Metagenome Family F058523

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F058523
Family Type	Metagenome
Number of Sequences	135
Average Sequence Length	99 residues
Representative Sequence	MTKYLISLPDYQERMRKSATMTAADRIAQLENDPKAAAILKQNSLTARDYLVGVPALRMALMAAQGATAPNVVASPANVAFAKANLAQLKPKMDAADGIRR
Number of Associated Samples	102
Number of Associated Scaffolds	135

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.54 %
% of genes near scaffold ends (potentially truncated)	80.00 %
% of genes from short scaffolds (< 2000 bps)	80.74 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.63

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (80.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (11.111 % of family members)
Environment Ontology (ENVO)	Unclassified (40.741 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (65.926 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.59% β-sheet: 0.00% Coil/Unstructured: 43.41%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.63
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.63
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 135 Family Scaffolds
PF02494	HYR	4.44
PF08327	AHSA1	2.96
PF12681	Glyoxalase_2	2.96
PF01965	DJ-1_PfpI	2.22
PF00484	Pro_CA	2.22
PF12867	DinB_2	2.22
PF01964	ThiC_Rad_SAM	1.48
PF13911	AhpC-TSA_2	1.48
PF12680	SnoaL_2	1.48
PF02687	FtsX	1.48
PF13560	HTH_31	0.74
PF04828	GFA	0.74
PF13709	DUF4159	0.74
PF12704	MacB_PCD	0.74
PF12276	DUF3617	0.74
PF12697	Abhydrolase_6	0.74
PF00441	Acyl-CoA_dh_1	0.74
PF04028	DUF374	0.74
PF02894	GFO_IDH_MocA_C	0.74
PF06439	3keto-disac_hyd	0.74
PF07885	Ion_trans_2	0.74
PF13671	AAA_33	0.74
PF01546	Peptidase_M20	0.74
PF05721	PhyH	0.74
PF13472	Lipase_GDSL_2	0.74
PF00903	Glyoxalase	0.74
PF00534	Glycos_transf_1	0.74
PF03551	PadR	0.74
PF13783	DUF4177	0.74
PF00795	CN_hydrolase	0.74
PF10755	DUF2585	0.74
PF00106	adh_short	0.74

COG ID	Name	Functional Category	% Frequency in 135 Family Scaffolds
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	2.22
COG0422	4-amino-2-methyl-5-hydroxymethylpyrimidine (HMP) synthase ThiC	Coenzyme transport and metabolism [H]	1.48
COG0673	Predicted dehydrogenase	General function prediction only [R]	0.74
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.74
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.74
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.74
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.74
COG2121	Uncharacterized conserved protein, lysophospholipid acyltransferase (LPLAT) superfamily	Function unknown [S]	0.74
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.74
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.74

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	80.00 %
Unclassified	root	N/A	20.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	80.00 %
Unclassified	root	N/A	20.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	80.00 %
Unclassified	root	N/A	20.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	50.37 %
Unclassified	root	N/A	20.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.93 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.48 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	45.19 %
Unclassified	root	N/A	20.00 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4.44 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.48 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1.48 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	45.19 %
Unclassified	root	N/A	20.00 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.70 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.48 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.74 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	45.19 %
Unclassified	root	N/A	20.00 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.48 %
Brucellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Brucellaceae	1.48 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.74 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	45.19 %
Unclassified	root	N/A	20.00 %
Brucella/Ochrobactrum group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Brucellaceae → Brucella/Ochrobactrum group	1.48 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.48 %
Komagataeibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Komagataeibacter	0.74 %
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	0.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	45.19 %
Unclassified	root	N/A	20.00 %
Brucella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Brucellaceae → Brucella/Ochrobactrum group → Brucella	1.48 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.48 %
Komagataeibacter xylinus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Komagataeibacter → Komagataeibacter xylinus	0.74 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	45.19 %
Unclassified	root	N/A	20.00 %
Brucella inopinata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Brucellaceae → Brucella/Ochrobactrum group → Brucella → Brucella inopinata	1.48 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.48 %
Komagataeibacter xylinus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Komagataeibacter → Komagataeibacter xylinus	0.74 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459006\|GBPF9FW02JJIN6	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300001431\|F14TB_102572846	All Organisms → cellular organisms → Bacteria	1350	Open in IMG/M
3300004114\|Ga0062593_100102138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2026	Open in IMG/M
3300004156\|Ga0062589_100381794	All Organisms → cellular organisms → Bacteria	1134	Open in IMG/M
3300004157\|Ga0062590_100975844	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300004157\|Ga0062590_101352002	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300004157\|Ga0062590_101885110	All Organisms → cellular organisms → Bacteria → Proteobacteria	616	Open in IMG/M
3300004480\|Ga0062592_102256984	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300005093\|Ga0062594_100092136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1771	Open in IMG/M
3300005293\|Ga0065715_10091531	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5721	Open in IMG/M
3300005295\|Ga0065707_11132739	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300005347\|Ga0070668_102002739	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300005353\|Ga0070669_100103039	All Organisms → cellular organisms → Bacteria	2156	Open in IMG/M
3300005353\|Ga0070669_100324519	All Organisms → cellular organisms → Bacteria	1244	Open in IMG/M
3300005354\|Ga0070675_101651024	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300005354\|Ga0070675_101752187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Komagataeibacter → Komagataeibacter xylinus	573	Open in IMG/M
3300005354\|Ga0070675_102042269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Brucellaceae → Brucella/Ochrobactrum group → Brucella → Brucella inopinata	528	Open in IMG/M
3300005356\|Ga0070674_100657994	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300005365\|Ga0070688_101199658	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300005365\|Ga0070688_101637499	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300005367\|Ga0070667_101257011	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300005436\|Ga0070713_100818766	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300005440\|Ga0070705_100864876	Not Available	724	Open in IMG/M
3300005441\|Ga0070700_101359955	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	599	Open in IMG/M
3300005444\|Ga0070694_100085536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2202	Open in IMG/M
3300005444\|Ga0070694_100343277	All Organisms → cellular organisms → Bacteria	1155	Open in IMG/M
3300005458\|Ga0070681_10634106	Not Available	983	Open in IMG/M
3300005535\|Ga0070684_100954411	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300005544\|Ga0070686_100240759	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1317	Open in IMG/M
3300005544\|Ga0070686_100673191	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	823	Open in IMG/M
3300005545\|Ga0070695_101518323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Brucellaceae → Brucella/Ochrobactrum group → Brucella → Brucella inopinata	558	Open in IMG/M
3300005546\|Ga0070696_101851885	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300005578\|Ga0068854_101921004	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300005617\|Ga0068859_101355751	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300005764\|Ga0066903_100004009	All Organisms → cellular organisms → Bacteria	12272	Open in IMG/M
3300005764\|Ga0066903_105570628	Not Available	663	Open in IMG/M
3300005841\|Ga0068863_102721350	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300005842\|Ga0068858_101830698	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300005844\|Ga0068862_100468732	All Organisms → cellular organisms → Bacteria	1190	Open in IMG/M
3300005937\|Ga0081455_10743108	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300006845\|Ga0075421_101549285	All Organisms → cellular organisms → Bacteria → Proteobacteria	723	Open in IMG/M
3300006854\|Ga0075425_101306482	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300006904\|Ga0075424_102050898	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	603	Open in IMG/M
3300006904\|Ga0075424_102763394	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300009100\|Ga0075418_12140033	Not Available	610	Open in IMG/M
3300009162\|Ga0075423_10158462	All Organisms → cellular organisms → Bacteria → Acidobacteria	2377	Open in IMG/M
3300009174\|Ga0105241_10663085	All Organisms → cellular organisms → Bacteria	949	Open in IMG/M
3300009176\|Ga0105242_10837221	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	914	Open in IMG/M
3300009176\|Ga0105242_12843954	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300009177\|Ga0105248_11678725	All Organisms → cellular organisms → Bacteria → Acidobacteria	720	Open in IMG/M
3300010047\|Ga0126382_11136379	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	695	Open in IMG/M
3300010362\|Ga0126377_10122180	All Organisms → cellular organisms → Bacteria	2408	Open in IMG/M
3300010391\|Ga0136847_13168837	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	728	Open in IMG/M
3300010399\|Ga0134127_11939626	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	666	Open in IMG/M
3300010399\|Ga0134127_12931557	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300010399\|Ga0134127_12993323	Not Available	551	Open in IMG/M
3300011402\|Ga0137356_1064120	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696	Open in IMG/M
3300011439\|Ga0137432_1033646	All Organisms → cellular organisms → Bacteria	1515	Open in IMG/M
3300012189\|Ga0137388_10744978	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	909	Open in IMG/M
3300012189\|Ga0137388_11904631	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300012212\|Ga0150985_111158227	Not Available	714	Open in IMG/M
3300012683\|Ga0137398_10313515	All Organisms → cellular organisms → Bacteria	1056	Open in IMG/M
3300012904\|Ga0157282_10228043	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300012930\|Ga0137407_12363479	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300012951\|Ga0164300_10893503	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300012971\|Ga0126369_10721761	All Organisms → cellular organisms → Bacteria	1075	Open in IMG/M
3300012971\|Ga0126369_11228993	Not Available	839	Open in IMG/M
3300013297\|Ga0157378_12941893	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300014325\|Ga0163163_12069596	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629	Open in IMG/M
3300014326\|Ga0157380_11154211	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	816	Open in IMG/M
3300014326\|Ga0157380_12135495	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300014745\|Ga0157377_10345316	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	997	Open in IMG/M
3300014745\|Ga0157377_11316529	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300015077\|Ga0173483_10604823	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300015371\|Ga0132258_10122979	All Organisms → cellular organisms → Bacteria → Acidobacteria	6170	Open in IMG/M
3300015371\|Ga0132258_11382466	All Organisms → cellular organisms → Bacteria → Acidobacteria	1779	Open in IMG/M
3300015371\|Ga0132258_13332088	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1105	Open in IMG/M
3300015374\|Ga0132255_100984206	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1264	Open in IMG/M
3300015374\|Ga0132255_101673884	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	965	Open in IMG/M
3300015374\|Ga0132255_101742332	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	946	Open in IMG/M
3300015374\|Ga0132255_103734158	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	647	Open in IMG/M
3300017659\|Ga0134083_10571644	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300017792\|Ga0163161_11427159	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300017939\|Ga0187775_10329539	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	611	Open in IMG/M
3300018060\|Ga0187765_10069873	All Organisms → cellular organisms → Bacteria	1853	Open in IMG/M
3300018072\|Ga0184635_10184862	All Organisms → cellular organisms → Bacteria → Acidobacteria	832	Open in IMG/M
3300018084\|Ga0184629_10430158	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	692	Open in IMG/M
3300018476\|Ga0190274_13742816	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300021082\|Ga0210380_10493148	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300021082\|Ga0210380_10543082	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300022756\|Ga0222622_10212288	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1291	Open in IMG/M
3300023073\|Ga0247744_1071487	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300025918\|Ga0207662_10879943	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	634	Open in IMG/M
3300025926\|Ga0207659_11393358	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300025926\|Ga0207659_11553071	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300025934\|Ga0207686_11487081	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300025935\|Ga0207709_10459535	Not Available	986	Open in IMG/M
3300025937\|Ga0207669_10649293	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	863	Open in IMG/M
3300025938\|Ga0207704_10945222	Not Available	727	Open in IMG/M
3300025986\|Ga0207658_10918765	Not Available	797	Open in IMG/M
3300026035\|Ga0207703_11673711	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300026075\|Ga0207708_11040851	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	712	Open in IMG/M
3300026075\|Ga0207708_11532624	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300026089\|Ga0207648_11000157	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	783	Open in IMG/M
3300026118\|Ga0207675_101305552	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	746	Open in IMG/M
3300026118\|Ga0207675_101387158	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	723	Open in IMG/M
3300026557\|Ga0179587_10312124	All Organisms → cellular organisms → Bacteria	1015	Open in IMG/M
3300027533\|Ga0208185_1062481	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	889	Open in IMG/M
3300027875\|Ga0209283_10285854	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1090	Open in IMG/M
