Metagenome / Metatranscriptome Family F058479

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F058479
Family Type	Metagenome / Metatranscriptome
Number of Sequences	135
Average Sequence Length	57 residues
Representative Sequence	MDATPEQLWQRIVRENPRASDEDIQCLFIAALIDDEDLRLQILERFFKDIRKRLSN
Number of Associated Samples	90
Number of Associated Scaffolds	135

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	42.22 %
% of genes near scaffold ends (potentially truncated)	34.07 %
% of genes from short scaffolds (< 2000 bps)	90.37 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.73

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (62.963 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (32.593 % of family members)
Environment Ontology (ENVO)	Unclassified (45.185 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.111 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.38% β-sheet: 0.00% Coil/Unstructured: 47.62%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.73
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.73
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
c.7.1.0: automated matches	d5fava1	5fav	0.65544
a.21.1.0: automated matches	d1wz6a1	1wz6	0.65287
b.82.3.2: cAMP-binding domain	d1o5la1	1o5l	0.6421
c.66.1.0: automated matches	d4e70a2	4e70	0.6402
a.21.1.0: automated matches	d7jjka_	7jjk	0.63581

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 135 Family Scaffolds
PF02195	ParBc	0.74
PF14588	YjgF_endoribonc	0.74
PF03466	LysR_substrate	0.74
PF00753	Lactamase_B	0.74
PF02796	HTH_7	0.74
PF00239	Resolvase	0.74
PF04964	Flp_Fap	0.74
PF01061	ABC2_membrane	0.74
PF09361	Phasin_2	0.74
PF00589	Phage_integrase	0.74
PF00106	adh_short	0.74
PF01717	Meth_synt_2	0.74
PF03060	NMO	0.74
PF01209	Ubie_methyltran	0.74
PF10129	OpgC_C	0.74
PF05598	DUF772	0.74
PF00582	Usp	0.74
PF11066	DUF2867	0.74
PF07729	FCD	0.74

COG ID	Name	Functional Category	% Frequency in 135 Family Scaffolds
COG0516	IMP dehydrogenase/GMP reductase	Nucleotide transport and metabolism [F]	0.74
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	0.74
COG1802	DNA-binding transcriptional regulator, GntR family	Transcription [K]	0.74
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.74
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	0.74
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	0.74
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.74
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	0.74
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.74
COG3847	Flp pilus assembly protein, pilin Flp	Extracellular structures [W]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.96 %
All Organisms	root	All Organisms	37.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.96 %
cellular organisms	root	All Organisms → cellular organisms	37.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.96 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	37.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	34.07 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.96 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	25.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.96 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	19.26 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.96 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	17.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.96 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	13.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.96 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.96 %
Bradyrhizobium sp. URHD0069	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	0.74 %
Bradyrhizobium sp. sBnM-33	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sBnM-33	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2032320005\|FACEOR_FY84VJD01A3U0M	Not Available	514	Open in IMG/M
