Metagenome / Metatranscriptome Family F058528

Basic Information
Family ID	F058528
Family Type	Metagenome / Metatranscriptome
Number of Sequences	135
Average Sequence Length	53 residues
Representative Sequence	VPDGLSVWPEDDVARAICNALTMATGALVTLRKDQQLKDQGVYAIGIGYKLD
Number of Associated Samples	115
Number of Associated Scaffolds	135

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.22 %
% of genes near scaffold ends (potentially truncated)	97.78 %
% of genes from short scaffolds (< 2000 bps)	90.37 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (57.778 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil (8.889 % of family members)
Environment Ontology (ENVO)	Unclassified (27.407 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (45.185 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 3.85% Coil/Unstructured: 46.15%
Feature Viewer

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Pfam ID	Name	% Frequency in 135 Family Scaffolds
PF12276	DUF3617	8.89
PF13458	Peripla_BP_6	8.89
PF16868	NMT1_3	6.67
PF06441	EHN	1.48
PF07007	LprI	1.48
PF09361	Phasin_2	1.48
PF13417	GST_N_3	1.48
PF03734	YkuD	0.74
PF01464	SLT	0.74
PF08530	PepX_C	0.74
PF11994	DUF3489	0.74
PF13467	RHH_4	0.74
PF02668	TauD	0.74
PF13545	HTH_Crp_2	0.74
PF00578	AhpC-TSA	0.74
PF05362	Lon_C	0.74
PF01177	Asp_Glu_race	0.74
PF07635	PSCyt1	0.74
PF04392	ABC_sub_bind	0.74
PF00120	Gln-synt_C	0.74
PF00072	Response_reg	0.74

COG ID	Name	Functional Category	% Frequency in 135 Family Scaffolds
COG0596	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold	Coenzyme transport and metabolism [H]	1.48
COG3755	Uncharacterized conserved protein YecT, DUF1311 family	Function unknown [S]	1.48
COG0466	ATP-dependent Lon protease, bacterial type	Posttranslational modification, protein turnover, chaperones [O]	0.74
COG1067	Predicted ATP-dependent protease	Posttranslational modification, protein turnover, chaperones [O]	0.74
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.74
COG1750	Predicted archaeal serine protease, S18 family	General function prediction only [R]	0.74
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.74
COG2936	Predicted acyl esterase	General function prediction only [R]	0.74
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.74
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.74
COG3480	Predicted secreted protein YlbL, contains PDZ domain	Signal transduction mechanisms [T]	0.74

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.78 %
Unclassified	root	N/A	42.22 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.78 %
Unclassified	root	N/A	42.22 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.78 %
Unclassified	root	N/A	42.22 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	54.07 %
Unclassified	root	N/A	42.22 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.22 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	22.22 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.74 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.22 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8.89 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.74 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.22 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.44 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.74 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.22 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.70 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.74 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.22 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.48 %
Bradyrhizobium icense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium icense	0.74 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.74 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.74 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.22 %
Bradyrhizobium sp. JYMT SZCCT0180	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. JYMT SZCCT0180	1.48 %
Bradyrhizobium icense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium icense	0.74 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.74 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.74 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000041\|ARcpr5oldR_c013715	Not Available	697	Open in IMG/M
3300000043\|ARcpr5yngRDRAFT_c009943	Not Available	810	Open in IMG/M
3300000890\|JGI11643J12802_12075255	Not Available	574	Open in IMG/M
3300000955\|JGI1027J12803_108547148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1591	Open in IMG/M
3300000956\|JGI10216J12902_104579418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3848	Open in IMG/M
3300001430\|JGI24032J14994_101709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	862	Open in IMG/M
3300004114\|Ga0062593_101662571	Not Available	696	Open in IMG/M
3300004156\|Ga0062589_100133540	All Organisms → cellular organisms → Bacteria → Proteobacteria	1665	Open in IMG/M
3300004156\|Ga0062589_102677115	Not Available	519	Open in IMG/M
3300004463\|Ga0063356_100465904	All Organisms → cellular organisms → Bacteria → Proteobacteria	1656	Open in IMG/M
3300004480\|Ga0062592_100857903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	813	Open in IMG/M
3300005093\|Ga0062594_101199703	Not Available	752	Open in IMG/M
3300005331\|Ga0070670_100169021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1896	Open in IMG/M
3300005332\|Ga0066388_100423104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1975	Open in IMG/M
3300005332\|Ga0066388_102741140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	900	Open in IMG/M
3300005332\|Ga0066388_103626946	All Organisms → cellular organisms → Bacteria → Proteobacteria	788	Open in IMG/M
3300005332\|Ga0066388_105132405	Not Available	665	Open in IMG/M
3300005332\|Ga0066388_105422160	Not Available	646	Open in IMG/M
3300005332\|Ga0066388_107168821	Not Available	560	Open in IMG/M
3300005332\|Ga0066388_108060061	All Organisms → cellular organisms → Bacteria → Proteobacteria	526	Open in IMG/M
3300005336\|Ga0070680_100313136	Not Available	1332	Open in IMG/M
3300005347\|Ga0070668_100342228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1264	Open in IMG/M
3300005353\|Ga0070669_101085442	Not Available	689	Open in IMG/M
3300005439\|Ga0070711_100840403	All Organisms → cellular organisms → Bacteria → Proteobacteria	781	Open in IMG/M
3300005455\|Ga0070663_100622164	Not Available	910	Open in IMG/M
3300005456\|Ga0070678_101219882	All Organisms → cellular organisms → Bacteria → Proteobacteria	698	Open in IMG/M
3300005468\|Ga0070707_100497184	All Organisms → cellular organisms → Bacteria → Proteobacteria	1181	Open in IMG/M
3300005546\|Ga0070696_101287636	Not Available	620	Open in IMG/M
3300005549\|Ga0070704_100906419	Not Available	793	Open in IMG/M
3300005617\|Ga0068859_102917988	Not Available	523	Open in IMG/M
3300005719\|Ga0068861_100733897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	921	Open in IMG/M
3300005764\|Ga0066903_101678538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium icense	1209	Open in IMG/M
3300005834\|Ga0068851_10051089	All Organisms → cellular organisms → Bacteria → Proteobacteria	2100	Open in IMG/M
3300005840\|Ga0068870_10640930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	727	Open in IMG/M
3300005841\|Ga0068863_100788265	All Organisms → cellular organisms → Bacteria → Proteobacteria	947	Open in IMG/M
3300005842\|Ga0068858_100545270	All Organisms → cellular organisms → Bacteria → Proteobacteria	1122	Open in IMG/M
3300006057\|Ga0075026_100583235	All Organisms → cellular organisms → Bacteria → Proteobacteria	655	Open in IMG/M
3300006057\|Ga0075026_100844716	Not Available	558	Open in IMG/M
3300006058\|Ga0075432_10455707	Not Available	562	Open in IMG/M
3300006806\|Ga0079220_10456339	Not Available	857	Open in IMG/M
3300006844\|Ga0075428_101127358	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300006854\|Ga0075425_102511279	Not Available	570	Open in IMG/M
3300006881\|Ga0068865_101556296	All Organisms → cellular organisms → Bacteria → Proteobacteria	593	Open in IMG/M
3300006904\|Ga0075424_100856677	All Organisms → cellular organisms → Bacteria → Proteobacteria	969	Open in IMG/M
3300009148\|Ga0105243_12360120	All Organisms → cellular organisms → Bacteria → Proteobacteria	570	Open in IMG/M
3300009174\|Ga0105241_10047955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3249	Open in IMG/M
3300010043\|Ga0126380_10191451	All Organisms → cellular organisms → Bacteria → Proteobacteria	1359	Open in IMG/M
3300010043\|Ga0126380_11062550	All Organisms → cellular organisms → Bacteria → Proteobacteria	687	Open in IMG/M
3300010047\|Ga0126382_11002741	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300010047\|Ga0126382_12076483	All Organisms → cellular organisms → Bacteria → Proteobacteria	543	Open in IMG/M
3300010361\|Ga0126378_11183422	All Organisms → cellular organisms → Bacteria → Proteobacteria	863	Open in IMG/M
3300010362\|Ga0126377_13179051	All Organisms → cellular organisms → Bacteria → Proteobacteria	531	Open in IMG/M
3300010366\|Ga0126379_10010576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6464	Open in IMG/M
3300010366\|Ga0126379_10591489	All Organisms → cellular organisms → Bacteria → Proteobacteria	1194	Open in IMG/M
3300010373\|Ga0134128_10546415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1291	Open in IMG/M
3300010373\|Ga0134128_12781252	Not Available	539	Open in IMG/M
3300010375\|Ga0105239_11573293	Not Available	760	Open in IMG/M
3300010401\|Ga0134121_10423827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1208	Open in IMG/M
3300011119\|Ga0105246_11924434	Not Available	568	Open in IMG/M
3300011119\|Ga0105246_12027312	Not Available	556	Open in IMG/M
3300012514\|Ga0157330_1014502	All Organisms → cellular organisms → Bacteria → Proteobacteria	825	Open in IMG/M
3300012899\|Ga0157299_10002544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2618	Open in IMG/M
3300012909\|Ga0157290_10058124	Not Available	1023	Open in IMG/M
3300012912\|Ga0157306_10199254	Not Available	672	Open in IMG/M
3300012948\|Ga0126375_10270986	Not Available	1162	Open in IMG/M
3300012948\|Ga0126375_11339338	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	604	Open in IMG/M
3300012971\|Ga0126369_10641982	All Organisms → cellular organisms → Bacteria → Proteobacteria	1135	Open in IMG/M
3300012984\|Ga0164309_10412592	All Organisms → cellular organisms → Bacteria → Proteobacteria	1010	Open in IMG/M
3300012986\|Ga0164304_10070451	All Organisms → cellular organisms → Bacteria → Proteobacteria	1983	Open in IMG/M
3300014324\|Ga0075352_1245015	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300014326\|Ga0157380_12068469	Not Available	632	Open in IMG/M
3300014969\|Ga0157376_10680957	All Organisms → cellular organisms → Bacteria → Proteobacteria	1032	Open in IMG/M
3300015201\|Ga0173478_10772898	Not Available	523	Open in IMG/M
3300015371\|Ga0132258_12974449	All Organisms → cellular organisms → Bacteria → Proteobacteria	1175	Open in IMG/M
3300015372\|Ga0132256_102684791	Not Available	598	Open in IMG/M
3300015373\|Ga0132257_101959937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	755	Open in IMG/M
3300015373\|Ga0132257_104050780	Not Available	533	Open in IMG/M
3300015374\|Ga0132255_101594755	All Organisms → cellular organisms → Bacteria → Proteobacteria	989	Open in IMG/M
3300016371\|Ga0182034_11659522	Not Available	562	Open in IMG/M
3300017959\|Ga0187779_11238568	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300022899\|Ga0247795_1000385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7318	Open in IMG/M
3300022901\|Ga0247788_1000225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7195	Open in IMG/M
3300023067\|Ga0247743_1000719	Not Available	3361	Open in IMG/M
3300023261\|Ga0247796_1002831	Not Available	2207	Open in IMG/M
3300025271\|Ga0207666_1065155	Not Available	585	Open in IMG/M
3300025898\|Ga0207692_10939280	All Organisms → cellular organisms → Bacteria → Proteobacteria	570	Open in IMG/M
3300025900\|Ga0207710_10185624	All Organisms → cellular organisms → Bacteria → Proteobacteria	1022	Open in IMG/M
3300025906\|Ga0207699_10999875	All Organisms → cellular organisms → Bacteria → Proteobacteria	618	Open in IMG/M
3300025907\|Ga0207645_10195326	Not Available	1330	Open in IMG/M
3300025916\|Ga0207663_10539671	All Organisms → cellular organisms → Bacteria → Proteobacteria	910	Open in IMG/M
3300025916\|Ga0207663_10581441	Not Available	878	Open in IMG/M
3300025917\|Ga0207660_10045023	Not Available	3107	Open in IMG/M
3300025925\|Ga0207650_11714940	Not Available	532	Open in IMG/M
3300025926\|Ga0207659_10500455	All Organisms → cellular organisms → Bacteria → Proteobacteria	1029	Open in IMG/M
3300025927\|Ga0207687_10387225	All Organisms → cellular organisms → Bacteria → Proteobacteria	1147	Open in IMG/M
3300025930\|Ga0207701_10043949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4141	Open in IMG/M
3300025930\|Ga0207701_10194458	Not Available	1785	Open in IMG/M
3300025933\|Ga0207706_11095034	Not Available	666	Open in IMG/M
3300025936\|Ga0207670_10704572	Not Available	836	Open in IMG/M
3300025938\|Ga0207704_10250549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1329	Open in IMG/M
3300025972\|Ga0207668_10143444	All Organisms → cellular organisms → Bacteria → Proteobacteria	1840	Open in IMG/M
3300025986\|Ga0207658_10189913	All Organisms → cellular organisms → Bacteria → Proteobacteria	1707	Open in IMG/M
3300026053\|Ga0208422_1044482	Not Available	539	Open in IMG/M
3300026089\|Ga0207648_10156162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2014	Open in IMG/M
3300026118\|Ga0207675_101222367	All Organisms → cellular organisms → Bacteria → Proteobacteria	772	Open in IMG/M
3300026121\|Ga0207683_11389849	All Organisms → cellular organisms → Bacteria → Proteobacteria	649	Open in IMG/M
3300026740\|Ga0207439_102576	Not Available	612	Open in IMG/M
3300026761\|Ga0207495_101005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	862	Open in IMG/M
3300026866\|Ga0207786_121141	Not Available	519	Open in IMG/M
3300026988\|Ga0207834_1030551	Not Available	630	Open in IMG/M
3300027427\|Ga0207472_101912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	794	Open in IMG/M
3300027695\|Ga0209966_1126005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	590	Open in IMG/M
3300027874\|Ga0209465_10097512	All Organisms → cellular organisms → Bacteria → Proteobacteria	1440	Open in IMG/M
3300027907\|Ga0207428_11078230	Not Available	562	Open in IMG/M
3300027993\|Ga0247749_1005113	Not Available	1190	Open in IMG/M
3300028811\|Ga0307292_10112100	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1080	Open in IMG/M
3300028878\|Ga0307278_10199731	Not Available	892	Open in IMG/M
3300028884\|Ga0307308_10516085	Not Available	573	Open in IMG/M
3300030844\|Ga0075377_11395749	Not Available	644	Open in IMG/M
3300031562\|Ga0310886_10290542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. JYMT SZCCT0180	930	Open in IMG/M
3300031720\|Ga0307469_11394700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	668	Open in IMG/M
3300031847\|Ga0310907_10065242	Not Available	1465	Open in IMG/M
3300031847\|Ga0310907_10183085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. JYMT SZCCT0180	988	Open in IMG/M
3300031892\|Ga0310893_10310906	All Organisms → cellular organisms → Bacteria → Proteobacteria	670	Open in IMG/M
3300031892\|Ga0310893_10545194	Not Available	525	Open in IMG/M
3300031908\|Ga0310900_10102180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1842	Open in IMG/M
3300032003\|Ga0310897_10251064	All Organisms → cellular organisms → Bacteria → Proteobacteria	792	Open in IMG/M
3300032003\|Ga0310897_10297663	Not Available	737	Open in IMG/M
3300032013\|Ga0310906_10829339	Not Available	655	Open in IMG/M
3300032017\|Ga0310899_10010443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2749	Open in IMG/M
3300032025\|Ga0318507_10284742	All Organisms → cellular organisms → Bacteria → Proteobacteria	718	Open in IMG/M
3300032066\|Ga0318514_10446349	All Organisms → cellular organisms → Bacteria → Proteobacteria	687	Open in IMG/M
3300032075\|Ga0310890_11626572	Not Available	534	Open in IMG/M
3300032174\|Ga0307470_11551727	Not Available	552	Open in IMG/M
3300032211\|Ga0310896_10863796	Not Available	522	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	66.67%
Host-Associated	Host-Associated	33.33%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.19%
Plants	Host-Associated → Plants	33.33%
Aquatic	Environmental → Aquatic	1.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.19%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.52%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.81%
Sediment	Environmental → Aquatic → Sediment	1.48%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.67%
Loam	Environmental → Terrestrial → Soil → Loam	16.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.37%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.89%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.15%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.44%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.22%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.48%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.48%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.26%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	10.37%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.37%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	8.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.15%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.15%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.44%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.44%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.70%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.22%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	8.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.15%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.44%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.70%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.70%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.22%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.96%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.48%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.48%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.48%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.48%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.48%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.48%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.74%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.74%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.74%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000041	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 old rhizosphere	Host-Associated	Open in IMG/M
3300000043	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 young rhizosphere	Host-Associated	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001430	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012514	Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.old.130510	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300014324	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300022899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S016-104C-6	Environmental	Open in IMG/M
3300022901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S156-409C-4	Environmental	Open in IMG/M
3300023067	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S221-509R-5	Environmental	Open in IMG/M
3300023261	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S166-409R-6	Environmental	Open in IMG/M
3300025271	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026053	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D1 (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026740	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A1w-12 (SPAdes)	Environmental	Open in IMG/M
3300026761	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A5-11 (SPAdes)	Environmental	Open in IMG/M
3300026866	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 76 (SPAdes)	Environmental	Open in IMG/M
3300026988	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 5 (SPAdes)	Environmental	Open in IMG/M
3300027427	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A2-11 (SPAdes)	Environmental	Open in IMG/M
3300027695	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027993	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S199-509C-5	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030844	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ARcpr5oldR_0137152	3300000041	Arabidopsis Rhizosphere	LTVWPEDDVARAICNALTMATGALVTIRDDQHLKDQDAYAIGVGYRLI*
ARcpr5yngRDRAFT_0099431	3300000043	Arabidopsis Rhizosphere	MTDIPDGLTVWPEDDVARAICNALTMATGALVTIRDDQHLKDQGAYAIGVGYRLI*
JGI11643J12802_120752551	3300000890	Soil	PQDDVARAICNALTMATGALVTVREDQHLKDQGTYAIGIGHKLD*
JGI1027J12803_1085471481	3300000955	Soil	SMNDVPDGLTVWPDDDVARAICNALTMATGALVTLREDQHLKDQGTYAVGVGYKPI*
JGI10216J12902_1045794182	3300000956	Soil	MYDVPDGLSVWPEDDVARAICNALMATGALVTVRNDQHLKDQGTYAIGIGYKLD*
JGI24032J14994_1017092	3300001430	Corn, Switchgrass And Miscanthus Rhizosphere	FKRIGWKAKRDTSVNDVPDGLTVWPEDDVARAICNALTMATGALVAVREDQHLKDQGTYAIGVGYKLI*
Ga0062593_1016625711	3300004114	Soil	ARALCNALTMATGALVTVRDDQHLKDQGTYAIGIGYRLE*
Ga0062589_1001335401	3300004156	Soil	TVWPEDDVARAICNALTMATGALVTLREDQHLKDQGTYAIGVGYKLI*
Ga0062589_1026771151	3300004156	Soil	KAKRDVSMNDIPDGLSVWPQDDVARAICNALTMATGALVTVREDQHLKDQGTYAIGIGHKLD*
Ga0063356_1004659044	3300004463	Arabidopsis Thaliana Rhizosphere	TVWPEDDVARAICNALTMATGALVTLREDQHLKDQGTYAIGVGYKQI*
Ga0062592_1008579031	3300004480	Soil	TVWPEDDVARAICNALTMATGALVAVREDQHLKDQGTYAIGVGYKLI*
Ga0062594_1011997031	3300005093	Soil	VWPEDDVARAICNALTMATGALVTLREDQHLKDQGTYAIGVGYKLT*
Ga0070670_1001690213	3300005331	Switchgrass Rhizosphere	DGLSVWPEDDVARAICNALTMATGALVTLRKDQQLKDQGVYAIGIGYRLE*
Ga0066388_1004231041	3300005332	Tropical Forest Soil	DGLSVWPEDDVARAICNALTMATGALVTLRKDQQLKDQGAYAIGIGYKLD*
Ga0066388_1027411401	3300005332	Tropical Forest Soil	PEDDVARAICNALMMATGALVTLREDQHLKSQGTYAIGIGYKPG*
Ga0066388_1036269463	3300005332	Tropical Forest Soil	AKRDTSVNDVPDGLSVWPDDDVARAISDALTMATGALVTLRRDQHPKDQGTYVVGIGYKLE*
Ga0066388_1051324052	3300005332	Tropical Forest Soil	NDIPDGLTVWPEDDVARTICNALTMATGALVTLRESQHLKDQGTYAIGVGYRPV*
Ga0066388_1054221602	3300005332	Tropical Forest Soil	NRIGWKAKRDTTMSEVPDGLSVWPEDDVARAICNALTMATGALVTLRKDQQLKDQGAYAIGIGYKLD*
Ga0066388_1071688211	3300005332	Tropical Forest Soil	VARAICNALTMATGALVTVRENRLLNDQGTYAIGIGYKPN*
Ga0066388_1080600611	3300005332	Tropical Forest Soil	GLSVWPEDDVARAICNALTMATGALVTLRKDQQLKDQGAYAIGIGYRLD*
Ga0070680_1003131361	3300005336	Corn Rhizosphere	LTVWPEDDVARAICNALTTATGALVTLREDRQLKDQGTYAIAIGYKLD*
Ga0070668_1003422283	3300005347	Switchgrass Rhizosphere	PDGLSVWPEDDVARAICNALTMATGALVTLRKDQQLKDQGVYAIGIGYRLE*
Ga0070669_1010854421	3300005353	Switchgrass Rhizosphere	PEDDVARAICNALTMATGALVTIRDDQNLKDQGAYAIGVGYRLI*
Ga0070711_1008404031	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	WPEDDVARAICNALTMATGALVTLRKDQQLKDQGVYAIGIGYKLD*
Ga0070663_1006221641	3300005455	Corn Rhizosphere	MTDIPDGLTVWPEDDVARAICNALTMATGALVTIRDDQNLKDQGAYAIGVGYRLI*
Ga0070678_1012198821	3300005456	Miscanthus Rhizosphere	EVPDGLSVWPEDDVARAICNALTMATGELVTLRKDQQLKDQGVYAIGIGYKLD*
Ga0070707_1004971841	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	DVARAICNALTMATGALVAVREDQHLKDQGTYAIGVGYKLI*
Ga0070696_1012876362	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	TVWPEDDVARAICNALTTATGALVTLREDRQLKDQGTYAIAIGYKLD*
Ga0070704_1009064191	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	SMNDIPDGLSVWPQDDVARALCNALTMATGALVTVRDDQHLKDQGTYAIGIGYRLE*
Ga0068859_1029179882	3300005617	Switchgrass Rhizosphere	VDAFKRIGWTAKRGTGMTDIPDGLTVWPEDDVARAICNALTMATGALVTIRDDQNLKDQGAYAIGVGYRLI*
Ga0068861_1007338972	3300005719	Switchgrass Rhizosphere	DDVARAICNALTMATGALVTLRKDQQLKDQGVYAIGIGYRLE*
Ga0066903_1016785382	3300005764	Tropical Forest Soil	TSMSDIPDGLSVWPEDDVARAICNALTMATGALVMLREDQHLKDQGTYAIGIGYKLD*
Ga0068851_100510893	3300005834	Corn Rhizosphere	DVPDGLTVWPEDDVARAICNALTMATGALVAVREDQHLKDQGTYAIGVGYKLI*
Ga0068870_106409302	3300005840	Miscanthus Rhizosphere	AICNALTMATGALVTLRKDQQLKDQGVYAIGIGYRLE*
Ga0068863_1007882652	3300005841	Switchgrass Rhizosphere	SVWPEDDVARAICNALTMATGALVTLRKDQQLKDQGVYAIGIGYKLD*
Ga0068858_1005452701	3300005842	Switchgrass Rhizosphere	GWKAKRDTSMSEVPDGLSVWPEDDVARAICNALTMATGALVTLRKDQQLKDQGVYAIGIGYKLD*
Ga0075026_1005832351	3300006057	Watersheds	AFKRIGWKAKRDTSMNDVPDGLSVWPQDNVARAICNALMMATGALVTLREDQHLKDQGTYAIGIGYKLD*
Ga0075026_1008447163	3300006057	Watersheds	GWKAKRDTSMNEVPDGLSVWPEDDVARAICNALTMATGALVTLRKDQHLKDQGVYAIGIGYKLD*
Ga0075432_104557072	3300006058	Populus Rhizosphere	TSMYDVPDGLSVWPEDDVARAICNALMATGELVTVRNDQHLKDQGTYAIGIGYKLD*
Ga0079220_104563393	3300006806	Agricultural Soil	ALTMATGALVTLRENGHLDDRVNGQGTYTIGIGYRPN*
Ga0075428_1011273582	3300006844	Populus Rhizosphere	SVWPEDDVARAICNALTMATGALVTLRNDQQLKDQGTYAIGIGYKLD*
Ga0075425_1025112791	3300006854	Populus Rhizosphere	TSLNEVPDGLSVWPNDDVARAICNALMKATGALVIVREDQHLKDQGAYAIGIGYRPD*
Ga0068865_1015562962	3300006881	Miscanthus Rhizosphere	GLSVWPEDDVARAICNALTMATGALVTLRKDQQLKDQGVYAIGIGYKLD*
Ga0075424_1008566772	3300006904	Populus Rhizosphere	DGLSVWPEDDVARAICNALTMATGALVTLRKDQQLKDQGVYAIGIGYKLD*
Ga0105243_123601201	3300009148	Miscanthus Rhizosphere	NEVPDGLSVWPEDEVARAICNALTMATGALVTLRKDQQLKDQGVYAIGIGYKLD*
Ga0105241_100479554	3300009174	Corn Rhizosphere	KAKRDTSMSEVPDGLSVWPEDDVARAICNALTMATGALVTLRKDQQLKDQGVYAIGIGYRLE*
Ga0126380_101914511	3300010043	Tropical Forest Soil	VWPEDDVARAICNALTMATGALVTLRKDQQLKDQGAYAIGIGYRLD*
Ga0126380_110625502	3300010043	Tropical Forest Soil	GWKAKRDANMNEVPDGLSVWPEDDVARAICNALTMATGALVTLRKDQQLKDQGAYAIGIGYKLD*
Ga0126382_110027412	3300010047	Tropical Forest Soil	DAFKRIGWKARRDTSVNELPDGLTVWPEDDVARAICNALTMATGALVTLRNDQQLKDQGTYAIGIGYKLD*
Ga0126382_120764832	3300010047	Tropical Forest Soil	LSVWPEDDVARAISNALTMATGALVTLRKDQQLKDQGAYAIGIGYKLD*
Ga0126378_111834221	3300010361	Tropical Forest Soil	IPDVLSVGPEDDVARAICNALTMATGMLVTLRKDQHLKDQGTYAIGIGYKLD*
Ga0126377_131790511	3300010362	Tropical Forest Soil	GLSVWPEDDVARAICNALTMATGALVTLRKDQQLKDQGVYAIGIGYRLD*
Ga0126379_100105761	3300010366	Tropical Forest Soil	RIGWNAKRDTSVNDVPDGLSVWPDDDVARAICNALTMATGALVTLRKDQHLKDQGTYAVGIGYKLD*
Ga0126379_105914891	3300010366	Tropical Forest Soil	NRIGWKAKRDTTMSEVPDGLSVWPEDDVARAICNALTMATGALVTLRKDQQLKDQGAYAIGIGYRLD*
Ga0134128_105464151	3300010373	Terrestrial Soil	RAICNALTMATGALVTLRKDQQLKDQGVYAIGIGYRLE*
Ga0134128_127812521	3300010373	Terrestrial Soil	MNDIPDGLSVWPQDDVARALCNALTMATGALVTVRDDQHLKDQ
Ga0105239_115732931	3300010375	Corn Rhizosphere	AKRDVSMNDIPDGLSVWPQDDVARAICNALMMATGALVTVREDQHLKDQGTYAIGIGHKLN*
Ga0134121_104238271	3300010401	Terrestrial Soil	KRDTSMSEVPDGLSVWPEDDVARAICNALTMATGALVTLRKDQQLKDQGVYAIGIGYKLD
Ga0105246_119244341	3300011119	Miscanthus Rhizosphere	KRETSMNDIPDGLSVWPQDDVARALCNALTMATGALVTVRDDQHLKDQGTYAIGIGYRLE
Ga0105246_120273122	3300011119	Miscanthus Rhizosphere	TVWPEDDVARAICNALTMATGALVTLREDRQLKDQGTYAIAIGYKLD*
Ga0157330_10145023	3300012514	Soil	CNALTMATGALVTLRKDQQLKDQGVYAIGIGYKLD*
Ga0157299_100025441	3300012899	Soil	EDDVARAICNALTMATGALVAVREDQHLKDQGTYAIGVGYKLI*
Ga0157290_100581241	3300012909	Soil	DDVARAICNALTMATGALVAVREDQHLKDQGTYAIGVGYKLI*
Ga0157306_101992542	3300012912	Soil	NDIPDGLSVWPQDDVARAICNALMMATGALVTIREDQHLKDQGTYAIGIGHKLN*
Ga0126375_102709861	3300012948	Tropical Forest Soil	RAICNALMMATGALVTVRNDQHLKDQGTYAIGIGYKLD*
Ga0126375_113393382	3300012948	Tropical Forest Soil	PEDDVARAICNALTMATGALVTLRNDQHLKEQGTYAIGIGYKLD*
Ga0126369_106419822	3300012971	Tropical Forest Soil	VDAFNRIGWKATRDTNMVEVPDGLSVWPEDDVARAICNALTMATGALVTLRKDQHLKEQGAYAIGIGYKLD*
Ga0164309_104125923	3300012984	Soil	NRIGWKAKRDTTMSEVPDGLSVWPEDDVARAICNALTMATGALVTLRKDQQLKDQGVYAIGIGYKLD*
Ga0164304_100704514	3300012986	Soil	RIGWKAKRDTSMSEVPDGLSVWPEDDVARAICNALTMATGALVTLRKDQQLKDQGAYAIGIGYKLD*
Ga0075352_12450151	3300014324	Natural And Restored Wetlands	FKRIGWKAKRDTSMNDIPDGLTVWPEDDVARAISNALTMATGALVTLREDQHLKGQGTYAIGIGYKPD*
Ga0157380_120684692	3300014326	Switchgrass Rhizosphere	WPQDDVARALCNALTMATGALVTVRDDQHLKDQGTYAIGIGYRLE*
Ga0157376_106809572	3300014969	Miscanthus Rhizosphere	VDALNRIGWKAKRDTSMSEVPDGLSVWPEDDVARAICNALTMATGALVTLRKDQQLKDQGVYAIGIGYKLD*
Ga0173478_107728982	3300015201	Soil	EDDVARAICNALTMATGALVAVREDQHLKDQGTYAIGVGYKQI*
Ga0132258_129744492	3300015371	Arabidopsis Rhizosphere	ASKNEVPDGLSVWPDDDVARAICNALMMATGAVVTVREDQHLKDQGAYAIGIGNKPD*
Ga0132256_1026847911	3300015372	Arabidopsis Rhizosphere	SEVPDGLSVWPEDDVARAICNALTMATGALVTLRKDQQLKDQGVYAIGIGYKLD*
Ga0132257_1019599371	3300015373	Arabidopsis Rhizosphere	VARAICNALTMATGALVTPRKDQQLKDQGVYAIGIGYRLE*
Ga0132257_1040507801	3300015373	Arabidopsis Rhizosphere	AICNALMMATGALVTVREDQHLKDQGTYAIGIGHKLD*
Ga0132255_1015947551	3300015374	Arabidopsis Rhizosphere	AKRDTGMSEVPDGLSVWPEDDVARAICNALTMATGALVTLRKDQQLKDQGVYAIGIGYKLD*
Ga0182034_116595221	3300016371	Soil	RAICNALTMATGALVTLRKDEHLKDQGTYTIGIGYKLG
Ga0187779_112385682	3300017959	Tropical Peatland	DASTNGIPDGISVWPDDDVARAISNALMMATGAVVTVREDQHLKDQGNYAIGIGNKPD
Ga0247795_10003851	3300022899	Soil	WKAKRDVSMNDIPDGLSVWPQDDVARAICNALMMATGALVTIREDQHLKDQGTYAIGIGHKLN
Ga0247788_10002251	3300022901	Soil	TEDDVARAICNALTMATGALVAVREDQHLKDQGTYAIGVGYKLI
Ga0247743_10007197	3300023067	Soil	SVWPQDDVARAICNALMMATGALVTIREDQHLKDQGTYAIGIGHKLN
Ga0247796_10028316	3300023261	Soil	DGLSVWPQDDVARAICNALMMATGALVTIREDQHLKDQGTYAIGIGHKLN
Ga0207666_10651552	3300025271	Corn, Switchgrass And Miscanthus Rhizosphere	IGWKAQRDTSMNDIPDGLTVWPEDDVARAICNALTMATGALVTLREDRQLKDQGTYAIAIGYKLD
Ga0207692_109392802	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	SVWPEDDVARAICNALTMATGALVTLRKDQQLKDQGAYAIGIGYKLD
Ga0207710_101856242	3300025900	Switchgrass Rhizosphere	EVPDGLSVWPEDDVARAICNALTMATGALVTLRKDQQLKDQGVYAIGIGYKLD
Ga0207699_109998752	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	AICNALTMATGALVTLRKDQQLKDQGVYAIGIGYKLD
Ga0207645_101953262	3300025907	Miscanthus Rhizosphere	KRGTSMTDIPDGLTVWPEDDVARAICNALTMATGALVTIRDDQNLKDQGAYAIGVGYRLI
Ga0207663_105396711	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	DALNRIGWKAKRDTSMSEVPDGLSVWPEDDVARAICNALTMATGALVTLRKDQQLKDQGVYAIGIGYKLD
Ga0207663_105814411	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	KAKRDMSMNDVPDGLSVWPKDDLARAICNALMMATGALVTVREDQHLKDQGTYVIGIGYKMD
Ga0207660_100450231	3300025917	Corn Rhizosphere	GWKAKRDVSMNDIPDGLSVWPHDDVARAICNALMMATGALVTVREDQHLKDQGTYAIGIGHKLN
Ga0207650_117149401	3300025925	Switchgrass Rhizosphere	GWKAKRDTSMSEVPDGLSVWPEDDVARAICNALTMATGALVTLRKDQQLKDQGVYAIGIGYRLE
Ga0207659_105004552	3300025926	Miscanthus Rhizosphere	AKRDTTMSEVPDGLSVWPEDDVARAICNALTMATGALVTLRKDQQLKDQGAYAIGIGYKL
Ga0207687_103872252	3300025927	Miscanthus Rhizosphere	ARAICNALTMATGALVTLRKDQQLKDQGVYAIGIGYKLD
Ga0207701_100439492	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MNDIPDGLSVWPQDDVARALCNALTMATGALVTVRDDQHLKDQGTYAIGIGYRLE
Ga0207701_101944581	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	AFKRIGWTAKRGTGMTDIPDGLTVWPEDDVARAICNALTMATGALVTIRDDQNLKDQGAYAIGVGYRLI
Ga0207706_110950342	3300025933	Corn Rhizosphere	WPQDDVARALCNALTMATGALVTVRDDQHLKDQGTYAIGIGYRLE
Ga0207670_107045723	3300025936	Switchgrass Rhizosphere	SMNDIPDGLTVWPEDDVARAICNALTMATGALVTLREDRQLKDQGTYAIAIGYKLD
Ga0207704_102505491	3300025938	Miscanthus Rhizosphere	SISEVPDGLSVWPEDDVARAICNALTMATGALVTLRKDQQLKDQGVYAIGIGYRLE
Ga0207668_101434444	3300025972	Switchgrass Rhizosphere	SEVPDGLSVWPEDDVARAICNALTMATGALVTLRKDQQLKDQGVYAIGIGYKLD
Ga0207658_101899133	3300025986	Switchgrass Rhizosphere	ARAICNALTMATGALVTLRKDQQLKDLGVYAIGIGYKLD
Ga0208422_10444822	3300026053	Natural And Restored Wetlands	IPDGLTVWPEDDVARGICNALTMATGALVTLREDQHLKDQGTYAIGIGYKPD
Ga0207648_101561621	3300026089	Miscanthus Rhizosphere	MSEVPDGLSVWPEDDVARAICNALTMATGALVTLRKDQQLKDQGVYAIGIGYKLD
Ga0207675_1012223672	3300026118	Switchgrass Rhizosphere	VPDGLSVWPEDDVARAICNALTMATGALVTLRKDQQLKDQGVYAIGIGYKLD
Ga0207683_113898492	3300026121	Miscanthus Rhizosphere	TSMNEVPDGLSVWPEDDVARAICNALTMATGELVTLRKDQQLKDQGVYAIGIGYKLD
Ga0207439_1025762	3300026740	Soil	NDIPDGLSVWPQDDVARAICNALMMATGALVTIREDQHLKDQGTYAIGIGHKLN
Ga0207495_1010052	3300026761	Soil	EDDVARAICNALTMATGALVAVREDQHLKDQGTYAIGVGYKLI
Ga0207786_1211412	3300026866	Tropical Forest Soil	CNALTMATGAVVMVREDQRLKDQGTYAIGVGYKLD
Ga0207834_10305512	3300026988	Tropical Forest Soil	ICNALTMATGAVVMVREDQRLKDQGTYAIGVGYKLD
Ga0207472_1019121	3300027427	Soil	AFKRIGWKAKRDTSVNDVPDGLTVWPEDDVARAICNALTMATGALVAVREDQHLKDQGTYAIGVGYKLI
Ga0209966_11260052	3300027695	Arabidopsis Thaliana Rhizosphere	SVNDVPDGLTVWPEDDVARAICNALTMATGALVAVREDQHLKDQGTYAIGVGYKLI
Ga0209465_100975121	3300027874	Tropical Forest Soil	IGWKAKRDTTMSEVPDGLSVWPEDDVARAICNALTMATGALVTLRKDQQLKDQGAYAIGIGYRLD
Ga0207428_110782301	3300027907	Populus Rhizosphere	TSMYDVPDGLSVWPEDDVARAICNALMATGELVTVRNDQHLKDQGTYAIGIGYKLD
Ga0247749_10051131	3300027993	Soil	GWKAKRDVSMNDIPDGLSVWPHDDVARAICNALMMATGALVTIREDQHLKDQGTYAIGIGHKLN
Ga0307292_101121001	3300028811	Soil	DDVARAISNALTMATGVMVTLRKDQHLKDQGVYAIGIGYKLD
Ga0307278_101997311	3300028878	Soil	DGLSVWPEDDVARAICNALTMATGALVTLRKDQHLKDQGMYAIGIGYRLD
Ga0307308_105160851	3300028884	Soil	AISNALTMATGVMVTLRKDQHLKDQGVYAIGIGYKLD
Ga0075377_113957491	3300030844	Soil	MNDIPDGLSVWPKDDVARAICNALMMATGALVTVREDQHLKDKGTYAIGIGHK
Ga0310886_102905421	3300031562	Soil	HDDVARAICNALMMATGALVTVREDQHLKDQGTYAIGIGHKLD
Ga0307469_113947001	3300031720	Hardwood Forest Soil	PDGLSVWPKDDVARAICNALMMATGALVTVREDQHLKDQGTYAIGIGYKMD
Ga0310907_100652421	3300031847	Soil	KAKRDVSMSDIPDGLSVWPHDDVARAICNALMMATGALVTVREDQHLKDQGTYAIGIGHKLN
Ga0310907_101830853	3300031847	Soil	GLSVWPHDDVARAICNALMMATGALVTVREDQHLKDQGTYAIGIGHKLD
Ga0310893_103109062	3300031892	Soil	MNEVPDGLSVWPEDDVARAICNALTMATGALVTLRKDQQLKDQGVYAIGIGYKLD
Ga0310893_105451941	3300031892	Soil	FKRIGWKAKRDVSMNDIPDGLSIWPHDDVARAICNALMMATGALVTVREDQHLKDQGTYAIGIGHKLN
Ga0310900_101021801	3300031908	Soil	AKRDTSMNEVPDGLSVWPEDDVARAICNALTMATGALVTLRKDQQLKDQGVYAIGIGYKL
Ga0310897_102510643	3300032003	Soil	GLSVWPEDDVARAICNALTMATGALVTLRKDQQLKDQGVYAIGIGYKLD
Ga0310897_102976633	3300032003	Soil	MNDIPDGLSVWPHDDVARAICNALMMATGALVTVREDQHLKDQGTYAIGIGH
Ga0310906_108293391	3300032013	Soil	ICNALMMATGALVTVREDQHLKDQGTYAIGIGHKLN
Ga0310899_100104431	3300032017	Soil	VDAFKRIGWKAQRDTSMNDIPDGLTVWPEDDVARAICNALTMATGALVTLREDRQLKDQGTYAIAIGYKLD
Ga0318507_102847422	3300032025	Soil	WKATRDTNMVEVPDGLSVWPEDDVARAICNALTMATGALVTLRKDQHLKEQGAYAIGIGYKLD
Ga0318514_104463492	3300032066	Soil	TNMVEVPDGLSVWPEDDVARAICNALTMATGALVTLRKDQHLKEQGAYAIGIGYKLD
Ga0310890_116265721	3300032075	Soil	GMTDIPDGLTVWPEDDVARAICNALTMATGALVTIRDDQHLKDQGAYAIGVGYRLI
Ga0307470_115517271	3300032174	Hardwood Forest Soil	KAKRDTSMNDIPDGLTVCPEDDVARAICNALMMATGALVTLRDDQHLKGQGTYAIGIGYKPH
Ga0310896_108637961	3300032211	Soil	KRDVSMNDIPDGLSVWPHDDVARAICNALMMATGALVTVREDQHLKDQGTYAIGIGHKLD

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F058528

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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