3300031198\|Ga0307500_10282490	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300031858\|Ga0310892_10039530	All Organisms → cellular organisms → Bacteria	2260	Open in IMG/M
3300031908\|Ga0310900_11706537	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300032000\|Ga0310903_10330068	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	758	Open in IMG/M
3300032003\|Ga0310897_10255070	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	787	Open in IMG/M
3300032075\|Ga0310890_11617455	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300032782\|Ga0335082_10192291	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1944	Open in IMG/M
3300032828\|Ga0335080_11941343	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571	Open in IMG/M
3300033811\|Ga0364924_045795	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	925	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	56.30%
Host-Associated	Host-Associated	43.70%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	48.89%
Plants	Host-Associated → Plants	43.70%
Aquatic	Environmental → Aquatic	7.41%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	48.15%
Rhizosphere	Host-Associated → Plants → Rhizosphere	24.44%
Rhizoplane	Host-Associated → Plants → Rhizoplane	18.52%
Sediment	Environmental → Aquatic → Sediment	4.44%
Freshwater	Environmental → Aquatic → Freshwater	2.96%
Floodplain	Environmental → Terrestrial → Floodplain	0.74%
Roots	Host-Associated → Plants → Roots	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	26.67%
Loam	Environmental → Terrestrial → Soil → Loam	18.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.07%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.37%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.37%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	8.15%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.44%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.96%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.48%
Lake	Environmental → Aquatic → Freshwater → Lake	1.48%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.74%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.74%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	16.30%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.07%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.37%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.37%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	8.15%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.44%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.44%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.96%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.48%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.48%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.74%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.74%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.74%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.74%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.11%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	6.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	6.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.19%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.19%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	5.19%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.44%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.70%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.70%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.22%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.22%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.22%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.96%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.48%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	1.48%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.48%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.48%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.48%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.48%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.74%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.74%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.74%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.74%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.74%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459006	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 0-10cm	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011402	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT830_2	Environmental	Open in IMG/M
3300011439	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300023073	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S154-409C-5	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027533	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033811	Sediment microbial communities from East River floodplain, Colorado, United States - 28_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
L01_06742590	2170459006	Grass Soil	RMTKYLVSLPNFQDRLLDSMKMTAAERRAQLESDPKAMAILKAHGLTAQDYLVGVPSLRMALMAAQAPADTPNLAVSPANLAFAKANVAQLKPKMDAADGVKPIKKVER
F14TB_1025728464	3300001431	Soil	KSTKMTPAERREQLEKDPKAMAILKQNSLTAQEYIVGVPALRMAMMVAEGLPTGPRIIASPANVAFAKANLAELKSKMEAAEGIAAKK*
Ga0062593_1001021382	3300004114	Soil	MRKSATMTAADRIAQLESDPKAAAILKQNSLTARDYLIGVPALRMALMAAQGATAPNIVASPANLAFAKANLAQLKPKMDAADGIRR*
Ga0062589_1003817941	3300004156	Soil	LPRANQLIKAMDAMTKYLVSLPDYQNRLVRSMKMTPAERRAQFEKDPKAMAIVKQNSLTSQDYLVGVPALRMALMAAQGLASSPNVIASPANVAFAKANLSELKPKMDAADGVAGRK*
Ga0062590_1009758441	3300004157	Soil	LPDYQNRLVRSMKMTPAERRAQFEKDPKAMAIVKQNSLTSQDYLVGVPALRMALMAAQGLASSPNVIASPANVAFAKANLSELKPKMDAADGVAGRK*
Ga0062590_1013520021	3300004157	Soil	PDYLQRVGESAKLPAAEQAARMEKDPKISSILKENGLTARDYIVGVPTLRMALMAAQGLSTPNIVASPANVAFAKANLAELKPKMDQADGLGRRR*
Ga0062590_1018851102	3300004157	Soil	ARSAKLPAAERAAQMEKDPKISSILKENGLTARDYLVGVPTLRMALLVAQGLASPNIVASPANAAFAKANLAQLKPKMDQADGVARGR*
Ga0062592_1022569842	3300004480	Soil	AKSMKMTPAERRAQVEKDPKAMAILKENGLTAPDYLVGVPTLRMALMVAQGAVTGPTIIASSANVAFAKANLNELKPKMDAADGISARK*
Ga0062594_1000921362	3300005093	Soil	QERMRKSATMTAADRIAQLDSDPKAAAILKQNSLTARDYLIGVPALRMALMAAQGATAPNIVASPANLAFAKANLAQLKPKMDAADGIRR*
Ga0065715_100915311	3300005293	Miscanthus Rhizosphere	MTKYLISLPDYQERMRKSATMTAADRIAQLENDPKAAAILKQNSLTARDYLVGVPALRMALMAAQGATAPNVVASPANVAFAKANLAQLKPKMDAADGIRR*
Ga0065707_111327391	3300005295	Switchgrass Rhizosphere	FQKRVLKSMQLTPAERLEQLEKDPKAMAILKQNSLTAHDYLVGVPALRMALMAAQGAKAPNITVSPANLAFAKANLAELKPKMDAADGMRPQK*
Ga0070668_1020027392	3300005347	Switchgrass Rhizosphere	VSLPDYQERVRKSATMSAADRIAQIEADPKAAAILKQNSLTARDYLTGVPALRMALMAAQGATGPNIVASPANVAFGKANLAQLKPKMDTADGIRR*
Ga0070669_1001030391	3300005353	Switchgrass Rhizosphere	AEHLITAMQAMTSYLVSLPDYQERLRKSATMTAADRIAQIEADPKAAAILKQNSLTARDYLIGVPTLRMALMAAQGATSPNIVASPANVAFAKANLAQLKPKMDAADGIRR*
Ga0070669_1001619811	3300005353	Switchgrass Rhizosphere	KAQLEGDPKAMAILKQHNLTTQDYLVGVPALRMALMAAQGLTAPNIIASPANVAFAKANLATLKPKMDAADGIGRGK*
Ga0070669_1003245191	3300005353	Switchgrass Rhizosphere	DYQARMRKSATMTAADRIAQLESDPKAAAILKQNSLTARDYLIGVPALRMALMAAQGATAPNIVASPANLAFAKANLAQLKPKMDAADGIRR*
Ga0070675_1016510241	3300005354	Miscanthus Rhizosphere	MEEMTKYVVSLPNFQERMAKTMKMTPAERKAQLEGDPKAMAILKQHNLTTQDYLVGVPALRMALMAAQGLTAPNIIASPANVAFAKANLATLKPKMDAADGIGRGK*
Ga0070675_1017521871	3300005354	Miscanthus Rhizosphere	HQARMQKSATMSAADRIAQLEADPKAAAILKQNSLTARDYLTGVPALRMALMAAQGVTAPNIVASPANVAFAKANLTQLKPKMDAADGLSR*
Ga0070675_1020422691	3300005354	Miscanthus Rhizosphere	MQAMTKYLISLPDYPERIRKSATMTAADRIAQLESDPKAAEILKKNSVTARDYLIGVPALRMALIAAQGATGPNIVASPANLAFAKANLAQLKPKMDAADGIRR*
Ga0070674_1006579941	3300005356	Miscanthus Rhizosphere	TKYLVTLPDFRDRMVKSTKMTPAERRSQLENDPKAMAILKQNGLTAQDYLVGVPTLRMALMVAQGAPAGPNMIASPANVAFAKANLAQLKPKMDLADGIGTRK*
Ga0070688_1011996582	3300005365	Switchgrass Rhizosphere	GMTKYLVTLPDFQDRMVKSMKMTPAERRSQLEKDPKATAILKQNGLTAQDYLVGVPTLRMALMVAQGAPAGPNMIASPANVAFAKANLAQLKPKMDLADGIGARK*
Ga0070688_1016374991	3300005365	Switchgrass Rhizosphere	TPPGAEHLITAMQAMTSYLVSLPDYQERLRKSATMTAADRIAQIEADPKAAAILKQNSLTARDYLIGVPTLRMALMAAQGATSPNIVASPANVAFAKANLAQLKPKMDAADGIRR*
Ga0070667_1012570112	3300005367	Switchgrass Rhizosphere	NRLITAMEAMTKYVVSLPDFKERLAKQGKMTSAEQVATVEKDPKAMAILKQNGLTAQEYLVGVPTLRMALIVASPGGAPAPSIYASPGNVAFAKANYAQLKPKMDAADGVSAAKK*
Ga0070713_1008187661	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	QDRVRKSMTMTPAERIAQIENDPKAMAIVKGNGLTAREYLIGVPTLRMALLAAQGGPLGARAIASPANIAFAKAHLAELKPKMNAAEGIPSRK*
Ga0070701_101822731	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	IAQLDSDPKAAAILKQNSLTARDYLIGVPALRMALMAAQGATAPNIVASPVNLAFAKANLAQLKPKMDAADGIRR*
Ga0070701_104184691	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MTRAELIAQMEKDPKSMAIVTPRGLKAKDYIYGVPALRMALMAAQGLSAPTIVASPANVAFAKANLAQLKPKMEAAEGRGRQ*
Ga0070705_1008648762	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	EAMTRHVASLPDFKERLRKSAQMTPAERLPLVENDPKAMEILKQNELTAREYLVGVPALRMALIAGQGLARNQYIIASPANVAFAKAHLAELKPKMDAADGIRRK*
Ga0070700_1013599551	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MEAMTKYLVSLPDYQERMRKSATMTAADRIAQLENDPKAAAILKQNSLTARDYLVGVPALRMALMAAQGATAPNVVASPANVAFAKANLAQLKPKMDAADGIRR*
Ga0070694_1000855361	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	YQERMRKSATMTAADRIAQLDSDPKAAAILKQNSLTARDYLIGVPALRMALMAAQGATAPNIVASPANLAFAKANLAQLKPKMDAADGIRR*
Ga0070694_1003432771	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	ILGYSLTLDRANHLITAMTGVTQYLVSQPDYLQRVAESAKLPAAEQAARMEKDPKISSILKDNGLTARDYIVGVPTLRMALMAAQGLSTPNIVASPANVAFAKANLAELKPKMDQADGLGRRR*
Ga0070681_106341061	3300005458	Corn Rhizosphere	RMRKSATMTAAERIKQLETDPRAAAILKENSLTARDYLIGIPTLRMALMAAQGAAAPNIVASPANVAFAKANLAQLKPKMDVADGIAR*
Ga0070698_1019143351	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	AERREQLEKDPKAMAILKQNSLTAQDYLVGVPALRMALMAAQGAKAPTITVSPANLAFAKAHLAELKPKMDAADGMRPQK*
Ga0070684_1009544111	3300005535	Corn Rhizosphere	NRLLDSMKMTAAERRAQLEGDPRAMAILKANGLTAQDYLIGVPALRMSLMAAQGPADAPNLAVSPANLAFARANLAQLKPKLDAADGVKPGKK*
Ga0070686_1002407592	3300005544	Switchgrass Rhizosphere	LPRANELITAMEEMTKYVVSLPNFQERMAKTMKMTPAERKAQLEGDPKAMAILKQHNLTTQDYLVGVPALRMALMAAQGLTAPNIIASPANVAFAKANLATLKPKMDAADGIGRGK*
Ga0070686_1006731913	3300005544	Switchgrass Rhizosphere	KMTRAELIAQMEKDPKSMAIVTPHGLKAKDYIYGVPALRMALMAAQGLSAPTIVASPANLAFAKANLAQLKPKMDAAEGRGRQ*
Ga0070695_1015183231	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	ATMTAADRMAQLESDPKAADILKQNSLTARNYLIGVPALRMALLAAQGASAPNIVASPANVAFAKANLAQLKPKMDAADGIRR*
Ga0070696_1018518852	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	TMTPAERLAMLEKDPRAAAILKENSLTAREYMAGVPALRMALLLSQGPAPTPNIIASPANIAFAKANYADLWPKLEAAEGIRRP*
Ga0070704_1014654401	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	KMTRAELIAQMEKDPKSMAIVTPRGLKAKDYIYGVPALRMALMAAQGLSAPTIVASPANVAFAKANLAQLKPKMEAAEGRGRQ*
Ga0068854_1019210042	3300005578	Corn Rhizosphere	EMTKYVVSLPNFQERMAKTMKMTPAERKAQLEGDPKAMAILKQHNLTTQDYLVGVPALRMALMAAQGLTAPNIIASPANVAFAKANLATLKPKMDAADGIGRGK*
Ga0068859_1013557512	3300005617	Switchgrass Rhizosphere	ELITAMEEMTKYVVSLPNFQERMAKTMKMTPAERKAQLEGDPKAMAILKQHNLTTQDYLVGVPALRMALMAAQGLTAPNIIASPANVAFAKANLATLKPKMDAADGIGRGK*
Ga0068861_1022116121	3300005719	Switchgrass Rhizosphere	ADRIAQIEADPKAAAILKQNSLTARDYLIGVPTLRMALMAAQGATSPNIVASPANVAFAKANLAQLKPKMDAADGIRR*
Ga0066903_1000040096	3300005764	Tropical Forest Soil	MQAMSKYLISLPDYQERMRKSVTMPAAERIAQLEKDPKTAAILKENGLTARDYLVGVPALRMALMAAQGGTAPNIVASQANVAFAKANLAQLKPKMDAADALR*
Ga0066903_1055706281	3300005764	Tropical Forest Soil	YVLSLPDSRERLRKSTTMTPAQLQAQIEDDPKAVAILKQNNLTASEYLVGVPALRMALMVAEGLPPNEMIVASPANVSFVKAHMAELRPKIEAAEGLGGRR*
Ga0068863_1027213501	3300005841	Switchgrass Rhizosphere	ITAMESMTKYVMSLPDFQGRMARMAKMTAAERRAQVENDPKAMAILKQNNLTLQDYLVGVPALRMALMAAQGVKAPTVVASPANLAFAKANLAELKPKLDAADGMTARQ*
Ga0068858_1018306982	3300005842	Switchgrass Rhizosphere	MTKYVVSLPDYADRLRKAGGMSAAQRLAQIEADPKAMAILKQNNLTARDYLVGVPALRMALILAQGTLAQGSPAAGNLVASPANVAFAKANLAILKAKMDAADGLSTSRK*
Ga0068862_1004687322	3300005844	Switchgrass Rhizosphere	VSLPNFQERMAKTMKMTPAERKAQLEGDPKAMAILKQHNLTTQDYLVGVPALRMALMAAQGLTAPNIIASPANVAFAKANLATLKPKMDAADGIGRGK*
Ga0081455_107431082	3300005937	Tabebuia Heterophylla Rhizosphere	LSLERANHLIAALDAMTKYVVSLPDFQERMAKSMKMTPAERTAQVEKDPKAMAILKQNDLTVPDYMVGVPALRMALMAAQGVTAPNVIASPANVAFAKANLATLKPKMDAADGAGRGR*
Ga0075421_1015492851	3300006845	Populus Rhizosphere	YQERLVRSAKLPAAERAAQMEKDPKISSILKENGLTARDYLVGVPTLRMALLVAQGLASPNIVASPANAAFAKANLAQLKPKMDQADGLARGR*
Ga0075425_1013064822	3300006854	Populus Rhizosphere	LIAAMEEMTKYVVSLPNFQERMAKTMKMTPAERKAQLEGDPKAMAILKQHNLTTQDYLVGVPALRMALMAAQGLTAPNIIASPANVAFAKANLATLKPKMDAADGIGRGK*
Ga0075424_1020508981	3300006904	Populus Rhizosphere	VTQYLVSQPDYLQRAAESAKLPAAEQAARMEKDPKISSILKENGLTARDYIVGVPTLRMALMAAQGLTTPNIVASPANVAFAKANLAELKPKMDQADGLGRRR*
Ga0075424_1027633941	3300006904	Populus Rhizosphere	MDYQLTLPRAEHLITALDALTKYLVSLPDYQERLRRSATMTPAERAAQMEKDPKTAAILKDNNLTARDYLVGVPALRMALMAAQGGTAPSIVASPANVAFAKANLAQLKPKMDAADGAGRR*
Ga0105245_125529092	3300009098	Miscanthus Rhizosphere	QPAERLALVENDPKAMEILKQNDLTAREYLVGVPALRMALIAAQGMARNQYIIASPANVAFAKAHLAELKPKMDGADGIRRK*
Ga0075418_121400331	3300009100	Populus Rhizosphere	IAALESMTKYVVSLPDFQDRLKKAMTMTPAERRAQIERDPKATAILKQNSLTATEYLVGVPALRMALLAAQGASGPTIAVSPANLAFAKAHLADLKPKMDAADGGARGK*
Ga0075423_101584621	3300009162	Populus Rhizosphere	AMQAMTKYLVSLPDYQDRMRKSMTMTGAERIAQLEKDPKAAAILKENSLTARDYLVGVPALRMALMAAQGATAPNIVASPANTAFAKANLNTLKPKMDAVDGGGRR*
Ga0105241_106630851	3300009174	Corn Rhizosphere	RHVASLPDFKERLRKSAQMTPAERLPLVENDPKAMEILKQNELTAREYLVGVPALRMALIAGQGLARNQYIIASPANVAFAKAHLAELKPKMDAADGIRRK*
Ga0105242_108372211	3300009176	Miscanthus Rhizosphere	TALDALTKYMVSLPDYQERLRKSATMTPAERAAQMENEPKTAAILKDNSLTARDYLVGVLALRMALMGAQGANTGPSIAYSPANLAFAKANLKTLKPKMDAVDGGGRR*
Ga0105242_128439542	3300009176	Miscanthus Rhizosphere	ANHLITAMEAMTKYLVSLPDFMERMRKAANMTPAERRAKVENDPKAMAILKQNGLSAQEYLTGVPALRMALLAARGMDKDPGIIVSPANVAFAKANLAELKPKMDAADGVGSLKFPMRPPT*
Ga0105248_116787252	3300009177	Switchgrass Rhizosphere	KSATMTPAERAAQMEKDPKTAAILKDNSLTARDYLVGVLALRMALMGAQGAESGPTIAYSPANLAFAKANLKTLKPKMDAVDGGGRR*
Ga0126382_111363792	3300010047	Tropical Forest Soil	MTKYVVSLPDFAERIRKSRQMTPAEQIARIENDPKAADILKQNQLTAKDYIVGVPALRMALLAASGLPANPNIIASPANLAFAKANLSVLKPKMDAADGVGVRR*
Ga0126377_101221801	3300010362	Tropical Forest Soil	VSRPDFQERLAKSMKMTAAERRAQIEGDPQAMAILKQNNLTAMDYLVGVPALRMALLAAQGANGPTVVASPANVVFAKANLTQLKPKMDAADGATGRR*
Ga0136847_131688372	3300010391	Freshwater Sediment	PDFQDRLSKSMKMTAAEQLARLEGDPKAMAILKQNGLTAQEYLVGVPALRMALMAAQGLANAPNITVSPANLAFAKANLTQLKPKMDAADGIRRE*
Ga0136847_134540611	3300010391	Freshwater Sediment	EQRVQLEKDPKAMAIRKDNGLTAQEYLVGVPALRMALMAAQGLANAPNITVSTANLAFAKANLAKLKPKMDAADGIRPRK*
Ga0134127_119396261	3300010399	Terrestrial Soil	FQGRMARMAKMTAAERRAQVENDPKAMAILKQNNLTLQDYLVGVPALRMALMAAQGVKAPTVVASPANLAFAKANLAELKPKLDAADGMTARQ*
Ga0134127_129315571	3300010399	Terrestrial Soil	QLTVPRANQLISAMGAMTKYLVSLPDFQDRMVKSMKMTPAERLAQVEKDPKAMAILMQNGLTAREYLVGVPTLRMALMVAQGLPTGPNVIASPANVAFAKTNLAQLKPKMDAADGIGARK
Ga0134127_129933232	3300010399	Terrestrial Soil	MTRHVASLPDFKERLRKSAQMTPAERLPLVENDPKAMEILKRNELTAREYLVGVPALRMALIAGQGLARNQYIIASPANVAFAKAHLAELKPKMDAADGIRRK*
Ga0134123_118399333	3300010403	Terrestrial Soil	ELIAQMEKDPKSMAIVTPRGLKAKDYIYGVPALRMALMAAQGLSAPTIVASPANVAFAKANLAQLKPKMEAAEGRGRQ*
Ga0137356_10641201	3300011402	Soil	MTKYLVSLPDFQGRMAKSMKMTPAEGRAQVEKDPKAMAILKENGLTAQDYLVGVPTLRMALMVAQGAPTGPTIIASSANVAFAKANLSELKPKMDAADGISARK*
Ga0137432_10336462	3300011439	Soil	MGAMTKYLVSLPDFQGRMAKSMKMTPAEGRAQVEKDPKAMAILKENGLTAQDYLVGVPTLRMALMVAQGAPTGPTIIASSANVAFAKANLSELKPKMDAADGISARK*
Ga0137388_107449781	3300012189	Vadose Zone Soil	RANQLIPAMEAMTKYVASLPDFKERVVKGMKMTPAERLAEVEKDPKAMAIIKQNGLTARDYLAGVPALRMAMMIAAGAPNGPAVYASPANVAFAKEHLAELKPKMDAADGIAPRKK*
Ga0137388_119046311	3300012189	Vadose Zone Soil	YQLTLPRANQLITAMQEMTKYVVSLPDFQDRMIKSMKMTSGERRAQLEKDPKAMAILKEHGLSAEDYLVGVPALRMALMAAQGATNNAFPASPANLAFAQAHLSELKPKMDAADGIGGRR
Ga0150985_1111582272	3300012212	Avena Fatua Rhizosphere	KYLISLPNFQDRLLDSMKMTAAQRRTQLESDPKAMAILKAHSLTAQDYLVGVPALRMALRAAEAPVDTPNLAVSPANLAFARANVAQLRPKMDAADGIKPRK*
Ga0137398_103135153	3300012683	Vadose Zone Soil	FVVSLPNFQDRLRKSATRTPAERVAQIENDPKAMAIVKQNGLTAREYLIGVPALRMALLAAQGAPAGPYIIASPANVAFAKAHLAELKPKMDAADGIRSRK*
Ga0157282_102280432	3300012904	Soil	MSAADRIAQIEADPKAAAILKQNSLTARDYLIGVPALRMALMRAQGATAPNIVASPENVAFAKANLAQLKPKMDAADSMRR*
Ga0137407_123634791	3300012930	Vadose Zone Soil	TAMEAMTKYVASLPNFQDRVRKSMTMTPAERVAQIENDPKAMAIVKQNGLTAREYLVGVPALRMAILAAQGGPIGAKVIASPANLAFAKAHLAELKLKMNAVDGIPSGNSPHQ*
Ga0164300_108935031	3300012951	Soil	LRRANQLITAMEAMTKYLVSLPDFQERLGKSMKMTPAERRAQVEQDQKAMAILNQNGLTEQDYLVGVPALRMALMMAQGVPAGPTIMASPANVAFAKANLSQLKPKMDAADGIGRK*
Ga0126369_107217611	3300012971	Tropical Forest Soil	NQLISAMEAMTNYVRSLPDYRERLAKSMQLTPAEQLAKIESDSKAMAILKQNNLTAKEYAVGVPALRMAIIAAQGRTSEYIVASPANLAFAKANMAALKAKMDAADGIPAKK*
Ga0126369_112289931	3300012971	Tropical Forest Soil	PDYQERMRKSATMTAADRIAQIEADPKAAAILKQNSLTARDYLIGVPALRMALMAAQGATGPNIVASPANVVFAKANLAQLKPKMDAADGLRR*
Ga0157378_129418931	3300013297	Miscanthus Rhizosphere	AEHLITAMEAMTKYLVSLPDYQERLRKSATMPAADRIAQLENDPKAAAILKQNSLTARDYLVGVPALRMALMAAQGATAPNVVASPANVAFAKANLAQLKPKMDAADGIRR*
Ga0163163_120695962	3300014325	Switchgrass Rhizosphere	LPRANQLITAMETMTKYVMSLPDFQGRMARMAKMTAAERRAQVENDPKAMAILKQNNLTLQDYLVGVPALRMALMAAQGVKAPTVVASPANLAFAKANLAELKPKLDAADGMTARQ*
Ga0157380_111542112	3300014326	Switchgrass Rhizosphere	MEAMTRYFLSRPDHQALVAKSAKMTPAERLAQFEKDPKAMAIAKQNGLTAREYLVGVPALRMALMAAQGLSGPNITVSPANLAFAKANLAQLKTKMEAADGIRPKH*
Ga0157380_121354952	3300014326	Switchgrass Rhizosphere	YVISLPDYQERMKKSATMTAAERIAQIEKDPKAAAILKQNSLTARDYLTGVPALRMALLAAQGATGPNIVASPANVVFAKTNLAQLKPKMDAADGIRR*
Ga0157380_124154022	3300014326	Switchgrass Rhizosphere	PAERLALLEKDPKAAAILKENGLTAREYLVGVPALRMALMMAQGAPAGPTVFASPANVAFGKANLAELKPKMDAADGIGPRK*
Ga0157377_103453161	3300014745	Miscanthus Rhizosphere	HLITAMQAMTKYLISLPDYQERMRKSATMTAADRIAQLESDPKAAAILKQNSLTARDYLIGVPALRMALMAAQGATAPNIVASPANLAFAKANLAQLKPKMDAADGIRR*
Ga0157377_113165291	3300014745	Miscanthus Rhizosphere	RLINSMKMTAAERSAQLQADAKAMAILKANGLTVHDYIVGVPSLRMALMAAQAPADAPNLAVSPANLAFAKANLAQLKPKMDAADGIRAKK*
Ga0173483_106048231	3300015077	Soil	MTKYLVSLPDYQNRLVRSMKMTPAERRAQFEKDPKAMAIVKQNSLTSQDYLVGVPALRMALMAAQGLASSPNVIASPANVAFAKANLSELKPKMDAADGVAGRK*
Ga0132258_101229791	3300015371	Arabidopsis Rhizosphere	RLRKSATMTAADRIAQLENDPKAAAILKQNSLTARDYLVGVPALRMALMAAQGVTAPNVVASPANVAFAKANLAQLKPKMDAADGIRR*
Ga0132258_113824665	3300015371	Arabidopsis Rhizosphere	SATMTAAERIAQIEKDPKAADILKQNSLSARDYLIGVPALRMALMQAQGATAPNIVASPANVKFAKANLAELKPKMDAADGIRR*
Ga0132258_133320881	3300015371	Arabidopsis Rhizosphere	MQAMTTYLISLPDYQERMRKSATMTAADRIAQIETDPKAAAILKQNSLTATDYLIGVPALRMALMAAQGATTPNIVASPANLAFAKANLAQLKPKMDAADGIRR*
Ga0132258_139305681	3300015371	Arabidopsis Rhizosphere	MKMSPAERRTQFEKDPKAMAIVKQNGLTSQEYLVGVPALRMALMAAQGLGRPQNIVASPANVAFAKANLSQLKPKMDAADGVAGKK*
Ga0132257_1020330011	3300015373	Arabidopsis Rhizosphere	KLPAAERAAQMEKDPKISGILKENNLTPREYIVGVPTLRMALMTAQGATSPNIVASPANVAFAKANLAQLKPKMDQADGIGRGK*
Ga0132255_1009842061	3300015374	Arabidopsis Rhizosphere	DYKDRLAKSAKMTAAEQAAQMEKDPTISGVLKSNDLTARDYIVGVPTLRMALFAAQGLNTPNIVASPANVAFAKANLATLKPKMDQADGAGRRQ*
Ga0132255_1016738841	3300015374	Arabidopsis Rhizosphere	GAEHLITAMEAMTKYLVSLPDYQERMRKSATMTAADRIAQLENDPKAAAILKQNSLTARDYLVGVPALRMALMAAQGATAPNVVASPANVAFAKANLAQLKPKMDAADGLRR*
Ga0132255_1017423321	3300015374	Arabidopsis Rhizosphere	MTAMTKHLVSLPNYQDVLAKSMKMTSAERRAQLEKDPEAMAILKQNGLTSQDYLVGVPALRMALMAAQNLGSSPNVIASPANVAFAKANLAQLKPKMDAADGIAGRK*
Ga0132255_1037341582	3300015374	Arabidopsis Rhizosphere	ATMTAAERIKQLETDPRAAAILKENSLTARDYLIGVPALRMALMAAQGATAPNIVASPANVAFAKANLAQLKPKMDAADGIR*
Ga0134083_105716441	3300017659	Grasslands Soil	ATMTPAERAAQMEKDPKTAAILKDNSLTARDYLVGVLALRMALMGAQGGESGPTIVYSPANLAFAKANLGTLKPKMDAVDGGGRR
Ga0163161_114271592	3300017792	Switchgrass Rhizosphere	TKYVTSRPDAAERIRKSATMTPAERLAQVENDPKAMAILKQNNLTARDYLIGVPVLRMALMVAQGLPQSEKIVASPANVAFAKAHLAELKPKMDAADGVKKGRQ
Ga0187775_103295391	3300017939	Tropical Peatland	MTRYVTSLPDARERIARSLKMTPAEQLAQVEKDPKAMAILKDNDLTAREYIVGVPALRMALLAAQGMTSDNIIASPGNVAFAKANLAQLKPKMDAADRGAGH
Ga0187765_100698733	3300018060	Tropical Peatland	LTLPGAEHLITAMQAMTTYLVSLPDYQERMRKSATTTAADRIAQLETDPKASAILKQNSLTARDYLIGVPTLRMALMAAQGTTSPNIVASPANVAFAKANLAQLKPKMDTADGLRR
Ga0184635_101848622	3300018072	Groundwater Sediment	ATMTPAERAAQMEKDPKTAAILKDNSLTARDYLVGVLALRMALMGAQGADTGPSIAYSPANLAFAKANLKTLKPKMDAVDGGGRR
Ga0184629_104301581	3300018084	Groundwater Sediment	AMTKYLVSLPNFQDRLVKSMKMAPAERLAQLENDPNAMAILKKNGLTAQDYLVGVPTLRKALMAAQGQANAPSSGVSPANLAFAKANLAQLKPRMDAADGIRPQN
Ga0190274_137428162	3300018476	Soil	PDFQDRMVKSMKMTPAERRSQLEKDPKAMAILKQHGLTAQDYLVGVPTLRMALMVAQGAPPGPNMIASPANVAFAKANLAQLKPKMDLADGIGTRK
Ga0210380_104931481	3300021082	Groundwater Sediment	NHLIAAMTSVTQYLVSLPDYQERLVRSAKLPAAERAAQMEKDPKISSILKENGLTARDYLVGVPTLRMALLVAQGLASPNIVASAANAAFAKANLAQLKPKMDQADGLARGR
Ga0210380_105430821	3300021082	Groundwater Sediment	TTYLTSLPDYQERMRKSATMTAADRIAQIETDPKAAAILKQNSLTARDYLIGVPTLRMALLAAQGATTPNIVASPANLAFAKANLAQLKPKMDAADGLRR
Ga0222622_102122882	3300022756	Groundwater Sediment	QAMTKYLTSLPDYQERMRKSATMTAADRIAQIEKDPKAAEILKENSLTARDYLIGVPTLRMALMAAQGATAANIVASPANLVFAKANLAQLKPKMDAADGIRR
Ga0247744_10714871	3300023073	Soil	SATMTAADRIAQIEADPKAAAILKQNSLTARDYLIGVPTLRMALMAAQGATSPNIVASPANVAFAKANLAQLKPKMDAADGIRR
Ga0207662_108799431	3300025918	Switchgrass Rhizosphere	LITAMQAMTKYLISLPDYPERIRKSATMTAADRIAQLESDPKAAEILKKNSVTARDYLIGVPALRMALMAAQGNTAPNIGASPANVAFAKANLAQLKPKMDAADGR
Ga0207646_109257802	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTPAERLAQLENDPAAMAILKQHELTARDYMVGVPTLRMALMAAQGAADSPNVVASPANVAFANANLAQLKPKLDAADGGAGK
Ga0207681_106182951	3300025923	Switchgrass Rhizosphere	ERKAQLEGDPKAMAILKQHNLTTQDYLVGVPALRMALMAAQGLTAPNIIASPANVAFAKANLATLKPKMDAADGIGRGK
Ga0207659_113933582	3300025926	Miscanthus Rhizosphere	ITAMQAMTKYLISLPDYQERMRKSATMTAADRIAQLDSDPKAAAILKQNSLTARDYLIGVPALRMALMAAQGATAPNIVASPVNLAFAKANLAQLKPKMDAADGIRR
Ga0207659_115530711	3300025926	Miscanthus Rhizosphere	VSLSNFQERMAKTMKMTPAERKAQLEGDPKAMAILKQHNLTTQDYLVGVPALRMALMAAQGLTAPNIIASPANVAFAKANLATLKPKMDAADGIGRGK
Ga0207686_114870812	3300025934	Miscanthus Rhizosphere	QERLRKSATMTPAERAAQMENEPKTAAILKDNSLTARDYLVGVLALRMALMGAQGANTGPSIAYSPANLAFAKANLKTLKPKMDAVDGGGRR
Ga0207709_104595351	3300025935	Miscanthus Rhizosphere	ASLPDFAERVRKSATMTPAEQLAQVENDPKATAILKQHNLTAREYLIGVPVLRMALMVAQGLPQSDRIVASPANVAFARAHLAELKPKMEAADGVKGRQ
Ga0207669_106492932	3300025937	Miscanthus Rhizosphere	QDRMVKSMKMTPAERRSQLEKDPEATAILKQNGLTAQDYLVGVPTLRMALMVAQGAPAGPNMIASPANVAFAKANLAQLKPKMDLADGIGTRK
Ga0207704_109452221	3300025938	Miscanthus Rhizosphere	MDYPLTMPRANQLISALTAMTKYVVSLPDYAERVRKSAQMTAAEQIAQLEKDPKAAAILKQNQLTAREYLVGVPTLRMALLAANGTPGANVIASPANIAFAKANYAALKPKMDAADTGH
Ga0207658_109187651	3300025986	Switchgrass Rhizosphere	LANRLITAMEAMTKYVVSLPDFKERLAKQGKMTSAEQVATVEKDPKAMAILKQNGLTAQEYLVGVPTLRMALIVASPGGAPAPSIYASPGNVAFAKANYAQLKPKMDAADGVSAAKK
Ga0207703_116737112	3300026035	Switchgrass Rhizosphere	SLDAMTKYVVSLPDYADRLRKAGGMSAAQRLAQIEADPKAMAILKQNNLTARDYLVGVPALRMALILAQGTLAQGSPAAGNLVASPANVAFAKANLAILKAKMDAADGLSTSRK
Ga0207708_110408512	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	ATMTAADRIAQLENDPKAAAILKQNSLTARDYLVGVPALRMALMAAQGVTAPNVVASPANVAFAKANLAQLKPKMDAADGIRR
Ga0207708_113719781	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	AERKAQLEGDPKAMAILKQHNLTTQDYLVGVPALRMALMAAQGLTAPNIIASPANVAFAKANLATLKPKMDAADGIGRGK
Ga0207708_115326241	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	LDRANHLITAMTGVTQYLVSQPDYLQRVAESAKLPAAEQAARMEKDPKISSILKDNGLTARDYIVGVPTLRMALMAAQGLSTPNIVASPANVAFAKANLAELKPKMDQADGLGRRR
Ga0207648_110001572	3300026089	Miscanthus Rhizosphere	TAMQAMTTYLISLPDYQERMRKSATMTAADRIAQIEKDPKAAAILKQNSLTARDYLIGVPALRMALMAAQGATTPNIVASPANLAFAKANLAQLKPKMDAADGLRR
Ga0207675_1013055521	3300026118	Switchgrass Rhizosphere	AMQAMTSYLVSLPDYQERLRKSATMTAADRIAQIEADPKAAAILKQNSLTARDYLIGVPTLRMALMAAQGATSPNIVASPANVAFAKANLAQLKPKMDAADGIRR
Ga0207675_1013871581	3300026118	Switchgrass Rhizosphere	RANSLITSLDAMTKYVVSLPDYADRLRKAGGMSAAQRLAQIEADPKAMAILKQNNLTARDYLVGVPALRMALILAQGTLAQGSPAAGNLVASPANVAFAKANLAILKAKMDAADGLSTSR
Ga0179587_103121243	3300026557	Vadose Zone Soil	KKSMKMTPAERLAQLENDPKAMAIVKQNGLTSRDYVVGVPALRMAMMAAQGAPAGPYIIASPANVAFAKAHLAELKPKMDAADGIRSRK
Ga0208185_10624811	3300027533	Soil	MTKYLVSLPDYQNRLVKSMKMTPAERRAQFEKDPKAMAIVKQNSLTSQDYLVGVPALRMALMAAQGLANSPNVIASPANVAFAKANLSELKPKMDAADGVAGRK
Ga0209283_102858541	3300027875	Vadose Zone Soil	LAYQLTLPRANHLITAMQAMTQYLVSLPDFQDRIVKSMQMTPAEQRAQMEKDPRAMAILKQNGLTALEYQVGVPALRMALMAAQGGAGSADVIASPANVAFAKGHLAELKPKMDAADGLVRPK
Ga0268264_110222372	3300028381	Switchgrass Rhizosphere	MKMTPAERKAQLEGDPKAMAILKQHNLTTQDYLVGVPALRMALMAAQGLTAPNIIASPANVAFAKANLATLKPKMDAADGIGRGK
Ga0307500_102824901	3300031198	Soil	YLISRPDYQERMRKSAAMTAADRMAQLESDPKAAEILKQNSLTARDYLIGVPALRMALMAAQGATAPNIVASPANVAFAKANLAQLKPKMDAADGMRR
Ga0310892_100395303	3300031858	Soil	AMTSYLVSLPDYQERLRKSATMTAADRIAQIEADPKAAAILKQNSLTARDYLIGVPTLRMALMAAQGATSPNIVASPANVAFAKANLAQLKPKMDAADGIRR
Ga0310892_107010962	3300031858	Soil	AMSKYMVSLPDFQDRMAKSMKMTTAERKAGITGDPKTAAILKDNKLTADEYLVGVPALRMAMMVAQGLPPSANVVASPANVAFAKANLAELKPKMDAADAAMRPKK
Ga0310900_117065371	3300031908	Soil	SLPDYQERVRKSATMSAAERIVQIEADPKAAAILKQNSLTARDYLTGVPALRMALMAAQGATGPNIVASPANVAFGKANLAQLKPKMDTADGIRR
Ga0310903_103300681	3300032000	Soil	ISLPDYQERLRKSATMTAADRIAQIEADPKAAAILKQNSLTARDYLIGVPTLRMALMAAQGATSPNIVASPANVAFAKANLAQLKPKMDAADGIRR
Ga0310897_102550702	3300032003	Soil	TMTAADRIAQIEKDPQAAAILKQNSLTARDYLIGVPALRMALMRAQGATAPNIVASPANVAFAKANLAQLKPKMDAADGIRR
Ga0310890_116174551	3300032075	Soil	RMRKSATMSAADRIAQLEADPRTAAILKQNSLTARDYLTGVPALRMALMAAQGVTAPNIVASPANVAFAKANLAQLKPKMDAADGIRR
Ga0335082_101922912	3300032782	Soil	MTAITKYVASLPDFQERIRKSVTMTPAEQIAKLEGDPKAMTILKENGLTAREYIIGVPALRMALMAAQGVPPGPKIIVSPANLEFAKANLAQLKPKMDAADGIRSGT
Ga0335080_119413431	3300032828	Soil	SLPDFQERMKKAITMTLSEQVAQVEKDPKATAIVKENGLTAREYLIGVPALRMALLAAQGLATGPRLLASPANIAFAKANLAELKPKMDAADGMRPGR
Ga0364924_045795_572_883	3300033811	Sediment	MTQYVVSLPDFQDRVVKAMKMTPAERRMQMEEDPKAMAILKENNLTAQEYLVGVPTLRMALMAAQGASSPGVIASPTNVAFAKANLAELKPKMDAADGLVRPK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F058523

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences