NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F058841

Metagenome / Metatranscriptome Family F058841

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F058841
Family Type Metagenome / Metatranscriptome
Number of Sequences 134
Average Sequence Length 70 residues
Representative Sequence MKLFDRLCAGTLFILAIVDCLLVPKTYTGRIWIFGTGLALFFTAMLNVLRIRNRRGVRGLKLFCITAN
Number of Associated Samples 112
Number of Associated Scaffolds 134

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 97.06 %
% of genes near scaffold ends (potentially truncated) 75.37 %
% of genes from short scaffolds (< 2000 bps) 67.16 %
Associated GOLD sequencing projects 108
AlphaFold2 3D model prediction Yes
3D model pTM-score0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (76.119 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(14.925 % of family members)
Environment Ontology (ENVO) Unclassified
(24.627 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(56.716 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 50.00%    β-sheet: 0.00%    Coil/Unstructured: 50.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.37
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 134 Family Scaffolds
PF01168Ala_racemase_N 86.57
PF03169OPT 10.45
PF00072Response_reg 0.75
PF0563523S_rRNA_IVP 0.75
PF14279HNH_5 0.75

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 134 Family Scaffolds
COG1297Predicted oligopeptide transporter, OPT familyGeneral function prediction only [R] 10.45

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms76.12 %
UnclassifiedrootN/A23.88 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2162886012|MBSR1b_contig_1528414All Organisms → cellular organisms → Bacteria1064Open in IMG/M
3300001546|JGI12659J15293_10061884All Organisms → cellular organisms → Bacteria837Open in IMG/M
3300002239|JGI24034J26672_10046632All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium737Open in IMG/M
3300002245|JGIcombinedJ26739_100512380All Organisms → cellular organisms → Bacteria1077Open in IMG/M
3300002245|JGIcombinedJ26739_100782207All Organisms → cellular organisms → Bacteria834Open in IMG/M
3300002917|JGI25616J43925_10083011All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1340Open in IMG/M
3300004092|Ga0062389_100019345All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae4751Open in IMG/M
3300004643|Ga0062591_100473983All Organisms → cellular organisms → Bacteria1065Open in IMG/M
3300005176|Ga0066679_10161404All Organisms → cellular organisms → Bacteria1410Open in IMG/M
3300005178|Ga0066688_10380114All Organisms → cellular organisms → Bacteria915Open in IMG/M
3300005327|Ga0070658_11512778All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium582Open in IMG/M
3300005335|Ga0070666_10131503All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1739Open in IMG/M
3300005355|Ga0070671_100434225All Organisms → cellular organisms → Bacteria1125Open in IMG/M
3300005434|Ga0070709_11028937All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium656Open in IMG/M
3300005450|Ga0066682_10227559All Organisms → cellular organisms → Bacteria → Acidobacteria1198Open in IMG/M
3300005450|Ga0066682_10728191All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium606Open in IMG/M
3300005455|Ga0070663_102116146All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium507Open in IMG/M
3300005541|Ga0070733_10964213All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium573Open in IMG/M
3300005556|Ga0066707_10925052All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium534Open in IMG/M
3300005712|Ga0070764_10315292All Organisms → cellular organisms → Bacteria906Open in IMG/M
3300005712|Ga0070764_10480315All Organisms → cellular organisms → Bacteria745Open in IMG/M
3300005921|Ga0070766_10519827All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium793Open in IMG/M
3300006796|Ga0066665_10880807All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium696Open in IMG/M
3300006800|Ga0066660_10973247All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium684Open in IMG/M
3300006893|Ga0073928_10392856All Organisms → cellular organisms → Bacteria1017Open in IMG/M
3300006893|Ga0073928_10949465All Organisms → cellular organisms → Bacteria587Open in IMG/M
3300009038|Ga0099829_11085681All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium663Open in IMG/M
3300009090|Ga0099827_10196831All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1674Open in IMG/M
3300009148|Ga0105243_11561109All Organisms → cellular organisms → Bacteria685Open in IMG/M
3300009162|Ga0075423_13051919All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300009177|Ga0105248_10258562All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1960Open in IMG/M
3300009519|Ga0116108_1144305All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium708Open in IMG/M
3300009632|Ga0116102_1012647All Organisms → cellular organisms → Bacteria → Acidobacteria3046Open in IMG/M
3300010343|Ga0074044_10421744All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium873Open in IMG/M
3300010379|Ga0136449_100402793All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2427Open in IMG/M
3300011271|Ga0137393_11344644All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium603Open in IMG/M
3300011271|Ga0137393_11528301All Organisms → cellular organisms → Bacteria557Open in IMG/M
3300012205|Ga0137362_10751728All Organisms → cellular organisms → Bacteria837Open in IMG/M
3300012501|Ga0157351_1041192All Organisms → cellular organisms → Bacteria577Open in IMG/M
3300012683|Ga0137398_10989802All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium583Open in IMG/M
3300013102|Ga0157371_10098202All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2076Open in IMG/M
3300013296|Ga0157374_11154891All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium795Open in IMG/M
3300013296|Ga0157374_11676016All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium660Open in IMG/M
3300014169|Ga0181531_10191040All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1243Open in IMG/M
3300014489|Ga0182018_10300410All Organisms → cellular organisms → Bacteria873Open in IMG/M
3300014489|Ga0182018_10646825All Organisms → cellular organisms → Bacteria553Open in IMG/M
3300014495|Ga0182015_10022465All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae5096Open in IMG/M
3300015241|Ga0137418_11276240All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300015374|Ga0132255_100363475All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2099Open in IMG/M
3300017792|Ga0163161_10008769All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis6990Open in IMG/M
3300017823|Ga0187818_10186203All Organisms → cellular organisms → Bacteria906Open in IMG/M
3300017972|Ga0187781_11144906All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300018007|Ga0187805_10634222All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium506Open in IMG/M
3300018009|Ga0187884_10109254All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1196Open in IMG/M
3300018043|Ga0187887_10059261All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2340Open in IMG/M
3300018433|Ga0066667_10607508All Organisms → cellular organisms → Bacteria912Open in IMG/M
3300020579|Ga0210407_10506806All Organisms → cellular organisms → Bacteria943Open in IMG/M
3300020579|Ga0210407_10580289All Organisms → cellular organisms → Bacteria874Open in IMG/M
3300020581|Ga0210399_11432144All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium539Open in IMG/M
3300020582|Ga0210395_10010131All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis7016Open in IMG/M
3300020582|Ga0210395_10195176All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1518Open in IMG/M
3300020582|Ga0210395_11030014All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium609Open in IMG/M
3300021168|Ga0210406_11310253All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300021404|Ga0210389_10024349All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae4669Open in IMG/M
3300021407|Ga0210383_10190862All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1750Open in IMG/M
3300021432|Ga0210384_10673598All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium926Open in IMG/M
3300021433|Ga0210391_10014491All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis6370Open in IMG/M
3300021477|Ga0210398_11407790All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium545Open in IMG/M
3300021479|Ga0210410_11080124All Organisms → cellular organisms → Bacteria692Open in IMG/M
3300022557|Ga0212123_10724897All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium608Open in IMG/M
3300022734|Ga0224571_108315All Organisms → cellular organisms → Bacteria705Open in IMG/M
3300023012|Ga0228597_110685All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300025930|Ga0207701_11169116All Organisms → cellular organisms → Bacteria635Open in IMG/M
3300025931|Ga0207644_10149614All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1805Open in IMG/M
3300025981|Ga0207640_11518110All Organisms → cellular organisms → Bacteria602Open in IMG/M
3300025986|Ga0207658_11694139All Organisms → cellular organisms → Bacteria577Open in IMG/M
3300026482|Ga0257172_1059980All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium698Open in IMG/M
3300027562|Ga0209735_1024465All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1248Open in IMG/M
3300027583|Ga0209527_1133745All Organisms → cellular organisms → Bacteria552Open in IMG/M
3300027738|Ga0208989_10124832All Organisms → cellular organisms → Bacteria871Open in IMG/M
3300027767|Ga0209655_10176502All Organisms → cellular organisms → Bacteria705Open in IMG/M
3300027853|Ga0209274_10450247All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium666Open in IMG/M
3300027853|Ga0209274_10455051All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium662Open in IMG/M
3300027867|Ga0209167_10726831All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium542Open in IMG/M
3300027879|Ga0209169_10257641All Organisms → cellular organisms → Bacteria914Open in IMG/M
3300027911|Ga0209698_10934767All Organisms → cellular organisms → Bacteria649Open in IMG/M
3300027911|Ga0209698_11148667All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium574Open in IMG/M
3300028017|Ga0265356_1026989All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium622Open in IMG/M
3300028047|Ga0209526_10815039All Organisms → cellular organisms → Bacteria576Open in IMG/M
3300028381|Ga0268264_10192689All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1859Open in IMG/M
3300028906|Ga0308309_11745725All Organisms → cellular organisms → Bacteria527Open in IMG/M
3300029882|Ga0311368_10436458All Organisms → cellular organisms → Bacteria956Open in IMG/M
3300029951|Ga0311371_10008052All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae21210Open in IMG/M
3300030520|Ga0311372_11439223All Organisms → cellular organisms → Bacteria856Open in IMG/M
3300030879|Ga0265765_1003676All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1548Open in IMG/M
3300031040|Ga0265754_1017413All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium639Open in IMG/M
3300031708|Ga0310686_101512919All Organisms → cellular organisms → Bacteria1070Open in IMG/M
3300031708|Ga0310686_115743658All Organisms → cellular organisms → Bacteria → Acidobacteria1392Open in IMG/M
3300031708|Ga0310686_119016145All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium644Open in IMG/M
3300032160|Ga0311301_10753453All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1352Open in IMG/M
3300032160|Ga0311301_10826547All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1266Open in IMG/M
3300033545|Ga0316214_1012801All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1147Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil14.93%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil8.21%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil7.46%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil5.22%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil5.22%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.48%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland2.99%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil2.99%
PalsaEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa2.99%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa2.99%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.99%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland2.24%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring2.24%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil2.24%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.24%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere2.24%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil1.49%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog1.49%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment1.49%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.49%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.49%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter1.49%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.49%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.49%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere1.49%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.49%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.75%
Unplanted SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil0.75%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.75%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.75%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.75%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil0.75%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost0.75%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.75%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.75%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.75%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.75%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.75%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.75%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.75%
RootsHost-Associated → Plants → Roots → Unclassified → Unclassified → Roots0.75%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.75%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.75%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.75%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2162886012Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300001546Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1EnvironmentalOpen in IMG/M
3300002239Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2Host-AssociatedOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300002917Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cmEnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005327Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaGHost-AssociatedOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005712Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009519Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150EnvironmentalOpen in IMG/M
3300009632Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40EnvironmentalOpen in IMG/M
3300009640Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40EnvironmentalOpen in IMG/M
3300010343Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012501Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.170610EnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300013102Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaGHost-AssociatedOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300014160Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaGEnvironmentalOpen in IMG/M
3300014169Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaGEnvironmentalOpen in IMG/M
3300014489Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaGEnvironmentalOpen in IMG/M
3300014495Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaGEnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300017823Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3EnvironmentalOpen in IMG/M
3300017972Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300018007Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5EnvironmentalOpen in IMG/M
3300018009Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40EnvironmentalOpen in IMG/M
3300018017Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40EnvironmentalOpen in IMG/M
3300018030Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100EnvironmentalOpen in IMG/M
3300018043Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021433Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-OEnvironmentalOpen in IMG/M
3300021477Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-OEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300022557Paint Pots_combined assemblyEnvironmentalOpen in IMG/M
3300022727Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU3EnvironmentalOpen in IMG/M
3300022734Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU3Host-AssociatedOpen in IMG/M
3300023012Spruce litter microbial communities from Bohemian Forest, Czech Republic - CLU4EnvironmentalOpen in IMG/M
3300024225Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5Host-AssociatedOpen in IMG/M
3300024227Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026482Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-BEnvironmentalOpen in IMG/M
3300026514Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-BEnvironmentalOpen in IMG/M
3300027562Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027583Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027641Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027738Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027767Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027853Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)EnvironmentalOpen in IMG/M
3300027867Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027879Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027911Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300028017Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4Host-AssociatedOpen in IMG/M
3300028036Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE2Host-AssociatedOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028759Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300029882III_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300029951III_Palsa_N1 coassemblyEnvironmentalOpen in IMG/M
3300030520III_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300030813Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030879Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031040Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE6 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300033545Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE4Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
MBSR1b_0500.000022402162886012Miscanthus RhizosphereLFLLAIVECWLVPRDYTGRIWIFGTGLALLFVAMLNLLRIRNGYSVRGLKMFCIGANVVMTVFVAALMASIGG
JGI12659J15293_1006188423300001546Forest SoilMKLLDRLCAGTLFILSIVDCLLVPRTYTGRIWIFGTCLALLFAAMLNLLRIRNRPGVRGLKLFCVAANVIMLVFGIALMA
JGI24034J26672_1004663213300002239Corn, Switchgrass And Miscanthus RhizosphereVRHVDRVCAGALFLLAIVECWLVPRDYTGRIWIFGTGLALLFVAMLNLLRIRNGYSVRGLKMFCXGANVVMTVFVAALMASIGGEKTLG
JGIcombinedJ26739_10041619513300002245Forest SoilMRLFDKLCAGALFILAIVYCLLVPRTYTGRIWIFGTGLALLFTAMLNLLRLRN
JGIcombinedJ26739_10051238013300002245Forest SoilMTFLDRLGAGMLFVLAIVDCLLVPRTYTGRIWIFGTGLALLFTAMLNVLRIRNGRGVRGLKLSCLTANVTMLV
JGIcombinedJ26739_10078220713300002245Forest SoilMKLLDRLCAGTLFILSIVDCLLVPRTYTGRIWIFGTCLALLFAAMLNLLRIRNRPGVRGLKLFCVAANVIMLVFGIALM
JGI25616J43925_1008301113300002917Grasslands SoilMRLVDRLCAGTLFVIAVVDCLLVPRTYTGRIWIFGTGLALLFAAMLNILRVRNGREVKGLKLFCITANVTTFAFAIALMASIGKLRTLQ
Ga0062389_10001934553300004092Bog Forest SoilMKLNAMKLLDRLCAGTLFLLAIVECLLVPKTYTGRIWILGTYLALLFTAMLNVLRIRNGYAVRGLRMFC
Ga0062591_10047398323300004643SoilVRHVDRVCAGAFFLLAIVECWLVPRDYTGRIWIFGTGLALLFVAMLNLLRIRNGYSVRGLKMFCIGANVVMTVFVAALMASIGG
Ga0066679_1016140433300005176SoilMRIVDRLCAGTLFVLAVVECLMVPKTYAGRIWILGTDLALLFTAMLNVLRIRNSYVMQGLKMFGIAANVMMLVFVVALMASI
Ga0066688_1038011413300005178SoilMKIVDRLCAGTLFVLAIVECLMVPKTYVGRIWILGTDLALLFTAMLNVLRIRNGYVMQGMKMFCIAANVMMLVFVV
Ga0070658_1151277813300005327Corn RhizosphereVRHVDRVCAGAFFLLAIVECWLVPRDYTGRIWIFGTGLALLFVAMLNLLRIRNGYSVRGLKMFCIGANVVMTVFVAALMASIGGEKTLG
Ga0070666_1013150333300005335Switchgrass RhizosphereVRHVDRVCAGALFLLAIVECWLVPPDYTGRIWIFGTGLALLFVAMLNLLRIRNGYSVRGLKMFCIGANVVMTVFVAALMASIGGEKTLG
Ga0070671_10043422513300005355Switchgrass RhizosphereVRHLDRVFAGALFLLAIVECWLVPRDYTGRIWIFGTGLALLFVAMLNLLRIRNGYSVRGLKMFC
Ga0070709_1102893723300005434Corn, Switchgrass And Miscanthus RhizosphereMKLFDRACAGTLFVLAIVECLLVPKSYTGRIWLLGTNLAFLFTAMLNVLRIRNGYQVQGLKMFCITANLIML
Ga0066682_1022755913300005450SoilMKLFDRLCAGTLFILAIVDCLLVPKTYTGRIWIFGTGLPLFFTAMLNVLRIRNRREVRGLKLFCITANATM
Ga0066682_1072819113300005450SoilMKIVDRLCAGTLFVLAIVECLMVPKTYVGRIWILGTDLALLFTAMLNVLRIRNGYVMQGMKMFCIA
Ga0070663_10211614623300005455Corn RhizosphereLRRIDRVCAGGLFLLALVECWLVPREYTGRIWIFGTGLALLFTAMLNLLRIRNGYSVSGLRMFCVAANVAMTVFVAGLAISIGKANTLA
Ga0070733_1079354023300005541Surface SoilMRLLDRLCAGTIFVLAVVDCLLVPRTYTGRIWIFGTGLALVFSAMLNILRIRND
Ga0070733_1096421323300005541Surface SoilVKLLDQLCAGILFLVAIVDCLLVPKTYVGRIWIFGTGLALLFTAMFNVLRLRNGLGVRGLKLFCITANAAMFTFTIGLMASIGKSRT
Ga0066707_1092505213300005556SoilMKIVDRLCAGTLFVLAIVECLMVPKTYVGRIWILGTDLALLFTAMLNVLRIRNGYVMQGMKMFCIAANVMMLVFVVALMASIG
Ga0070764_1031529213300005712SoilMKLLDRLCAGTLFILSIVDCLLVPRTYTGRIWIFGTCLALLFAAMLNLLRIRNRPGVRGLKLFC
Ga0070764_1048031513300005712SoilMKLLDRLCAGTLFLLAIVECLLVPKSYPGRIWILGTYLALLFTAMLNLLRIRNGYAVRGLRMFCIAGNLTMLVFFAAL
Ga0070766_1051982723300005921SoilMRLFDKLCAGALFILAIVYCLLVPRTYNGRIWIFGTGLALLFTAMLNLLRLRNGYGVQGLRLFCITANLTMLVFVIALMASIGKSH
Ga0066665_1088080713300006796SoilMKLFDRLCAGTLFILAIVDCLLVPKTYTGRIWIFGTGLPLFFTAMLNVLRIRNRREVRGLKLFCITANATMVVFVIA
Ga0066660_1097324723300006800SoilMFFDRFCARIIFILAITDCLLVPRTYTGRIWIFGTGLALLFTAMLNVLRIRNGQAVRGLKLFCITANVTMFVFAIALMASIGKLRTLQ
Ga0075425_10103152313300006854Populus RhizosphereVRHADRVCAGALFLLAIVECWLVPRDYTGRIWIFGTGLALLFVAMLNLLRIRNGY
Ga0073928_1039285623300006893Iron-Sulfur Acid SpringMRLFDKLCAEAVFILAIVCCLLVPRTYTGRIWIFGTGLALLFTAMLNLLRLRNGYGVQGLRLFCIAANLM
Ga0073928_1094946513300006893Iron-Sulfur Acid SpringMKLLDQLCAGIIFILAIVDCLLVPRTYTGRIWIFGTGLALLFTAMLNLLRIRNGRGVKGLRLFCITANVTMLVFAIALI
Ga0099829_1108568113300009038Vadose Zone SoilMIFFDRLCAGVLFVLAIMDCLLVPRTYTGRIWIFGTGLALLFTAMLNVLRIRNSGFVKGLKLFCITANVTMLLFAVAL
Ga0099827_1019683113300009090Vadose Zone SoilMIFFDRLCAGVLFVLAIMDCLLVPRTYTGRIWIFGTGLALLFTAMLNVLRIRNSGFVKGLKLFCITANVTMLLF
Ga0099792_1031637713300009143Vadose Zone SoilMNLVDRLCASVLFVLAIVDCLRVPRTYTGRIWIFGTGLALLFTAMLNVLRI
Ga0105243_1156110913300009148Miscanthus RhizosphereVRHVDRVCAGALFLLAIVECWLVPRDYTGRIWIFGTGLALLFVAILNLLRIRNGYSVRGLKMFC
Ga0075423_1305191913300009162Populus RhizosphereVRHADRVCAGALFLLAIVECWLVPRDYTGRIWIFGTGLALLFVAMLNLLRIRNGYSVRGLRMFCIGANVVM
Ga0105248_1025856233300009177Switchgrass RhizosphereLFLLAIVECWLVPRGYTGRIWIFGTGLALLFVAMLNLLRIRNGYSVRGLKMFCIGANVVMTVFVAALMASIGGEKTLG
Ga0116108_114430523300009519PeatlandMKLLDWLCAGILFVLAIVSSLLVPRTYTGRIWIFGTCLALLFASMLNLLRIRNGPGVRGLKLFCIAANVAMLAFGIALMASIGRS
Ga0116102_101264713300009632PeatlandMRLFDRFCAGTIFVLAIVDCLHVPRTYMGRIWILGTGLALLFTAMLNLLRIRNGCGVQGLKL
Ga0116126_115630823300009640PeatlandMRLFDRFCAGTIFVLAIVDCLHVPRTYMGRIWILGTGLALLFTAMLNLLRIRNGCGVQ
Ga0074044_1042174413300010343Bog Forest SoilMKLLDQFCAAALFFLAIVDCMLVPRTYTGRIWILGTGLALLFTGMLNLLRTRNDREVRSLRLFCITANVTMLVFVIALIASIG
Ga0136449_10040279313300010379Peatlands SoilMRFFDRLCAGTLFTLAIVDCLLVPKDYTGRIWIFGTGLALLFTAMLNVLRICNGYGVKGLKLFCITANVTMLVFV
Ga0137393_1134464413300011271Vadose Zone SoilMIFFDRFCAGIIFILAIADCLLVPRTYTGRIWIFGTGMALLFAAMLNVLRIRNGQAVRGLKLF
Ga0137393_1152830113300011271Vadose Zone SoilMKLFDRLCAGTLFILAIVDCLLVPKTYTGRICIFGTGLALFFTAMLNVLRIRNGRGVRG
Ga0137362_1075172823300012205Vadose Zone SoilMKLFDRLCAGTLFILAIVDCLLVPKTYTGRIWIFGTGLALFFTAMLNVLRIRNRREVRGLKLFCNTANATMVVFVIALMA
Ga0137376_1015592913300012208Vadose Zone SoilMKLFDRLCAGTLFILAIVDYLLVPKTYTGRIWIFGTGLPLFFTAMLNFLRIRNRREV
Ga0157351_104119213300012501Unplanted SoilVRHVDRVCAGALFLLAIVECWLVPRDYTGRIWIFGTGLALLFVAMLNLLRIRNGYSVRGLKMFCIGANVV
Ga0137398_1098980223300012683Vadose Zone SoilMIFFDRLCAGVLFVLAIMDCLLVPRTYTGRIWIFGTGLALLFNAMLNVLRIRNSGPVKGLRVFCITANLIMLVFAVALMASIGRSRTLAN
Ga0137359_1011756713300012923Vadose Zone SoilMKLFDWLCAGILFVLAIVDCLLVPRTYTGRIWIFGTGLALFFTAILNVL
Ga0137359_1069351813300012923Vadose Zone SoilMNLVDRLCASVLFVLAIVDCLLVPKTYTGRIWIFGTGLALFFTAILNVL
Ga0126375_1140178323300012948Tropical Forest SoilMKWFDRACAGALFLLAIVECWLIPRNYPGRIWILGTGLALLFTAMLNLLRIRY
Ga0157371_1009820213300013102Corn RhizosphereVRHVDRVCAGAFFLLAIVECWLVPRDYTGRIWIFGTGLALLFVAMLNLLRIRNGYSVRGLKMFCIGANVVMTVF
Ga0157374_1115489123300013296Miscanthus RhizosphereLFLLAIVECWLVPRDYTGRIWIFGTGLALLFVAMLNLLRIRNGYSVRGLKMFCIGANVVMTVFVAALMASIGGEKTLG
Ga0157374_1167601613300013296Miscanthus RhizosphereLALRRIDRVCAGGLFLLAVVECWLVPREYTGRIWIFGTGLALLFTAMLNLLRIRNGYSVSGL
Ga0181517_1017495433300014160BogMKLLDWLCAGILFVLAIVSSLLVPRTYTGRIWIFGTCLALLFASMLNLLRIRNGPGVRGL
Ga0181531_1019104013300014169BogMKLLDWLCAGILFVLAIVSSLLVPRTYTGRIWIFGTCLALLFASMLNLLRIRNGPGVRGLKLFCIAANVAMLAFGIAL
Ga0182018_1030041033300014489PalsaMKLSDQLCAGALFVLAIVHCLLVPRTYTGRIWIFGTGLALLFAAMLNVLRLRNGNGVRGLKLFCITANVTMLVFAIALMA
Ga0182018_1064682523300014489PalsaMRILDQLGAGTLFVLAIVDCLLVPRTYTGRIWIFGTGLALLFAAMLNVLRLRNGNGVRGLKLFCITANVTMLVFAIALMA
Ga0182015_1002246513300014495PalsaVRLFDRLCAGTLFILAIVDCLLVPKDYTGRIWFFGTGLALLCTAMLNVLRIRNGRGVKGLKLFCVTADVT
Ga0182015_1036249413300014495PalsaMRAMKLFDWLCAGILFVLAISDCLLVPRAYTGRIWIFGTGLALLFTAMLNLL
Ga0182024_1232920823300014501PermafrostMKLFDRLCAGILFVLAIVDCLLVPKTYTGRIWLLGTALALLFTAMLNVLRLRNGY
Ga0137418_1127624013300015241Vadose Zone SoilMKLFDRLCAGTLFILAIVDCLLVPKTYTGRIWIFGTGLALFFTALLNVLRIRNGRGVRGLKLFCI
Ga0132255_10036347513300015374Arabidopsis RhizosphereLFLLAIVECWLVPRDYTGRIWIFGTGLALLFVAMLNLLRIRNGYSVRGLKMFCIGANVVMTVFVAAL
Ga0163161_1000876983300017792Switchgrass RhizosphereVRHVDRVCAGAFFLLAIVECWLVPPDYTGRIWIFGTGLALLFVAMLNLLRIRNGYSVRGLKMFCIGANVVMTVFVAALM
Ga0187818_1018620323300017823Freshwater SedimentMKFFDLLCAGSLFLLAIAASFLIPKTYTGRIWIYGTDLALLYAAMLNLLRIQNGATVRGL
Ga0187781_1114490613300017972Tropical PeatlandMRIVDHFCASAIFLLALVDCLLVPKDYTGRIWIFGTGLALLFAAMVNMIRIRNPGNVRGLRTSCITANVTMLTFAIAL
Ga0187805_1063422223300018007Freshwater SedimentMRFLDRVCAGMLFLLAIAECLLVPRTYTGRIWIFGTGLAMLFAAMLNLLRIRNGYGVQGLKMF
Ga0187884_1010925413300018009PeatlandVRFFDGICAGTLFLLAIMDCLLVPRTYTGRIWIFGTGLALLFTAMLNVLRIRNARGIQGLRLSCITANISLLAFAIALMASI
Ga0187872_1033572223300018017PeatlandMKLLDWLCAGILFVLAIVSSLLVPRTYTGRIWIFGTCLALLFASMLNLLRIRNG
Ga0187869_1017045413300018030PeatlandVRFFDRTCAGALFLLAIVDCLLVPRTYPGRIWIFGTGLALLFTAMFNVLRIRNARGIQGL
Ga0187887_1005926113300018043PeatlandMEFLDRLCAATLFVAAMANGLVVPRTYAGRIWIFGTCLALLFAAMLNLLRIRNRPAVSGLKLFCFAANVIMLVFGIALMASIGRSRSV
Ga0066667_1060750813300018433Grasslands SoilMKIVDRLCAGTLFVLAIVECLMVPKTYVGRIWILGTDLALLFTAMLNVLRIRNGYVMQGMKMF
Ga0210407_1046433623300020579SoilLRGIDWICAVSLFLFAIVDCLLVPRTYTGRIWIFGTGLALLFTAMLNVLRLRNS
Ga0210407_1050680623300020579SoilMRLFDKLCAEAVFILAIVCCLLVPRTYTGRIWIFGTGLALLFTAMLNLLRLRNGYGVQGLRLFCIAANLTML
Ga0210407_1058028923300020579SoilMKGLDRACGGALFLLAVVECWLVPRDYTGRIWIFGTGLALLFTAMLNLLRVRNGYGVRGLKLFCIRPT
Ga0210399_1143214423300020581SoilVKLFDCICAGVLFILAIVDCLLVPKNYTGRIWIFGTCLALLFTAMLNVLRIRNGRGVKGLKL
Ga0210395_1001013113300020582SoilVKLFDRLCAGILFILAIVDGLLVPKNYTGRIWIFGTCLALLFTAMLNALRIRNGRGAKGLKLFCIAANVTMLVLVIALVASIGKMRTL
Ga0210395_1019517633300020582SoilMKLLDRLCAGTLFLLAIIECLLVPKTYTGRIWILGTYLALLFTAMLNLLRIRNGYAVRGLRMFCIAGNLTMLVFFAALMAS
Ga0210395_1103001413300020582SoilLGLVDRTCAGAIFLLAIADCLLVPRTYTGRIWILGTGLALLFTAMLNVLRIRNGHEVRGLKLFCITANVTMLVFAIAL
Ga0210406_1131025313300021168SoilMRLFDKLCAGALFILAIVYCLLVPRTYNGRIWIFGTGLALLFTAMLNLLRLRNGYGVQGLRLFCITANLTMLVFVI
Ga0210388_1000919813300021181SoilVKLFDCICAGVLFILAIVDCLLVPKNYTGRIWIFGTCLALLFTAMLNVLRIRNGRGVK
Ga0210388_1007684633300021181SoilMKLLDRLCAGTLFILSIVDCLLVPRTYTGRIWIFGTCLALLFAAMLNLLRIR
Ga0210393_1070232723300021401SoilMKLFDRLCAGIIFVLAIVDSLLVQRTYTGRIWIFGTCLALLFTAMLNVLRL
Ga0210397_1143608813300021403SoilMDILDRLCAFALFILAIVDSLLVPRTYTGRIWIFGTCLALLFTAMLN
Ga0210389_1002434953300021404SoilMRMVDRFCAATLFLLAIMDCLLVPRTYTGRIWIFGTGLALLFAAMLNGLRLRNRYAVRGLKLSCVTADVAMLVFAIAIVA
Ga0210383_1019086213300021407SoilMRMVDRFCAATLFLLAIIDCLLVPRTYTGRIWIFGTGLALLFAAMLNGLRLRNRYAVRGLKLSCITADVTLLVFAIAIMASI
Ga0210384_1067359823300021432SoilMKGLDRACGGALFLLAVVECWLVPRDYTGRIWIFGTGLALLFTAMLNLLRVRNGYGVRGLKLFCIAANLMMLVFVIALIASIGWARVM
Ga0210391_1001449183300021433SoilMKLLDRLCAGTLFILSIVDCLLVPRTYTGRIWIFGTCLALLFAAMLNLLRIRNRPGVRGLKLFCVAANVIMLVFGIALMASIGWSR
Ga0210398_1140779013300021477SoilMRMVDRFCAATLFLLAIIDCLLVPRTYTGRIWIFGTGLALLFAAMLNGLRLRNGYAVRGLKLSCVTANVAMLVFAIAIVASI
Ga0210410_1108012423300021479SoilMKFLDRVCAGTLFLLALAACSLVPRTYTGRIWMLGTVLALLFTAMFNLLRIRNGVRVRGLRMFCIASNVALLV
Ga0212123_1072489723300022557Iron-Sulfur Acid SpringMKLLDQLCAGIIFILAIVDCLLVPRTYTGRIWIFGTGLALLFTAMLNLLRIRNGRGVKGLRLFCITANVTMLVFAIALIASIGKSRT
Ga0224567_10525323300022727Plant LitterMKILDRLVAGILFVLAIVDCLLVPRTYTGRIWIFGTGLALLFTAMLNVL
Ga0224571_10831513300022734RhizosphereMKLLDRLCAGTLFLLAIVECLLVPKTYTGRIWILGTYLALLFTAMLNLLRIRNGYAVRGLRM
Ga0228597_11068523300023012Plant LitterMKILDRLVAGILFVLAIVDCLLVPRTYTGRIWIFGTGLALLFTAMLNVLRIRNGGAVKGLRLFCITANVTMLVFAM
Ga0224572_110691323300024225RhizosphereVRFLDQTCAGFLFLLSIADCLLVPRTYTGRIWIFGTALALLFTAMLNILRLRNGRG
Ga0228598_100574013300024227RhizosphereMKLFDQFCAAALFLLAIVDCLLVPRTYTGRIWIFGTGLALLFTAMLNVLRLRNSR
Ga0207701_1116911623300025930Corn, Switchgrass And Miscanthus RhizosphereVRHLDRVFAGALFLLAIVECWLVPRDYTGRIWIFGTGLALLFVAMLNLLRIRNGYSVRGLKMFCIGANVVMTVFVAALMASIG
Ga0207644_1014961413300025931Switchgrass RhizosphereVRHVDRVCAGALFLLAIVECWLVPRDYTGRIWIFGTGLALLFVAMLNLLRIRNGYSVRGLKMFCIGANVVMTVFVAALMASIGGAKTV
Ga0207640_1151811023300025981Corn RhizosphereVRHVDRVCAGALFLLAIVECWLVPRDYTGRIWIFGTGLALLFVAILNLLRIRNGYSVRGLKMFCIG
Ga0207658_1169413923300025986Switchgrass RhizosphereVRHVDRVCAGALFLLAIVECWLVPRDYTGRIWIFGTGLALLFVAMLNLLRIRNGYSVRGL
Ga0257172_105998013300026482SoilMKLFDRLCAGTLFILAIVDCLLVPKTYTGRIWIFGTSLALFFTAMLNVLRIRNGRGVRGLKLFCITANATMLVF
Ga0257168_106111013300026514SoilMTFFDRLCAAVLFILAIVDCLLVPRTYTGRIWIFGTGLALLFTAMLNGLRIRNGQGVGG
Ga0209735_102446533300027562Forest SoilMRLFDKLCAGALFILAIVDCLLVPRTYTGRIWIFGTGLALLFTAMLNLLRLRNGYGVQGLRLFCFAANLTMLVFVIALLASIGKSCTLQ
Ga0209527_113374523300027583Forest SoilMKLFDRLCAGTLFILAIVDCLLVPKTYTGRIWIFGTGLALFFTAMLNVLRIRNRRGVRGLKLFCITAN
Ga0208827_104247413300027641Peatlands SoilMNLLDRACAGTLFLLAIVECLLVPKTYAGRIWLLGTDLALLFVAMLNVLRIRNGYR
Ga0208989_1012483223300027738Forest SoilMTFLDRLGAGMLFVLAIVDCLLVPRTYTGRIWIFGTGLALLFTAMLNVLRIRNGRGVRGLKLSC
Ga0209655_1017650213300027767Bog Forest SoilMKLFDRLCAGVLFILAIADCLLVPKNYTGRIWIFGTCLALLFTAMLNVLRIRNGRAVKGLKLFCLTA
Ga0209274_1045024723300027853SoilMRLFDKLCAGALFILAIVYCLLVPRTYAGRIWIFGTGLALLFTAMLNLLRLGNGCGVQGLRLFCITANLTMLVFVI
Ga0209274_1045505113300027853SoilMKLLDRLCAGTLFLLAIVECLLVPKSYPGRIWILGTYLALLFTAMLNLLRIRNGYAVRGLRMFCIAGNL
Ga0209167_1072683113300027867Surface SoilVKLLDQLCAGILFLVAIVDCLLVPKTYVGRIWIFGTGLALLFTAMFNVLRLRNGLGVRGLKLFCITANAAMFTFTIGLIASIGKSRTLQH
Ga0209169_1025764113300027879SoilMKLLDRLCAGTLFILSIVDCLLVPRTYTGRIWIFGTCLALLFAAMLNLLRIRNRPGVRGLKLFCVA
Ga0209006_1002137513300027908Forest SoilMRLFDKLCAGALFILAIVYCLLVPRTYTGRIWIFGTGLALLFTAMLNLLRL
Ga0209006_1034920533300027908Forest SoilMRLFDKLCAGALFILAIVGCLLVPRTYTGRIWIFGTGLALLFTAMLNLLRL
Ga0209698_1093476723300027911WatershedsMKFFDLLCAGSLFILAIAASFLIPKTYTGRIWIYGTDLAVLYTAMLNLLRIQNGSAVRGL
Ga0209698_1114866723300027911WatershedsVKLFDRLCAGILFVVAIVECLMVPKSYAGRIWIFGTDLALLFTSLLNLLRIRSGYRMPGLKILCITADIVMLIFFLGLMV
Ga0265356_102698913300028017RhizosphereMKLLDRLCAGTLFLLAIVECLLVPKTYTGRIWILGTYLALLFTAMLNLLRIRNGYAVRGLRMFCIAGN
Ga0265355_101394213300028036RhizosphereMKLLDRLCAGTLFLLAIVECLLVPKTYTGRIWIFGTYLALLFTAMLNVLRIR
Ga0209526_1081503913300028047Forest SoilMKLFDRLCAGTLFILAIVDCLLVPKTYTGRIWIFGTGLALFFTAMLNVLRIRNRRGVRGLKLFCITANAT
Ga0268264_1019268913300028381Switchgrass RhizosphereVRHVDRVCAGALFLLAIVECWLVPRDYTGRIWIFGTGLALLFVAMLNLLRIRNGYSVRGLKMFCVGAN
Ga0302224_1002912833300028759PalsaLRFVDRICAGSLFLLAIVNCLLVPRTYTGRIWIFGAGLALLFTAMLNVLRIRNVRG
Ga0308309_1174572523300028906SoilMKFLDRVCAGTLFLLALAACSLVPRTYTGRIWMLGTVLALMFTAMFNLLPIRNGVRVR
Ga0311368_1043645823300029882PalsaMKFFDRLCAGTLFLLAIIECLLVPKTYTGRIWILGTYLALLFTAMLNLLRIRNGNVVQGLKMF
Ga0311371_1000805213300029951PalsaLRFVDRICAGSLFLLAIVNCLLVPRTYTGRIWIFGAGLALLFTAMLNVLRIRNVRGVKGLRLFCVTANVTALVFAIA
Ga0311372_1143922313300030520PalsaMKLFDRVCAGTLFFLAIADCLLVPRTYTGRIWIFGTGLALLFTAMLDVLRIRNGRSVPGLKLSCIAANVA
Ga0265750_109533223300030813SoilMKLLDRLCAGTLFLLAIVECLLVPKTYTGRIWILGTYLALLFTAMLNLLRIRN
Ga0265765_100367633300030879SoilMKLLDRLCGGTLFILAIVDCWLVPRTYTGRIWILGTALALLFTAMLNLLRVRNGYAVRGLKMFCIAAN
Ga0265754_101741313300031040SoilMKLLDRLCAGTLFLLAIVECLLVPKTYTGRIWILGTYLALLFTAMLNLLRIRNGYAVRGLRMFCIAGNL
Ga0310686_10151291923300031708SoilMKFFDLLCAGSLFLLAIAASFLIPKTYTGRIWIFGTDLAVLFAAMLNLLRIQNGSAVRGLKLFCITSNVAMLA
Ga0310686_11574365813300031708SoilMNLFDQFGAAALFVLATVDCMLVPRTYTGRIWILGTGLALLFAGMLNLLRIRNDREVRSLRLFCITANVT
Ga0310686_11901614523300031708SoilMKLLDRLCAGTLFILAIADCWLVPRTYTGRIWILGTALALLFTAMLNSLRIRNGYAMRGLKMSCIAANILMFTFVLALMLSIGKARTLH
Ga0307476_1021704013300031715Hardwood Forest SoilMKLFDWVCAGTLFVLSIADCWLVPKTYTGRIWILGTALALLFTAMLNVLRLRNGY
Ga0307475_1024217813300031754Hardwood Forest SoilLRGIDWICAVSLFLFAIGDCLLVPRTYTGRIWIFGTGLALLFTAMLNVLRLRNS
Ga0307478_1123905823300031823Hardwood Forest SoilMRLFDKLCAEAVFILAIVCCLLVPRTYTGRIWIFGTGLALLFTAMLNLLRLRNGYGVQGL
Ga0311301_1075345333300032160Peatlands SoilMRLFDRVCAGTIFVLAIVGCLLVPRTYMGRIWILGTGLALLFTAMLNLLRIRNGCGVQGLKLFCITA
Ga0311301_1082654713300032160Peatlands SoilMRFFDRLCAGTLFTLAIVDCLLVPKDYTGRIWIFGTGLALLFTAMLNVLRICNGYGVKGLKLFCITANVTMLVFVIALM
Ga0316214_101280113300033545RootsMKLLDRLCAGTLFLLAIVECLLVPKTYTGRIWILGTYLALLFTAMLNLLRIRNGYAVRGLRMFCIAGNLTMLVFFAALMASIGQ

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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