3300005332\|Ga0066388_102975039	Not Available	866	Open in IMG/M
3300005434\|Ga0070709_10041086	Not Available	2847	Open in IMG/M
3300005434\|Ga0070709_10171956	All Organisms → cellular organisms → Bacteria	1515	Open in IMG/M
3300005434\|Ga0070709_10886792	Not Available	705	Open in IMG/M
3300005434\|Ga0070709_11539909	Not Available	540	Open in IMG/M
3300005435\|Ga0070714_100650548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1015	Open in IMG/M
3300005435\|Ga0070714_101984334	Not Available	568	Open in IMG/M
3300005436\|Ga0070713_100472427	Not Available	1180	Open in IMG/M
3300005437\|Ga0070710_10287143	Not Available	1069	Open in IMG/M
3300005437\|Ga0070710_10355861	All Organisms → cellular organisms → Bacteria → Proteobacteria	970	Open in IMG/M
3300005439\|Ga0070711_100538157	All Organisms → cellular organisms → Bacteria → Proteobacteria	967	Open in IMG/M
3300005439\|Ga0070711_101343590	Not Available	621	Open in IMG/M
3300005614\|Ga0068856_102677800	Not Available	504	Open in IMG/M
3300005764\|Ga0066903_100028646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	6221	Open in IMG/M
3300005764\|Ga0066903_100201249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2980	Open in IMG/M
3300005764\|Ga0066903_100257278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2703	Open in IMG/M
3300005764\|Ga0066903_100505773	Not Available	2049	Open in IMG/M
3300005764\|Ga0066903_101695886	Not Available	1203	Open in IMG/M
3300005764\|Ga0066903_101778364	Not Available	1176	Open in IMG/M
3300005764\|Ga0066903_102858011	Not Available	937	Open in IMG/M
3300005764\|Ga0066903_108442681	Not Available	525	Open in IMG/M
3300006050\|Ga0075028_100844053	Not Available	561	Open in IMG/M
3300006163\|Ga0070715_10488216	Not Available	703	Open in IMG/M
3300006173\|Ga0070716_100079420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1953	Open in IMG/M
3300006173\|Ga0070716_100303571	Not Available	1111	Open in IMG/M
3300006175\|Ga0070712_100245369	Not Available	1428	Open in IMG/M
3300006175\|Ga0070712_101735231	Not Available	546	Open in IMG/M
3300010048\|Ga0126373_10996818	Not Available	903	Open in IMG/M
3300010361\|Ga0126378_11560922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	749	Open in IMG/M
3300010366\|Ga0126379_11726999	Not Available	730	Open in IMG/M
3300010373\|Ga0134128_12863579	Not Available	531	Open in IMG/M
3300010376\|Ga0126381_104697626	Not Available	526	Open in IMG/M
3300012957\|Ga0164303_10798608	Not Available	649	Open in IMG/M
3300012971\|Ga0126369_12280624	Not Available	628	Open in IMG/M
3300012971\|Ga0126369_13697394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sBnM-33	501	Open in IMG/M
3300012986\|Ga0164304_10900772	Not Available	692	Open in IMG/M
3300012989\|Ga0164305_11593639	All Organisms → cellular organisms → Bacteria → Proteobacteria	582	Open in IMG/M
3300016270\|Ga0182036_11371953	Not Available	591	Open in IMG/M
3300016294\|Ga0182041_10142457	All Organisms → cellular organisms → Bacteria	1837	Open in IMG/M
3300016319\|Ga0182033_10455869	Not Available	1091	Open in IMG/M
3300016319\|Ga0182033_12219808	Not Available	501	Open in IMG/M
3300016341\|Ga0182035_10265371	Not Available	1393	Open in IMG/M
3300016357\|Ga0182032_10518896	Not Available	982	Open in IMG/M
3300016357\|Ga0182032_10960158	All Organisms → cellular organisms → Bacteria → Proteobacteria	729	Open in IMG/M
3300016387\|Ga0182040_10572602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	911	Open in IMG/M
3300016387\|Ga0182040_10904691	Not Available	732	Open in IMG/M
3300016387\|Ga0182040_11089306	Not Available	669	Open in IMG/M
3300016422\|Ga0182039_11487510	Not Available	616	Open in IMG/M
3300016445\|Ga0182038_10487687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1049	Open in IMG/M
3300020579\|Ga0210407_10001904	All Organisms → cellular organisms → Bacteria → Proteobacteria	18689	Open in IMG/M
3300020582\|Ga0210395_10533799	Not Available	882	Open in IMG/M
3300021088\|Ga0210404_10892226	All Organisms → cellular organisms → Bacteria → Proteobacteria	508	Open in IMG/M
3300021168\|Ga0210406_10682630	Not Available	793	Open in IMG/M
3300021402\|Ga0210385_11462327	Not Available	522	Open in IMG/M
3300021403\|Ga0210397_10116419	All Organisms → cellular organisms → Bacteria → Proteobacteria	1826	Open in IMG/M
3300021403\|Ga0210397_11322095	Not Available	560	Open in IMG/M
3300021420\|Ga0210394_10063227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3214	Open in IMG/M
3300021560\|Ga0126371_11136634	Not Available	919	Open in IMG/M
3300021560\|Ga0126371_11868933	Not Available	720	Open in IMG/M
3300022528\|Ga0242669_1115795	All Organisms → cellular organisms → Bacteria → Proteobacteria	534	Open in IMG/M
3300022531\|Ga0242660_1111278	Not Available	681	Open in IMG/M
3300022717\|Ga0242661_1066355	All Organisms → cellular organisms → Bacteria → Proteobacteria	703	Open in IMG/M
3300025898\|Ga0207692_10146044	Not Available	1350	Open in IMG/M
3300025898\|Ga0207692_10356182	Not Available	903	Open in IMG/M
3300025916\|Ga0207663_11730695	Not Available	503	Open in IMG/M
3300025928\|Ga0207700_10660355	Not Available	932	Open in IMG/M
3300026078\|Ga0207702_12094251	Not Available	555	Open in IMG/M
3300026845\|Ga0207760_116723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	594	Open in IMG/M
3300027035\|Ga0207776_1041994	Not Available	558	Open in IMG/M
3300027330\|Ga0207777_1022762	Not Available	1192	Open in IMG/M
3300027371\|Ga0209418_1000543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3453	Open in IMG/M
3300027680\|Ga0207826_1038462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1329	Open in IMG/M
3300027703\|Ga0207862_1149982	Not Available	697	Open in IMG/M
3300027703\|Ga0207862_1200662	Not Available	592	Open in IMG/M
3300031543\|Ga0318516_10437867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	752	Open in IMG/M
3300031544\|Ga0318534_10251020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1021	Open in IMG/M
3300031544\|Ga0318534_10471250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	719	Open in IMG/M
3300031545\|Ga0318541_10793489	Not Available	528	Open in IMG/M
3300031546\|Ga0318538_10264721	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300031561\|Ga0318528_10311643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	845	Open in IMG/M
3300031573\|Ga0310915_10189945	Not Available	1434	Open in IMG/M
3300031573\|Ga0310915_10577876	Not Available	797	Open in IMG/M
3300031573\|Ga0310915_10638300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	754	Open in IMG/M
3300031668\|Ga0318542_10389865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	719	Open in IMG/M
3300031679\|Ga0318561_10793173	Not Available	520	Open in IMG/M
3300031679\|Ga0318561_10798773	Not Available	518	Open in IMG/M
3300031682\|Ga0318560_10683690	Not Available	555	Open in IMG/M
3300031715\|Ga0307476_10872963	Not Available	664	Open in IMG/M
3300031718\|Ga0307474_10055039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2940	Open in IMG/M
3300031718\|Ga0307474_10600229	Not Available	867	Open in IMG/M
3300031718\|Ga0307474_10895057	Not Available	702	Open in IMG/M
3300031718\|Ga0307474_10995483	Not Available	664	Open in IMG/M
3300031720\|Ga0307469_10318832	Not Available	1290	Open in IMG/M
3300031736\|Ga0318501_10804657	Not Available	520	Open in IMG/M
3300031744\|Ga0306918_10646993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	828	Open in IMG/M
3300031744\|Ga0306918_10866876	Not Available	704	Open in IMG/M
3300031753\|Ga0307477_10749997	Not Available	651	Open in IMG/M
3300031764\|Ga0318535_10469809	Not Available	560	Open in IMG/M
3300031768\|Ga0318509_10395520	Not Available	773	Open in IMG/M
3300031771\|Ga0318546_10745553	Not Available	689	Open in IMG/M
3300031777\|Ga0318543_10443370	Not Available	582	Open in IMG/M
3300031823\|Ga0307478_10042209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3349	Open in IMG/M
3300031879\|Ga0306919_10048736	Not Available	2791	Open in IMG/M
3300031890\|Ga0306925_10094439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3178	Open in IMG/M
3300031910\|Ga0306923_11161809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	828	Open in IMG/M
3300031910\|Ga0306923_11243681	All Organisms → cellular organisms → Bacteria → Proteobacteria	793	Open in IMG/M
3300031912\|Ga0306921_10588237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1288	Open in IMG/M
3300031912\|Ga0306921_11536953	Not Available	726	Open in IMG/M
3300031912\|Ga0306921_11965895	Not Available	624	Open in IMG/M
3300031912\|Ga0306921_12478535	Not Available	539	Open in IMG/M
3300031941\|Ga0310912_10685267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	795	Open in IMG/M
3300031941\|Ga0310912_10859671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	699	Open in IMG/M
3300031942\|Ga0310916_10147829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1936	Open in IMG/M
3300031942\|Ga0310916_10368244	All Organisms → cellular organisms → Bacteria → Proteobacteria	1221	Open in IMG/M
3300031942\|Ga0310916_11554817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	538	Open in IMG/M
3300031946\|Ga0310910_11251172	Not Available	574	Open in IMG/M
3300031947\|Ga0310909_10675000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	860	Open in IMG/M
3300031962\|Ga0307479_11993220	Not Available	530	Open in IMG/M
3300032001\|Ga0306922_12256134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	523	Open in IMG/M
3300032039\|Ga0318559_10327834	Not Available	712	Open in IMG/M
3300032059\|Ga0318533_10387336	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
3300032059\|Ga0318533_10490271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	900	Open in IMG/M
3300032064\|Ga0318510_10528689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	513	Open in IMG/M
3300032067\|Ga0318524_10404592	Not Available	712	Open in IMG/M
3300032067\|Ga0318524_10662684	Not Available	550	Open in IMG/M
3300032076\|Ga0306924_10387427	All Organisms → cellular organisms → Bacteria → Proteobacteria	1601	Open in IMG/M
3300032174\|Ga0307470_10263786	Not Available	1146	Open in IMG/M
3300032261\|Ga0306920_100678228	Not Available	1520	Open in IMG/M
3300032261\|Ga0306920_101232865	Not Available	1079	Open in IMG/M
3300032261\|Ga0306920_101478139	Not Available	971	Open in IMG/M
3300032261\|Ga0306920_101550879	Not Available	944	Open in IMG/M
3300032261\|Ga0306920_102919715	Not Available	648	Open in IMG/M
3300033289\|Ga0310914_10895468	Not Available	787	Open in IMG/M
3300034268\|Ga0372943_0042087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2523	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.52%
Host-Associated	Host-Associated	1.48%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.78%
Plants	Host-Associated → Plants	1.48%
Aquatic	Environmental → Aquatic	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.78%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.48%
Sediment	Environmental → Aquatic → Sediment	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.11%
Loam	Environmental → Terrestrial → Soil → Loam	26.67%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	61.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.85%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	32.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	13.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	11.11%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.41%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.22%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.48%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.48%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.74%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2032320005	Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2-	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026845	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 24 (SPAdes)	Environmental	Open in IMG/M
3300027035	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 30 (SPAdes)	Environmental	Open in IMG/M
3300027330	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 35 (SPAdes)	Environmental	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FACEORA_5342350	2032320005	Soil	MIDDTPEQLWQRIVRENPRASDEDIQCLFISALIDDEDLRLQILERFFNDLRKKLSN
Ga0066388_1029750391	3300005332	Tropical Forest Soil	MVDDTPEQLWQRIVRENPRASDEDIQCLFIAALIDDDDLRLQIIERFFKDMRKKLTN*
Ga0070709_100410863	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MVDDTPEQLWQRIVRENPRASDEDIQCLFISALIDDEDLRLQIIERFFKDIRKRLSN*
Ga0070709_101719563	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MDATPEQLWQRIVRENPRASDEDIQCLFLSALMDNEDLRLQILERFFKDIRKRLSN*
Ga0070709_108867921	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MIDDTPEQLWQRIVRENPRASDEDIQCLFISALIDDEDLRLQILERFFNDLRKKLSN*
Ga0070709_115399091	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	QNMVDDTPEQLWQRIVRENPRASDEDIQCLFISALIDDEDLRLQILERFFKDIRKRLSN*
Ga0070714_1006505482	3300005435	Agricultural Soil	MDTTPEQLWRRIVRENPRASDEEIECLFLGAVLDDQDLGLQILERLFKDMRKRLSN*
Ga0070714_1019843342	3300005435	Agricultural Soil	MDATPEQLWQRIVRENPRASDEDIQCLFISALIDDEDLRLQILERFFKDIRKRLSN*
Ga0070713_1004724274	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MVDDTPEQLWQRIVRENPRASDEDIQCLFISALIDDEDLRLQILERFFNDLRKKLSN*
Ga0070710_102871433	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	LGQNMVDDTPEQLWQRIVRENPRASDEDIQCLFISALIDDEDLRLQIIERFFKDIRKRLSN*
Ga0070710_103558611	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	NMDDTPEQLWQRIVRENPCASDEDVQCLFIAALLDDEDLRLQLLERFFKDMRKKLLN*
Ga0070711_1005381572	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MDATPEQLWQRIVRENPRASDEDIQCMFISALIDDEDLRLQLLERFFKDMRKKLLN*
Ga0070711_1013435901	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VVDDTPEQLWQRIVRENPRASDDDIQCLFIAALIDDDDLRLQIIERFFKDMRKKLTN*
Ga0068856_1026778002	3300005614	Corn Rhizosphere	MDDTPEQLWQRIVMENPCASDEDVQCLFIAALIDDEDLRLQLLERFLKDMRKKLLN*
Ga0066903_1000286467	3300005764	Tropical Forest Soil	MVDDTPEQLWKRIVSENPHASDEDIQCLFITALIDDEDLRLQIIERFFKDMRKRLRRRKRLN*
Ga0066903_1002012496	3300005764	Tropical Forest Soil	MVDNTPEQLWQRIVRENPRASDEDIQCQFIAALIDDEDLRLQIIERFFKDIRKRVSN*
Ga0066903_1002572783	3300005764	Tropical Forest Soil	MVDDTPEQLWQRIVRENPRASDEDIQCMFIAALIDDEDLRLQIIERFFKDIRKRLSN*
Ga0066903_1005057733	3300005764	Tropical Forest Soil	VDATPEQLWQRIVKENPRASDEEIEFLFLDAVIDDEDLGVQILQRFFKDIRKRLSN*
Ga0066903_1016958862	3300005764	Tropical Forest Soil	MTNPRGIIWARNMHDTPEQLWQRIVLENPHASDEDIQCLFMAALIDDWDLRRQLLERFFKDMRKKLLN*
Ga0066903_1017783642	3300005764	Tropical Forest Soil	MTGARQLIWARNMVDDTPEQLWRRIERENPRASDEDIQCLFISALIDDDDLRLQIIERFFKDVRKRLSH*
Ga0066903_1028580112	3300005764	Tropical Forest Soil	MDATPEQLWQRIVKENPRASDEEIEFLFLDAVIDDEDLGVQILQRFFKDIRKRLSN*
Ga0066903_1084426811	3300005764	Tropical Forest Soil	ARQLIWARNMVDDTPEQLWRRIERENPRASDEDIQCLFIAALIDDDDLRLQIIERFFKDVRKRLSH*
Ga0075028_1008440532	3300006050	Watersheds	MDATPEQLWQRIVRENPRASDEDIQCLFISALIDDEDLRLQIIERFFKDIRKRLSN*
Ga0070715_104882162	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MDATPEQLWQRIVRENPRASDEDIQCLFISALIDDEDLRLQILERFFNDLRKKLSN*
Ga0070716_1000794205	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	RIVRENPRASDEDIQCLFISALIDDEDLRLQIIERFFKDIRKRLSN*
Ga0070716_1003035711	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MDDTPEQLWQRIVRENPCASDEDVQCLFIAALIDDEDLRLQLLERFFKDMRKKLLN*
Ga0070712_1002453691	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MDATPEQLWQRIVRENPRASDEDIQCLFISALVDDEDLRLQILERFFKDIRKRLSN*
Ga0070712_1017352311	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LGQNMIDDTPEQLWQRIVRENPRASDEDIQCLFISALIDDEDLRLQILERFFNDLRKKLSN*
Ga0126373_109968181	3300010048	Tropical Forest Soil	VKAENQDATPEQLWQRIVRENPRASDKEIEWLFLGAVDDDLRLQILERFFKDIRKRVSN*
Ga0126378_115609221	3300010361	Tropical Forest Soil	MTSPRGSYLGQRNMHDTPEQLWHRIVRENPRASDEDIQCLFIAALIDDDDLRLQIIERFFKDVRKRLSH*
Ga0126379_117269991	3300010366	Tropical Forest Soil	MKPVPFKPSLNVDATPEQLWQRIVRENPRASDEDIQCLFIGALIDDEDLRLQLLERFFKDMRKRLSN*
Ga0134128_128635792	3300010373	Terrestrial Soil	MDDTPEQLWQRIVRENPRASDEDVQCLFIAALIDDEDLRLQLLERFLKDMRKKLLN*
Ga0126381_1046976261	3300010376	Tropical Forest Soil	MVDDTPEQLWRRIVSENPRASDEDIQCLFIAALIDDDDLRLQIIERFFKD
Ga0164303_107986082	3300012957	Soil	MVDDTPEQLWQRIVRENPCASDEDVQCLFIAALIDDEDLRLQLLERFFKDMRKKLLN*
Ga0126369_122806242	3300012971	Tropical Forest Soil	MTSPRGSYLGQRNMHDTPEQLWHRIVRENPRASDEDIQCLFIAALIDDDDLRLQIIERFFKDIRKRVSN*
Ga0126369_136973941	3300012971	Tropical Forest Soil	MDTTPEQLWQRIVRENPRASDKEIEFLFLGAVVDSEDLRLQILERFFKDMRKRLSN*
Ga0164304_109007721	3300012986	Soil	TPEQLWQRIVRENPRASDEDIQCLFISALIDDEDLRLQIIERFFKDIRKRLSN*
Ga0164305_115936392	3300012989	Soil	PEQLWQRIVRENLRASDEEIECLFISALIDDEDLRLQIIERFFKDIRKRLSN*
Ga0182036_113719531	3300016270	Soil	MVDNTPEQLWHRIVRENPRASDEGIRCLFIAALTDDDDLRLQIIERFFKGVRKRVSH
Ga0182041_101424571	3300016294	Soil	MVDDTPEQLWQRIVKENPRASDEDIQCLFIAALIDDEDLRLQIIERFFKDIRKRVSN
Ga0182033_104558692	3300016319	Soil	MDTTPEQLWQRIVRENPCASDKEIEWLFLGAVNDDENLRLQILERFFTDIRKRLSN
Ga0182033_122198081	3300016319	Soil	PSLNVDATPEQLWQRIVRENPRASDEDIQCLFIGALIDDEDLRLQLLERFFKDMRKRLSN
Ga0182035_102653711	3300016341	Soil	RSRGSLLGQNMVDDTPEQLWQRIVRENPRASDEDIQCLFIAALTDDDDLRLQIIERFFKDVRKRVSH
Ga0182032_105188961	3300016357	Soil	DDTPEQLWQRIVRENPRASDEDIQCRFIAALIDEDDLRLQILERFFKDIRKRLSN
Ga0182032_109601581	3300016357	Soil	MKPVPFKPSLNVDATPEQLWQRIVRENPRASDEDIQCLFIGALIDDEDLRLQISERFFKDIRKRLSN
Ga0182040_105726021	3300016387	Soil	PEQLWHRIVRENPRASDEDIRCQFIAALIDDEDLRLQIIERFFKDMRKRLRRRKRLN
Ga0182040_109046912	3300016387	Soil	MRLEAENMDTTPEQLWQRIVRENPLASDREIEWLFLGAVIDDEDLGLQILERFFTDIRKRLSN
Ga0182040_110893063	3300016387	Soil	MDTAPEQLWQRILMENPRASDEEIEWLFIDAVIDDQDLGLRILKRFFKDIRKRLSN
Ga0182039_114875101	3300016422	Soil	MVDNTPEQLWHRIVRENPRASDEDIQCLFIAALTDDDDLRLQIIERFFKDVRKRVSH
Ga0182038_104876873	3300016445	Soil	MNDTPERLWQRIVDQNRRASDEEIHCLFITALIDDEDLRLQIIERFF
Ga0210407_1000190413	3300020579	Soil	LGQKVVDDTPEQLWQRIVRENPRASDEDIQCMFIAALIDDDDLRLQIIERFFKDMRKKLT
Ga0210395_105337992	3300020582	Soil	VVDDTPEQLWQRIVRENPRASDEDIQCMFIAALIDDDDLRLQIIERFFKDMRKKLTN
Ga0210404_108922262	3300021088	Soil	MDDTPEQLWQRIVRENPCASDEDVQCLFIAALLDDEDLRLQLLERFFKDMRKKLLN
Ga0210406_106826302	3300021168	Soil	MDATPEQLWQRIVRENSRASDEDIQCLFISALIDDEDLRLQILERFFKDIRKRLSN
Ga0210385_114623271	3300021402	Soil	KNMDDTPEQLWQRIVRENPCASDEDVQCLFIAALIDDEDLRLQLLERFFKDMRKKLLN
Ga0210397_101164191	3300021403	Soil	VWAINMDDTPEQLWQRIVRENPCASDEDVQCLFIAALLDDEDLRLQLLERFFKDMRKKLL
Ga0210397_113220951	3300021403	Soil	MDATPEQLWQRIVRENPRASDEDIQCLFIAALIDDEDLRLQILERFFKDIRKRLSN
Ga0210394_100632275	3300021420	Soil	RGSLLGQKVVDDTPEQLWQRIVRENPRASDEDIQCMFIAALIDDDDLRLQIIERFFKDMRKKLTN
Ga0126371_111366341	3300021560	Tropical Forest Soil	MVDDTPEQLWKRIVSENPRASDEDIQCLFIAALIDDEDLRLQIIERFFKDIRKRVSN
Ga0126371_118689332	3300021560	Tropical Forest Soil	NHEQALTAAQASPSMRLAGGKMDTTPEQLWQRIQMENPRASDEEIEWLFVDAVIDDEDLGVQILRRFFKDIRKRLSN
Ga0242669_11157952	3300022528	Soil	RNMDDTPEQLWQRIVRENPCASDEDVQCLFIAALLDDEDLRLQLLERFFKDMRKKLLN
Ga0242660_11112781	3300022531	Soil	MDDTPEQLWQRIVRENPCASDEDVQCLFIAALLDDKDLRLQLLERFFKDMRKKLLN
Ga0242661_10663551	3300022717	Soil	MVDNTPEQLWQRIVRENPRASDEDIQCMFISALIDDEDLRLQLLERFFKDMRKKLLN
Ga0207692_101460441	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	AAYLGQNMIDDTPEQLWQRIVRENPRASDEDIQCLFISALIDDEDLRLQILERFFNDLRKKLSN
Ga0207692_103561821	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	GQNMVDDTPEQLWQRIVRENPRASDEDIQCLFISALIDDEDLRLQIIERFFKDIRKRLSN
Ga0207663_117306952	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MDATPEQLWQRIVRENPRASDEDIQCLFISALVDDEDLRLQILERFFKDIRKRL
Ga0207700_106603551	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	NMVDDTPEQLWQRIVRENPRASDEDIQCLFISALIDDEDLRLQIIERFFKDIRKRLSN
Ga0207702_120942511	3300026078	Corn Rhizosphere	MDDTPEQLWQRIVMENPRASDEDVQCLFIAALIDDEDLRLQLLERFLKDMRKKLLN
Ga0207760_1167232	3300026845	Tropical Forest Soil	QNMVDDTPEQLWQRIVKENPRASDEDIQCLFIAALIDDEDLRLQIIERFFKDMRKRLRRRKRLN
Ga0207776_10419941	3300027035	Tropical Forest Soil	MDTAPEQLWQRILMENPRASDEEIEWLFIDAVIDDPDLGLRILKRFFKDIRKRLSN
Ga0207777_10227621	3300027330	Tropical Forest Soil	MDTTPEQLWQRIVRENPRASDKEIEFLFLGAVIDDEDLGVQILQRFFKDIRKRLSN
Ga0209418_10005431	3300027371	Forest Soil	MDDTPEQLWQRIVRENPCASDEDVQCLFIAALIDDEDLRLQILERFFKDMRKKLLN
Ga0207826_10384622	3300027680	Tropical Forest Soil	MTNPRGIIWARNMHDTPEQLWQRIVLENPHASDEDIQCLFMAALIDDWDLRRQLLERFFKDMRKKLLN
Ga0207862_11499822	3300027703	Tropical Forest Soil	MDTTPEQLWQRIVRENPRASDKEIEFLFLGAVIDDEDLRLQILERFFKDMRKRLSN
Ga0207862_12006622	3300027703	Tropical Forest Soil	MVDDTPEQLWQRIVKENPRASDEDIQCLFIAALIDDEDLRLQIIERFFKDMRKRLSN
Ga0318516_104378672	3300031543	Soil	MVDDTPEQLWKRIVSENPHASDEDIQCLFITALIDDEDLRLQIIERFFKDMRKRLRRRKRLN
Ga0318534_102510202	3300031544	Soil	MHDTPEQLWQRIVLENPHASDEDIQCLFMAALIDDWDLRRQLLERFFKDMRKKLLN
Ga0318534_104712501	3300031544	Soil	MDDTPERLWQRIVDQNRRASDEEIHCLFITALIDDEDLRLQIIERFFKDMRKRLTN
Ga0318541_107934891	3300031545	Soil	MGQKNMHDTPEQLWQRIVLENPHASDEDIQCLFMAALIDDWDLRRQLLERFFKDMRKKLL
Ga0318538_102647213	3300031546	Soil	WQRIVDQNRRASDEEIHCLFITALIDDEDLRLQIIERFFKDMRKRLTN
Ga0318528_103116433	3300031561	Soil	MDATPEQLWQRIVRENPRASDKKIEFLFLDAVIDDEGLGAQILQQFFKEIRKKLIN
Ga0310915_101899451	3300031573	Soil	MVDDTPEQLWQRIVRENPRASDEDIQCRFIAALIDEDNLRLQILERFFKDIRKRLSN
Ga0310915_105778762	3300031573	Soil	MSRSRGSLLGQNMVDDTPEQLWQRIVRENPRASDEDIQCLFIAALTDDDDLRLQIIERFFKDVRKRVSH
Ga0310915_106383002	3300031573	Soil	MTNPRGIIWARNMHDTPEQLWQRIVLENPHASDEDIQCLFMAALIDDWDLRRQLLEPFFKDMRKKL
Ga0318542_103898651	3300031668	Soil	DDTPEQLWQRIVKENPRASDEDIQCLFIAALIDDEDLRLQIIERFFKDMRKRLRRRKRLN
Ga0318561_107931732	3300031679	Soil	TPEQLWQRIVRENPRASDEEIEWLFLGTVVDNQDLGLQILERLFKDIRKRLSN
Ga0318561_107987732	3300031679	Soil	CNDNPGGIKNMHDTPEQLWQRIVLENPHASDEDIQCLFMAALIDDWDLRRQLLERFFKDMRKKLLN
Ga0318560_106836901	3300031682	Soil	NMADDTPEQLWQRIVRENPHASDEDIQCRFIAALIDEDDLRLQILERFFKDIRKRLSN
Ga0307476_108729631	3300031715	Hardwood Forest Soil	AENMDATPEQLWQRIVRENPRASDEDIQCLFISALIDDEDLRLQILERFFKDIRKRLSN
Ga0307474_100550391	3300031718	Hardwood Forest Soil	MDGTPEQLWQRIVRENPRASDEDIQCMSALMDDEDLRLQILERFFKDIRKRLSN
Ga0307474_106002291	3300031718	Hardwood Forest Soil	MDATPEQLWQPIVRENPRASDEDIQCLFISALIDDEDLRLQILERFFKDIRKRLSN
Ga0307474_108950571	3300031718	Hardwood Forest Soil	MDATPEQLWQRIVRENPRASDEDIQCLFISALIDDDDLRLQILERFFKDIRKRLSN
Ga0307474_109954831	3300031718	Hardwood Forest Soil	MDATPEQLWQRIVRENPRTSDEDIQCLFLSALMDNEDLRLQILERFFKDIRKRLSN
Ga0307469_103188321	3300031720	Hardwood Forest Soil	MDATPEQLWRRIVRENPRASDEEIECLFLGAVLDDQDLGLQILERLFKDMRKRLSN
Ga0318501_108046571	3300031736	Soil	MDTAPEQLWQRILMENPRASDEEIEWLFIDAVIDDPDLGLRILKRFFKDIR
Ga0306918_106469931	3300031744	Soil	MTNPRGIIWARNMHDTPEQLWQRIVLENPHASDEDIQCLFMAALIDDWDLRRQLLERFFK
Ga0306918_108668761	3300031744	Soil	MDATPEQLWQRIVRENPRASDKEIEWLFLGAVIDDENLGLQILERFFK
Ga0307477_107499972	3300031753	Hardwood Forest Soil	MDATPEQLWQRIVRENPRASDEDIQCMSALMDDENLRLQILERFFKDIRKRLSN
Ga0318535_104698092	3300031764	Soil	MVDDTPEQLWQRIVKENPRASDEDIQCLFIAALIDDEDLRLQIIERFFKDVRKRVSH
Ga0318509_103955202	3300031768	Soil	MDTAPEQLWQRILMENPRASDEEIEWLFIDAVIDDPDLGLRILKRFFKDIRKGLSN
Ga0318546_107455531	3300031771	Soil	MDATPEQQWQRIVRENPRASDKEIEWLFLGAVIVDEDIGQQILERFFKDMRKRLSN
Ga0318543_104433702	3300031777	Soil	MDTAPEQLWQRILMENPRASDEEIEWLFIDAVIDDPDLGLRILKQFFKDIRKRLSN
Ga0307478_100422093	3300031823	Hardwood Forest Soil	MDGTPEQLWQRIVRENPRASDEDIQCMSALMDDENLRLQILERFFKDIRKRLSN
Ga0306919_100487363	3300031879	Soil	MVDDTPEQLWQRIVKENPRASDEDIQCLFIAALIDDEDLRLQIIERFFKDMRKRLRRRKRLN
Ga0306925_100944392	3300031890	Soil	MDATPEQLWQRIVRENPRASDKEIEWLFLGAVIVDEDIGQQILERFFKDMRKRLSN
Ga0306923_111618091	3300031910	Soil	MDITPEQLWQRIVRENPRASDKEIEFLFLDAVIDDEDLGAQILQQFFKDIRKRLSN
Ga0306923_112436811	3300031910	Soil	QFIWARNMADDTPEQLWQRIVRENPRASDEDIQCRFIAALIDEDNLRLQILERFFKDIRKRLSN
Ga0306921_105882372	3300031912	Soil	MGQKNMHDTPEQLWQRIVLENPHASDEDIQCLFMAALIDDWDLRRQLLERFF
Ga0306921_115369532	3300031912	Soil	MVDDTPEQLWQRIVRENSGASDEDIQCLFIAALIDDDDLRLQIIERFFKDMRKRLSN
Ga0306921_119658951	3300031912	Soil	WQRIVLENPHASDEDIQCLFMAALIDDWDLRRQLLEPFFKDMRKKLLN
Ga0306921_124785351	3300031912	Soil	QLWQRIVLENPHASDEDIQCLFMAALIDDWDLRRQLLERFFKDMRKKLLN
Ga0310912_106852671	3300031941	Soil	MVDNTPEQLWHRIVRENPRASDEDIQCRFIAALIDDDDLRLQIIERFFKDIRKRLSN
Ga0310912_108596712	3300031941	Soil	MVDDTPEQLWQRIVKENPRASDEDIQCLFIAALIDDEDLRLQIIERFFKDIRKRLRRRKRLN
Ga0310916_101478292	3300031942	Soil	MDDTPERLWQRIVDQNPRASDEEIHCLFITALIDDEDLRLQIIERFFKDMRKRLTN
Ga0310916_103682443	3300031942	Soil	MDATPEQLWQRIVRENPRASDKEIEWLFLGAVIVDEDIGQQILERFFKDMR
Ga0310916_115548171	3300031942	Soil	MVDNTPEQLWHRIVRENPRASDEDIQCRFIAALIDEDDLRLQILERFFKDIRKRLSN
Ga0310910_112511721	3300031946	Soil	MADDTPEQLWQRIVRENPRASDEDIQCRFIAALIDEDDLRLQILERFFKDIRKRLSN
Ga0310909_106750001	3300031947	Soil	MVDDTPEQLWQRIVKENPRASDEDIQCLFIAALIDDEDLRLQIIERFFK
Ga0307479_119932202	3300031962	Hardwood Forest Soil	MDATPEQLWQRIVRENPCASDEDVQCLFIAALIDDEDLRLQLLERFFKDIRKRLSN
Ga0306922_122561341	3300032001	Soil	VDATPEQLWQRIVRENPRASDEDIQCLFIGALIDDEDLRRQLLERFFKD
Ga0318559_103278341	3300032039	Soil	MDATPEQLWQRIVRENPRASDKEIEFLFLDAVIDDQDLGAQILQQFFKDIRKKLSN
Ga0318533_103873363	3300032059	Soil	IWAQPESRRNMDDTPERLWQRIVDQNPRASDEEIHCLFITALIDDEDLRLQIIERFFKDMRKRLTN
Ga0318533_104902711	3300032059	Soil	MVDDTPEQLWQRIVKENPRASDEDIQCLFIAALIDDEDLRLQIIERFF
Ga0318510_105286892	3300032064	Soil	NMVDDTPEQLWQRIVKENPRASDEDIQCLFIAALIDDEDLRLQIIERFFKDMRKRLRRRKRLN
Ga0318524_104045921	3300032067	Soil	MVDNTPEQLWHRIVRENPRASDEDIQCRFIAALIDDDDLRLQIIERFFKDMRKRLRRRKRLN
Ga0318524_106626841	3300032067	Soil	MDTAPEQLWQCILMENPRASDEEIEWLFIDAVIDDPDLGLRILKRFFKDIRKRLSN
Ga0306924_103874272	3300032076	Soil	MDITPEQLWQRIVRENPRASDKEIEFLFLDAVIDDQDLGAQILQQFFKDIRKKLSN
Ga0307470_102637863	3300032174	Hardwood Forest Soil	MIDDTPEQLWQRIVRENPRASDEDIQCLFISALIDDEDLRLQIIERFFKDIRKRLSN
Ga0306920_1006782282	3300032261	Soil	MADDTPEQLWQRIVRENPRASDEDIQCRFIAALIDEDNLRLQILERFFKDIRKRLSN
Ga0306920_1012328652	3300032261	Soil	VDATPEQLWQRIVRENPRASDEDIQCLFIGALIDDEDLRLQLLERFFKDMRKRLSN
Ga0306920_1014781391	3300032261	Soil	YLGQNMVDDTPEQLWQRIVRENPRASDEDIQCRFIAALIDHEDLRLQIIERFFKDIRKRLSN
Ga0306920_1015508793	3300032261	Soil	MDTTPEQLWQRIVRENPCASDKEIEWLFLGAVIDDENLGLQILERFFKDIRKRLSN
Ga0306920_1029197152	3300032261	Soil	MVDDTPEQLWQRIVMENPRASDEDIQCLFIAALTDDDDLRLQIIERFFKDVRKRVSH
Ga0310914_108954681	3300033289	Soil	MDITPEQLWQRIVRENPRASDKEIEFLFLDAVIDDEDLGAQILQQFFKDIRKKLSN
Ga0372943_0042087_1406_1588	3300034268	Soil	MFDDAYPEQLWQRLVMEHPRATDEEIQLLFFDALIDNEDLRMVVIERFFDDIRKSLRSLH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F058479

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences