEGDGKVRGDDGATGGVFRRRIGP
Ga0209155_103464953300026316SoilMRGLLLLVATLAGCATTPPSVGSLAGEWHGRVSTPRGHTTARLTIAPDGRYEGTAYFDGLDRPLHGAIITLPSGLLRYVSSEGDGTVTVDDRMLRLRGDDGATGARFTRQP
Ga0209155_104961933300026316SoilMRLAPKVLLGVALAGCAPTSPHVGSLAGEWQGRIATARGHTAARLTVTPDGRFEGIAFFAGTDRPLHGAIVALPDGRLRYIGSEGDGAVSVKGEALRLRGDDGATGGVFRRATGP
Ga0209155_111518323300026316SoilMRRAATAVLLAATLGACARTAPSVGSLAGEWQGRVSTPRGHTAARLTVAPDGRYEGTAFFDGGDRAVHGAIVALPDGRLRYVGSGGDGAVSVDDGKLRLRGDDGGTGGVFRRTIGP
Ga0209471_101373243300026318SoilMRGLLLLVATLAGCATTPPSVGSLAGEWHGRVSTPRGHTTARLTIAPDGRYEGTAYFDGLDRPLHGAIVTLPSGLLRYVSSEGDGTVTVDDGMLRLRGDDGATGARFTRQP
Ga0209471_116123633300026318SoilATLAGCATTPPTVGSLAGEWHGRVSTPRGHTTARLTIAPDGRYEGTAYLDGLDRPLHGAIVTLPSGLLRYVSSEGDGTVTVDEGMLRLRGDDGATGARFTRQP
Ga0209470_101855433300026324SoilMRLAAVLLLALAPAGCAPVSPNLASLAGEWQGRIVTARGHTAARLTLGADGRYAGTAFFDGDDRPLHGAIVTLPDGRLRYVGSEGDGMVTLEGEALRLRGDDGTTGGVFRRASSR
Ga0209473_109589113300026330SoilPPSVGSLAGEWHGRVSTPRGHTTARLTIAPDGRYEGTAYFDGLDRPLHGAIITLPSGLLRYVSSEGDGTVTVDDRMLRLRGDDGATGARFTRQP
Ga0209267_126654423300026331SoilLVATLAGCATTLPSVGSVAGEWHGRVSTPRGHTTARLTIAPDGRYEGAAYFDGLDRPLHGAIVTLPSGLLRYVSSEGDGIVTVDGGMLRLRGDDGATGARFTRQP
Ga0209803_100662523300026332SoilVTRAAVLLLLAATLAGCATAPPSLGSLAGEWHGRISTPRGHTAARLTLAPDGRYEGAAFFDGGDRPLHGAIVALPDGRLRYVGSEGDGKVRGDDGATGGVFRRRIGP
Ga0209057_111768743300026342SoilTPPSVGSLAGEWHGRVSTPRGHTTARLTIAPDGRYEGTAYFDGLDRPLHGAIVTLPSGLLRYVSSEGDGTVTVDDGMLRLRGDDGATGARFTRQP
Ga0209806_105158433300026529SoilMRRAGGLLLVATLAGCATTPPTVGSLAGEWHGRVSTPRGHTTARLTIAPDGRYEGTAYFDGLDRPLHGAIITLPSGLLRYVSSEGDGTVTVDDGMLRLRGDDGATGARFTRQP
Ga0209807_122312023300026530SoilMRLAPKVLLGVALAGCAPTSPHVGSLAGEWQGRIATARGHTAARLTVTPDGRFEGTAFFAGTDRPLHGAIVALPDGRLRYVGSEGDGKVRGDDGATGGVFRRRIGP
Ga0209807_122721213300026530SoilPGPMRRAATAVLLAATLGACARTAPSVGSLAGEWQGRVSTPRGHTAARLTVAPDGRYEGTAFFDGGDRAVHGAIVALPDGRLRYVGSEGDGAVSVDGGTLRLRGDDGGTGGVFRRTIGP
Ga0209160_105577733300026532SoilMRGLLLLVATLAGCATTPPSVGSLAGEWHGRVSTPRGHTTARLTIAPDGRYEGTAYFDGLDRPLHGAIVTLPSGLLRYVSSEGDGTVTVDDRMLRLRGDDGATGARFTRQP
Ga0209157_102536433300026537SoilMRLAAVLLLALAPAGCAPVSPNLASLAGEWQGRIVTARGHTAARLTLGADGRYAGTAFFDGDDRPLHGAIVTLPDGRLRYVGSEGDGMVTLEGEALRLRGDDGTTGGVFRRGSP
Ga0209056_1002229723300026538SoilMRGLLLLVATLAGCATTPPSVGSLAGEWHGRVSTPRGHTTARLTIAPDGRYEGTAYFDGLGRPLHGAIVTLPSGLLRYVSSEGDGTVTVDDGMLRLRGDDGATGARFTRQP
Ga0209805_111429423300026542SoilMRRAATAVLLAAALGACARTAPSVGSLAGEWQGRVSTPRGHTAARLTVAPDGRYEGTAFFDGEDRAVHGAIVALPDGRLRYVGSEGDGAVSVDDGTLRLRGDDGGTGGVFRRTIGP
Ga0209805_117993613300026542SoilGKAASAVMRVAPAVLLGVALAGCAPTSTNVGSLAGEWQGRIATARGHTAARLTVTPDGRFEGIAFFAGTDRPLHGAIVALPDGRLRYIGSEGDGAVSVKGEALSLRGDDGATGGVFRRATGP
Ga0209156_1014779113300026547SoilMRLAPKVLLGVALAGCAPTSPHVGSLAGEWQGRIATARGHTAARLTVTPDGRFEGTAFFAGTDRPLHGAIVALPDGRLRYIGSEGDGAVSVKGEALRLRGDDGATGGVFRRAT
Ga0209161_1035837823300026548SoilRGPRRRPGPMRRAATAVLLAATLGACARTAPSVGSLAGEWQGRVSTPRGHTAARLTVAPDGRYEGTAFFDGGDRAVHGAIVALPDGRLRYVGSEGDGAVSVDDGTLRLRGDDGGTGGVFRRTIGP
Ga0209474_1001829813300026550SoilMRLAPKVLLGVALAGCAPTSPHVGSLAGEWQGRIATARGHTAARLTVTPDGRFEGTAFFAGTDRPLHGAIVALPDGRLRYIGSEGDGAVSVKGEALSLRGDDGATGGVFRRATGP
Ga0209076_105309823300027643Vadose Zone SoilMRRAGGLLLLVATLAGCATTPPSVGSLAGEWHGRVSTARGHTTARLTIAPDGRYEGTAYFDGLDRPLHGAIVTLPSGLLRYVSSEGDGTVTVDDGMLRLRGDDGATGARFTRQP
Ga0209814_1004074323300027873Populus RhizosphereLTRVAAVFLIGAVSAGCASVAPPDVASLAGEWQGRVVTARGHTAARLTVAADGRYEGTAFFDGAERPLHGALMKLSDGRLRYVGNEGDGTVTLEGERLRLRGNDGATGGVFLRARP
Ga0209465_1050418623300027874Tropical Forest SoilMRAAVAAGLLAATLTGCTAHTTPSVESLAGDWFGRVSTSRGHTSARLTIAEDGRYEGTAYFDDGDEPLHGTIMALPSGRLRYVSSDGDGVVGLDNGTLWLRGDGGATAGSFRRRP
Ga0209481_1023346723300027880Populus RhizosphereVTGMRAGVLLLVAATLAGCARLSPSVDTLAGDWLGRIATARGHTAARLTVGADGRYVGTAFFDGDDRPLHGAIVALPDGRLRYVGSEGDGDVTVNGDALRLRGDDGATGGLFTRRP
Ga0310813_1052731623300031716SoilVRPRTSVLALITMLAGCSATTADIGTLGGEWHGRVVTADGATVARLTIAPDGRYEGMAFFEGVDRPLHGAIVALPSGQLRYVGSDGDGAVSVRDGELRLRGDNGGTSGVFRRTVNP


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.