Metagenome Family F058780

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F058780
Family Type	Metagenome
Number of Sequences	134
Average Sequence Length	101 residues
Representative Sequence	MFNNFNGINASNDILPKQFLNYIDYELSCFEKITNKKFFFNLLKNDKFELNVYESKEDNNKSKYQIIYRANNLYQFIKRLLMIREYLIKHFDNNRTKTIIL
Number of Associated Samples	108
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	12.03 %
% of genes near scaffold ends (potentially truncated)	32.09 %
% of genes from short scaffolds (< 2000 bps)	79.85 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (69.403 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (16.418 % of family members)
Environment Ontology (ENVO)	Unclassified (22.388 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (33.582 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 34.88% β-sheet: 16.28% Coil/Unstructured: 48.84%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF00920	ILVD_EDD	7.46
PF08461	HTH_12	2.24
PF13847	Methyltransf_31	1.49
PF00230	MIP	1.49
PF11376	DUF3179	1.49
PF13185	GAF_2	1.49
PF01230	HIT	0.75
PF13577	SnoaL_4	0.75
PF11387	DUF2795	0.75
PF13238	AAA_18	0.75
PF06863	DUF1254	0.75
PF08241	Methyltransf_11	0.75
PF12838	Fer4_7	0.75
PF01638	HxlR	0.75
PF00211	Guanylate_cyc	0.75
PF13385	Laminin_G_3	0.75
PF06742	DUF1214	0.75
PF14520	HHH_5	0.75
PF00072	Response_reg	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG0129	Dihydroxyacid dehydratase/phosphogluconate dehydratase	Carbohydrate transport and metabolism [G]	14.93
COG0580	Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)	Carbohydrate transport and metabolism [G]	1.49
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	1.49
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.75
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.75
COG5402	Uncharacterized protein, contains DUF1214 domain	Function unknown [S]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.40 %
All Organisms	root	All Organisms	30.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.40 %
cellular organisms	root	All Organisms → cellular organisms	29.85 %
Viruses	superkingdom	All Organisms → Viruses	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.40 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	26.87 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.99 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.40 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	20.15 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	1.49 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	1.49 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.40 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	19.40 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.49 %
Spirochaetia	class	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia	1.49 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.40 %
Nitrososphaeria	class	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria	14.93 %
Nitrosopumilales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	2.24 %
Spirochaetales	order	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales	1.49 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.49 %
unclassified Thaumarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota	0.75 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.40 %
Nitrososphaerales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales	14.93 %
Borreliaceae	family	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Borreliaceae	1.49 %
unclassified Nitrosopumilales	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales	1.49 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.49 %
Thaumarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota → Thaumarchaeota archaeon	0.75 %
Nitrosopumilaceae	family	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae	0.75 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.40 %
Nitrososphaeraceae	family	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	14.93 %
Borrelia	genus	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Borreliaceae → Borrelia	1.49 %
Nitrosopumilales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	1.49 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.49 %
Nitrosopumilus	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	0.75 %
Thaumarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota → Thaumarchaeota archaeon	0.75 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.40 %
unclassified Nitrososphaeraceae	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae	5.97 %
Candidatus Nitrosocosmicus	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	5.22 %
Nitrososphaera	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera	3.73 %
Borrelia hermsii	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Borreliaceae → Borrelia → Borrelia hermsii	1.49 %
Nitrosopumilales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	1.49 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.49 %
unclassified Nitrosopumilus	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus	0.75 %
Thaumarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota → Thaumarchaeota archaeon	0.75 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.40 %
Nitrososphaeraceae archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	5.97 %
Candidatus Nitrososphaera evergladensis	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	3.73 %
Borrelia hermsii	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Borreliaceae → Borrelia → Borrelia hermsii	1.49 %
Nitrosopumilales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	1.49 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.49 %
Nitrosopumilus sp.	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	0.75 %
Candidatus Nitrosocosmicus oleophilus	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus → Candidatus Nitrosocosmicus oleophilus	0.75 %
Thaumarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota → Thaumarchaeota archaeon	0.75 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000890\|JGI11643J12802_11080858	Not Available	1055	Open in IMG/M
3300003987\|Ga0055471_10213853	Not Available	605	Open in IMG/M
3300003987\|Ga0055471_10284090	Not Available	529	Open in IMG/M
3300003996\|Ga0055467_10133134	Not Available	733	Open in IMG/M
3300003998\|Ga0055472_10084182	Not Available	867	Open in IMG/M
3300003998\|Ga0055472_10173058	Not Available	653	Open in IMG/M
3300003999\|Ga0055469_10086228	Not Available	885	Open in IMG/M
3300004463\|Ga0063356_103882477	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	644	Open in IMG/M
3300004643\|Ga0062591_100527598	Not Available	1022	Open in IMG/M
3300005339\|Ga0070660_101011641	Not Available	702	Open in IMG/M
3300005459\|Ga0068867_101468906	All Organisms → cellular organisms → Archaea	634	Open in IMG/M
3300005719\|Ga0068861_101374103	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Borreliaceae → Borrelia → Borrelia hermsii	689	Open in IMG/M
3300006845\|Ga0075421_100596483	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Borreliaceae → Borrelia → Borrelia hermsii	1299	Open in IMG/M
3300006846\|Ga0075430_100035717	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	4216	Open in IMG/M
3300006846\|Ga0075430_100045802	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota → Thaumarchaeota archaeon	3694	Open in IMG/M
3300006847\|Ga0075431_101480883	Not Available	637	Open in IMG/M
3300006876\|Ga0079217_10102113	Not Available	1291	Open in IMG/M
3300006876\|Ga0079217_10136090	Not Available	1166	Open in IMG/M
3300006876\|Ga0079217_10761610	Not Available	664	Open in IMG/M
3300006880\|Ga0075429_100641344	Not Available	931	Open in IMG/M
3300006894\|Ga0079215_10179800	Not Available	1047	Open in IMG/M
3300006894\|Ga0079215_10517265	Not Available	750	Open in IMG/M
3300006918\|Ga0079216_10113522	Not Available	1340	Open in IMG/M
3300007004\|Ga0079218_11299275	Not Available	766	Open in IMG/M
3300007004\|Ga0079218_12416508	Not Available	618	Open in IMG/M
3300007004\|Ga0079218_13207960	Not Available	553	Open in IMG/M
3300009081\|Ga0105098_10153177	Not Available	1037	Open in IMG/M
3300009094\|Ga0111539_10087274	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	3665	Open in IMG/M
3300009100\|Ga0075418_10023352	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	6784	Open in IMG/M
3300009100\|Ga0075418_10073220	Not Available	3648	Open in IMG/M
3300009146\|Ga0105091_10663153	Not Available	544	Open in IMG/M
3300009156\|Ga0111538_10107747	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	3539	Open in IMG/M
3300009156\|Ga0111538_11153659	Not Available	979	Open in IMG/M
3300009157\|Ga0105092_10496347	Not Available	699	Open in IMG/M
3300009157\|Ga0105092_10865117	Not Available	532	Open in IMG/M
3300009168\|Ga0105104_10009347	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	6301	Open in IMG/M
3300009168\|Ga0105104_10020597	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus → Candidatus Nitrosocosmicus oleophilus	3864	Open in IMG/M
3300009304\|Ga0116588_1137777	Not Available	602	Open in IMG/M
3300009553\|Ga0105249_11023144	Not Available	895	Open in IMG/M
3300009610\|Ga0105340_1184032	Not Available	874	Open in IMG/M
3300009789\|Ga0126307_10013560	All Organisms → cellular organisms → Archaea	5991	Open in IMG/M
3300009789\|Ga0126307_10026784	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	4411	Open in IMG/M
3300009840\|Ga0126313_10518023	Not Available	956	Open in IMG/M
3300010036\|Ga0126305_10075669	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1972	Open in IMG/M
3300010037\|Ga0126304_10037495	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2891	Open in IMG/M
3300010037\|Ga0126304_10088237	All Organisms → Viruses → Predicted Viral	1944	Open in IMG/M
3300010038\|Ga0126315_10406388	Not Available	857	Open in IMG/M
3300010038\|Ga0126315_10474057	Not Available	795	Open in IMG/M
3300010039\|Ga0126309_11089196	Not Available	542	Open in IMG/M
3300010041\|Ga0126312_10538882	Not Available	837	Open in IMG/M
3300010045\|Ga0126311_11929005	Not Available	502	Open in IMG/M
3300010166\|Ga0126306_10299778	Not Available	1238	Open in IMG/M
3300010371\|Ga0134125_10824362	All Organisms → cellular organisms → Archaea → TACK group	1020	Open in IMG/M
3300010403\|Ga0134123_10412808	Not Available	1242	Open in IMG/M
3300011400\|Ga0137312_1031805	All Organisms → cellular organisms → Archaea	808	Open in IMG/M
3300012672\|Ga0137317_1035121	Not Available	509	Open in IMG/M
3300012891\|Ga0157305_10107059	Not Available	698	Open in IMG/M
3300012902\|Ga0157291_10390552	Not Available	512	Open in IMG/M
3300012943\|Ga0164241_10350465	Not Available	1057	Open in IMG/M
3300013306\|Ga0163162_10290781	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1766	Open in IMG/M
3300015077\|Ga0173483_10006227	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	4015	Open in IMG/M
3300015371\|Ga0132258_10360131	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	3600	Open in IMG/M
3300015372\|Ga0132256_100025005	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	5344	Open in IMG/M
3300015374\|Ga0132255_100070220	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	4654	Open in IMG/M
3300015374\|Ga0132255_102082154	Not Available	864	Open in IMG/M
3300018067\|Ga0184611_1148482	Not Available	829	Open in IMG/M
3300018073\|Ga0184624_10071271	Not Available	1448	Open in IMG/M
3300018432\|Ga0190275_10573845	Not Available	1172	Open in IMG/M
3300018432\|Ga0190275_10727528	Not Available	1051	Open in IMG/M
3300018465\|Ga0190269_10069793	Not Available	1656	Open in IMG/M
3300018466\|Ga0190268_11913490	Not Available	541	Open in IMG/M
3300018469\|Ga0190270_10060032	Not Available	2703	Open in IMG/M
3300018469\|Ga0190270_12962526	Not Available	537	Open in IMG/M
3300018476\|Ga0190274_10083652	Not Available	2467	Open in IMG/M
3300018481\|Ga0190271_10133319	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	2364	Open in IMG/M
3300018481\|Ga0190271_10505665	Not Available	1320	Open in IMG/M
3300018481\|Ga0190271_10568890	Not Available	1250	Open in IMG/M
3300019356\|Ga0173481_10090321	Not Available	1154	Open in IMG/M
3300019767\|Ga0190267_11553262	Not Available	514	Open in IMG/M
3300019884\|Ga0193741_1000588	All Organisms → cellular organisms → Archaea	10851	Open in IMG/M
3300025537\|Ga0210061_1000761	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	4891	Open in IMG/M
3300025559\|Ga0210087_1003388	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	3719	Open in IMG/M
3300025567\|Ga0210076_1015897	Not Available	1601	Open in IMG/M
3300025791\|Ga0210115_1052733	Not Available	865	Open in IMG/M
3300025961\|Ga0207712_11077648	Not Available	715	Open in IMG/M
3300026089\|Ga0207648_11686852	All Organisms → cellular organisms → Archaea	595	Open in IMG/M
3300026118\|Ga0207675_101269881	Not Available	757	Open in IMG/M
3300026535\|Ga0256867_10030009	Not Available	2280	Open in IMG/M
3300027378\|Ga0209981_1043154	Not Available	676	Open in IMG/M
3300027462\|Ga0210000_1015873	Not Available	1135	Open in IMG/M
3300027617\|Ga0210002_1044291	Not Available	759	Open in IMG/M
3300027637\|Ga0209818_1085004	Not Available	818	Open in IMG/M
3300027650\|Ga0256866_1015604	All Organisms → cellular organisms → Archaea	1907	Open in IMG/M
3300027665\|Ga0209983_1149723	Not Available	535	Open in IMG/M
3300027675\|Ga0209077_1218503	Not Available	531	Open in IMG/M
3300027691\|Ga0209485_1128572	Not Available	739	Open in IMG/M
3300027695\|Ga0209966_1039579	Not Available	979	Open in IMG/M
3300027717\|Ga0209998_10168516	Not Available	567	Open in IMG/M
3300027722\|Ga0209819_10164011	Not Available	777	Open in IMG/M
3300027886\|Ga0209486_10662990	Not Available	669	Open in IMG/M
3300027907\|Ga0207428_10589468	Not Available	802	Open in IMG/M
3300027909\|Ga0209382_10086125	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	3697	Open in IMG/M
3300027909\|Ga0209382_10916617	Not Available	921	Open in IMG/M
3300028380\|Ga0268265_10463924	Not Available	1186	Open in IMG/M
3300030006\|Ga0299907_10411357	Not Available	1084	Open in IMG/M
3300030006\|Ga0299907_11158711	Not Available	558	Open in IMG/M
3300030619\|Ga0268386_10030192	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	4288	Open in IMG/M
3300031228\|Ga0299914_10130444	All Organisms → cellular organisms → Archaea	2224	Open in IMG/M
3300031228\|Ga0299914_10938080	Not Available	711	Open in IMG/M
3300031228\|Ga0299914_11011642	Not Available	678	Open in IMG/M
3300031229\|Ga0299913_10024115	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	5669	Open in IMG/M
3300031229\|Ga0299913_10393701	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	1373	Open in IMG/M
3300031547\|Ga0310887_10222740	Not Available	1038	Open in IMG/M
3300031548\|Ga0307408_100876272	Not Available	820	Open in IMG/M
3300031548\|Ga0307408_101269978	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	689	Open in IMG/M
3300031562\|Ga0310886_10375860	Not Available	832	Open in IMG/M
3300031731\|Ga0307405_11895415	Not Available	532	Open in IMG/M
3300031824\|Ga0307413_10589941	All Organisms → cellular organisms → Archaea	908	Open in IMG/M
3300031847\|Ga0310907_10056194	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	1549	Open in IMG/M
3300031852\|Ga0307410_10574034	Not Available	938	Open in IMG/M
3300031903\|Ga0307407_10838025	All Organisms → cellular organisms → Archaea	702	Open in IMG/M
3300031908\|Ga0310900_10678196	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	823	Open in IMG/M
3300031944\|Ga0310884_10138689	Not Available	1242	Open in IMG/M
3300032000\|Ga0310903_10810714	Not Available	513	Open in IMG/M
3300032002\|Ga0307416_102311139	Not Available	638	Open in IMG/M
3300032004\|Ga0307414_10386451	Not Available	1212	Open in IMG/M
3300032005\|Ga0307411_10612674	Not Available	938	Open in IMG/M
3300032013\|Ga0310906_10183484	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	1254	Open in IMG/M
3300032075\|Ga0310890_10123903	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	1666	Open in IMG/M
3300032126\|Ga0307415_100409120	Not Available	1161	Open in IMG/M
3300032179\|Ga0310889_10474633	Not Available	631	Open in IMG/M
3300034148\|Ga0364927_0081560	Not Available	881	Open in IMG/M
3300034151\|Ga0364935_0055321	Not Available	1163	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	67.16%
Host-Associated	Host-Associated	32.84%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	49.25%
Plants	Host-Associated → Plants	32.84%
Aquatic	Environmental → Aquatic	17.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	47.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.90%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.94%
Marine	Environmental → Aquatic → Marine	7.46%
Freshwater	Environmental → Aquatic → Freshwater	5.97%
Sediment	Environmental → Aquatic → Sediment	4.48%
Floodplain	Environmental → Terrestrial → Floodplain	1.49%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	19.40%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.70%
Wetlands	Environmental → Aquatic → Marine → Wetlands	7.46%
Sediment	Environmental → Aquatic → Freshwater → Sediment	5.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.24%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.49%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.49%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	19.40%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	9.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.70%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	7.46%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.72%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	5.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.48%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	3.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.24%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.49%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.49%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	16.42%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.45%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	8.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	8.96%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	7.46%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	7.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.72%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	5.97%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	5.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	3.73%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.24%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.24%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.24%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.49%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.49%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.49%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.49%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.49%
Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300003996	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2	Environmental	Open in IMG/M
3300003998	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2	Environmental	Open in IMG/M
3300003999	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009304	Microbial communities from sediment of the River Tyne Estuary, UK ? Pasteurized_176d_2 SPAdes	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011400	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT133_2	Environmental	Open in IMG/M
3300012672	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT266_2	Environmental	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300019884	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2	Environmental	Open in IMG/M
3300025537	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1 (SPAdes)	Environmental	Open in IMG/M
3300025559	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025567	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025791	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026535	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)	Environmental	Open in IMG/M
3300027378	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM (SPAdes)	Host-Associated	Open in IMG/M
3300027462	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM (SPAdes)	Host-Associated	Open in IMG/M
3300027617	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027637	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)	Environmental	Open in IMG/M
3300027650	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67 HiSeq	Environmental	Open in IMG/M
3300027665	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027675	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027691	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)	Environmental	Open in IMG/M
3300027695	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes)	Host-Associated	Open in IMG/M
3300027717	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300034148	Sediment microbial communities from East River floodplain, Colorado, United States - 18_j17	Environmental	Open in IMG/M
3300034151	Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11643J12802_110808581	3300000890	Soil	MFNNFNGINASNDILPKQFLNYIDYELSCFEKITNKKFFFNLLKNDKFELNVYESKEDNNKSKYHIIYRANNLYQFIKRLLMIREYLIKYFDNKLTK
Ga0055471_102138531	3300003987	Natural And Restored Wetlands	MFNNFNGINVSNDILPKQFLNYIYYELSCFEKITNKKFFFNLLKNDKFELNVYESKEDNNKSKYQIIYRANNLYQFIKRLLMIRE
Ga0055471_102840901	3300003987	Natural And Restored Wetlands	MFNNFNNINTSYYVLPRQFLNYIDYELSCFEKIINKKFFFNILKNDKFELNVYVSKEEDDNDKSKYHIIYRANNLYQFIKRLLMIREYLIK
Ga0055467_101331341	3300003996	Natural And Restored Wetlands	MLMSNSNNFNTVNINSYSHILPKQFLNYIDYELSCFEKITNKKFFFNLLKNDKFELNVYESKEQDNNKSKYQIIYRANNLYQF
Ga0055472_100841823	3300003998	Natural And Restored Wetlands	MFNNFNGINVSNDILPKQFLNYIYYELSCFEKITNKKFFFNLLKNDKFELNVYESKEDNNKSKYQIIYRANNLYQFIKRLLMIREYL
Ga0055472_101730581	3300003998	Natural And Restored Wetlands	MFNNFNNINTNNYVLPRQFLKYIDYEISYFEKITNKKFFFILKNDKFQLNVYDSKKKKEDNDKSKYQIIYRANNLYQFIKRLLMIREYL
Ga0055469_100862283	3300003999	Natural And Restored Wetlands	MFNNFNGINVSNDILPKQFLNYIYYELSCFEKITNKKFFFNLLKNDKFELNVYESKEDNNKSKYQIIYRANNLYQF
Ga0063356_1038824772	3300004463	Arabidopsis Thaliana Rhizosphere	NYIDYELSCFEKITNKKFFFNILKNDNFELNVYESRKAEEGEGGGDNDKSKYQIIYRTNNLYQFIKRLLMIREYLIKHFDNNRTKTIIL*
Ga0062591_1005275982	3300004643	Soil	MFNNFNNINSSSYDLLPRQFLNYIDYELSCFEKITNKKFFFNILKNDKFELNVYESRKAEEGEGGGDNDKSKYQIIYRTNNLYQFIKRLLMIREYLIKQFDNNRTKTIIL*
Ga0070660_1010116411	3300005339	Corn Rhizosphere	MFNNFNNINSSSYDLLPRQFLNYIDYELSCFEKITNKKFFFNILKNDKFELNIYESRKAEEGEEGGEDNDKSKYQIIYRTNNLYQFIKRLLMIREYLIKHFDNNRTKTIIL*
Ga0068867_1014689061	3300005459	Miscanthus Rhizosphere	MYNNFNTSNYDILPKQFLNYIDYELSCFEKITNKKFFFNLLKNDKFELNVYESKKDNNKSKYQIIYRANNLYQFIKRLLMIREYLIKYFDNKLTKTIIV*
Ga0068861_1013741031	3300005719	Switchgrass Rhizosphere	MYNNFNTSNYDILPKQFLNYIDYELSCFEKITNKKFFFNLLKNDKFELNVYESKEDNNKSKYQIIYRANNLYQFIKRLLMIREYLIKHFDNNRTKTIIL*
Ga0075428_1014439001	3300006844	Populus Rhizosphere	MFNNINNINSSSYDLVPRQFLNYIDYELSCFEKITNKKFFFNILKNDKFELNVYESRKAEEEGEGERDNDKSKYQIIYRTNN
Ga0075421_1005964831	3300006845	Populus Rhizosphere	MFNNFDGINASNGILPKQFLNYIDYELSCFEKITNKKFFFNLLKNDKFELNVYESKEDNNQSKYHIIYRANNLYQFIKRLLMIREYLIKYFDNKLTKTIIV*
Ga0075430_1000357175	3300006846	Populus Rhizosphere	MFNNFNGINASNDILPKQFLNYIDYELSCFEKITNKKFFFNLLKNDKFELNVYESKEDNNQSKYHIIYRANNLYQFIKRLLMIREYLIKYFDNKLTKTIIV*
Ga0075430_1000458021	3300006846	Populus Rhizosphere	SMFNNINNINSSSYDLVPRQFLNYIDYELSCFEKITNKKFFFNVLKNDKFELNVYESRKAEEEGEGERDNDKSKYQIIYRTNNLYQFIKRLLMIREYLIKHFDNNGTKTMVL*
Ga0075431_1014808831	3300006847	Populus Rhizosphere	MFNNINNINSSSYDLVPRQFLNYIDYELSCFEKITNKKFFFNVLKNDKFELNVYESRKAEEEGEGERDNDKSKYQIIYRTNNLYQFIKRLLMIREYLIKHFDNNGTKTMVL*
Ga0079217_101021133	3300006876	Agricultural Soil	YIDYELSCFEKITNKKFFFNILKNDKFELNVYESKKAEDKEEDNHKSKYQIIYRANNLYQFIKRLLMIREYLIKHFDNNITKTIIL*
Ga0079217_101360901	3300006876	Agricultural Soil	MFNNFNNINASNYDVLPRQFLNYIDYELSCFEKITNKKFFFNILKNDKFELNVYESKKAEEEEDNDKSKYQIIYRANNLYQFIKRLLMIREYLIKHFDNNITK
Ga0079217_107616101	3300006876	Agricultural Soil	MTNNNFNTNHTSYSDLPKQFLNYINYELSFFEKIVDRKFLINILRNDRFELKVSKSKEEDNNNNDKSKYQLIYRTNNLYRFIKNLLMIREYLIKNFSNKITTT*
Ga0075429_1006413441	3300006880	Populus Rhizosphere	PKQFLNYIDYELSCFEKITNKKFFFNLLKNDKFELNVYESKEDNNKSKYQIIYRANDLYQFIKRLLMIREYLIKYFDNKLTKTIIV*
Ga0079215_101798002	3300006894	Agricultural Soil	MFNNFNNINASSYDVLPRQFLIYIDYELSCFEKITNKKFFFNILKNDKFELNVYESKKAEEEDNDKSKYHIIYRANNLYQFIKRLLMIREYLIKHFDNNITKTIIL*
Ga0079215_105172652	3300006894	Agricultural Soil	MAITNNNISSYNIPKQFLNYINYELSFFEKIVDRKFLINILRNDRFELKVSKSKEEDNNNDKSKYQLIYRTNNLYRFIKNLLMIREYLIKNFSNKIIKT*
Ga0079216_101135222	3300006918	Agricultural Soil	MFNNFNNINASNYDVLPRQFLNYIDYELSCFEKITNKKFFFNILKNDKFELNVYESKKAEEEEDNDKSKYQIIYRANNLYQFIKRLLMIREYLIKHFDNNITKTIIL*
Ga0079218_112992751	3300007004	Agricultural Soil	MAMTNNNISSYNIPKQFLNYINYELSFFEKIVDRKFLINILRNDRFELKVSQSKEDDNNNDKSKYQLIYRTNNLYRFIKNLLMIREYLIKNFSNKIITT*
Ga0079218_124165081	3300007004	Agricultural Soil	MFNNFNNINTDSYNDILPKQFLNYIYYELSCFEKITNKKFFFNILKNDRFELNVYESKEEDTNKSKYQIIYRANNLYQFIKRLLMIREYLIKHFDNKRTKTIIL*
Ga0079218_132079602	3300007004	Agricultural Soil	MSPNNNVNNASINYDVLPKKFFNYINYELSFFEKITSKKFFFNILNNDRFELNVYESKEGDNDNNSKYHLIYGANNLNQFIKNLFMIREYLIKNFGNKITTTTTNE*
Ga0105098_101531771	3300009081	Freshwater Sediment	MFNNFNNINITSFDVLPKQFLNYIDYELSCFEKITNKKFFFNLLKNDKFELNVYESKEEDNNKSKYQIIYRANNLYQFIKRLLMIREYLIKYFDNKLTKTIIV*
Ga0111539_100872743	3300009094	Populus Rhizosphere	MFNNFNNINSSSYDLLPRQFLNYIDYELSCFEKMTNKKFFINILKNDKFELNIYESRKAEEGEEGGEDNDKSKYQIIYRTNNLYQFIKRLLMIREYLIKHFDNNRTKTIIL*
Ga0075418_100233529	3300009100	Populus Rhizosphere	MFNNFNGINASNDILPKQFLNYIDYELSCFEKITNKKFFFNLLKNDKFELNVYESKEDNNKSKYQIIYRANNLYQFIKRLLMIREYLIKYFDNKLTKTIIV*
Ga0075418_100732201	3300009100	Populus Rhizosphere	MFNNINNINSSSYDLVPRQFLNYIDYELSCFEKITNKKFFFNVLKNDKFELNVYESRKAEEEGEGERDNDKSKYQIIYRTNNLYQFIKRLLMIREYLIKHFDNN
Ga0105091_106631531	3300009146	Freshwater Sediment	MLMSNSNNFNTVNTNSYSDILPKQFLNYIDYELSCFEKITNKKFFFNLLKNDKFELNVYESKEEDNNKSKYQIIYRANNLYQFIKRLLMIREYLIKYFDNQRSKTIIL*
Ga0111538_101077474	3300009156	Populus Rhizosphere	MFNSFNNINSSSYDLLPRQFLNYIDYELSCFEKITNKKFFFNILKNDKFELNIYESRKAEEGEEGGEDNDKSKYQIIYRTNNLYQFIKRLLMIREYLIKHFDNNRTKTIIL*
Ga0111538_111536591	3300009156	Populus Rhizosphere	ILPKQFLNYIDYELSCFEKITNKKFFFNLLKNDKFELNVYESKEDNNKSKYQIIYRANDLYQFIKRLLMIREYLIKYFDNKLTKTIIV*
Ga0105092_104963471	3300009157	Freshwater Sediment	MLMSNSNNFNTVNTNSYSNILPKQFLNYIDYELGCFEKITNKKFFFNVLKNDKFELNVYVSKEEDDNDKSKYHIIYRANNLYQFIKRLLMIREYLIKHFDNKVTK*
Ga0105092_108651171	3300009157	Freshwater Sediment	MFNNFNGINASNDILPKQFLNYIDYELSCFEKITNKKFFFNILKNDRFELNVYESKEEDTNKSKYQIIYRANNLYQFIKRLLMIREYLIKHFDNKRTKTIIL*
Ga0105104_100093473	3300009168	Freshwater Sediment	MFNNFNGINASNDILPKQFLNYIDYELTCFEKITNKKFFFNLLKNDKFELNVYNKSKYQIIYRANNLYQFIKRLLMIREYLIKYFDNKLTKTIIV*
Ga0105104_100205974	3300009168	Freshwater Sediment	MLMSNSNNFNTVNTNSYSNILPKQFLNYIDYELSCFEKITNKKFFFNLLKNDKFELNVYESKEDNNKSKYQIIYRANNLYQFIKRLLMIREYLIKRIDNRSKTITL*
Ga0116588_11377772	3300009304	Sediment	MFNNFNGVNASNDILPKQFLNYIDYELSCFEKITNKKFFFNLLKNDKLELNVYESKEDNNKSKYQIIYRANNLYQFIKRLLMIREYLI
Ga0105249_110231441	3300009553	Switchgrass Rhizosphere	ILKKELMFNNFNGINASNDILPKQFLNYIDYELSCFEKITNKKFFFNILKNDKFELNIYESRKAEEGEEVGEDNDKSKYQIIYRTNNLYQFIKRLLMIREYLIKHFDNNRTKTIIL*
Ga0105340_11840322	3300009610	Soil	MFNNFNGINASNDILPKQFLNYIDYELSCFEKITNKKFFFNLLKNDKFELNVYKSKEDNNKSKYQIIYRANNLYQFIKRLLMIREYLIKYFDNKLTKTIIV*
Ga0126307_100135603	3300009789	Serpentine Soil	MFNNFNNINASSYDVLPRQFLNYIDYELSCFEKITNKKFFFNILKYDKFELNVYESKKAEEEEEDNDKSKYQIIYRANNLYQFIKRLLMIREYLIKHFDNNITKTIIL*
Ga0126307_100267848	3300009789	Serpentine Soil	MFNNFNNINASSYDLLPRQFLNYIDYELSYFEKITNKKFFFILKNDKFQLNVYDSKKKKEEGDNDKYDKSKYQIIYRANNLYQFIKRLLMIREYLIKHFDNNTTKTLIL*
Ga0126313_105180232	3300009840	Serpentine Soil	MFNNFNNINASSYDLLPRQFLNYIDYELSYFEKITNKKFFFILKNDKFQLNVYDSKKKKDDNDKSKYQIIYRVNNLYQFIKRLLMIREYLIKHFDNNTTKTLIL*
Ga0126305_100756691	3300010036	Serpentine Soil	MFNNFNNINASSYDLLPRQFLKYIDYEISYFGKITNKKFFFILKNDKFQLNVYDSKKKKEEGDNDKYDKSKYQIIYRANNLYQFIKRLLMIREYLIKHFDNNT
Ga0126304_100374951	3300010037	Serpentine Soil	MFNNFNNINASSYDLLPRQFLKYIDYEISYFEKITNKKFFFILKNDKFQLNVYDSQKKKDDNDKSKYQIIYRANNLYQFIKRLLMIREYLIKHFDNNTTKTLIL*
Ga0126304_100882373	3300010037	Serpentine Soil	MFNSYNNINTSFDVLPKQFLNYINYELSFIGKISHRKFLFNILSNDIFELKASKSKDNYKSNYQILYRTNNLYKFIKNLFMIREYLIKNFGNKITTTNE*
Ga0126315_104063881	3300010038	Serpentine Soil	MSMTNNNISSYNILPKQFLNYINYELSFFEKIANNKKFLFNVLRNDRFELKVSKSKEEKDDDNKSKYQVVYRANNIYQFIKRLFMIRDHLIKNFSNK*
Ga0126315_104740572	3300010038	Serpentine Soil	MFNNFNNINASSYDLLPRQFLNYIDYELSYFEKITNKKFFFILKNDKFQLNVYDSKKKKEEGDNDKYDKSKYQIIYRANNLYQFIKRLLMIREYLIKYFYNNRTKTI*
Ga0126309_110891961	3300010039	Serpentine Soil	MFNNFNNINASSYDLLPRQFLIYIDYELSCFEKITNKKFFFNILKNDKFELNVYESKKVEDKEEDNHKSKYQIIYRANNLYQFIIRLLMVREYLIKHFDNNITKTIIL*
Ga0126312_105388821	3300010041	Serpentine Soil	MSMTNNNFNTSSTSNYNALPKQFLNYIDYELSFFEKIADRKFLFNILNNDRFELRVSKSKDNNKSEYQLIYRANNLYQFVKRLLMIREYLIKNFGNDITKKQEIL*
Ga0126311_119290051	3300010045	Serpentine Soil	MFNNFNNINTSSYDLLPRQFLNYIDYELSYFEKITNKKFFFILKNDKFQLNVYDSKKKKDDNDKSKYQIIYRVNNLYQFIKRLLMIREYLIKHFDNNTTKTLIL*
Ga0126306_102997781	3300010166	Serpentine Soil	MFNNFNNINASSYDLLPRQFLNYIDYELSYFEKITNKKFFFNILKNDKELNVYESKKAEEEGDNDKYDKSKYQIIYRANNLYQFIKRLLMIREYLIKYFYNNRTKTI
Ga0134125_108243621	3300010371	Terrestrial Soil	MFNNFNGINASNDILPKQFLNYIDYELSCFEKITNKKFFFNLLKNDKFELNVYESKKDNNKSKYQIIYRANNLYQFIKRLLMIREYLIKRIDNRSKTITL*
Ga0134123_104128082	3300010403	Terrestrial Soil	MFNNFNGINASNDILPKQFLNYIDYELSCFEKITNKKFFFNLLKNDKFELNVYESKKDNNKSKYQIIYRANNLYQFIKRLLMIREYLIKYFDNKLTKTIIV*
Ga0137312_10318051	3300011400	Soil	NNFNNINASSYDVLPRQFLIYIDYELSCFEKITNKKFFFNILKNDKFELNVYESKEEDNNKSKYQIIYRANNLYQFIKRLLMIREYLIKYFDNKLTKTIIL*
Ga0137317_10351211	3300012672	Soil	KVLNNKKILKKELMFNNFNGINASNDILPKQFLNYIDYELSCFEKITNKKFFFNLLKNDKFELNVYESKEEEDDNKSKYQIIYRANNLYQFIKRLLMIREYLIKYFDNKLTKTIIV*
Ga0157305_101070592	3300012891	Soil	MFNNFNGINASNDILPKQFLNYIDYELSCFEKITNKKFFFNLLNNDKFELNVYESKEDNNKSKYQIIYRANNLYQFIKRLLMIREYLIKYFDNKLTKTIIV*
Ga0157291_103905522	3300012902	Soil	MFNNFNGINASNDILPKQFLNYIDYELSCFEKITNKKFFFNLLKNDKFELNVYESKENNNKSKYQIIYRANNLYQFIKRLLMIREYLFKYFDNQRSKTIIL*
Ga0164241_103504651	3300012943	Soil	MFNNFNGINASNDILPKQFLNYIDYELSCFEKITNKKFFFNLLKNDKFELNVYESKEDNNKSKYQIIYRANNLYQFIKRLLMIRDYLIKYFDNKLTKTIIV*
Ga0163162_102907812	3300013306	Switchgrass Rhizosphere	IDYELSCFEKITNKKFFFNILKNDKFELNVYESRKAEEGEGGEDNDKSKYQIIYRTNNLYQFIKRLLMIREYLIKHFDNNRTKTIIL*
Ga0173483_100062275	3300015077	Soil	MFNNFNNINSSSYDLLPRPFLNYIDYELSCFEKITNKKFFFNILTNDKFELNVYESRKAEETGGGGDNDKSKYQIIYRTNNLYQFIKRLLMIREYLIKHFDNNRTKTMIL*
Ga0132258_103601314	3300015371	Arabidopsis Rhizosphere	MFNNFNNINSSSYDLLPRQFLNYIDYELSCFEKMTNKKFFINILKNDKFELNIYESRKAEEGEEGGEDNDKSKYHIIYRTNNLYQFIKRLLMIREYLIKHFDNNRTKTIIL*
Ga0132256_1000250056	3300015372	Arabidopsis Rhizosphere	MFNSFNNINSSSYDLLPRQFLNYIDYELSCFEKITNKKFFFNILKNDKFELNIYESRKAEEGEEGGEDNDKSKYHIIYRTNNLYQFIKRLLMIREYLIKHFDNNRTKTIIL*
Ga0132255_1000702204	3300015374	Arabidopsis Rhizosphere	MFNSFNNINSSSYDLLPRQFLNYIDYELSCFEKITNKKFFFNILKNDKFELNIYESRKAEEGEDNDKSKYQIIYRTNNLYQFIKRLLMIREYLIKHFDNNRTKTIIL*
Ga0132255_1020821542	3300015374	Arabidopsis Rhizosphere	MFNNFNGINASNDILPKQFLNYIDYELSCFEKITNKKFFFNLLKNDKFELNVYESKKDNNKSKYQIIYRANNLYQFIKRLLMIR
Ga0184611_11484821	3300018067	Groundwater Sediment	MFNNFNGINASNDILPKQFLNYIDYELSCFEKITNKKFFFNLLKNDKFELNVYESKEDNNKSKYHIIYRANNLYQFIKRLLMIREYLIKYFDNKLTKTIIV
Ga0184624_100712712	3300018073	Groundwater Sediment	MLMSNSNNFNTVNTNSYSHILPKQFLNYIDYELSCFEKITNKKFFFNLLKNDKFELNVYESKEDNNKSKYHIIYRANNLYQFIKRLLMIREYLIKYFDNQRSKTIIV
Ga0190275_105738452	3300018432	Soil	MSNIINDINTNDNNILPKQFLNYIDYELFCFEKFTKKKFFFNVSKNGKFQLNVYGSKKYEEIEDNNKSKYQIIYRANNLYQFIKRLLMIREYLIKHFDNKVTK
Ga0190275_107275282	3300018432	Soil	MFNNFNGINASNDILPKQFLNYIDYELSCFEKITNKKFFFNLLKNDKFELNVYESKEENNNKSKYQIIYRANNLYQFIKRLLMIREYLIKYFDNKLTKTIIV
Ga0190269_100697932	3300018465	Soil	MFNNFNYIKAGSYDVLPRQFLNYIDYELSCFEKITNKKFFFNILKNDKFELNVYESKKAEEEEEDNDKSKYHIIYRANNLYQFIKRLLMIREYLIKHFDNNVTKTIIL
Ga0190268_119134901	3300018466	Soil	LIYIDYELSCFEKITNKKFFFNILKNDKFELNVYESKKAEDKEEDNHKSKYQIIYRANNLYQFIKRLLMIREYLIKHFDNNITKTIIL
Ga0190270_100600324	3300018469	Soil	MSNIINDINTNDNNILPKQFLNYIDYELFCFEKFTKKKFFFNVSKNGKFQLNVYGSKKYEEIEDNNKSKYQIIYRANNLYQFIKRLLMIREYLIKYFDNKVTK
Ga0190270_129625262	3300018469	Soil	QFLNYIDYELSCFEKITNKKFFFNLLKNDKFELNVYESKEEDNNKSKYQIIYRANNLYQFIKRLLMIREYLIKYFDNKLTKTIIL
Ga0190274_100836525	3300018476	Soil	MFNNFNNINASSYDLLPRQFLIYIDYELSCFEKITNKKFFFNILKNDKFELNVYESKKAEEEEEDNDKSKYHIIYRANNLYQFIKRLLMIREYLIKHFDNNVTKTIIL
Ga0190271_101333191	3300018481	Soil	QFLNYIDYELSCFEKITNKKFFFNLLKNDKFELNVYESKEEDNNKSKYQIIYRANNLYQFIKRLLMIREYLIKYFDNKLTKTIIV
Ga0190271_105056652	3300018481	Soil	MLMSNSNNFNTVNTNSYSDILPKQFLNYIDYELSCFEKITNKKFFFNLLKNDKFELNVYESKEDDNKSKYQIIYRANNLYQFIKRLLMIREYLIKYFDNRRSKTIIL
Ga0190271_105688901	3300018481	Soil	MSNIINDINTNDNNILLKQFLNYIDYELSCFEKFTKKKFFFNVSKNGKFQLNVYGSKKYEEIEDNNKSKYQIIYRANNLYQFIKRLLMIREYLIKYFDNKVTKK
Ga0173481_100903211	3300019356	Soil	MFNNFNNINSSSYDLLPRQFLNYIDYELSCFEKLTNKKFFFNILKNDKFELNVYESRKAEEREGGEDNDKSKYQIIYRTNNLYQFIKRLLIIREYLIKHFDNNRTKTIIL
Ga0190267_115532621	3300019767	Soil	MLMSNSNNFNTVNTNSYSNILPKQFLNYIDYELSCFEKITNKKFFFNLLKNDKFELNVYESKEDNNKSKYHIIYRANNLYQFIKRLLMIREYLIKYFDNKLTKTIIV
Ga0193741_10005884	3300019884	Soil	MFNNFNNINASSYDVLPRQFLIYIDYELSCFEKITNKKFFFNILKNDKFELNVYESKKAEDKEEDNHKSKYQIIYRANNLYQFIKRLLMIREYLIKHFDNNITKTIIL
Ga0210061_10007613	3300025537	Natural And Restored Wetlands	MFNNFNGINVSNDILPKQFLNYIYYELSCFEKITNKKFFFNLLKNDKFELNVYESKEDNNKSKYQIIYRANNLYQFIKRLLMIREYLIKYFDNKLTKTIIV
Ga0210087_10033885	3300025559	Natural And Restored Wetlands	NTIEMLMSNSNNFNTVNINSYSHILPKQFLNYIDYELSCFEKITNKKFFFNLLKNDKFELNVYESKEQDNNKSKYQIIYRANNLYQFIKRLLMIREYLIKYFDNKLTKTIIV
Ga0210076_10158972	3300025567	Natural And Restored Wetlands	MLMSNSNNFNTVNINSYSHILPKQFLNYIDYELSCFEKITNKKFFFNLLKNDKFELNVYESKEQDNNKSKYQIIYRANNLYQFIKRLLMIREYLIKYFDNRRSKTIIV
Ga0210115_10527332	3300025791	Natural And Restored Wetlands	MFNNFNGINVSNDILPKQFLNYIYYELSCFEKITNKKFFFNLLKNDKFELNVYESKEDNNKSKYQIIYRANNLYQFIKRLLMIREYLIKHFDNKITKTIIL
Ga0207712_110776481	3300025961	Switchgrass Rhizosphere	MFNNFNGINASNDILPKQFLNYIDYELSCFEKITNKKFFFNLLKNDKFELNVYESKEDNNKSKYQIIYRANNLYQFIKRLLMIREYLIKHFDNNRTKTIIL
Ga0207648_116868521	3300026089	Miscanthus Rhizosphere	MYNNFNTSNYDILPKQFLNYIDYELSCFEKITNKKFFFNLLKNDKFELNVYESKKDNNKSKYQIIYRANNLYQFIKRLLMIREYLIKYFDNQRSKTIIL
Ga0207675_1012698811	3300026118	Switchgrass Rhizosphere	MYNNFNTSNYDILPKQFLNYIDYELSCFEKITNKKFFFNLLKNDKFELNVYESKEDNNKSKYQIIYRANNLYQFIKRLLMIREYLIKHFDNNRTKTIIL
Ga0256867_100300091	3300026535	Soil	MYNNFNNINSSSYDVLPRQFLNYIDYELSCFEKITNKKFLFNISKNEKFELNVYQSKKEEEEADDKDKSKYQIIYRANNLYQFIKRLLMIREYLIKHFDNKTTKKPIVL
Ga0209981_10431541	3300027378	Arabidopsis Thaliana Rhizosphere	MFNNINNINSISYDLVPRQFLNYIDYELSCFEKITNKKFFFNVLKNDKFELNVYESRKVEGEEGEGERDNDKSKYQIIYRTNNLYQFIKRLLMIREYLIKHFDNNRTKKMIL
Ga0210000_10158732	3300027462	Arabidopsis Thaliana Rhizosphere	MFNNINNINSSSYDLVPRQFLNYIDYELSCFEKITNKKFFFNVLKNDKFELNVYESRKVEGEEGEGERDNDKSKYQIIYRTNNLYQFIKRLLMIREYLIKHFDNNRTKKMIL
Ga0210002_10442911	3300027617	Arabidopsis Thaliana Rhizosphere	MFNNFNGINASNDILPKQFLNYIDYELSCFEKITNKKFFFNLLKNDKFELNVYESKEDNNKSKYQIIYRANNLYQFIKRLLMIREYLIKYFDNKLTKTIIV
Ga0209818_10850041	3300027637	Agricultural Soil	MFNNFNNINASNYDVLPRQFLNYIDYELSCFEKITNKKFFFNILKNDKFELNVYESKKAEEEEDNDKSKYQIIYRANNLYQFIKRLLMIREYLIKH
Ga0256866_10156041	3300027650	Soil	NYIDYELSCFEKITNKKFLFNISKNEKFELNVYQSKKEEEEADDKDKSKYQIIYRANNLYQFIKRLLMIREYLIKHFDNKTTKKPIVL
Ga0209983_11497231	3300027665	Arabidopsis Thaliana Rhizosphere	MFNNFNNINASSYDLLPRQFLIYIDYELSCFEKITNKKFFFNLLNNDKFELNVYESKEDNNKSKYQIIYRANNLYQFIKRLLMIREYLIKYFDNKLTKTIIV
Ga0209077_12185032	3300027675	Freshwater Sediment	MSNSNNFNTVNTNSYSDILPKQFLNYIDYELSYFEKITNKKFFFNLLKNDKFELNVYESKEEDNNKSKYQIIYRANNLYQFI
Ga0209485_11285721	3300027691	Agricultural Soil	MFNNFNNINASNYDVLPRQFLNYIDYELSCFEKITNKKFFFNILKNDKFELNVYESKKAEEEEDNDKSKYQIIYRANNLYQFIKRLLMIREYLIKHFDNNITKTIIL
Ga0209966_10395791	3300027695	Arabidopsis Thaliana Rhizosphere	MFNNINNINSSSYDLVPRQFLNYIDYELSCFEKITNKKFFFNVLKNDKFELNVYESRKVEGEEGEGERDNDKSKYQIIYRTNNLYQFIKRLLMIREYLIKHFDYVLFLLASFRIIF
Ga0209998_101685161	3300027717	Arabidopsis Thaliana Rhizosphere	MFNNFNNINAGSYDVLPRQFLNYIDYELSCFEKITNKKFFFNILKNDKFELNVYESKKAEEKEEDNDKSKYHIIYRANNLYQFIKRLLMIREYLIKYFDNKLTKTIIV
Ga0209819_101640112	3300027722	Freshwater Sediment	MFNTFNNINITSFDVLPKQFLNYIDYELSCFEKITNKKFFFNLLKNDKFELNVYESKEEDTNKSKYQIIYRANNLYQFIKRLLMIREYLIKYFDNKVTK
Ga0209486_106629902	3300027886	Agricultural Soil	FLNYIDYELSCFEKITNKKFFFNILKNDKFELNVYESKKAEDKEEDNHKSKYQIIYRANNLYQFIKRLLMIREYLIKHFDNNITKTIIL
Ga0207428_105894681	3300027907	Populus Rhizosphere	MFNNFNNINSSSYDLLPRQFLNYIDYELSCFEKMTNKKFFINILKNDKFELNIYESRKAEEGEEGGEDNDKSKYQIIYRTNNLYQFIKRLLMIREYLIKHFDNNGTKTMVL
Ga0209382_100861252	3300027909	Populus Rhizosphere	MFNNINNINSSSYDLVPRQFLNYIDYELSCFEKITNKKFFFNVLKNDKFELNVYESRKAEEEGEGERDNDKSKYQIIYRTNNLYQFIKRLLMIREYLIKHFDNNGTKTMVL
Ga0209382_109166172	3300027909	Populus Rhizosphere	MFNNFDGINASNGILPKQFLNYIDYELSCFEKITNKKFFFNLLKNDKFELNVYESKEDNNQSKYHIIYRANNLYQFIKRLLMIREYLIKYFDNKLTKTIIV
Ga0268265_104639242	3300028380	Switchgrass Rhizosphere	MFNNFNNINSSSYDLLPRQFLNYIDYELSCFEKITNKKFFFNILKNDKFELNIYESRKAEEGEEVGEDNDKSKYQIIYRTNNLYQFIKRLLMIREYLIKHFDNNRT
Ga0299907_104113571	3300030006	Soil	DYELSCFEKITNKKFLFNISKNEKFELNVYQSKKEEEEADDKDKSKYQIIYRANNLYQFIKRLLMIREYLIKHFDNKTTKKPIVL
Ga0299907_111587111	3300030006	Soil	MFNNFNGINASNDILPKQFLNYIDYELSCFEKITNKKFFFNVLKNDKFELNVYESKEEEDDNKSKYQIIYRANNLYQFIKRLLMIREYLIKYFDNKLTKTIIL
Ga0268386_100301925	3300030619	Soil	DTSKLMYNNFNNINSSSYDVLPRQFLNYIDYELSCFEKITNKKFLFNISKNEKFELNVYQSKKEEEEADDKDKSKYQIIYRANNLYQFIKRLLMIREYLIKHFDNKTTKKPIVL
Ga0299914_101304441	3300031228	Soil	MYNNFNNINSSSYDVLPRQFLNYIDYELSCFEKIINKKFLFNISKNEKFELNVYQSKKEEEEADDKDKSKYQIIYRANNLYQFIKRLLMIREYLIKHFDNKTTKKPIVL
Ga0299914_109380801	3300031228	Soil	MFNNFNSINTSYDLMPKQLLNYIDYELSCFEKITNKKFFFNVLKNDKFELNVYESKEEEDDNKSKYQIIYRANNLYQFIKRL
Ga0299914_110116422	3300031228	Soil	MFNNFNNINTSSYNDVLPKQFLNYINYELGFFEKITNKKFCFNVLNNDRFELNVYESKKEEGEEDDKCKSKCQIIYRTNNLYQFIKRLLMIREY
Ga0299913_100241156	3300031229	Soil	MFNNFNNINTSSYNDVLPKQFLNYINYELGFFEKITNKKFCFNVLNNDRFELNVYESKKEEGEEDDKCKSKCQIIYRANNLYQFIKRLLMIREYLIKHFCNNKTKTIIL
Ga0299913_103937011	3300031229	Soil	MSNNFNNINTSYYVLPRQFLNYIEYELSCFEKISNKKFFFNILKNDKFELNIYESKEDNNKSKYQIIYRANNLYQFIKRLLMIRFN
Ga0310887_102227401	3300031547	Soil	LPKQFLNYIDYELSCFEKITNKKFFFNLLKNDKFELNVYESKEDNNKSKYQIIYRANNLYQFIKRLLMIREYLIKYFDNKLTKTIIV
Ga0307408_1008762721	3300031548	Rhizosphere	MFNNFNNITTNYDVLPRQFLNYIDYELSCFEKITNKKFFFNILKSDKFQLNVYDSKKKKDDNDKSKYQIIYRANNLYQFIKRLLMIREYLIKYFYNNRTKTIIL
Ga0307408_1012699781	3300031548	Rhizosphere	MFNNFNNINASSYDLLPRQFLNYIDYELSYFEKITNKKFFFNILKNDKXELNVYESKKAEEEGDNDKYDKSKYQIIYRTNNLYQFIKRLLMIREYLIKHFDNNRTKTMIL
Ga0310886_103758601	3300031562	Soil	MFNNFNGINASNDILPKQFLNYIDYELSCFEKITNKKFFFNLLKNDKFELNVYESKKDNNKSKYQIIYRANNLYQFIKRLLMIREYLIKYFDNKLTKTIIV
Ga0307405_118954151	3300031731	Rhizosphere	MFNNFNNINASSYDLLPRQFLNYIDYELSYFEKITNKKFFFNILKNDQLELNVYESKKAEEEGDNDKYDKSKYQIIYRANNLYQFIKRLLMIREYLIKYFYNNRTKTIIL
Ga0307413_105899411	3300031824	Rhizosphere	MFNNFNNINASSYDVLPRQFLNYIDYELSYFEKITNKKFLFNILKNYKXELNVYESKKVEEEGDNDKYDKSKYQIIYRANNLYQFIKRLLMIREYLIKYFYNNRTKTI
Ga0310907_100561941	3300031847	Soil	MFNNFNGINASNDILPKQFLNYIDYELSCFEKITNKKFFFNLLNNDKFELNVYESKEDNNKSKYQIIYRANNLYQFIKRLLMIREYLIKYFDNKLTKTIIV
Ga0307410_105740342	3300031852	Rhizosphere	MFNNFNNINASSYDLLPRQFLKYIDYEISYFEKITNKKFFFILKNDKFQLNVYDSKKKKEEGDNDKYDKSKYQIIYRANNLYQFIKRLLMIREYLIKHFDNNITKTIIL
Ga0307407_108380251	3300031903	Rhizosphere	MFNNFNNINASSYDLLPRQFLNYIDYELSYFEKITNKKFFFNILKNDKXELNVYESKKAEEEGDNDKYDKSKYQIIYRANNLYQFIKRLLMIREYLIKYFYNNRTKTI
Ga0310900_106781961	3300031908	Soil	MFNNFNGINASNDILPKQFLNYIDYELSCFEKITNKKFFFNLLNNDKFELNVYESKEDNNKSKYQIIYRANNLYQFIKRLLMIREYLIKYFDNKLTKT
Ga0310884_101386892	3300031944	Soil	MFNNFNGINASNDILPKQFLNYIDYELSCFEKITNKKFFFNLLNNDKFELNVYESKEDNNKSKYQIIYRANNLYQFIKRLLMIREYLIKYF
Ga0310903_108107142	3300032000	Soil	MFNNFNGINASNDILPKQFLNYIDYELSCFEKITNKKFFFNLLNNDKFELNVYESKEDNNKSKYQIIYRANNLYQFIKRLLMIR
Ga0307416_1023111391	3300032002	Rhizosphere	SNGILPKQFLNYIDYELSCFEKITNKKFFFNLLKNDKFELNVYESKEDNNKSKYQIIYRANNLYQFIKRLLMIREYLIKYFDNKLTKTIIV
Ga0307414_103864511	3300032004	Rhizosphere	MFNNFNNINASSYDLLPRQFLNYIDYELSYFEKITNKKFFFNILKNDKXELNVYESKKAEEEGDNDKYDKSKYQIIYRTNNLYQFIKRLLMIREYLIKHFDNNRTKTMI
Ga0307411_106126742	3300032005	Rhizosphere	MFNNFNNINASSYDLLPRQFLNYIDYELSYFEKITNKKFFFILKNDKFQLNVYDSKKKKDDNDKSKYQIIYRANNLYQFIKRLLMIREYLIKYFYNNRTKTIIL
Ga0310906_101834842	3300032013	Soil	MFNNFNGINASNDILPKQFLNYIDYELSCFEKITNKKFFFNLLKNDKFELNVYESKEDNNKSKYQIIYRANNLYQFIKRLLMIREYLIKRIDNRSK
Ga0310890_101239033	3300032075	Soil	MYNNFNTSNYDILPKQFLNYIDYELSCFEKITNKKFFFNLLKNDKFELNVYESKEDNNKSKYQIIYRANNLYQFIKRLLMIREYLIKRIDNRSKTITL
Ga0307415_1004091201	3300032126	Rhizosphere	MFNNFNNINASSYDLLPRQFLKYIDYEISYFEKITNKKFFFILKNDKFQLNVYDSKKKKEEGDNDKYDKSKYQIIYRANNLYQFIKRLLMIREYLIKHFDNNRTKTLIL
Ga0310889_104746332	3300032179	Soil	MFNNFNGINASNDILPKQFLNYIDYELSCFEKITNKKFFFNLLKNDKFELNVYESKEDNNKSKYQIIYRANNLYQFIKRLLMIREYLIKYFDNKLT
Ga0364927_0081560_22_330	3300034148	Sediment	MFNNFNGINASNDILPKQFLNYIDYELSCFEKITNKKFFFNLLKNDKFELNVYESKEEDNNKSKYQIIYRANNLYQFIKRLLMIREYLIKYFDNKLTKTIIV
Ga0364935_0055321_116_418	3300034151	Sediment	MSNIINDINTNDNNILLKQFLNYIDYFVLKNSQKKFFFNVSKNGKFQLNVYGSKKYEEIEDNNKSKYQIIYRANNLYQFIKRLLMTREYLIKYFDNKVTK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F058780

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences