Metagenome Family F058783

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F058783
Family Type	Metagenome
Number of Sequences	134
Average Sequence Length	61 residues
Representative Sequence	MADPPATEGSYEIACPHCSKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGADGEEQEA
Number of Associated Samples	113
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.52 %
% of genes near scaffold ends (potentially truncated)	35.07 %
% of genes from short scaffolds (< 2000 bps)	80.60 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (88.806 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (15.672 % of family members)
Environment Ontology (ENVO)	Unclassified (29.851 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (41.791 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.41% β-sheet: 17.05% Coil/Unstructured: 79.55%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF01545	Cation_efflux	39.55
PF13231	PMT_2	11.19
PF16916	ZT_dimer	7.46
PF04545	Sigma70_r4	2.99
PF10058	zinc_ribbon_10	2.99
PF13424	TPR_12	0.75
PF00437	T2SSE	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	39.55
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	39.55
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	39.55

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.81 %
Unclassified	root	N/A	11.19 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.81 %
Unclassified	root	N/A	11.19 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.81 %
Unclassified	root	N/A	11.19 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	85.07 %
Unclassified	root	N/A	11.19 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	83.58 %
Unclassified	root	N/A	11.19 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.49 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	78.36 %
Unclassified	root	N/A	11.19 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.49 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	78.36 %
Unclassified	root	N/A	11.19 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.49 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	78.36 %
Unclassified	root	N/A	11.19 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.49 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_102243451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2448	Open in IMG/M
3300000956\|JGI10216J12902_120912650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	865	Open in IMG/M
3300001305\|C688J14111_10117256	Not Available	813	Open in IMG/M
3300001686\|C688J18823_10163643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1520	Open in IMG/M
3300002568\|C688J35102_119151066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	646	Open in IMG/M
3300002568\|C688J35102_120391167	Not Available	1034	Open in IMG/M
3300002568\|C688J35102_120889334	Not Available	2048	Open in IMG/M
3300003267\|soilL1_10001372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4046	Open in IMG/M
3300003267\|soilL1_10069899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1540	Open in IMG/M
3300003320\|rootH2_10119051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2661	Open in IMG/M
3300003987\|Ga0055471_10166509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	678	Open in IMG/M
3300003993\|Ga0055468_10013356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1650	Open in IMG/M
3300004013\|Ga0055465_10277535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	571	Open in IMG/M
3300004081\|Ga0063454_100041179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1743	Open in IMG/M
3300004114\|Ga0062593_100031814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3016	Open in IMG/M
3300004114\|Ga0062593_100050826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2582	Open in IMG/M
3300004114\|Ga0062593_100134187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1838	Open in IMG/M
3300004153\|Ga0063455_100434205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	789	Open in IMG/M
3300004156\|Ga0062589_102271316	Not Available	557	Open in IMG/M
3300004157\|Ga0062590_100055672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2231	Open in IMG/M
3300004463\|Ga0063356_100329550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1914	Open in IMG/M
3300004479\|Ga0062595_100013710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2793	Open in IMG/M
3300004479\|Ga0062595_100253709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1143	Open in IMG/M
3300004479\|Ga0062595_100806300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	774	Open in IMG/M
3300005093\|Ga0062594_100008887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3463	Open in IMG/M
3300005093\|Ga0062594_100914064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	831	Open in IMG/M
3300005093\|Ga0062594_101129249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	769	Open in IMG/M
3300005280\|Ga0065696_1331915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	523	Open in IMG/M
3300005294\|Ga0065705_10104724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	11696	Open in IMG/M
3300005294\|Ga0065705_10429934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	848	Open in IMG/M
3300005327\|Ga0070658_11001659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	727	Open in IMG/M
3300005328\|Ga0070676_10287470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1110	Open in IMG/M
3300005328\|Ga0070676_11228550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	570	Open in IMG/M
3300005330\|Ga0070690_100674069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	792	Open in IMG/M
3300005332\|Ga0066388_100503434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1847	Open in IMG/M
3300005336\|Ga0070680_100414023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1150	Open in IMG/M
3300005340\|Ga0070689_102083879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300005343\|Ga0070687_100785461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	673	Open in IMG/M
3300005345\|Ga0070692_10163645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1277	Open in IMG/M
3300005345\|Ga0070692_10519661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	775	Open in IMG/M
3300005355\|Ga0070671_101134170	Not Available	687	Open in IMG/M
3300005356\|Ga0070674_100085797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2260	Open in IMG/M
3300005365\|Ga0070688_100557807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	872	Open in IMG/M
3300005438\|Ga0070701_10029980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2688	Open in IMG/M
3300005459\|Ga0068867_101933992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	557	Open in IMG/M
3300005546\|Ga0070696_100882469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	741	Open in IMG/M
3300005564\|Ga0070664_100559466	All Organisms → cellular organisms → Bacteria	1058	Open in IMG/M
3300005577\|Ga0068857_100747144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	932	Open in IMG/M
3300005577\|Ga0068857_101622852	Not Available	631	Open in IMG/M
3300005614\|Ga0068856_100472628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1274	Open in IMG/M
3300005719\|Ga0068861_102418841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	528	Open in IMG/M
3300005840\|Ga0068870_10255364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1088	Open in IMG/M
3300006844\|Ga0075428_100368646	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1540	Open in IMG/M
3300006881\|Ga0068865_101080726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	706	Open in IMG/M
3300009101\|Ga0105247_11073252	Not Available	633	Open in IMG/M
3300009148\|Ga0105243_11003777	Not Available	837	Open in IMG/M
3300009789\|Ga0126307_10000166	All Organisms → cellular organisms → Bacteria	40812	Open in IMG/M
3300010037\|Ga0126304_10222279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1238	Open in IMG/M
3300010038\|Ga0126315_10528687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	755	Open in IMG/M
3300010041\|Ga0126312_10258432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1224	Open in IMG/M
3300010044\|Ga0126310_10551959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	851	Open in IMG/M
3300010362\|Ga0126377_10552245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1190	Open in IMG/M
3300010371\|Ga0134125_11962694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	636	Open in IMG/M
3300010399\|Ga0134127_11494035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	748	Open in IMG/M
3300010401\|Ga0134121_10386914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1260	Open in IMG/M
3300012212\|Ga0150985_101563157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	538	Open in IMG/M
3300012212\|Ga0150985_110423074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	545	Open in IMG/M
3300012897\|Ga0157285_10029004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1234	Open in IMG/M
3300012899\|Ga0157299_10042828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	981	Open in IMG/M
3300012916\|Ga0157310_10482413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	535	Open in IMG/M
3300014301\|Ga0075323_1091034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	645	Open in IMG/M
3300014326\|Ga0157380_10408034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1291	Open in IMG/M
3300014745\|Ga0157377_10052311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2305	Open in IMG/M
3300014969\|Ga0157376_11679511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	670	Open in IMG/M
3300015200\|Ga0173480_10066200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1667	Open in IMG/M
3300015371\|Ga0132258_12764689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1223	Open in IMG/M
3300015372\|Ga0132256_100426018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1431	Open in IMG/M
3300017657\|Ga0134074_1159620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	790	Open in IMG/M
3300017792\|Ga0163161_11328645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	626	Open in IMG/M
3300017965\|Ga0190266_10001203	All Organisms → cellular organisms → Bacteria	4731	Open in IMG/M
3300018051\|Ga0184620_10114153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	845	Open in IMG/M
3300018066\|Ga0184617_1053477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1034	Open in IMG/M
3300018465\|Ga0190269_11206096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	595	Open in IMG/M
3300018466\|Ga0190268_12152818	Not Available	519	Open in IMG/M
3300018469\|Ga0190270_10671607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1022	Open in IMG/M
3300019356\|Ga0173481_10029681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1742	Open in IMG/M
3300019362\|Ga0173479_10080955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1154	Open in IMG/M
3300019869\|Ga0193705_1033186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1106	Open in IMG/M
3300021078\|Ga0210381_10015579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1936	Open in IMG/M
3300022756\|Ga0222622_10103862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1753	Open in IMG/M
3300022883\|Ga0247786_1001044	All Organisms → cellular organisms → Bacteria	5062	Open in IMG/M
3300022886\|Ga0247746_1212902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	510	Open in IMG/M
3300025901\|Ga0207688_10054988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2234	Open in IMG/M
3300025901\|Ga0207688_10402981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	848	Open in IMG/M
3300025908\|Ga0207643_10105342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1657	Open in IMG/M
3300025918\|Ga0207662_10735236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	693	Open in IMG/M
3300025920\|Ga0207649_10846505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	715	Open in IMG/M
3300025923\|Ga0207681_10372652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1148	Open in IMG/M
3300025925\|Ga0207650_10112336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2111	Open in IMG/M
3300025932\|Ga0207690_10491625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	991	Open in IMG/M
3300025944\|Ga0207661_10286489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1473	Open in IMG/M
3300025961\|Ga0207712_10550710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	992	Open in IMG/M
3300026095\|Ga0207676_11365944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	704	Open in IMG/M
3300026118\|Ga0207675_101143151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	799	Open in IMG/M
3300027717\|Ga0209998_10091961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	744	Open in IMG/M
3300027821\|Ga0209811_10162090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	834	Open in IMG/M
3300027907\|Ga0207428_10099149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2253	Open in IMG/M
3300028597\|Ga0247820_11017009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	592	Open in IMG/M
3300028708\|Ga0307295_10035901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1253	Open in IMG/M
3300028719\|Ga0307301_10034281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1532	Open in IMG/M
3300028720\|Ga0307317_10095947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	980	Open in IMG/M
3300028720\|Ga0307317_10198221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	677	Open in IMG/M
3300028754\|Ga0307297_10043059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1371	Open in IMG/M
3300028796\|Ga0307287_10136787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	930	Open in IMG/M
3300028799\|Ga0307284_10111412	Not Available	1032	Open in IMG/M
3300028819\|Ga0307296_10321438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	844	Open in IMG/M
3300028876\|Ga0307286_10009543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2978	Open in IMG/M
3300028889\|Ga0247827_10835667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	613	Open in IMG/M
3300031548\|Ga0307408_100858296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	828	Open in IMG/M
3300031731\|Ga0307405_10401410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1073	Open in IMG/M
3300031731\|Ga0307405_10471057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1000	Open in IMG/M
3300031731\|Ga0307405_11361261	Not Available	619	Open in IMG/M
3300031852\|Ga0307410_10262179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1348	Open in IMG/M
3300031903\|Ga0307407_10004346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5997	Open in IMG/M
3300031911\|Ga0307412_10036422	All Organisms → cellular organisms → Bacteria	3152	Open in IMG/M
3300031911\|Ga0307412_10788116	Not Available	824	Open in IMG/M
3300031938\|Ga0308175_100057615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3395	Open in IMG/M
3300031996\|Ga0308176_10096260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2584	Open in IMG/M
3300032075\|Ga0310890_11034495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	662	Open in IMG/M
3300033412\|Ga0310810_11473585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	509	Open in IMG/M
3300033551\|Ga0247830_10819364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	741	Open in IMG/M
3300033551\|Ga0247830_11391927	Not Available	561	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	64.93%
Host-Associated	Host-Associated	35.07%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	59.70%
Plants	Host-Associated → Plants	35.07%
Aquatic	Environmental → Aquatic	5.22%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	59.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.15%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.18%
Marine	Environmental → Aquatic → Marine	2.24%
Sediment	Environmental → Aquatic → Sediment	2.24%
Freshwater	Environmental → Aquatic → Freshwater	0.75%
Rhizome	Host-Associated → Plants → Rhizome	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.03%
Loam	Environmental → Terrestrial → Soil → Loam	14.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.94%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.19%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.21%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.99%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.24%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.24%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.75%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.75%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.37%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.94%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	11.19%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.19%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.21%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.97%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	5.22%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.99%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.24%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.24%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.49%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.75%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.75%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	8.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	5.97%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	5.22%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	4.48%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	3.73%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.99%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.24%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.24%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.24%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.24%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.24%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.24%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.49%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.49%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.49%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.49%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.49%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.49%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.49%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.49%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.49%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.49%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.75%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.75%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.75%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.75%
Switchgrass Rhizosphere Bulk Soil	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere Bulk Soil	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.75%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003320	Sugarcane root Sample H2	Host-Associated	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental	Open in IMG/M
3300004013	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005280	Switchgrass rhizosphere microbial community from Michigan, USA - East Lansing bulk soil	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300014301	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300022883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4	Environmental	Open in IMG/M
3300022886	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S079-202R-5	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027717	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1022434512	3300000956	Soil	MADIPAEEGSYELVCPHCGKSFEAELLTGGSDRHAGFKCPHCRLFVAFERAGVDDEEQEAT*
JGI10216J12902_1209126502	3300000956	Soil	MADTVPEHRAYEIVCPHCSKPFTAELMSGGAERNTGFKCPHCRLFVAFDRATIEGDEDEAS*
C688J14111_101172561	3300001305	Soil	MTEAPPAEGSYELICPHCHKPFEADLMTGGSDRHAGVKCPHCRLFIAYERAAVEDDDGKTA*
C688J18823_101636432	3300001686	Soil	DPPATEGSYEIVCPHCSKTFEAELMTGDSDRHVGFKCPHCRLFVAYERSGADGESEAP*
C688J35102_1191510661	3300002568	Soil	GSYEIVCPHCSKTFEAELMTGDSDRHVGFKCPHCRLFVAYERSGADGESEAP*
C688J35102_1203911672	3300002568	Soil	MTEAPPAEGSYELICPHCHKPFEADLMTGGSDRHAGFKCPHCRLFIAYERAAVEDDDGKTA*
C688J35102_1208893341	3300002568	Soil	MTEAPPAEGSYEMVCPHCHKPFEADLMTGGSDRHAGFKCPHCRLFIAYERAAVENEDGDSA*
soilL1_100013722	3300003267	Sugarcane Root And Bulk Soil	MADAQAKEGSYEILCPHCSKPFEAELMTGGSDRHAGFKCPHCRLFVAFERSGADGEDEQAP*
soilL1_100698992	3300003267	Sugarcane Root And Bulk Soil	MADGSPREGSYELVCPHCHKPFEADLMTGGSDRHAGFKCPHCRLFIAYERATIEEEEPQTS*
rootH2_101190512	3300003320	Sugarcane Root And Bulk Soil	MADGQAKEGSYEILCPHCSKPFEAELMTGGSDRHAGFKCPHCRLFVAFERSGADGEDEQAP*
Ga0055471_101665092	3300003987	Natural And Restored Wetlands	PWGMGDPPATESSYELVCPHCNKPFEAEPLTGGSDRHVGFKCPHCRLFVAFERAGLDGEETEPS*
Ga0055468_100133562	3300003993	Natural And Restored Wetlands	MGDPPATESSYELVCPHCNKPFEAEPLTGGSDRHVGFKCPHCRLFVAFERAGLDGEETEPS*
Ga0055465_102775352	3300004013	Natural And Restored Wetlands	MADPPATEGSYEIACPHCSKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGADGEEQEA
Ga0063454_1000411792	3300004081	Soil	MADPPATEGSYEIVCPHCSKTFEAELMTGDSDRHVGFKCPHCRLFVAYERSGADGESEAP
Ga0062593_1000318142	3300004114	Soil	MADAPAVEGSYEIVCPHCSKPFEAELMTGGSDRHVGFKCPHCRLFVAYERAGVEGEEQEAP*
Ga0062593_1000508262	3300004114	Soil	MADTVPEERAYELVCPHCNKPFEAELLTGGSERTTGFKCPHCRLFVAYERVSTENDETEAT*
Ga0062593_1001341872	3300004114	Soil	MADAQAKEGSYELVCPHCSKPFEAELMTGGSDRHVGFKCPHCRLFVAYERSGADGEEDQAQRS*
Ga0063455_1004342051	3300004153	Soil	TEGSYEIVCPHCSKTFEAELMTGDSDRHVGFKCPHCRLFVAYERSGADGESEAP*
Ga0062589_1022713161	3300004156	Soil	MADPPAVEGSYEIVCPHCSKPFEAELMTGGSDRHVGFKCPHCRLFVAYERAGVEGEEQEAP*
Ga0062590_1000556722	3300004157	Soil	MADAQAKEGSYELVCPHCSKPFEAELMTGGSDRHVGFKCPHCRLFVAYERSGADGEEEQAQRS*
Ga0063356_1003295502	3300004463	Arabidopsis Thaliana Rhizosphere	MADVPAEEGSYELVCPHCGKPFEAELLTGGSDRHAGFKCPHCRLFVAFERAGVDDEDKEAT*
Ga0062595_1000137102	3300004479	Soil	MADAPATEGSYEVACPHCNKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGADGEEPEAS*
Ga0062595_1002537091	3300004479	Soil	MADAPPADSSYKLVCPHCQKPFEAELMTGGSDRHAGFKCPHCRLFVAYER
Ga0062595_1008063002	3300004479	Soil	MADTVPEERAYELVCPHCNKPFEAELLTGGSERTTGFKCPHCRLFVAYERTGDTGRS*
Ga0062594_1000088872	3300005093	Soil	MADEPVAEGPFELVCPHCGKSFEAELLTGGSDRHAGFKCPHCRLFVAYDRVSVDGEEQEAS*
Ga0062594_1009140642	3300005093	Soil	TCGERSPPRGYPLAMADAPASEGSYEIVCPHCSKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGADGEEQEAP*
Ga0062594_1011292492	3300005093	Soil	MADVPVEEGSYELVCPHCGKSFEAELLTGGSDRHAGFKCPHCRLFVAFERAGVDDEDQEAT*
Ga0065696_13319152	3300005280	Switchgrass Rhizosphere Bulk Soil	VEPPAEGVHQVVCPHCKKPFEAELLTGGSERHVGFKCPHCRLFVAYERVQVDEAEGPEDSG*
Ga0065705_101047242	3300005294	Switchgrass Rhizosphere	MADPPAAEGSYEIACPHCSKTFEAELMTGGSDRHVGFKCPHCRLFIAYERSGVDGEEQEAP*
Ga0065705_104299342	3300005294	Switchgrass Rhizosphere	MADVPAEEGSYELVCPHCGKPFEAELLTGGSDRHAGFKCPHCRLFVAFERAGVDDEDQEAT*
Ga0070658_110016591	3300005327	Corn Rhizosphere	MADAQAAEGSYEVTCPHCHKPFEADLMTGGSDRHAGFKCPHCRLFVAYERSGADSEEEEAP*
Ga0070676_102874701	3300005328	Miscanthus Rhizosphere	MADAPATEGSYEVACPHCNKTFEAELMTGGSDRHVGFKCPHCRLFVAYDRSGADGEEPEAS*
Ga0070676_112285502	3300005328	Miscanthus Rhizosphere	RGYPSAMADAQAKEGSYELVCPHCSKPFEAELMTGGSDRHVGFKCPHCRLFVAYERSGADGEEDQAQRS*
Ga0070690_1006740692	3300005330	Switchgrass Rhizosphere	MADAPATEGSYEVACPHCNKTFEAELMTGGSDRHVGFKCPHCRLFVAYER
Ga0066388_1005034342	3300005332	Tropical Forest Soil	MADAPAQDGSYDLECPHCGKSFEAELLTGESDRHAGFKCPHCRLFVAYDRARVDGEEQESS*
Ga0070680_1004140231	3300005336	Corn Rhizosphere	STMADAQAAEGSYEVTCPHCHMPFEADLMTGGSDRHAGFKCPHCRLFVAYERSGADSEEEEAP*
Ga0070689_1020838792	3300005340	Switchgrass Rhizosphere	MADAPATEGSYEVACPHCNKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGAGGEEPEAS*
Ga0070687_1007854612	3300005343	Switchgrass Rhizosphere	MADDPVAEGPFELVCPHCGKSFEAELLTGGSDRHAGFKCPHCRLFVAYDRVSVDGEEQEAS*
Ga0070692_101636452	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	GERSPPRGYPLAMADAPATEGSYEIACPHCSKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGADGEEPEAS*
Ga0070692_105196612	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MADAPASEGSYEIVCPHCSKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGADGEEQEAP*
Ga0070671_1011341702	3300005355	Switchgrass Rhizosphere	MADPPATEGSYEVACPHCNKTFEAELMTGGSDRHVGFKCPHCRLFVAYER
Ga0070674_1000857971	3300005356	Miscanthus Rhizosphere	PVAEGPFELVCPHCGKSFEAELLTGGSDRHAGFKCPHCRLFVAYDRVSVDGEEQEAS*
Ga0070688_1005578071	3300005365	Switchgrass Rhizosphere	PATEGSYEVACPHCNKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGAGGEEPEAS*
Ga0070701_100299802	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MADAPATEGSYEIACPHCSKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGAGGEEPEAS*
Ga0068867_1019339921	3300005459	Miscanthus Rhizosphere	AMADAPATEGSYEVACPHCNKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGAGGEEPEAS*
Ga0070686_1003446691	3300005544	Switchgrass Rhizosphere	MADAPATEGSYEVACPHCNKTFEAELMTGGSDRHVGFKCPHCRLFVAY
Ga0070696_1008824692	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	APEGSYEIACPHCSKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGADGEEQEAP*
Ga0070664_1005594662	3300005564	Corn Rhizosphere	MADAQAAEGSYEVTCPHCLKPFEAELMTGGSDRHAGFKCPHCRLFVAYERSGADSEEEEAP*
Ga0068857_1007471442	3300005577	Corn Rhizosphere	GSYEVACPHCNKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGADGEEPEAS*
Ga0068857_1016228521	3300005577	Corn Rhizosphere	MADAPASEGSYEIVCPHCSKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGADGEEPEA
Ga0068856_1004726281	3300005614	Corn Rhizosphere	TCGERSPPRGYPLAMADAPATEGSYEVACPHCNKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGAGGEEPEAS*
Ga0068861_1024188412	3300005719	Switchgrass Rhizosphere	YPLAMADPPATEGSYEVACPHCNKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGADGEEPEAS*
Ga0068870_102553642	3300005840	Miscanthus Rhizosphere	MADAPATEGSYEIACPHCSKTFEAELMTGGSDRHVGFKCPHCRLFVAYDRSGADGEEPEAS*
Ga0075428_1003686462	3300006844	Populus Rhizosphere	MADPPAAEGSYEIACPHCNKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGVDGEEQEGS*
Ga0068865_1010807262	3300006881	Miscanthus Rhizosphere	GERSPPRGYPLAMADPPAPEGSYEIACPHCSKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGADGEEQEAP*
Ga0105247_110732522	3300009101	Switchgrass Rhizosphere	MADAPATEGSYEVACPHCNKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGAGG
Ga0105243_110037772	3300009148	Miscanthus Rhizosphere	LAVADAPATEGSYEVACPHCNKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGAGGEEPEAS*
Ga0126307_1000016630	3300009789	Serpentine Soil	MADGPATEGSYEIACPHCSKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGADGEEPEAS*
Ga0126304_102222792	3300010037	Serpentine Soil	MADGPATEGSYEIACPHSIKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGADGEEPEAS*
Ga0126315_105286871	3300010038	Serpentine Soil	PLAMADAPATEGSYEIVCPHCSKTFEAELMTGESERHVGFKCPHCRLFVAYERSGADGEEPEAS*
Ga0126312_102584322	3300010041	Serpentine Soil	MANPPATEGSYEIVCPHCSKTFEAELMTGGSDRHVGFKCPHCRLFVAYERTGLDGEEPEAS*
Ga0126310_105519592	3300010044	Serpentine Soil	MADAPATEGSYEIVCPHCSKTFEAELMTGESERHVGFKCPHCRLFVAYERSGADGEEPEAS*
Ga0126377_105522452	3300010362	Tropical Forest Soil	MADAPAQDGSYDLECPHCGKSFEAELLTGESDRHAGFKCPHCRLFVAYDRASVDGEEQESS*
Ga0134125_119626941	3300010371	Terrestrial Soil	MADAQAAEGSYEVTCPHCHKPFEADLMTGGSDRHAGFKCPHCRLFVAYERSGADSGEEEAP*
Ga0134127_114940351	3300010399	Terrestrial Soil	MAEAPAAEGSYEIVCPHCSKPFEAELMTGGSDRHAGFKCPHCRLFVAFERSGADGEEQETP*
Ga0134121_103869142	3300010401	Terrestrial Soil	MADPPATEGSYEVACPHCNKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGADGEEPEAS*
Ga0150985_1015631572	3300012212	Avena Fatua Rhizosphere	EIVCPHCSKTFEAELMTGDSDRHVGFKCPHCRLFVAYERSGADDGKPEGP*
Ga0150985_1104230741	3300012212	Avena Fatua Rhizosphere	APPAEGSYELICPHCHKPFEADLMTGGSDRHAGFKCPHCRLFIAYERAAVEDDDGKTA*
Ga0157285_100290042	3300012897	Soil	MADAPASEGSYEIVCPHCSKTFEAELMTGGTDRHVGFKCPHCRLFVAYERSGADGEEQEAP*
Ga0157299_100428282	3300012899	Soil	MADPPAAEGSYEIACPHCNKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGADGEEPEALRFKPPRP*
Ga0157310_104824132	3300012916	Soil	MADAQAKEGSYELVCPHCSKPFEAELMTGGSDRHVGFKCPHCRLFVAYERSGADGEEQGAS*
Ga0075323_10910342	3300014301	Natural And Restored Wetlands	MGDPPATESSYELVCPHCNKPFEAEPLTGGSDRHVGFKCPHCRLFVAFERAGLDGEEPEAS*
Ga0157380_104080342	3300014326	Switchgrass Rhizosphere	AMADAPATEGSYEIACPHCSKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGADGEEPEAS*
Ga0157377_100523112	3300014745	Miscanthus Rhizosphere	MADAPATEGSYEIACPHCSKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGADGEEPEAS*
Ga0157376_116795111	3300014969	Miscanthus Rhizosphere	RGYPLAMADAPATEGSYEVACPHCNKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGADGEEPEAS*
Ga0173480_100662002	3300015200	Soil	MADPQAAEGSYEVICPHCSKPFEAELMTGGSDRHVGFKCPHCRLFVAYERSGADGEEDQAQRS*
Ga0132258_127646892	3300015371	Arabidopsis Rhizosphere	MADAVPENRTYELVCPHCKKRFEADLLTGGSDRHTGFKCPHCRLFVAFERASIEDDQAESA*
Ga0132256_1004260182	3300015372	Arabidopsis Rhizosphere	MADAPATEGSYEVACPHCNKTFEAELMTGGSDRHVGFKCPYCRLFVAYERSGAGGEEPEAS*
Ga0134074_11596202	3300017657	Grasslands Soil	MADAPPDDRTYELVCPHCKKHFEAELLTGGSDRHTGFKCPHCRLFVAFERAGIEGDRADD
Ga0163161_113286452	3300017792	Switchgrass Rhizosphere	AGATCGERSPPRGYPLAMADPPATEGSYEVACPHCNKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGAGGEEPEAS
Ga0190266_100012034	3300017965	Soil	MADPPAAEGSYEIACPHCSKTFEAELMTGGSDRHVGFKCPHCRLFIAYERSGVDGEEQEA
Ga0184620_101141532	3300018051	Groundwater Sediment	ERSPPRGYPLAMADPPAPEGSYEIACPHCSKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGADGEEQEAP
Ga0184617_10534771	3300018066	Groundwater Sediment	MADPRAPEGSYEIACPHCSKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGVDGKEQEA
Ga0190269_112060962	3300018465	Soil	MADAPASEGSYEIVCPHCSKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGADGEEQEA
Ga0190268_121528181	3300018466	Soil	MADPPAAEGSYEIACPHCSKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGADGE
Ga0190270_106716072	3300018469	Soil	MADPPATEGSYEIACPHCSKTFEAELMTGGSDRHVGFKCPHCRLFVAYERAGVDGEEPAT
Ga0173481_100296811	3300019356	Soil	ERSDAGATCGERSPPRGYPLAMADAPASEGSYEIVCPHCSKTFEAELMTGGTDRHVGFKCPHCRLFVAYERSGADGEEQEAP
Ga0173479_100809552	3300019362	Soil	MADAPAVEGSYEIVCPHCSKPFEAELMTGGSDRHVGFKCPHCRLFVAYERAGVEGEEQEA
Ga0193705_10331862	3300019869	Soil	MADPPAPEGSYEIACPHCSKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGADGEEQEA
Ga0210381_100155793	3300021078	Groundwater Sediment	MADPPAPEGSYEIACPHCSKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGAD
Ga0222622_101038622	3300022756	Groundwater Sediment	MADPPAPEGSYEIACPHCNKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGVDGEEQEA
Ga0247786_10010442	3300022883	Soil	MADAPASEGSYEIVCPHCSKTFEAELMTGGTDRHVGFKCPHCRLFVAYERSGADGEEQEA
Ga0247746_12129022	3300022886	Soil	SEGSYEIVCPHCSKTFEAELMTGGTDRHVGFKCPHCRLFVAYERSGADGEEQEAP
Ga0207688_100549883	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MADAPATEGSYEVACPHCNKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGADGEEPEA
Ga0207688_104029812	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MADAQAAEGSYEVTCPHCHKPFEADLMTGGSDRHAGFKCPHCRLFVAYERSGADSEEEEA
Ga0207643_101053422	3300025908	Miscanthus Rhizosphere	MADAPATEGSYEIACPHCSKTFEAELMTGGSDRHVGFKCPHCRLFVAYDRSGADGEEPEA
Ga0207662_107352362	3300025918	Switchgrass Rhizosphere	MADDPVAEGPFELVCPHCGKSFEAELLTGGSDRHAGFKCPHCRLFVAYDRVSVDGEEQEA
Ga0207649_108465052	3300025920	Corn Rhizosphere	MADAPATEGSYEVACPHCNKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGAGGEEPEA
Ga0207681_103726522	3300025923	Switchgrass Rhizosphere	MADAPATEGSYEVACPHCNKTFEAELMTGGSDRHVGFKCPHCRLFVAYDRSGADGEEPEA
Ga0207650_101123362	3300025925	Switchgrass Rhizosphere	MADAPATEGSYEIACPHCSKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGADGEEPEA
Ga0207690_104916252	3300025932	Corn Rhizosphere	SYEVACPHCNKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGADGEEPEAS
Ga0207661_102864892	3300025944	Corn Rhizosphere	MADAQAKEGSYELVCPHCSKPFEAELMTGGSDRHVGFKCPHCRLFVAYERSGADGEEDQAQRS
Ga0207712_105507101	3300025961	Switchgrass Rhizosphere	MADEPVAEGPFELVCPHCGKSFEAELLTGGSDRHAGFKCPHCRLFVAYDRVSVDGEEQEA
Ga0207676_113659442	3300026095	Switchgrass Rhizosphere	PATEGSYEVACPHCNKTFEAELMTGGSDRHVGFKCPHCRLFVAYDRSGADGEEPEAS
Ga0207675_1011431512	3300026118	Switchgrass Rhizosphere	MADPPATEGSYEVACPHCNKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGADGEEPEA
Ga0209998_100919612	3300027717	Arabidopsis Thaliana Rhizosphere	VAERYEVVCPHCSKTFEAELLEAPSGSAPRGFKCPHCRLFVAYERSGADSEEEEAP
Ga0209811_101620902	3300027821	Surface Soil	MADPPAPEGSYEIACPHCNKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGADGEEQEA
Ga0207428_100991492	3300027907	Populus Rhizosphere	MADPPAAEGSYEIACPHCNKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGVDGEEQEG
Ga0247818_108322771	3300028589	Soil	MADPPAAEGSYEIACPHCNKTFEAELMTGGSDRHVGFKCPHCRLFVAYE
Ga0247820_110170092	3300028597	Soil	MADPPAPEGSYEIACPHCNKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGVDGEEQEG
Ga0307295_100359012	3300028708	Soil	MADPPAPEGSYEIACPHCSKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGVDGEEQEA
Ga0307301_100342812	3300028719	Soil	MADPRAPEGSYEIVCPHCSKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGIDGEEQEA
Ga0307317_100959471	3300028720	Soil	ERSDAGATCEERSPPRGYPLAMADPPAPQGSYEIACPHCNKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGVDGEEQEAP
Ga0307317_101982212	3300028720	Soil	GSYEIACPHCSKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGADGEEQEAP
Ga0307297_100430591	3300028754	Soil	AMADPPAPEGSYEIACPHCSKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGADGEEQEAP
Ga0307287_101367871	3300028796	Soil	EGSYEIACPHCNKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGVDGEEQEAP
Ga0307284_101114122	3300028799	Soil	MADAPPADSSYELVCPHCHKPFEAELMTGGSDRHAGFKCPHCRLFVAYERASLEDDEPQT
Ga0307296_103214382	3300028819	Soil	PPAPEGSYEIACPHCNKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGVDGEEQEAP
Ga0307286_100095432	3300028876	Soil	MADAPPADSSYELVCPNCRKPFEAELMTGGSDRHAGFKCPHCRLFVAYERASLEDDEPQT
Ga0247827_108356671	3300028889	Soil	SYEIACPHCNKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGVDGEEQEGS
Ga0307408_1008582962	3300031548	Rhizosphere	MADPPATEGSYEIACPHCNKTFEAELMTGGSERHVGFKCPHCRLFVAYERSGADGEEQEA
Ga0307405_104014102	3300031731	Rhizosphere	PPRGYPLAMADPPAAEGSYEIACPHCNKTFEAELMTGGSERHVGFKCPHCRLFVAYERSGVDGEEQEAP
Ga0307405_104710571	3300031731	Rhizosphere	PATEGSYEIACPHCSKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGADGEEQEAS
Ga0307405_113612611	3300031731	Rhizosphere	MADGPATEGSYEIACPHCSKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGADGEDQEA
Ga0307410_102621791	3300031852	Rhizosphere	MADPPATEGSYEIACPHCSKTFEAELMTGGSDRHVGFKCPHCRLFVAYERAGVDGEEQEA
Ga0307407_100043465	3300031903	Rhizosphere	MADGPATEGSYEIACPHCSKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGADGEEQEA
Ga0307412_100364221	3300031911	Rhizosphere	CGERSPPRGYPLAMADGPATEGSYEIACPHCSKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGADGEEQEAS
Ga0307412_107881162	3300031911	Rhizosphere	MADPPATEGSYEIACPHCNKTFEAELMTGGSERHVGFKCPHCRLFVAYERSGVDGEEQEA
Ga0308175_1000576152	3300031938	Soil	MADPPATEGSYEIVCPHCSKTFEAELMTGDSDRHVGFKCPHCRLFVAYDRSGADGEEPKT
Ga0308176_100962602	3300031996	Soil	MADPPATEGSYEIVCPHCSKTFEAELMTGDSDRHVGFKCPHCRLFVAYDRSGAAGEEPET
Ga0310890_110344951	3300032075	Soil	APRTPRRERSDAGATCGERSPPRGYPLAMADPPAAEGSYEIACPHCNKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGVDGEEQEGS
Ga0310810_114735851	3300033412	Soil	MADAPALEGSYEMVCPHCSKPFEAELMTGGSDRHVGFKCPHCRLFVAYERAGIDGEKQEA
Ga0247830_108193641	3300033551	Soil	RERFDAGATCGDRSPPRGYPLAMADPPAAEGSYEIACPHCNKTFEAELMTGGSDRHVGFKCPHCRLFVAYERSGVDGEEQEGS
Ga0247830_113919272	3300033551	Soil	MADDPAAEGPYELVCPHCGKSFEAELLTGGSDRHAGFKCPHCRLFVAYNRAGGDSDEQEA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F058783

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences