Metagenome / Metatranscriptome Family F058846

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F058846
Family Type	Metagenome / Metatranscriptome
Number of Sequences	134
Average Sequence Length	46 residues
Representative Sequence	VTLLAALHAFSQEHERCGELDSAVDGDRVWMSCTCGAVINRCADDD
Number of Associated Samples	84
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	32.56 %
% of genes near scaffold ends (potentially truncated)	35.82 %
% of genes from short scaffolds (< 2000 bps)	85.07 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.65

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (79.851 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (26.119 % of family members)
Environment Ontology (ENVO)	Unclassified (51.493 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (61.194 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 14.86% β-sheet: 22.97% Coil/Unstructured: 62.16%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.65
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.65
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF04392	ABC_sub_bind	18.66
PF07452	CHRD	4.48
PF01068	DNA_ligase_A_M	2.99
PF07045	DUF1330	2.24
PF00496	SBP_bac_5	1.49
PF03480	DctP	1.49
PF02371	Transposase_20	1.49
PF00691	OmpA	0.75
PF00561	Abhydrolase_1	0.75
PF14534	DUF4440	0.75
PF11716	MDMPI_N	0.75
PF07721	TPR_4	0.75
PF13411	MerR_1	0.75
PF08734	GYD	0.75
PF00857	Isochorismatase	0.75
PF14247	DUF4344	0.75
PF03573	OprD	0.75
PF13416	SBP_bac_8	0.75
PF01695	IstB_IS21	0.75
PF01590	GAF	0.75
PF00144	Beta-lactamase	0.75
PF02727	Cu_amine_oxidN2	0.75
PF08450	SGL	0.75
PF04191	PEMT	0.75
PF01738	DLH	0.75
PF00571	CBS	0.75
PF13426	PAS_9	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	18.66
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	2.99
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	2.99
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	2.24
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.49
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.75
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.75
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.75
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.75
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.75
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.75
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.75
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.75
COG3733	Cu2+-containing amine oxidase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.75
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	79.85 %
Unclassified	root	N/A	20.15 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	79.85 %
Unclassified	root	N/A	20.15 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	79.85 %
Unclassified	root	N/A	20.15 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	32.09 %
Unclassified	root	N/A	20.15 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	11.94 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	6.72 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.49 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	32.09 %
Unclassified	root	N/A	20.15 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.97 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.24 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	2.24 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.24 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	1.49 %
unclassified Terrabacteria group	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group	1.49 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.49 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	32.09 %
Unclassified	root	N/A	20.15 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2.24 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.99 %
Terrabacteria group bacterium ANGP1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	1.49 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.49 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	1.49 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.49 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.75 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.75 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.75 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.75 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.15 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	10.45 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.24 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	2.24 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.49 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	1.49 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1.49 %
Terrabacteria group bacterium ANGP1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	1.49 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.75 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.75 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.75 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.75 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.15 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	9.70 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.24 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	2.24 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.49 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.49 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1.49 %
Terrabacteria group bacterium ANGP1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	1.49 %
Candidatus Rokubacteria bacterium RBG_16_73_20	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium RBG_16_73_20	0.75 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	0.75 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.75 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.75 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.75 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.15 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	9.70 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	2.24 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.49 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.49 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1.49 %
Terrabacteria group bacterium ANGP1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	1.49 %
Sphingomonas azotifigens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas azotifigens	0.75 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.75 %
Roseomonas oryzicola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas oryzicola	0.75 %
Candidatus Rokubacteria bacterium RBG_16_73_20	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium RBG_16_73_20	0.75 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.75 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.75 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459017\|G14TP7Y02GFO7O	Not Available	693	Open in IMG/M
3300000559\|F14TC_100579877	Not Available	1192	Open in IMG/M
3300000955\|JGI1027J12803_100555662	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300004268\|Ga0066398_10221142	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	508	Open in IMG/M
3300004633\|Ga0066395_10290680	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	890	Open in IMG/M
3300005332\|Ga0066388_100003571	All Organisms → cellular organisms → Bacteria	10141	Open in IMG/M
3300005332\|Ga0066388_100780088	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1551	Open in IMG/M
3300005332\|Ga0066388_102298790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	975	Open in IMG/M
3300005332\|Ga0066388_104989645	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300005332\|Ga0066388_105263158	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300005332\|Ga0066388_106880847	Not Available	572	Open in IMG/M
3300005363\|Ga0008090_15531771	All Organisms → cellular organisms → Bacteria	1059	Open in IMG/M
3300005445\|Ga0070708_100186385	Not Available	1940	Open in IMG/M
3300005445\|Ga0070708_100270129	All Organisms → cellular organisms → Bacteria	1599	Open in IMG/M
3300005468\|Ga0070707_102147737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	526	Open in IMG/M
3300005518\|Ga0070699_101627744	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	591	Open in IMG/M
3300005558\|Ga0066698_10307081	All Organisms → cellular organisms → Bacteria	1098	Open in IMG/M
3300005568\|Ga0066703_10067649	All Organisms → cellular organisms → Bacteria	2040	Open in IMG/M
3300005713\|Ga0066905_100893451	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	777	Open in IMG/M
3300005764\|Ga0066903_100164366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3227	Open in IMG/M
3300005764\|Ga0066903_100323728	All Organisms → cellular organisms → Bacteria	2464	Open in IMG/M
3300005764\|Ga0066903_100809640	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1677	Open in IMG/M
3300005764\|Ga0066903_100873132	All Organisms → cellular organisms → Bacteria	1623	Open in IMG/M
3300005764\|Ga0066903_101002880	All Organisms → cellular organisms → Bacteria	1527	Open in IMG/M
3300005764\|Ga0066903_101529549	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1261	Open in IMG/M
3300005764\|Ga0066903_101611691	Not Available	1231	Open in IMG/M
3300005764\|Ga0066903_101647873	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1219	Open in IMG/M
3300005764\|Ga0066903_102182766	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1067	Open in IMG/M
3300005764\|Ga0066903_102437463	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1012	Open in IMG/M
3300005764\|Ga0066903_103070620	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	904	Open in IMG/M
3300005764\|Ga0066903_103370920	Not Available	863	Open in IMG/M
3300005764\|Ga0066903_106373601	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	616	Open in IMG/M
3300005764\|Ga0066903_107252789	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300005764\|Ga0066903_108773286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	513	Open in IMG/M
3300006854\|Ga0075425_100225318	All Organisms → cellular organisms → Bacteria → Proteobacteria	2156	Open in IMG/M
3300006854\|Ga0075425_100572195	All Organisms → cellular organisms → Bacteria	1300	Open in IMG/M
3300006854\|Ga0075425_102782419	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	538	Open in IMG/M
3300007076\|Ga0075435_100882652	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300009792\|Ga0126374_10114971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1560	Open in IMG/M
3300009792\|Ga0126374_10365065	All Organisms → cellular organisms → Bacteria → Proteobacteria	996	Open in IMG/M
3300009792\|Ga0126374_11318149	Not Available	584	Open in IMG/M
3300010043\|Ga0126380_10222546	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1283	Open in IMG/M
3300010046\|Ga0126384_10527884	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1022	Open in IMG/M
3300010047\|Ga0126382_10023901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	3235	Open in IMG/M
3300010047\|Ga0126382_10093091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	1923	Open in IMG/M
3300010047\|Ga0126382_10435851	Not Available	1034	Open in IMG/M
3300010047\|Ga0126382_12236292	Not Available	527	Open in IMG/M
3300010048\|Ga0126373_13234394	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	507	Open in IMG/M
3300010358\|Ga0126370_10720527	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300010358\|Ga0126370_11516478	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	638	Open in IMG/M
3300010359\|Ga0126376_11385417	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300010359\|Ga0126376_12693947	Not Available	546	Open in IMG/M
3300010359\|Ga0126376_13190940	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	507	Open in IMG/M
3300010360\|Ga0126372_10352364	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1321	Open in IMG/M
3300010360\|Ga0126372_10419893	All Organisms → cellular organisms → Bacteria	1228	Open in IMG/M
3300010360\|Ga0126372_10527355	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1116	Open in IMG/M
3300010360\|Ga0126372_11691819	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	674	Open in IMG/M
3300010360\|Ga0126372_12038876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	621	Open in IMG/M
3300010362\|Ga0126377_10584966	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1159	Open in IMG/M
3300010362\|Ga0126377_11619015	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300010366\|Ga0126379_10060140	All Organisms → cellular organisms → Bacteria	3180	Open in IMG/M
3300010376\|Ga0126381_100719222	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1429	Open in IMG/M
3300010376\|Ga0126381_104313152	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	551	Open in IMG/M
3300010376\|Ga0126381_105037780	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	506	Open in IMG/M
3300010398\|Ga0126383_10154158	All Organisms → cellular organisms → Bacteria	2147	Open in IMG/M
3300010398\|Ga0126383_10612354	All Organisms → cellular organisms → Bacteria	1161	Open in IMG/M
3300010398\|Ga0126383_11639657	Not Available	732	Open in IMG/M
3300010398\|Ga0126383_12317231	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	623	Open in IMG/M
3300012948\|Ga0126375_10247589	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1205	Open in IMG/M
3300012948\|Ga0126375_10287081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1135	Open in IMG/M
3300012948\|Ga0126375_11660145	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	552	Open in IMG/M
3300012971\|Ga0126369_10120395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2417	Open in IMG/M
3300012971\|Ga0126369_11962782	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	673	Open in IMG/M
3300015371\|Ga0132258_10393011	All Organisms → cellular organisms → Bacteria	3443	Open in IMG/M
3300015374\|Ga0132255_101430074	All Organisms → cellular organisms → Bacteria → Proteobacteria	1045	Open in IMG/M
3300016294\|Ga0182041_11240713	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	681	Open in IMG/M
3300016357\|Ga0182032_11764646	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	540	Open in IMG/M
3300016371\|Ga0182034_10489371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1024	Open in IMG/M
3300016404\|Ga0182037_10193097	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1573	Open in IMG/M
3300016404\|Ga0182037_10615027	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	923	Open in IMG/M
3300025910\|Ga0207684_10551294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas azotifigens	986	Open in IMG/M
3300025922\|Ga0207646_10218040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1724	Open in IMG/M
3300025937\|Ga0207669_10497361	All Organisms → cellular organisms → Bacteria	975	Open in IMG/M
3300027527\|Ga0209684_1005375	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2121	Open in IMG/M
3300027907\|Ga0207428_10168218	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1661	Open in IMG/M
3300031544\|Ga0318534_10126210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1471	Open in IMG/M
3300031546\|Ga0318538_10373985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	770	Open in IMG/M
3300031573\|Ga0310915_10622702	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	764	Open in IMG/M
3300031573\|Ga0310915_11280642	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	505	Open in IMG/M
3300031640\|Ga0318555_10192480	All Organisms → cellular organisms → Bacteria	1099	Open in IMG/M
3300031668\|Ga0318542_10113528	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1319	Open in IMG/M
3300031679\|Ga0318561_10465275	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	696	Open in IMG/M
3300031719\|Ga0306917_10368320	All Organisms → cellular organisms → Bacteria	1119	Open in IMG/M
3300031720\|Ga0307469_10231610	All Organisms → cellular organisms → Bacteria	1470	Open in IMG/M
3300031740\|Ga0307468_100061784	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2027	Open in IMG/M
3300031740\|Ga0307468_101807688	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	579	Open in IMG/M
3300031747\|Ga0318502_10958584	Not Available	521	Open in IMG/M
3300031768\|Ga0318509_10081871	Not Available	1713	Open in IMG/M
3300031779\|Ga0318566_10048137	All Organisms → cellular organisms → Bacteria	2019	Open in IMG/M
3300031796\|Ga0318576_10081615	All Organisms → cellular organisms → Bacteria	1454	Open in IMG/M
3300031798\|Ga0318523_10459657	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300031820\|Ga0307473_10278158	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1041	Open in IMG/M
3300031833\|Ga0310917_10880370	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300031846\|Ga0318512_10387280	Not Available	702	Open in IMG/M
3300031879\|Ga0306919_10026242	All Organisms → cellular organisms → Bacteria	3609	Open in IMG/M
3300031880\|Ga0318544_10385403	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	545	Open in IMG/M
3300031890\|Ga0306925_11627285	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300031890\|Ga0306925_12085141	Not Available	532	Open in IMG/M
3300031910\|Ga0306923_10160079	All Organisms → cellular organisms → Bacteria	2571	Open in IMG/M
3300031941\|Ga0310912_10734318	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300031941\|Ga0310912_11040812	Not Available	627	Open in IMG/M
3300031945\|Ga0310913_10912148	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	618	Open in IMG/M
3300031954\|Ga0306926_12402520	Not Available	581	Open in IMG/M
3300032041\|Ga0318549_10133168	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1100	Open in IMG/M
3300032043\|Ga0318556_10724728	Not Available	517	Open in IMG/M
3300032052\|Ga0318506_10472790	Not Available	555	Open in IMG/M
3300032055\|Ga0318575_10137398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1208	Open in IMG/M
3300032063\|Ga0318504_10594324	Not Available	531	Open in IMG/M
3300032064\|Ga0318510_10159879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	893	Open in IMG/M
3300032065\|Ga0318513_10465577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	618	Open in IMG/M
3300032076\|Ga0306924_10639122	All Organisms → cellular organisms → Bacteria	1201	Open in IMG/M
3300032091\|Ga0318577_10310811	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	754	Open in IMG/M
3300032180\|Ga0307471_101866915	Not Available	751	Open in IMG/M
3300032205\|Ga0307472_100379961	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium RBG_16_73_20	1173	Open in IMG/M
3300032205\|Ga0307472_100747097	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300032261\|Ga0306920_101840836	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300032261\|Ga0306920_103136038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas oryzicola	620	Open in IMG/M
3300032770\|Ga0335085_11079771	Not Available	861	Open in IMG/M
3300033290\|Ga0318519_10356115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	866	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.28%
Host-Associated	Host-Associated	5.97%
Engineered	Engineered	0.75%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.28%
Plants	Host-Associated → Plants	5.97%
Solid Waste	Engineered → Solid Waste	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.28%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.48%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.49%
Grass	Engineered → Solid Waste → Grass	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.66%
Loam	Environmental → Terrestrial → Soil → Loam	23.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.49%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.75%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.75%
Composting	Engineered → Solid Waste → Grass → Composting	0.75%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	38.06%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.12%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	18.66%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.48%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.49%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.75%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.75%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.75%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	26.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.64%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	18.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.45%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.73%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.73%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.49%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.75%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.75%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459017	Litter degradation ZMR4	Engineered	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027527	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4ZMR_02514930	2170459017	Switchgrass, Maize And Mischanthus Litter	MLLAALYAFFQEHERCGDLDSGLESDRVWLACSACGAVINRCADDE
F14TC_1005798772	3300000559	Soil	MSLLADLDAFFQEHQHCGDLDSAVEGHRMWMTCTCGAAISRPADDD*
JGI1027J12803_1005556622	3300000955	Soil	AVTLLDALYAFYQEHARCGDLGSAIEGDRVWMTCTCGARIERDADRD*
Ga0066398_102211421	3300004268	Tropical Forest Soil	VSVTLLADLDAFYLEHQYSGELDSAVEDDRVWVTCTCGAVINRCADDE*
Ga0066395_102906801	3300004633	Tropical Forest Soil	VTLLADLDAFYPEHQYCGELDSAVEDDRVWMACTCGAVINRCADDD*
Ga0066678_104520922	3300005181	Soil	MRFLAALDASFQEHRRCGDLTGEVEGDRVWMTCSCSAGISRSAPVEDNR*
Ga0066388_1000035711	3300005332	Tropical Forest Soil	VPLFADLDAFYLEHERCGDLDSGLDGDRVWMACSARGAVINRNADDD*
Ga0066388_1007800883	3300005332	Tropical Forest Soil	MKIYQEHGRCGELNSAVDGDRVWMSCTCGAVICRCADDD*
Ga0066388_1022987902	3300005332	Tropical Forest Soil	VTLADLDAFYLEHQYCGELDSAVEDDRVWMACTCGAVINRCADDD*
Ga0066388_1049896452	3300005332	Tropical Forest Soil	VREQRNRDLLADLYAFFQEHQYCGELDGGVDGDRVWMACACGAAINRRADDA*
Ga0066388_1052631582	3300005332	Tropical Forest Soil	VRAQRGGFLADLCAFYLEHERCGELDSAVEGDRVWIACTCGAVISRRIHDD*
Ga0066388_1068808472	3300005332	Tropical Forest Soil	VALLDALYAFFQEHRRCGDLDGDRVSMACICGAAISRRADDD*
Ga0008090_155317712	3300005363	Tropical Rainforest Soil	MLLSDLDAFYLEHERCGDLDSTVEGERVWMTCTCGAVINRCADDD*
Ga0070708_1001863852	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VTLLDALYAFCQKHERCGDLDSGLDGDLVWMTCTCGAAISRNADRD*
Ga0070708_1002701293	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VTVLDALYAFYQEHERCGVLDSAVDGDRVWMTCTCGAVINRCADDD*
Ga0070707_1021477372	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	LRVGSPAVTLLADLDAFFQEHRRCGDLDSAVEGDRVWMTCTCGAAISRNADRD*
Ga0070699_1016277442	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VGDQRVPHLISDLDAFLQEHRRCGDPDAAVEGDRVWMTCTCGAVISRRVDDD*
Ga0066698_103070812	3300005558	Soil	MHLADLDAFDLEHRCCGELESGVEDDRVWMMCTCGA
Ga0066703_100676491	3300005568	Soil	QEHRYCGELESGLEGDFVWMRCTCGAVIWRHQDD*
Ga0066905_1008934511	3300005713	Tropical Forest Soil	MRSSAKPTLLAVLYAFYRDHCRCGDLDSAVEDDRVWMTCTCGAVINRSADDD*
Ga0066903_1001643662	3300005764	Tropical Forest Soil	VTLFADLDAFDLEHEHCGELDSAIEDDRVWMSCTCGAVISRCADDD*
Ga0066903_1003237281	3300005764	Tropical Forest Soil	MTLLDALYAFYLEHERCGELDSGLDGDRIWMTCTCGALINRCADDD*
Ga0066903_1008096403	3300005764	Tropical Forest Soil	VRSETLTRHRAPSSLLPVTLLEDIEAFYQEHERCGELDSAVDGDQVWMTCTCGAVINGSADDD*
Ga0066903_1008731321	3300005764	Tropical Forest Soil	TVIDALYAFFHEYERRGDLDSGVDGDRVWMACTCGAVIYRCADDD*
Ga0066903_1010028802	3300005764	Tropical Forest Soil	VLFADLDAFYLKHERCGDLDSAVEDNRVCMTCTCGAVISRRVDDE*
Ga0066903_1015295491	3300005764	Tropical Forest Soil	VRRVTSSAVTLLAALYAFYLEHQYCGDLDSAVEGDRVWMACCAVINRGADDD*
Ga0066903_1016116913	3300005764	Tropical Forest Soil	AFYQEHERCGEIDSAVEDDRVWMTCTCGAVISRCTDDD*
Ga0066903_1016478733	3300005764	Tropical Forest Soil	VHQREARMTLFTDLDAFCLEHERCGELDSVVDGDCVWMACTCGAVINRCADND*
Ga0066903_1021827662	3300005764	Tropical Forest Soil	VTLLAALHAFFQEHERCGDLDSAVDGDRVWMVCSTWGAVINRCADD*
Ga0066903_1024374632	3300005764	Tropical Forest Soil	VTLLGDLDAFYLEHERCGEIDSAVERDRVWMTCTCGAVISRRIHDD*
Ga0066903_1030706203	3300005764	Tropical Forest Soil	LTLGTVRRGPEYPDDLDAFCLEHEHCGELDSAVEGDRVWMTRTCGAVISRCTDDD*
Ga0066903_1033709201	3300005764	Tropical Forest Soil	MTLFTDLDAFYLEHQYCGELDSAVQDDRVWMTCTCGAVINRCADDDD*
Ga0066903_1063736012	3300005764	Tropical Forest Soil	VAGVTLLADLDAFYLEHQYCGELDSAVEDGRVWMTCTCGAVINRCAGDD*
Ga0066903_1072527892	3300005764	Tropical Forest Soil	MLLADLDAFVQEHERCDDLDSAVDGDRVWMACTCGAVMNRCADDD*
Ga0066903_1087732861	3300005764	Tropical Forest Soil	GPEYPDDLDAFCLEHESCGDLDSAVESDRVWMACTSGAVINRCVDDD*
Ga0066665_103251423	3300006796	Soil	MLLADLYAFYLEHRTCGELDSRVEGELVWMTCTCGAVINAAALPQGDCD
Ga0075425_1002253182	3300006854	Populus Rhizosphere	MTVLDALSAFVQEHERCGDLDSGLDGDYVWMTCTCGARIEQDADYD*
Ga0075425_1005721953	3300006854	Populus Rhizosphere	VTLLADLDAFLQEHPRCGDLDGEVEGDRVWMACTCGAVINRYADDD*
Ga0075425_1027824191	3300006854	Populus Rhizosphere	VTVLDALYAFYQEDERCGDLDSGLDGDRVWMTCTCGAVINRS
Ga0075435_1008826521	3300007076	Populus Rhizosphere	VALLADLNAFCQEHRRCGDLDSAVEGDRVWMTCTCGAVINRSADDD*
Ga0126374_101149712	3300009792	Tropical Forest Soil	VTLLADLDAFYLEHQYCGELHSAVEDDRVWMTRTCGAVINRCADDD*
Ga0126374_103650651	3300009792	Tropical Forest Soil	VTLLADLDAFYQEHERRGERGQRLDGDRVWMACTCGAVINRGADDD*
Ga0126374_113181492	3300009792	Tropical Forest Soil	VLDPRGGTLFDALYAFFQEHQRCGDLDSAVENDRVWMACTCGALINRCADDD*
Ga0126380_102225463	3300010043	Tropical Forest Soil	VTLLADLDAFYLEHQYSGELDSAVEDDRVWVTCPCGAVINRCADDE*
Ga0126384_105278842	3300010046	Tropical Forest Soil	VTLLAALYAFFLEHERCGELDSAVDGDRVGMACTWGAVINRCADDD*
Ga0126382_100239014	3300010047	Tropical Forest Soil	VSVTLLADLDAFYLEHQYSGELDSAVEDDRVWVTCPCGAVINRCADDE*
Ga0126382_100930913	3300010047	Tropical Forest Soil	VALLDALYAFYQEHQRCGDLDSRLDGDRVWMACTCGAAINRCADDD*
Ga0126382_104358512	3300010047	Tropical Forest Soil	VRGAEEGGGVTLLDALYAFFQEHRRCGDLDSGLDGDRVWVACTCGAVINRCANDD*
Ga0126382_122362922	3300010047	Tropical Forest Soil	EDRGGQAHVTLLDALYAFYQEHERRGNLDSGLDGNRVWIACTCGAAINRCAGDD*
Ga0126373_132343942	3300010048	Tropical Forest Soil	VRLLDALRAFVQEHEYCGELDSAVEGAHVWMTCTCGAVINHSADDD*
Ga0126370_107205273	3300010358	Tropical Forest Soil	VTLLEDIEAFYREHERCGELDSAVDGDRVWMTCTCGAMINRSADDD*
Ga0126370_115164782	3300010358	Tropical Forest Soil	LLDDLDALYLEHERCGELDSAVEGDRVWMTCTCGAVISRCADDD*
Ga0126376_113854172	3300010359	Tropical Forest Soil	VEDRGHHTNVTLLDALYAFYQEHERRGDLDSAVEGERVWMTCSCGAVIRRRVDDE*
Ga0126376_126939471	3300010359	Tropical Forest Soil	VALLDALYAFYQKHERWGDLDSGLDGDRVWMACTCGAVISRRVDDD*
Ga0126376_131909401	3300010359	Tropical Forest Soil	VRAQRGGLLADLYAFYLDHERCGELGSAVEDDRVWMTCTCGAVIKRCADDD*
Ga0126372_103523642	3300010360	Tropical Forest Soil	FTDLDAFYLEHQLLLELDSAVGGDRVWMTCTCGAVINRCADDD*
Ga0126372_104198932	3300010360	Tropical Forest Soil	VTLLADLDAFYQEHERRGELGQRLDGDRVWMACTCGAVINRGADDD*
Ga0126372_105273552	3300010360	Tropical Forest Soil	LVSVTLLDALYAFYQEHERCGDLDSGLDVDRVWMACTCRAVINPCADDD*
Ga0126372_116918192	3300010360	Tropical Forest Soil	VTLLADLDAFYLEHERRGDLDSGFDGDRVWMACTCGAAINRCTEDD*
Ga0126372_120388761	3300010360	Tropical Forest Soil	MTLLADLDAFYQEHERCGALDSADDGDRVWMACRCGAAINRCADDD*
Ga0126377_105849661	3300010362	Tropical Forest Soil	VTLLAVLYAFFQEHEYCGDLDSAAEDDRVWMACTCGAVINRCADDD*
Ga0126377_116190152	3300010362	Tropical Forest Soil	VTLLADLDAFYLEHQYCGELDSAVEDDRVWMACPCGAVINRCAEDE*
Ga0126379_100601402	3300010366	Tropical Forest Soil	VTLLADLDAFYPEHQYCGELDSAVEDDRVWVTCPCGAVINRCADDE*
Ga0126381_1007192222	3300010376	Tropical Forest Soil	VRDPGDRHLLDDLGALYLEHERCGELDSAVEGDRVWMTCTCGAVISRCADDD*
Ga0126381_1043131521	3300010376	Tropical Forest Soil	VTLLAALYAFYLEHQYCGDLDSAVEGDRVWMACCAVINRGADDD*
Ga0126381_1050377802	3300010376	Tropical Forest Soil	VTLLADLDAFYPEHQYCGELDSAVDGDRVWMACTCGAVINRCTADD*
Ga0126383_101541582	3300010398	Tropical Forest Soil	VGGIERQIDQAGVTLIDALYAFFLEHERCGELDSAVEDDRVWMTCTCGAPIRRRVDDD*
Ga0126383_106123541	3300010398	Tropical Forest Soil	LYAFYQEHERCGEIDSAVEDDRVWMTCTCGAVISRCTDDD*
Ga0126383_116396572	3300010398	Tropical Forest Soil	MTLLADLDAFYQEHERCGDLDSGLDGDRVWMACTCGVVINRYTDDE*
Ga0126383_123172311	3300010398	Tropical Forest Soil	MLDFDSHSVLSALYAFFQEHERCGDLDSAVDAVWMTCTCGAVISRCADDD*
Ga0126375_102475891	3300012948	Tropical Forest Soil	VTLLADLDAFYPEHQYCGELDSAVDGDRVWMTCTCGAVIKRCADD
Ga0126375_102870811	3300012948	Tropical Forest Soil	LTLLADVDAFYQEHERCGDLDSGLDGDHVWMACTCGVVISRYADED*
Ga0126375_116601451	3300012948	Tropical Forest Soil	LLDALYAFYQERERCGELDSAVENDRDWMACRCGAVINRCADDD*
Ga0126369_101203955	3300012971	Tropical Forest Soil	LASAGVTVLADLYAFYQEHERCGEIDSAVEDDRVWMTCTCGAVISRCTDDD*
Ga0126369_119627821	3300012971	Tropical Forest Soil	VTSSAVTLLAALYAFYLEHQYCGDLDSAVEGDRVWMACCAVINRRADDD*
Ga0132258_103930116	3300015371	Arabidopsis Rhizosphere	MTLLDDLHAFVQDRERCGDLDSAVEDDRVWMTRTCGAVINRSADDG*
Ga0132255_1014300741	3300015374	Arabidopsis Rhizosphere	KSLLADLAAFLQEHSRRGDLDSGLDGDRVWMACSTRGAVINRCTDDD*
Ga0182041_112407132	3300016294	Soil	DRAGVTLIAALYTFYQEHERCGELDSAVDGDRVWMACTCGAVINRCADDD
Ga0182032_117646461	3300016357	Soil	ADLDAFFQEHERCGELDSAVDGDRVWMRCTCGAVINRCADDD
Ga0182034_104893711	3300016371	Soil	LVIAAPGSLLPVTLLDSLYAFYQEHERCGELDSAVEGDRVWMACTCGAVINRSANDD
Ga0182037_101930972	3300016404	Soil	YAFREHHCCGDLDGGVDGDRVWMACIACGAVINRCADDE
Ga0182037_106150272	3300016404	Soil	VTLLAALHAFSQEHERCGELDSAVDGDRVWMSCTCGAVINRCADDD
Ga0207684_105512941	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VTVLDALYAFYQEHERCGVLDSAVDGDRVWMTCTCGAVINRCADAD
Ga0207646_102180402	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VTVLDALYAFYQEHERCGVLDSAVDGDRVWMTCTCGAVINRCADDD
Ga0207669_104973612	3300025937	Miscanthus Rhizosphere	VVSLLDDLHAFVQNHEHCGDLDSAVEGERVWMTCTCGAVINRSADDD
Ga0209684_10053752	3300027527	Tropical Forest Soil	LADLYAFYQEHERCGDLDSGLDVDRVWMACTCRAVINPCADDD
Ga0207428_101682184	3300027907	Populus Rhizosphere	GAALEAFSLEHEYCGELDSAVENDHVWMTCTCGAVINRPADHD
Ga0318534_101262101	3300031544	Soil	VTLLAALHAFSQEHERCGELDSAVDGDRVWMACGAVINGCADDE
Ga0318541_101509152	3300031545	Soil	RLIVASGSFVGVTLLAALHAFSQEHERCGELDSAVDGDRVWMACGAVINGCADDE
Ga0318538_103739852	3300031546	Soil	LAALHAFSQEHERCGELDSAVDGDRVWMACGAVINGCADDE
Ga0310915_106227021	3300031573	Soil	VPLFADLDAFFQEHERCGELDSAVDGDRVWMRCTCGAVINRCADDD
Ga0310915_112806421	3300031573	Soil	MSDLDAFFLEQERCGELDSADRVWMMCTCGAVISRCADDD
Ga0318555_101924802	3300031640	Soil	LVIAAPGSLLPVTLLNALYAFSQEHERCGELDSAVDGDRVWMACTCGAVISRCADDD
Ga0318542_101135281	3300031668	Soil	SSVAGVTLLADLDAFYREHECCGELDSAVEDDRVWMTCTCGAVISRCAHDD
Ga0318561_104652752	3300031679	Soil	VPPLDTLYALYLEHEHCGELQSAVEDDRVWMACTCGAVINRSADDD
Ga0306917_103683202	3300031719	Soil	VTLLDALYAFFQEHECCGDLDSGLDGDHGWMTCTRGAVINRSADDD
Ga0307469_102316104	3300031720	Hardwood Forest Soil	VALLADPDAYYLEHEPCDAIDSAVETNRVWMTCTCGAVTNRCADDD
Ga0307468_1000617842	3300031740	Hardwood Forest Soil	VTLLADLDAFFQEHPRCGDPDSAVEGDRVWMTCTCGAVIGTARPDDD
Ga0307468_1018076881	3300031740	Hardwood Forest Soil	VTVLLLPPAFVQEHERCGDLDSAVEGNRVWMICTCGAVISRSADDD
Ga0318502_109585842	3300031747	Soil	LHAFSQEHERCGELDSAVDGDRVWMACGAVINGCADDE
Ga0318509_100818713	3300031768	Soil	VTLLAALHAFSQEHERCGELDSAVDGDRVWMACGAVIN
Ga0318498_101572052	3300031778	Soil	LVIAAPGSLLPVTLLNALYAFSQEHERCGDLDSAVDGDHVWMVCSAAR
Ga0318566_100481374	3300031779	Soil	VALLDALYAFYQEHERCGDLDSGLEGDRVWMACSASINRCADDD
Ga0318576_100816151	3300031796	Soil	RRGRGLARRPLFFQEHERCGELDSAVDGDRVWMACTCGAVISRCADDD
Ga0318523_104596572	3300031798	Soil	FYLEPERCGDLDSAVDGDRVWMTCTCGAVINRCADDD
Ga0307473_102781581	3300031820	Hardwood Forest Soil	MLLAALYAFFQEHERCGDLDRGLDGDRVWKACTCGAVINRCADDD
Ga0310917_108803701	3300031833	Soil	SLLPVTLLNALYAFSQEHERCGELDSAVDGDRVWMACTCGAVISRCADDD
Ga0318512_103872802	3300031846	Soil	VALLDALYAFCQEHERRGDRDSAVDGDRVWMACGAVINGCADDE
Ga0306919_100262426	3300031879	Soil	VTLLADLDAFYREHECCGELDSAVEDDRVWMTCTCGAVISRCAHDD
Ga0318544_103854031	3300031880	Soil	VTLLADLDAFYREHECCGELDSAVEDDRVWMTCTCGAVISRC
Ga0306925_116272852	3300031890	Soil	RPLFFQEHERCGELDSAVDGDRVWMACTCGAVINRCADDD
Ga0306925_120851411	3300031890	Soil	YAFYQEPERCGELDSAVDGDRVWMACSACGAVINRCADDD
Ga0306923_101600795	3300031910	Soil	GRGLARRPLFFQEHERCGELDSAVDGDRVWMACTCGAVINRCADDD
Ga0310912_107343181	3300031941	Soil	SSGGRLDALYAFYQEHDRCGDLDSGLDGDRVWMPCGACGAVINRGADDD
Ga0310912_110408121	3300031941	Soil	VTLLAALHAFSQEHERCGELDSAVDGDRVWMACGAVINGCADD
Ga0310913_109121482	3300031945	Soil	VTLLADLDAFYLEHQYCGELDSAVAGDRVWMACTCGTVINRCAD
Ga0306926_124025201	3300031954	Soil	VTLLDALYAFYQEHERCGDLDSGFDGDRVWMACNACGAVINRCAHDDQ
Ga0318549_101331682	3300032041	Soil	ALYAFREHHCCGDLDGGVDGDRVWMACIACGAVINRCADDE
Ga0318556_107247281	3300032043	Soil	LYAFYQEHDRCGDLDSGLDGDRVWMPCGACGAVINRGADDD
Ga0318506_104727902	3300032052	Soil	VTLLAALHAFSQEHERCGELDSAVDGDRVWMACGAVI
Ga0318575_101373981	3300032055	Soil	LLAALHAFSQEHERCGELDSAVDGDRVWMACGAVINGCADDE
Ga0318504_105943242	3300032063	Soil	LYAFCQEHERRGDRDSAVDGDRVWMACTCGAAINRCADDD
Ga0318510_101598792	3300032064	Soil	FSQEHERCGELDSAVDGDRVWMACGAVINGCADDE
Ga0318513_104655771	3300032065	Soil	VTLLNALYAFSQEHERCGELDSAVDGDRVWMACTCGAVIS
Ga0306924_106391221	3300032076	Soil	RIIGAPRTCFSVPLFADLDAFFQEHERCGELDSAVDGDRVWMRCTCGAVINRCADDD
Ga0318577_103108112	3300032091	Soil	VTLLADLDAFYREHECCGELDSAVEDDRVWMTCTCGAV
Ga0307470_107200471	3300032174	Hardwood Forest Soil	VTLLADLDAFFQEHPRCGDPDSAVEGDRVWMTCTCGAVIGTAR
Ga0307471_1018669151	3300032180	Hardwood Forest Soil	VTVLLLPPAFVQEHERCGDLDSAVEGNRVWMICTCGAVISRSADDE
Ga0307472_1003799612	3300032205	Hardwood Forest Soil	VALLADLNAFFQEHRRCGDLDSAVEGDRAWMTCTCGAVISRSADDD
Ga0307472_1007470972	3300032205	Hardwood Forest Soil	GAEESRGVPLLTDLGAFYLEHEHCGDLDSAVERDRVWMTYTCGAVITRYADDDD
Ga0306920_1018408361	3300032261	Soil	YAFFQEHECCGDLDSGLDGDHGWMTCTRGAVINRSADDD
Ga0306920_1031360381	3300032261	Soil	VPLFADLDAFFQEHERCGELDSAVDGDRVWMRCTCGAVINRCAD
Ga0335085_110797711	3300032770	Soil	MTLLDDLHAFFQEHARCGDLDNGLDGDRVWVACSACGAAINRCADDD
Ga0318519_103561151	3300033290	Soil	LYALYLEHEHCGELQSAVEDDRVWMACTCGAVINRSADDD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F058846

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences