Metagenome / Metatranscriptome Family F058469

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F058469
Family Type	Metagenome / Metatranscriptome
Number of Sequences	135
Average Sequence Length	80 residues
Representative Sequence	MSAYPSWALVCAILGCLGAVILLAWHTAQEQRAGRFDSLIAVVARSQSLALFRAVAIARWACIGVLAVAVVGLIRLVALGAI
Number of Associated Samples	112
Number of Associated Scaffolds	135

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.22 %
% of genes near scaffold ends (potentially truncated)	34.81 %
% of genes from short scaffolds (< 2000 bps)	85.93 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.519 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (22.963 % of family members)
Environment Ontology (ENVO)	Unclassified (34.074 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.741 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.00% β-sheet: 0.00% Coil/Unstructured: 40.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.59
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.59
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 135 Family Scaffolds
PF02885	Glycos_trans_3N	45.93
PF04715	Anth_synt_I_N	11.85
PF00218	IGPS	1.48
PF00486	Trans_reg_C	0.74
PF14023	DUF4239	0.74
PF06418	CTP_synth_N	0.74
PF02735	Ku	0.74

COG ID	Name	Functional Category	% Frequency in 135 Family Scaffolds
COG0147	Anthranilate/para-aminobenzoate synthases component I	Amino acid transport and metabolism [E]	23.70
COG0134	Indole-3-glycerol phosphate synthase	Amino acid transport and metabolism [E]	1.48
COG0504	CTP synthase (UTP-ammonia lyase)	Nucleotide transport and metabolism [F]	0.74
COG1273	Non-homologous end joining protein Ku, dsDNA break repair	Replication, recombination and repair [L]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.52 %
Unclassified	root	N/A	1.48 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.52 %
Unclassified	root	N/A	1.48 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.52 %
Unclassified	root	N/A	1.48 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	62.22 %
Unclassified	root	N/A	1.48 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	60.74 %
Unclassified	root	N/A	1.48 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	42.96 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	17.04 %
Unclassified	root	N/A	1.48 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	42.96 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1.48 %
Unclassified	root	N/A	1.48 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.74 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.74 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	42.96 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1.48 %
Unclassified	root	N/A	1.48 %
Azospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	0.74 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_100701427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	897	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100701864	All Organisms → cellular organisms → Bacteria	1514	Open in IMG/M
3300002245\|JGIcombinedJ26739_101207625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	645	Open in IMG/M
3300002245\|JGIcombinedJ26739_101703994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	529	Open in IMG/M
3300002568\|C688J35102_118924941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	614	Open in IMG/M
3300004081\|Ga0063454_100947169	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300004081\|Ga0063454_101784055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	538	Open in IMG/M
3300004156\|Ga0062589_101851116	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300004633\|Ga0066395_10558718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	666	Open in IMG/M
3300005171\|Ga0066677_10454392	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300005175\|Ga0066673_10317727	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300005177\|Ga0066690_10224137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1256	Open in IMG/M
3300005177\|Ga0066690_10478485	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300005177\|Ga0066690_10813119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	606	Open in IMG/M
3300005181\|Ga0066678_10433078	All Organisms → cellular organisms → Bacteria	874	Open in IMG/M
3300005181\|Ga0066678_11053217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	525	Open in IMG/M
3300005184\|Ga0066671_10919855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	553	Open in IMG/M
3300005186\|Ga0066676_10231530	All Organisms → cellular organisms → Bacteria	1200	Open in IMG/M
3300005332\|Ga0066388_100359579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	2102	Open in IMG/M
3300005355\|Ga0070671_101463426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	604	Open in IMG/M
3300005363\|Ga0008090_13858849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	771	Open in IMG/M
3300005434\|Ga0070709_10277168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1217	Open in IMG/M
3300005434\|Ga0070709_10349901	All Organisms → cellular organisms → Bacteria	1091	Open in IMG/M
3300005435\|Ga0070714_100504972	All Organisms → cellular organisms → Bacteria	1153	Open in IMG/M
3300005435\|Ga0070714_100727579	All Organisms → cellular organisms → Bacteria	958	Open in IMG/M
3300005435\|Ga0070714_101370678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	690	Open in IMG/M
3300005437\|Ga0070710_11015982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	605	Open in IMG/M
3300005445\|Ga0070708_100297878	All Organisms → cellular organisms → Bacteria	1518	Open in IMG/M
3300005450\|Ga0066682_10648686	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300005454\|Ga0066687_10450354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	754	Open in IMG/M
3300005467\|Ga0070706_100138284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2273	Open in IMG/M
3300005471\|Ga0070698_100202426	All Organisms → cellular organisms → Bacteria → Proteobacteria	1921	Open in IMG/M
3300005556\|Ga0066707_10243723	All Organisms → cellular organisms → Bacteria	1171	Open in IMG/M
3300005560\|Ga0066670_10854582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	552	Open in IMG/M
3300005563\|Ga0068855_102240030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	548	Open in IMG/M
3300005566\|Ga0066693_10329783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	612	Open in IMG/M
3300005575\|Ga0066702_10461642	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300005575\|Ga0066702_10718318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	595	Open in IMG/M
3300005587\|Ga0066654_10413911	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300005598\|Ga0066706_10345687	All Organisms → cellular organisms → Bacteria	1178	Open in IMG/M
3300005764\|Ga0066903_101086745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1473	Open in IMG/M
3300005764\|Ga0066903_104965313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	706	Open in IMG/M
3300005764\|Ga0066903_105138921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	693	Open in IMG/M
3300006028\|Ga0070717_10838293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	836	Open in IMG/M
3300006032\|Ga0066696_10052084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2303	Open in IMG/M
3300006034\|Ga0066656_10708663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	646	Open in IMG/M
3300006163\|Ga0070715_10894497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	546	Open in IMG/M
3300006175\|Ga0070712_100688008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	871	Open in IMG/M
3300006176\|Ga0070765_100063479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3069	Open in IMG/M
3300006176\|Ga0070765_100599068	All Organisms → cellular organisms → Bacteria	1039	Open in IMG/M
3300006791\|Ga0066653_10722725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	517	Open in IMG/M
3300006796\|Ga0066665_10188058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1595	Open in IMG/M
3300006796\|Ga0066665_10596140	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300006797\|Ga0066659_10202104	All Organisms → cellular organisms → Bacteria	1455	Open in IMG/M
3300006797\|Ga0066659_11153280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	648	Open in IMG/M
3300006893\|Ga0073928_10000100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	195586	Open in IMG/M
3300006903\|Ga0075426_10077573	All Organisms → cellular organisms → Bacteria	2373	Open in IMG/M
3300006903\|Ga0075426_10905072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	665	Open in IMG/M
3300006904\|Ga0075424_101007418	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300009012\|Ga0066710_100526152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1786	Open in IMG/M
3300009012\|Ga0066710_101710293	All Organisms → cellular organisms → Bacteria	956	Open in IMG/M
3300009137\|Ga0066709_100004349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	11273	Open in IMG/M
3300009137\|Ga0066709_102195718	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300010048\|Ga0126373_11336879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	782	Open in IMG/M
3300010159\|Ga0099796_10019637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2052	Open in IMG/M
3300010321\|Ga0134067_10433742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	533	Open in IMG/M
3300010325\|Ga0134064_10057637	All Organisms → cellular organisms → Bacteria	1203	Open in IMG/M
3300010373\|Ga0134128_10350050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1651	Open in IMG/M
3300011269\|Ga0137392_10074679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2618	Open in IMG/M
3300012189\|Ga0137388_10558664	All Organisms → cellular organisms → Bacteria	1064	Open in IMG/M
3300012199\|Ga0137383_10073267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2469	Open in IMG/M
3300012200\|Ga0137382_10813278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	673	Open in IMG/M
3300012204\|Ga0137374_10632272	All Organisms → cellular organisms → Bacteria	812	Open in IMG/M
3300012205\|Ga0137362_11540329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	551	Open in IMG/M
3300012208\|Ga0137376_10231514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1601	Open in IMG/M
3300012208\|Ga0137376_10427619	All Organisms → cellular organisms → Bacteria	1150	Open in IMG/M
3300012212\|Ga0150985_113566476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	615	Open in IMG/M
3300012351\|Ga0137386_11099226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	561	Open in IMG/M
3300012353\|Ga0137367_11168429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	516	Open in IMG/M
3300012376\|Ga0134032_1118265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	503	Open in IMG/M
3300012582\|Ga0137358_11060409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	520	Open in IMG/M
3300012917\|Ga0137395_10031606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3197	Open in IMG/M
3300012922\|Ga0137394_11075030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	667	Open in IMG/M
3300012923\|Ga0137359_11137554	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300012925\|Ga0137419_10893282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	731	Open in IMG/M
3300012951\|Ga0164300_11204494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	502	Open in IMG/M
3300012971\|Ga0126369_12413128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	612	Open in IMG/M
3300012971\|Ga0126369_13316335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	527	Open in IMG/M
3300012986\|Ga0164304_10728118	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300012989\|Ga0164305_11325337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	630	Open in IMG/M
3300012989\|Ga0164305_11858389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	545	Open in IMG/M
3300014150\|Ga0134081_10116169	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300015241\|Ga0137418_10835233	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300015241\|Ga0137418_11113489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	561	Open in IMG/M
3300015371\|Ga0132258_10381064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3498	Open in IMG/M
3300015372\|Ga0132256_100917949	Not Available	992	Open in IMG/M
3300018027\|Ga0184605_10507436	Not Available	524	Open in IMG/M
3300018431\|Ga0066655_10314488	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300018433\|Ga0066667_10414864	All Organisms → cellular organisms → Bacteria	1092	Open in IMG/M
3300018468\|Ga0066662_11690405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	662	Open in IMG/M
3300018482\|Ga0066669_10428598	All Organisms → cellular organisms → Bacteria	1129	Open in IMG/M
3300020583\|Ga0210401_10183428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1949	Open in IMG/M
3300021168\|Ga0210406_10965532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	637	Open in IMG/M
3300021358\|Ga0213873_10008998	All Organisms → cellular organisms → Bacteria	2059	Open in IMG/M
3300021478\|Ga0210402_11503296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	601	Open in IMG/M
3300021560\|Ga0126371_10505303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1357	Open in IMG/M
3300022557\|Ga0212123_10000206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	201798	Open in IMG/M
3300025922\|Ga0207646_11770355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	529	Open in IMG/M
3300025929\|Ga0207664_10355940	All Organisms → cellular organisms → Bacteria	1296	Open in IMG/M
3300025931\|Ga0207644_11071343	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300026304\|Ga0209240_1064038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1374	Open in IMG/M
3300026305\|Ga0209688_1017932	All Organisms → cellular organisms → Bacteria	1363	Open in IMG/M
3300026312\|Ga0209153_1043996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1567	Open in IMG/M
3300026314\|Ga0209268_1093354	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300026316\|Ga0209155_1060204	All Organisms → cellular organisms → Bacteria	1455	Open in IMG/M
3300026490\|Ga0257153_1010640	All Organisms → cellular organisms → Bacteria	1839	Open in IMG/M
3300026508\|Ga0257161_1105455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	588	Open in IMG/M
3300026542\|Ga0209805_1217848	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300026550\|Ga0209474_10054899	All Organisms → cellular organisms → Bacteria	2833	Open in IMG/M
3300026551\|Ga0209648_10695430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	555	Open in IMG/M
3300026552\|Ga0209577_10604348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	656	Open in IMG/M
3300026555\|Ga0179593_1143047	All Organisms → cellular organisms → Bacteria	2351	Open in IMG/M
3300027480\|Ga0208993_1067539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	650	Open in IMG/M
3300027616\|Ga0209106_1028429	All Organisms → cellular organisms → Bacteria → Proteobacteria	1231	Open in IMG/M
3300027669\|Ga0208981_1010706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2324	Open in IMG/M
3300027684\|Ga0209626_1174094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	570	Open in IMG/M
3300028047\|Ga0209526_10038723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3355	Open in IMG/M
3300028906\|Ga0308309_11508892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	574	Open in IMG/M
3300030998\|Ga0073996_12325217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	573	Open in IMG/M
3300031716\|Ga0310813_10955823	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	779	Open in IMG/M
3300031754\|Ga0307475_10413265	All Organisms → cellular organisms → Bacteria	1084	Open in IMG/M
3300031962\|Ga0307479_10577553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1106	Open in IMG/M
3300031962\|Ga0307479_11411297	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300032180\|Ga0307471_100759619	All Organisms → cellular organisms → Bacteria	1136	Open in IMG/M
3300033475\|Ga0310811_10180121	All Organisms → cellular organisms → Bacteria	2613	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.59%
Host-Associated	Host-Associated	7.41%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.37%
Plants	Host-Associated → Plants	7.41%
Aquatic	Environmental → Aquatic	2.22%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.37%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.19%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.22%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.48%
Sediment	Environmental → Aquatic → Sediment	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.44%
Loam	Environmental → Terrestrial → Soil → Loam	25.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.22%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.96%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.74%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.74%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	30.37%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.19%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.11%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.37%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.41%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	4.44%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.22%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.96%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.74%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.74%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	22.96%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	14.07%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	7.41%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.41%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.44%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	4.44%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.70%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.22%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.22%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.96%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.48%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.48%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.74%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.74%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.74%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.74%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.74%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012376	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021358	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3	Host-Associated	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026305	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027480	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027616	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027669	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030998	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1007014273	3300000364	Soil	MSAYPSWALLCGILGCLGAVILLAWHTAQEQRAGRFDSLVAVVARSQSLVLFRAIAIARWACIGVLAIAVVGLIRLFAQGAI*
INPhiseqgaiiFebDRAFT_1007018642	3300000364	Soil	MSAYPSWALLCGILGCLGAVILLAWHTAQEQRAGRFDSLVAVVARSQSLVLFRAIAIARWTCIGVLAIAVVGLIRMFAQGVI*
JGIcombinedJ26739_1012076251	3300002245	Forest Soil	MSAYPSWALLCGXLGCLGAVILLAWHTAQEQRAGRFDSLVAVVARSQSLVLFRAVAIARWTCISVLGIAVIGLIRLFALGAI*
JGIcombinedJ26739_1017039941	3300002245	Forest Soil	MSGYPSWALLCGIVGCLGAVILFAVHTAQEQRAGRFDSLVAVVARSQSLALFRAIAIARWSCIAALAIATLVLLRWFALGAI*
C688J35102_1189249411	3300002568	Soil	MSAYPAWALICAILGCIGAVALLAWNTAQEQRAGRFDSLIAVVARSQSLALFRAVAIARWACIGVLAVAVVGLIRLVALGAI*
Ga0063454_1009471691	3300004081	Soil	MSAYPSWALLCGILGCLGAVVLLAWHTAQEQRAGRFDSLVAVVARSQSLVLFRAVAIARWTCIGVLAVAV
Ga0063454_1017840551	3300004081	Soil	MSAYPSWALFCGILGCLGAVILLAWHTAQEQRAGRFDSLVAVVARSQSLVLFRAVAIARWTCIGVLAIAVVGLIRLFAQGAI*
Ga0062589_1018511162	3300004156	Soil	ICAILGCIGAVALLAWNTAQEQRAGRFDSLIARVTRAQSLALFRAVAIARWACIGVLAIAVVGLIRLVALGEI*
Ga0066395_105587182	3300004633	Tropical Forest Soil	MSGYPSWVQICAILGCLGAVILLAWNTAQEQRAGRFDSLIARVNRAQSLGLFRAVAIARWTCISVLAIAVIGLIRLYALGQI*
Ga0066677_104543921	3300005171	Soil	MSAYPSWALLCGILGCLGAVVLLAWHTAQEQRAGRFDSLVAVVARSQSLVLFRAVAIARWTCIGVL
Ga0066673_103177272	3300005175	Soil	MSAYPSWALLCGILGCLGAVILLAWHTAQEQRAGRFDSLVAVVARSQSLVLFRAVAIARWTCIGVLAVAVLGLIRLFAEGAI*
Ga0066690_102241372	3300005177	Soil	MSGYPSWALACAILGCLGAVILLAWHTAQEQRAGRFDSLVAVVARTQSLALFRAIAIARWSCISALAIATLVLLRWFALGIL*
Ga0066690_104784851	3300005177	Soil	MSAYPAWALICAILGCIGAVALLAWNTAQEQRAGRFDSLIAVVARSQSLALFRAVAIARWACIGVLAVAVVG
Ga0066690_108131191	3300005177	Soil	MSAYPPWALLCGIAGCLGAVILFALHTAQEQRAGQFNSLVAVVARSQSLALFRAIAIARWACIGTLAIAIAALVRLFVLSEM*
Ga0066678_104330782	3300005181	Soil	WALICAILGCIGAVALLAWNTAQEQRAGRFDSLIAVVARSQSLALFRAVAIARWACIGVLAVAVVGLIRLVALGAI*
Ga0066678_110532171	3300005181	Soil	MSGYPSWALACAILGCLGAVVLLAWHTAQEQRAGRFDSLVAVVARTQSLALFRAIAIARWSCISALAIATLVLLRWFALGIL*
Ga0066671_109198551	3300005184	Soil	MSAYPSWALICAILGCTGAVGLLAWNTAQEQRAGRFDSLIAVVARSQSLALFRAVAIARWACIGVLAVAVVGLIRLVALGA
Ga0066676_102315301	3300005186	Soil	MSAYPAWALICAILGCMGAVGLLAWNTAQEQRAGRFDSLIAVVARSQSLALFRAVAIARWACIGVLAVAVVGLIRLVALGAI*
Ga0066388_1003595791	3300005332	Tropical Forest Soil	MSGYPSWVLICAILGCLGAVILLAWNTAQEQRAGRFDSLIARVNRAQSLALFRAVAIARWACIGILAIAVVGLIRAFALGQI*
Ga0070671_1014634262	3300005355	Switchgrass Rhizosphere	ALICAILGCIGAVALLAWNTAQEQRAGRFDSLIARVTRAQSLALFRAVAIARWACIGVLAIAVVGLIRLVALGEI*
Ga0008090_138588491	3300005363	Tropical Rainforest Soil	MLAYPAWATICAILGCLGAVILLVWNTAQEQRAGRFDSFIAVVSRSQSLVLFRAVAIARWTCIGVLALAVLGLLRRLAEAAI*
Ga0070709_102771682	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSAYPTWALICAILGCIGAVALLAWNTAQEQRAGRFDSLIARVTRAQSLALFRAVAIARWACIGVLAIAVVGLIRLVALGEI*
Ga0070709_103499011	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSAYPSWALICAILGCIGAVVLLAWNTAQEQRAGRFDSLIARVTRAQSLALFRAVAIARWACIGVLAIAVVGLIRLVALGEI*
Ga0070714_1005049721	3300005435	Agricultural Soil	MSAYPSWALICAILGCIGAVALLAWNTAQEQRAGRFDSLIARVTRAQSLALFRAVAIARWACIGVLAVAVVGLIRLVALGEI*
Ga0070714_1007275792	3300005435	Agricultural Soil	CIGAVALLAWNTAQEQRAGRFDSLIARVTRAQSLSLFRAVAIARWACIGVLAIAVVGLIRLVALGEI*
Ga0070714_1013706781	3300005435	Agricultural Soil	MSAYPTWALICAILGCIGAVALLAWNTAQEQRAGRFDSLIARVTRAQSLALFRAVAIARWACIGVLAIAVVGLIRLVAFGEI*
Ga0070710_110159821	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MSAYPSWALLCGILGCLGAVILLAWHTAQEQRAGRFDSLVAVVARSQSLVLFRAVAIARWTCISVLGIAVMGLIRLFALGAI*
Ga0070708_1002978782	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSAYPSWALLCGILGCLGAVILLAWHTAQEQRAGRFNSLVAVVARSQSLVLFRAIAIARWTCIGVLAIAVVGLIRMFAQGAI*
Ga0066682_106486862	3300005450	Soil	YPSWALVCAILGCLGAVILLAWHTAQEQRAGRFDSLIAVVARSQSLALFRAVAIARWACIGVLAVAVVGLIRLVALGAI*
Ga0066687_104503541	3300005454	Soil	MSAYPSWALLCGILGCLGAVILLAWHTAQEQRAGRFDSLVAVVARSQSLVLFRAVAIARWTCIGVLAIAVVGLIRLFAQGAI*
Ga0070706_1001382843	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSAYPSWALLCGILGCLGAVILLAWHTAQEQRAGRFDSLVAVVARSQSLVLFRAIAIARWTCIGVLAIAVVGLIRMFAQGAI*
Ga0070698_1002024262	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MSAYPSWALLCGILGCLGAVILLAWHTAQEQRAGRFDSFVAVVARSQSLVLFRAIAIARWTCIGVLAIAVVGLIRMFAQGAI*
Ga0066707_102437231	3300005556	Soil	MSSYPSWALACAILGCLGAVVLLAWHTAQEQRAGRFDSLVAVVARTQSLALFRAIAIARWSCISALAIATLVLLRWFAL
Ga0066670_108545821	3300005560	Soil	SMSAYPSWTLLCGILGCLSAVVLLAWHTAQEQRAGRFDSLVAVVARSQSLVLFRAVAIARWTCIGVLAIAVVGLIRLFAQGAI*
Ga0068855_1022400301	3300005563	Corn Rhizosphere	MSAYPTCALICAILGCIGAVALLAWNTAQEQRAGRFDSLIARVTRAQSLALFRAVAIARWACIGVLAIAVVGLIRLVALGEI*
Ga0066693_103297832	3300005566	Soil	MSAYPSWALICAILGCTGAVGLLAWNTAQEQRAGRFDSLIAVVARSQSLALFRAVAIARWACIGVLAVAVVGLIRLVALGAI*
Ga0066702_104616422	3300005575	Soil	MSTYPSWALLCGIVGCLGAVILLAVNTAQEQRAGQFNSLVAVVARAQSLTLFRAIAIARWSCIGALA
Ga0066702_107183182	3300005575	Soil	MSAYPPWALLCGIAGCLGAVILFAVHTAQEQRAGQFNSLVAVVARSQSLALFRAIAIARWACIGTLAIAIAALVRLFVLSEM*
Ga0066654_104139111	3300005587	Soil	MSAYPSWALICAILGCIGAVALLAWNTAQEQRAGRFDSLIARVTRAQSLALFRAVAIARWACIGVLAIAVVGLIRLVAL
Ga0066706_103456871	3300005598	Soil	MSAYPAWALICAILGCIGAVALLAWNTAQEQRAGRFDSLIAVVARSQSLALFRAVAIARWACIGVLAVAVVGLIR
Ga0066903_1010867452	3300005764	Tropical Forest Soil	MGVTTPATLWVICAILAGIGTVILLAWRTAQEQRAGRFDSLIARVNRAQSLALFRAVAIARWTCIGVLAVVIFDLIRLFTFDHI*
Ga0066903_1049653132	3300005764	Tropical Forest Soil	MSGYPTWVLICAILGCFGAVILLAWNTAQEQRAGRFDSLIAVVARSQSLALFRAVAIARWACIGVLAIAVVGLIRLVALGEI*
Ga0066903_1051389212	3300005764	Tropical Forest Soil	MLAYPAWATICAILGCLGAVILLAWNTAQEQRAGRFDSFIAVVSRSQSLVLFRAVAIARWTCIGVLALAVLGLLRRLAEAAI*
Ga0070717_108382932	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSAYPSWALICAILGCIGAVALLAWNTAQEQRAGRFDSLIARVTRAQSLALFRAVAIARWACIGVLAIAVVGLIRLVALGEI*
Ga0066696_100520842	3300006032	Soil	MSGYPSWALICAILGCLGAVILLAWNTAQEQRAGRFDSLIARVTRSQSLLLFRAVAITRWTCIGVLAIAVVGLIRLVAMGAI*
Ga0066656_107086631	3300006034	Soil	MSAYPSWALICAILGCIGAVALLAWNTAQEQRAGRFDSLIARVTRAQSLALFRAVAIARWACIGVLAVAVVGLIRLVALGAI*
Ga0070715_108944972	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MSAYPTWALICAILGCIGAVALLAWNTAQEQRAGRFDSLIARVTRVQSLALFRAVAIARWACIGVLAVAVVGLIRLVALG
Ga0070712_1006880081	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MSAYPSWALLCGILGCLGAVILLAWHTAQEQRAGRFDSLVAVVARSQSLVLFRAVAIARWTCISVLGIAVIGLIRLFALGAI*
Ga0070765_1000634792	3300006176	Soil	MSAYPSWALLCGIAGCLGAVILLGVQTAQEQRAGRFDSLVAVVARSQSLALFRAIAIARWACIAALAIATLVLLRWFALGAI*
Ga0070765_1005990681	3300006176	Soil	MSAYPSWALICAILGCLGAVILLAWHTAQEQRAGRFDSLIAVVARSQSLVLFRAVAIARWTCIGGLAVAVVGLIRLVALGAI*
Ga0066653_107227251	3300006791	Soil	MSAYPSWALLCGILGCLGAVVLLAWHTAQEQRAGRFDSLVAVVARSQSLVLFRAVAIARWTCIGVLAIAVVGLIRLFAQGAI*
Ga0066665_101880582	3300006796	Soil	MSAYPSWALVCAILGCLGAVILLAWHTAQEQRAGRFDSLIAVVARSQSLALFRAVAIARWACIGVLAVAVVGLIRLVALGAI*
Ga0066665_105961401	3300006796	Soil	MSAYPSWALLCGILGCFGAVILLAVHTAQEQRAGRFDSLVAVVARSQSLALFRAVAIARWACIATFAIAILGLIRLFALGAS*
Ga0066659_102021042	3300006797	Soil	MSAYPAWALICAILGCIGAVGLLAWNTAQEQRAGRFDSLIAVVARSQSLALFRAVAIARWACIGVLAVAVVGLIRLVALGAI*
Ga0066659_111532802	3300006797	Soil	MSAYPSWALICAILGCTGAVGLLAWNTAQEQRAGRFDSLIAVVARSQSLALFRAVAIARWASIGVLAVAVVGLIRLVALGAI*
Ga0073928_10000100161	3300006893	Iron-Sulfur Acid Spring	MSAYSSWALICAILGCLGAVILLAWNTAQEQRAGRFDSLIAVVARSQSVVLFRAVAIARWTCIGVLAVAVVGLIRLVALGAI*
Ga0075426_100775731	3300006903	Populus Rhizosphere	MSADPSWALICAILGCIGAVALLAWNTAQEQRAGRFDSLIARVTRAQSLALFRAVAIARWACIGVLAIAVVGLIRLVALGEI*
Ga0075426_109050721	3300006903	Populus Rhizosphere	MSAYPTWALICAILGCIGAVALLAWNTAQEQRAGRFDSLIARVTRAQSLALFRAVAIARWACIGVLAIAVVGLIRLVALGE
Ga0075424_1010074182	3300006904	Populus Rhizosphere	MSAYPSWALLCGILGCLGAVILLAWHTAQEQRTGRFDSLIAVVARSQSLVLFRAVAIARWACIGVLAIAVVGLIRLFAQSAI*
Ga0066710_1005261522	3300009012	Grasslands Soil	MSSYPSWALACAILGCLGAVILLAWHTAQEQRAGRFDSLVAVVARTQSLALFRAIAIARWSCISALAIATLVLLRWFALGIL
Ga0066710_1017102932	3300009012	Grasslands Soil	MSAYPSWALLCGILGCLGAVILLAWHTAQEQRAGRFDSLVAVVARSQSLVLFRAVAIARWTCIGVLAIAVVGLIRLFAQGAI
Ga0066709_1000043492	3300009137	Grasslands Soil	MSAYPSWALLCGILGCLGAVILLAWHTAQEQRAGRFDSLVAVVARSQSLVLFRAVAIARWTCIGVLAVAVVGLIRLFAQGAI*
Ga0066709_1021957181	3300009137	Grasslands Soil	MSAYPSWALLCGILGCLGAVILLAWHTAQEQRAGRFDSLVAVVARSQSLVLFRAVAIARWTCIGVLAVAVLGLIRLFAEGA
Ga0126373_113368793	3300010048	Tropical Forest Soil	MGVTTPATLWVICAILSCIGTVILLAWRTAQEQRAGRFDSLIARVNRAQSLALFRAVAIARWTCIGVLAAVIFDLIRLLTFDHI*
Ga0099796_100196372	3300010159	Vadose Zone Soil	MSAYPSWALLCGILGCLGAVILLAWHTAQEQRAGRFDSLVAVVARSQSLVLFRAVAIARWACISVLGIAVIGLIRLFALGAI*
Ga0134067_104337422	3300010321	Grasslands Soil	MSAYPSWALLCGILGCLGAVVLLAWHTAQEQRAGRFDSLIAVVPRSQSLVLFRAVAIARWTCIGVLAIAVVGLIRLFAQGA
Ga0134064_100576371	3300010325	Grasslands Soil	MSAYPSWALVCAILGCLGAVILLAWHTAQEQRAGRFDSLIAVVARSQSLALFRAVAIARWACIGVLAVA
Ga0134128_103500502	3300010373	Terrestrial Soil	MSAYPTWALICAILGCIGAVALLAWNTAQEQRAGRFDSLIARVTRAQSLALFRAVAIARWACIGVLAVAVVGLIRLVALGEI*
Ga0137392_100746792	3300011269	Vadose Zone Soil	MSAYPSWALLCGIVGCLGAVILLAVHTAQEQRAGRFDSLVAVVARSQSLALFRAIAIARWACIGVFTIAVAALVRLFALGIL*
Ga0137388_105586641	3300012189	Vadose Zone Soil	MSAYPSWALLCGIVGCLGAVILLAVHTAQEQRAGRFDSLVAVVARSQSLALFRAIAIARWACIGVFPIAVAALVPLFPLGIL*
Ga0137383_100732672	3300012199	Vadose Zone Soil	MSAYPAWALICALRGCIGAVALLAWNTAQEQRAGRFDSLIAVVARSQSLALFRAVAIARWACIGVLAVAVVGLIRLVALGAI*
Ga0137382_108132782	3300012200	Vadose Zone Soil	MSTYPSWALLCGIVGCLGAVVLLALNTAQEQRAGRFDSLVAVVARSQSLALFRAVAIARWPCIGTLAIAPLALIRVFALGAI*
Ga0137374_106322721	3300012204	Vadose Zone Soil	MAAYPSWALLCGILGCLGAVILLAVNTAQEQRAGQFNSLVAVVARTQSLALFRAIAIARWACIGALAIAVVGLIRLFALGAI*
Ga0137362_115403291	3300012205	Vadose Zone Soil	MSTYPLWALLCGIVGCLGAVILLAVHTAQEQRAGRFDSLVAVVARSQSLALFRAIAIARWACIGALAIATLVLLRWFALGAW*
Ga0137376_102315143	3300012208	Vadose Zone Soil	MSAYPAWALICAILGRISAAALLAWNTAQEQRAGRFDSLITVVARSQSLALFRAVAIARWACIGVLAVAVVGLIR
Ga0137376_104276192	3300012208	Vadose Zone Soil	MSAYPSWALLCGIVGCLGAVVLLALNTAQEQRAGRFDSLVAVVARSQSVALFRAVAIARWACIGTLAIATLALIRVFALGAI*
Ga0150985_1135664761	3300012212	Avena Fatua Rhizosphere	MSAYPSWTLLCGILGCLGAVILLAWHTAQEQRAGRFDSLVAVVARSQSLVLFRAVAIARWTCIGVLAVAVVGLIRLFAQGAI*
Ga0137386_110992262	3300012351	Vadose Zone Soil	MSSYPSWALACAILGCLGAVILLAWHTAQEQRAGRFDSLVAVVARSQSLALFRAVAIARWACIGTL
Ga0137367_111684291	3300012353	Vadose Zone Soil	EKCGGSMAAYPSWALLCGILGCLGAVILLAVNTAQEQRAGQFNSLVAVVARTQSLALFRAIAIARWACIGALAIAVVGLIRLFALGAI*
Ga0134032_11182651	3300012376	Grasslands Soil	SWALLCGILGCLGAVILLAWHTAQEQRAGRFDSLVAVVARSQSLVLFRAVAIARWTCIGVLAVAVLGLIRLFAEGAI*
Ga0137358_110604091	3300012582	Vadose Zone Soil	MSTYPSWALLCGIVGCLGAVVLLALNTAQEQRAGRFDSLVAVVARSQSVALFRAVAIARWACIGVFTIAIAALVRLFALGML*
Ga0137395_100316062	3300012917	Vadose Zone Soil	MSAYPAWALICAILGCIGAVALLAWNTAQEQRAGRFDSLIAVVARSQSLALFRAVAITRWTCIGVLAIAVVGLIRLVALGAI*
Ga0137394_110750302	3300012922	Vadose Zone Soil	MSTYPSWALLCGIVGCLGAVVLLALNTAQEQRAGRFDSLVAVVARSQSLALFRAVAIARWACIGTLTIATLALIRVFALGVI*
Ga0137359_111375542	3300012923	Vadose Zone Soil	MSAYPSWALLCGILGCLGAVILLAWHTAQEQRAGRFDSLVAVVARSQSLVLFRAVAIARWTCIGVLAIAVVGLIRLFA
Ga0137419_108932822	3300012925	Vadose Zone Soil	MSTYPSWALLCGIVGCLGAVVLLALNTAQEQRAGRFDSLVAVVARSQSAALFRAVAIARWACIGTLAIATLALIRVFALGAI*
Ga0164300_112044941	3300012951	Soil	MSAYPVWALICAILGCVGAVGLLAWNTAQEQRAGRFDSLIAVVARSQSLALFRAVAITRWACIGVLAVAVVGLIRLVALGAI*
Ga0126369_124131281	3300012971	Tropical Forest Soil	RVGTMGVTTPDTLWIICAILSCIGTVILLAWRTVQEQRAGRFDSLIARVNRSQSLALFRAVAIARWTCIGVLAAVIFGLIRLLTFDHI*
Ga0126369_133163351	3300012971	Tropical Forest Soil	MSGYPSWVQICAILGCLGAVILLAWNTAQEQRAGRFDSLIARVNRAQSLGLFRAVAIARWTCISVLAIA
Ga0164304_107281181	3300012986	Soil	NRRKGGSMSAYPAWALICATLGCIGAVALLAWNTAQEQRAGRFDSLIARVTRAQSLALFRAVAITRWACIGVLAVAVVGLIRLVALGAI*
Ga0164305_113253372	3300012989	Soil	MSVYPSWALLCGILGCLGAVILLAWHTAQEQRAGRFDSLVAVVARSQSLVLFRAIAIARWACIGVLAIAVVGLIRLFAQG
Ga0164305_118583891	3300012989	Soil	GGSMSAYPAWALICAILGCMGAVGLLAWNTAQEQRAGRFDSLIAVVARSQSLALFRAVAITRWACIGVLAVAVVGLIRLVALGAI*
Ga0134081_101161692	3300014150	Grasslands Soil	MSAYPSWALICAILGCIGAVGLLAWNTAQEQRAGRFDSLIAVVARSQSLALFRAVAIARWACIGVLAVAVVGLIRLVALGAI*
Ga0137418_108352331	3300015241	Vadose Zone Soil	MSTYPSWALLCGIVGCLGAVVLLALNTAQEQRAGRFDSLVAVVARSQSLALFRAVAIARWACFGTLAIAT
Ga0137418_111134891	3300015241	Vadose Zone Soil	MSAYPSWALLCGILGCFGAVVLLAWHTAQEQRAGRFDSLVAVVARSQSLVLFRAVAIARWTCIGVLAIAVVGLIRLFAQGAI*
Ga0132258_103810643	3300015371	Arabidopsis Rhizosphere	CLGAVILLAWHTAQEQRAGRFDSLIAVVARSQSLVLFRAVAIARWTCIGVLAIAVVGLIRLFAQGAI*
Ga0132256_1009179492	3300015372	Arabidopsis Rhizosphere	MSAYPSWALLCGILGCLGAVILLAWHTAQEQRAGRFDSLIAVVARSQSLVLFRAVAIARWTCIGVLAIAVVGLIRLFAQSAI*
Ga0184605_105074361	3300018027	Groundwater Sediment	MSAYPAWALICAILGCIGAVALLAWNTAQEQRAGRFDSLIAVVARSQSLALFRAVAIARWACIGVLAVAVVGLIRLVALGAI
Ga0066655_103144882	3300018431	Grasslands Soil	MSAYPAWALICAILGCMGAVGLLAWNTAQEQRAGRFDSLIARVTRAQSLALFRAVAIARWACIGVLAVAVVGLIRLVALGAI
Ga0066667_104148642	3300018433	Grasslands Soil	MSAYPSWALLCGILGCLGAVILLAWHTAQEQRAGRFDSLVAVVARSQSLVLFRAVAIARWTCIGVLAVAVVGLIRLFAQGAI
Ga0066662_116904052	3300018468	Grasslands Soil	MSAYPAWALICAILGCIGAVVLLAWNTAQEQRAGRFDSLIAVVARSQSLALFRAVAIARWACIGVLAVAVVGLIRLVALGAI
Ga0066669_104285981	3300018482	Grasslands Soil	MSAYPSWALLCGILGCLGAVVLLAWHTAQEQRAGRFDSLIAVVPRSQSLVLFRAVAIARWTCIGVLAIAVVGLIRLFAQGAI
Ga0210401_101834282	3300020583	Soil	MSAYPSWALLCGIAGCLGAVILLGVQTAQEQRAGRFDSLVAVVARSQSLALFRAIAIARWACIAALAIATLVLLRWFALGAI
Ga0210406_109655321	3300021168	Soil	MSAYPSWALLCGILGCLGAVILLAWHTAQEQRAGRFDSLVAVVARSQSLVLFRAVAIARWTCISVLGIAVIGLIRLF
Ga0213873_100089982	3300021358	Rhizosphere	MSAYPLWALVCAILGCFGAVILLAWNTAQEQRAGRFDSLIAVVARSQSLALFRAVAIARWTCIGVLAIAVVGLIRLVALGAV
Ga0210402_115032962	3300021478	Soil	MSAYPSWALLCGILGCLGAVILLAWHTAQEQRAGRFDSLVAVVARSQSLVLFRAVAIARWTCISVLGIAVI
Ga0126371_105053032	3300021560	Tropical Forest Soil	MSGYPSWVQICAILGCLGAVILLAWNTAQEQRAGRFDSLIARVNRAQSLGLFRAVAIARWTCISVLAIAVIGLIRLYALGQI
Ga0212123_10000206159	3300022557	Iron-Sulfur Acid Spring	MSAYSSWALICAILGCLGAVILLAWNTAQEQRAGRFDSLIAVVARSQSVVLFRAVAIARWTCIGVLAVAVVGLIRLVALGAI
Ga0207646_117703551	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSAYPSWALLCGILGCLGAVILLAWHTAQEQRAGRFDSLVAVVARSQSLVLFRAIAIARWTCIGVLAIAVVGLIRMFAQGAI
Ga0207664_103559402	3300025929	Agricultural Soil	CAILGCIGAVVLLAWNTAQEQRAGRFDSLIARVTRAQSLALFRAVAIARWACIGVLAIAVVGLIRLVALGEI
Ga0207644_110713432	3300025931	Switchgrass Rhizosphere	PTWALICAILGCIGAVALLAWNTAQEQRAGRFDSLIARVTRAQSLALFRAVAIARWACIGVLAIAVVGLIRLVALGEI
Ga0209240_10640382	3300026304	Grasslands Soil	MSAYPSWALLCGILGCLGAVILLAWHTAQEQRAGRFDSLVAVVARSQSLVLFRAVAIARWTCISVLAIAVLGLI
Ga0209688_10179322	3300026305	Soil	MSAYPAWALICAILGCIGAVALLAWNTAQEQRAGRFDSLIAVVARSQSLALFRAVAIARWACIGVLAVAVVGLIRLV
Ga0209153_10439962	3300026312	Soil	MSAYPSWALICAILGCTGAVGLLAWNTAQEQRAGRFDSLIAVVARSQSLALFRAVAIARWACIGVLAVAVVGLIRLVALGAI
Ga0209268_10933541	3300026314	Soil	MSAYPAWALICAILGCIGAVALLAWNTAQEQRAGRFDSLIAVVARSQSLALFRAVAIARWACIGVL
Ga0209155_10602041	3300026316	Soil	MSAYPSWALLCGILGCLGAVILLAWHTAQEQRAGRFDSLVAVVARSQSLVLFRAVAIARWTCIGVLAVAVLGLIRLFAEGAI
Ga0257153_10106402	3300026490	Soil	MSAYPSWALLCGLLGCLGAVILLAWHTAQEQRAGRFDSLVAVVARSQSLVLFRAVAIARWTCISVLGIAVIGLIRLFALGAI
Ga0257161_11054551	3300026508	Soil	MSAYPSWALLCGILGCLGAVILLAWHTAQEQRAGRFDSLVAVVARSQSLVLFRAVAIARWTCISVLGIAVIGLIRLFALGA
Ga0209805_12178482	3300026542	Soil	AILGCIGAVALLAWNTAQEQRAGRFDSLIAVVARSQSLALFRAVAIARWACIGVLAVAVVGLIRLVALGAI
Ga0209474_100548992	3300026550	Soil	MSAYPAWALICAILGCAGAVALLAWNTAQEQRAGRFDSLIAVVARSQSLALFRAVAIARWACIGVLARCTGRDLTGRLP
Ga0209648_106954302	3300026551	Grasslands Soil	LGAVILFAVHTAQEQRAGRFDSLVAVVARSQSLVLFRAVAIARWTCISVLGIAVIGLIRLFALGAI
Ga0209577_106043481	3300026552	Soil	MSGYPSWALACAILGCLGAVVLLAWHTAQEQRAGRFDSLVAVVARTQSLALFRAIAIARWSCISALAIATLVLLRWFALGIL
Ga0179593_11430473	3300026555	Vadose Zone Soil	MSAYPAWALICAILGCIGAVALLAWNTAQEQRAGRFDSLIAVVARPQSLALFRAVAIARWACIGVLAIAVVGLIRLVALGAI
Ga0208993_10675391	3300027480	Forest Soil	MSAYPSWALLCGILGCLGAVVLLAWHTAQEQRAGRFDSLVAVVARSQSLVLFRAVAIARWTCISVLGIAVIGLIRLFALGAI
Ga0209106_10284293	3300027616	Forest Soil	WALLCGILGCLGAVILLAWHTAQEQRAGRFDSLVAVVARSQSLVLFRAVAIARWTCISVLGIAVIGLIRLFALGAI
Ga0208981_10107061	3300027669	Forest Soil	MSAYPSWALLCGILGCLGAVILLAWHTAQEQRAGRFDSLVAVVARSQSLVLFRAVAIARWTCISVLGIAVIGLIRLFALGAL
Ga0209626_11740941	3300027684	Forest Soil	PSWALLCGILGCLGAVILLAWHTAQEQRAGRFDSLVAVVARSQSLVLFRAVAIARWTCISVLGIAVIGLIRLFALGAI
Ga0209526_100387232	3300028047	Forest Soil	MSGYPSWALLCGIVGCLGAVILFAVHTAQEQRAGRFDSLVAVVARSQSLALFRAVAIARWSCIAALAIATLVLLRWFALGAI
Ga0308309_115088921	3300028906	Soil	MSAYPSWALLCGIVGCLGAVILLGVQTAQEQRAGRFDSLVAVVARSQSLALFRAIAIARWACITALAIATLVLLRWFALGAI
Ga0073996_123252171	3300030998	Soil	MSAYPSWTLLCGILGCLGAVILLAWHTAQEQRAGSFDSLVAVVARSQSLVLFRAVAIARWTCISVLGIAVIGLIRLFAIGAI
Ga0310813_109558232	3300031716	Soil	MSAYPSWALICAILGCIGAVVLLAWNTAQEQRAGRFDSLIARVTRAQSLALFRAVAIARWACIGVLAVAVVGLIRLVALGEI
Ga0307475_104132651	3300031754	Hardwood Forest Soil	CAILGCLGAVILLAWHTAQEQRAGRFDSLIAVVARSQSLVLFRAVAIARWTCIGGLAVAVVGLIRLVALGAI
Ga0307479_105775532	3300031962	Hardwood Forest Soil	MSAYPSWALICAILGCLGAVILLAWHTAQEQRAGRFDSLIAVVARSQSLVLFRAVAIARWTCIGGLAVAVVGLIRLVALGAI
Ga0307479_114112972	3300031962	Hardwood Forest Soil	AYPSWALICAILGCLGAVILLAWHTAQEQRAGRFDSLIAVVARSQSLMLFRAVAIARWTCIGGLAVAVVGLIRLVALGAI
Ga0307471_1007596191	3300032180	Hardwood Forest Soil	MSAYPSWALLCGILGCLGAVILLAWHTAQEQRAGRFDSLVAVVARSQSLVLFRAIAIARWACIGVLAIAVVGLIRLFAQGAI
Ga0310811_101801212	3300033475	Soil	YPSWALICAILGCIGAVALLAWNTAQEQRAGRFDSLIARVTRAQSLALFRAVAIARWACIGVLAIAVVGLIRLVALGEI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F058469

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences