Basic Information | |
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Family ID | F058431 |
Family Type | Metagenome |
Number of Sequences | 135 |
Average Sequence Length | 44 residues |
Representative Sequence | MASEIRVNKINNRAGLGTVTYTDTGIIVSGIVTANSFK |
Number of Associated Samples | 93 |
Number of Associated Scaffolds | 135 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 17.16 % |
% of genes near scaffold ends (potentially truncated) | 97.04 % |
% of genes from short scaffolds (< 2000 bps) | 82.22 % |
Associated GOLD sequencing projects | 89 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.22 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (44.444 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine (50.370 % of family members) |
Environment Ontology (ENVO) | Unclassified (85.926 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (94.815 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100. |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 0.00% β-sheet: 18.18% Coil/Unstructured: 81.82% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.22 |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Freshwater Lake Marine Seawater Seawater Marine Plankton Marine Marine Surface Seawater Marine Seawater Marine Seawater |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
ACM5_1073073 | 3300001820 | Marine Plankton | MASEIRANKQTNRAGLGTVTYTDTGIIVSGIVTANSFKGDGSLLTGIDATALKD |
JGI26062J44793_10384561 | 3300002955 | Marine | MTSEIRVNKINNRAGLGTVEYTPTGIIVSGIVTAYEFDGNFDTTPGIVV |
Ga0066856_103306632 | 3300005404 | Marine | MASQLRVNKSENRSGLGTITYTDTGAIVSGIVTANSFSGDIIGNITG |
Ga0066861_101022761 | 3300005522 | Marine | MTSEIRVNKINNRAGLGTITIADTGVVVNGIVTCT |
Ga0066835_103223431 | 3300005606 | Marine | MASEIRVNKIANRAGLSTVQYTDTGIIVSGIVTCTE |
Ga0066840_100442372 | 3300005608 | Marine | MASEIRANKQTNRAGLGTVTYTDTGIIVSGIVTANSFE |
Ga0079957_11687541 | 3300005805 | Lake | MASEVRVNQIQNRSGLGTITVADGGITVSGVVTATSVTSSGAVTAG |
Ga0066370_100019053 | 3300005971 | Marine | MASEIRVNKINNRAGLGTVTYTDTGIIVSGISTATNFKTGSSNLHS |
Ga0066370_101390571 | 3300005971 | Marine | MASEIRVNQIQNRSGLTTTTLNDQGVVVAGIVTANSFSGD |
Ga0066371_101688492 | 3300006024 | Marine | MASQLRVNKSENRSGLGTITYTDSGPIVSGIVTANSFSGDIIG |
Ga0066836_103893603 | 3300006166 | Marine | MASQLRVDKSENRSGLGTITYTDTGAIVSGIVTANSFEGDLIGTATGLNA |
Ga0099675_15274362 | 3300006334 | Marine | MASEIRVNKINNRVGLGTVTYTDTGIIVSGISTATNFKTGSSNLHST |
Ga0099693_10432302 | 3300006345 | Marine | MASEIRVNKIENRSGLGTVTFADTGVDLAGIVTE* |
Ga0099693_10440541 | 3300006345 | Marine | MASEIRANKQTNRAGLGTVTYTDTGIVVSGIVTATQFEG |
Ga0099954_10481671 | 3300006350 | Marine | MTSEIRANTIKNRVGLGTVSYTNTGIVVSGIVTANSFSG |
Ga0099953_10718591 | 3300006351 | Marine | MASEIRANKQTNRAGLGTVTYTDTGIIVSGIVTANSFKGDG |
Ga0099963_10025312 | 3300006413 | Marine | MASEIRVNKINNRVGLGTVTYTDTGIIVSGISTATNFKTGSSN |
Ga0100229_10407551 | 3300006481 | Marine | MASEIRVNKINNRAGLGTVTYTDTGIIVSGIVTANSFKGDGSSLTGI |
Ga0098042_10745631 | 3300006749 | Marine | MTSEIRVNSLTNRSGLSTVSITDTGVVVAGILTANTG |
Ga0115013_100803261 | 3300009550 | Marine | MTSEIRVNKIENRSGLGTVTFADTGVDLAGIVTAT |
Ga0115012_105879253 | 3300009790 | Marine | MASEIRVNKINNRAGLGTITIADTGVVVNGIVTCTEVSGL |
Ga0115012_121130392 | 3300009790 | Marine | MTSEIRVNSITNRSGLSTVTWNDEGLDVVGVVTATSFIG |
Ga0098043_10918732 | 3300010148 | Marine | MTSEIRVNKIINRSGLSTVTFTDDGAIVSGIVTANSFSGNVTGNITGN |
Ga0098043_11033271 | 3300010148 | Marine | VASEIRVNKIINRSGLSTVTFTDDGAIVSGIVTANSFSGNVTGN |
Ga0137784_14433382 | 3300010936 | Marine | MASEIRVNKINNRAGLGTVSYTDTGIFVSGFSTATNFKTGSSNLHSRGL* |
Ga0163110_100118411 | 3300012928 | Surface Seawater | MASEIRANKQTNRVGLGTVTYTDTGIIVSGIVTANSFKGDGSQLTGVTSVGGATGVDFNDNVKI |
Ga0163110_101055071 | 3300012928 | Surface Seawater | MASEIRVNKINNRAGLGTVTYTDTGIIVSGIVTANSFEGD |
Ga0163110_107406392 | 3300012928 | Surface Seawater | MASEIRANKQTNRVGLGTVTYTDTGIIVSGIVTANSFKGD |
Ga0163110_110854123 | 3300012928 | Surface Seawater | MASEIRANKQTNRVGLGTVTYTDTGIIVSGIVTANSFK |
Ga0163110_112831782 | 3300012928 | Surface Seawater | MSSEIRANKQTNRAGLGTVTYTDTGIIVSGIVTANSFKGDGSQL |
Ga0163110_117252122 | 3300012928 | Surface Seawater | MTSEIRTNVLKNRVGLGTVSLTNTGIIVSGIVTATSF |
Ga0163109_1000343913 | 3300012936 | Surface Seawater | MASEIRANKQTNRVGLGTVTYTDTGIIVSGIVTANSFKGDGS |
Ga0163109_101087913 | 3300012936 | Surface Seawater | MSSEIRVNKINNRAGLGTVTYTDTGIIVSGISTASNFKT |
Ga0163109_109209722 | 3300012936 | Surface Seawater | MASEIRVNKIINRSGLSTVTFTDTGAIVSGIVTANSFSGNVTGNVTG |
Ga0163109_110865303 | 3300012936 | Surface Seawater | MSSEIRVNKINNRAGLGTVTYTDTGIIVSGISTASN |
Ga0163179_103460473 | 3300012953 | Seawater | MSSEIRVNKINNRAGLGTVEYTPTGIIVSGIVTAYEFDG |
Ga0163111_110947371 | 3300012954 | Surface Seawater | MTSEIRANTIKNRVGLGTISFTNTGAIVSGIVTANTFRL |
Ga0181369_10293334 | 3300017708 | Marine | MSSEIRVNSLTNRSGLSTVTIADTGAVVAGMITATTFSGPLTGAVTG |
Ga0181412_10162132 | 3300017714 | Seawater | MSSEIRVNSLTNRSGLSTVTIADTGAVVAGMITATTFSGPLT |
Ga0181412_10462581 | 3300017714 | Seawater | MASEIRVNSLTNRSGLSTVTIADTGAVVAGMITATTFSGPLT |
Ga0181383_10165891 | 3300017720 | Seawater | MASEIRVNKIINRSGLSTVTFSDTGAIVSGIVSATVYT |
Ga0181428_10086715 | 3300017738 | Seawater | MASEIRVNKIINRSGLSTVTFTDDGAIVSGIVSASVYTGSGANLTDLPAGNLTGNLPAIS |
Ga0181433_10500232 | 3300017739 | Seawater | MASEIRANKQTNRVGLGTVTYTDTGIIVSGIVTANSFKGDGSSLTGITTVGGARG |
Ga0181407_10722322 | 3300017753 | Seawater | MASEIRVNKIINRSGLSTVTFSDTGAIVSGIVTANSFSGNVTGAVTGSG |
Ga0181382_10675251 | 3300017756 | Seawater | MASEIRVNKIINRSGLSTVTFSDTGAIVSGIVTANSFSGNVTGAVTGSGAN |
Ga0181382_11093492 | 3300017756 | Seawater | MASEIRVNKINNRVGLGTVTYTDTGIIVSGISTATNFKTGSSNLH |
Ga0181414_10288621 | 3300017759 | Seawater | MASEIRVNKITNRSGLTTTTFVDTGVDVVGLVTASGYNVGTG |
Ga0181414_10805511 | 3300017759 | Seawater | MASEIRVNKIINRSGLSTVTFSDTGAIVSGIVTANNFSGNVTGNVTGAVTGSGANLT |
Ga0181414_10849883 | 3300017759 | Seawater | MASEIRANKQTNRAGLGTVTYTDTGIVVSGIVTATQF |
Ga0181385_10175221 | 3300017764 | Seawater | MASEIRVNKIINRSGLSTVTFSDTGAIVSGIVTANSF |
Ga0181406_11414402 | 3300017767 | Seawater | MASEIRANKQTNRVGLGTVTYTDTGIIVSGIVTANSISGGSSVTATTFYGSGSSLTDIDATALKDVAVIIPAFPK |
Ga0187220_12060522 | 3300017768 | Seawater | MASEIRANKQTNRVGLGTVTYTDTGIIVSGIVTANSFKGDGSSLTGITT |
Ga0181425_12882712 | 3300017771 | Seawater | MASEIRVNKINNRAGLGTVTYTDTGIIVSGVSTASNFKTGTSDLH |
Ga0181386_10906123 | 3300017773 | Seawater | MASEIRVNKIINRSGLSTVTFSDTGAIVSGIVTANSFSGNVTGNV |
Ga0181394_11567921 | 3300017776 | Seawater | MASEIRVNKIINRSGLSTVTFSDTGAIVSGIVTAN |
Ga0181424_104525591 | 3300017786 | Seawater | MASEIRVNKIINRSGLSTVTFSDTGAIVSGIVTANSFSGNVTGNVTGN |
Ga0211484_10056801 | 3300020269 | Marine | MASEIRANKQTNRAGLGTVTYTDTGIIVSGIVTANSFKGDGSQLTGVTSVGGTTGV |
Ga0211484_10134181 | 3300020269 | Marine | MASEIRANKQTNRVGLGTVTYTDTGIIVSGIVTANSFKGDGSQLTGVTSVGGTTGV |
Ga0211619_10055901 | 3300020288 | Marine | MASEIRVNKINNRAGLGTVTYTDTGIIVSGISTATNF |
Ga0211474_10038475 | 3300020296 | Marine | MSSEIRVNKINNRAGLGTVEYTPTGIIVSGIVTAYEFDGNFDTTPGIV |
Ga0211542_10638231 | 3300020312 | Marine | MASEIRVNKITHTAGVGTITTSADGIVVSGIVTANNFSGNLTGTVTGSGANL |
Ga0211542_10685641 | 3300020312 | Marine | MASEIRVNKIQNRSGLSTVTFSDTGAIVSGIVTANNFSGNVTG |
Ga0211517_10027975 | 3300020319 | Marine | MSSEIRVNKINNRAGLGTVEYTPTGIIVSGIVTAYEFDGNFDTTP |
Ga0211517_10726701 | 3300020319 | Marine | MTSEIRANKQTNRAGLGTVTYTDTGIIVSGIVTANSFKGDGSSLTGIDATAL |
Ga0211600_10540671 | 3300020348 | Marine | MASELRVNKLTNRSGLGTVTYTDTGAIVSGVATASNFKTGTTNV |
Ga0211647_101309212 | 3300020377 | Marine | MTSEIRTNTIKNRVGLGTISLTSTGPIVSGIVTANSFSGP |
Ga0211498_100190412 | 3300020380 | Marine | MASEIRANKQTNRVGLGTVTYTDTGIIVSGIVTANSFKT |
Ga0211498_100251881 | 3300020380 | Marine | MASEIRANKQTNRVGLGTVTYTDTGIIVSGIVTANSFKGDGSSLTGITTVGGARGVDFND |
Ga0211498_100390353 | 3300020380 | Marine | MTSEIRANTIKNRVGLGTVSYTNTGIVVSGIVTANSFSGP |
Ga0211498_100813261 | 3300020380 | Marine | MTSEIRVNKIANRAGLSTVEYTDTGIIVSGIVTCTEISGL |
Ga0211498_101574744 | 3300020380 | Marine | MTSEIRVNKIINRAGLGTVTYTDTGMVISGVSSASNFKTGSSNLHSTGLT |
Ga0211666_100163591 | 3300020392 | Marine | MASEIRANKQTNRVGLGTVTYTDTGIIVSGIVTANSFKGDGSSLTGID |
Ga0211497_100916582 | 3300020394 | Marine | MASEIRANKQTNRVGLGTVTYTDTGIIVSGIVTANS |
Ga0211705_100432811 | 3300020395 | Marine | MASQLRVNKSENRSGLGTITYTDTGAIVSGIVTANSFSGDIIGDITGA |
Ga0211705_102133731 | 3300020395 | Marine | MASEIRVNKINNRAGLGTVTYTDTGIIVSGIVTANSFK |
Ga0211583_101672671 | 3300020397 | Marine | MASEIRANKQTNRAGLGTVTYTDTGIVVSGIVTANSFKGDGSSL |
Ga0211583_103656961 | 3300020397 | Marine | MASEIRVNKIINRSGLSTVTFTNDGAIVSGIVSATVYTGSGANLTDLPAGNLSG |
Ga0211636_100420191 | 3300020400 | Marine | MTSEIRANTLKNRVGLGTVSFTNTGAIVSGIVTANS |
Ga0211617_101552841 | 3300020401 | Marine | MASEIRANKQTNRVGLGTVTYTDTGIIVSGIVTANSFEGDGSSL |
Ga0211499_100565991 | 3300020402 | Marine | MASEIRANKQTNRAGLGTVTYTDTGIIVSGIVTAN |
Ga0211496_102523942 | 3300020405 | Marine | MTSEIRVNKIANRAGLSTVQYTDTGIIVSGIVTCTEI |
Ga0211651_103558612 | 3300020408 | Marine | MASEIRANKQTNRAGLGTVTYTDTGIIVSGIVTANSFEGDGSSLTGID |
Ga0211472_100656631 | 3300020409 | Marine | MASEIRVNKINNRAGLGTVTYTDTGIIVSGISTATNFKT |
Ga0211587_100153167 | 3300020411 | Marine | MASEIRVNKIINRSGLSTVTFSDTGAIVSGIVTANSFSG |
Ga0211587_100664452 | 3300020411 | Marine | MASEIRANRQTNRVGLGTVTYTDTGIIVSGIVTANSFEGDGSSLT |
Ga0211587_100704421 | 3300020411 | Marine | MASEIRVNKIQNRSGLSTVTFSDTGAIVSGIVTANSF |
Ga0211516_100201405 | 3300020413 | Marine | MSSEIRVNKINNRAGLGTVEYTPTGIIVSGIVTAYEFDGN |
Ga0211516_100842742 | 3300020413 | Marine | MASEIRVNKINNRAGLGTVEYTPTGIIVSGIVTAYEFDGN |
Ga0211644_100022701 | 3300020416 | Marine | MASEIRANKQTNRVGLGTVTYTDTGIIVSGIVTANSFKGDGSQLTGITIPGGNNGLDLNDNIKIRLGTGNDLEIY |
Ga0211512_102244492 | 3300020419 | Marine | MASEIRVNKIINRSGLSTVTFSDTGAIVSGIVTANSFSGNVTGSASIVNIV |
Ga0211580_100574022 | 3300020420 | Marine | MASEIRVNKINNRAGLGTVEYTPTGIIVSGIVTAYEFDGNFDTTPG |
Ga0211653_100967311 | 3300020421 | Marine | MSSEIRVNKINNRAGLGTVTYTDTGIIVSGISTASNF |
Ga0211702_102663571 | 3300020422 | Marine | MASEIRANKQTNRVGLGTVTYTDTGIIVSGIVTAN |
Ga0211620_101047882 | 3300020424 | Marine | MASEIRANKQTNRAGLGTVTYTDTGIIVSGIVTANSF |
Ga0211581_101882404 | 3300020429 | Marine | MASEIRANKQTNRVGLGTVTYTDTGIIVSGIVTANSFR |
Ga0211622_101398591 | 3300020430 | Marine | MTSEIRTNIIKNRVGLGTISLTNTGLVVSGIITATNFVGSLP |
Ga0211565_101010861 | 3300020433 | Marine | MASEIRANRQTNRVGLGTVTYTDTGIVVSGIVTAQGLSG |
Ga0211565_101738051 | 3300020433 | Marine | MASEIRANKSTNRAGLGTVTYTDTGIVVSGVVTANNFSGPFTNFNVTGV |
Ga0211708_100018471 | 3300020436 | Marine | MASEIRVNKINNRAGLGTVTYTDTGIIVSGIVTANSFKGDGSSL |
Ga0211708_100326611 | 3300020436 | Marine | MASEIRVNKQTNRVGLGTVTYTDTGIIVSGIVTANSFKGDGSSLTGID |
Ga0211708_102948151 | 3300020436 | Marine | MASEIRVNQIQNRSGLTTTTLNDQGVVVTGIVTANSFSGDISGSSTYADF |
Ga0211708_103556401 | 3300020436 | Marine | MASEIRANKQTNRVGLGTVTYTDTGIIVSGIVTANSFKGDGSSLTGITTVGGARGVNF |
Ga0211539_103474291 | 3300020437 | Marine | MASEIRANKQTNRVGLGTVTYTDTGIIVSGIVTANSFKG |
Ga0211695_103474231 | 3300020441 | Marine | MTSEIRVNKINNRAGLGTVEYTPTGIIVSGIVTAYEFDGNFDTTP |
Ga0211559_105713891 | 3300020442 | Marine | MASEIRVNKQTNRVGLGTVTYTDTGIIVSGIVTANSF |
Ga0211574_100633891 | 3300020446 | Marine | MTSEIRTNNIKSRTGLSTVSYADTGIIVSGIVTATSFSGDGSNLTGISAGVS |
Ga0211574_101821592 | 3300020446 | Marine | MASEIRVNKIINRSGLSTVTFTDDGAIVSGIVSATVYTGSGANLTNLPAGNLSGT |
Ga0211574_103440221 | 3300020446 | Marine | MASEIRANKQTNRVGLGTVTYTDTGIIVSGIVTANSFEGDGSSLTGI |
Ga0211473_100078916 | 3300020451 | Marine | MTSEIRANKQTNRVGLGTVTYTDTGIIVSGIVTANSLGGIGHIDV |
Ga0211473_102481023 | 3300020451 | Marine | MASEIRVNKIANRAGLSTVEYTDTGIIVSGIVTCTEISGL |
Ga0211473_103404601 | 3300020451 | Marine | MASEIRVNKIANRAGLSTVEYTDTGIIVSGIVTCTEISG |
Ga0211548_102324762 | 3300020454 | Marine | MTSEIRANKLKNRVGLGTVEYTNTGIVVSGISTATNFKTGST |
Ga0211643_103330011 | 3300020457 | Marine | MASEIRVNKIINRSGLSTVTFTDDGAIVSGIVSATVYTGSGANLTD |
Ga0211676_100553604 | 3300020463 | Marine | MTSEIRVNKLTNRVGLGTVEYTNTGIVVSGISTSDNFKTGTSNL |
Ga0211676_102412893 | 3300020463 | Marine | MTSEIRVNKLTNRVGLGTVEYTNTGIVVSGISTSDNFKTGTSNLHST |
Ga0211676_105384392 | 3300020463 | Marine | MASEIRVNKIINRSGLSTVTFSDTGAIVSGIVTANSFSGNVTGSGANL |
Ga0211713_101094981 | 3300020467 | Marine | MASEIRANKQTNRVGLGTVTYTDTGIIVSGIVTANSLGGIGHIDV |
Ga0211475_100452614 | 3300020468 | Marine | MASEIRVNKINNRAGLGTVEYTPTGIIVSGIVTAYE |
Ga0211475_102611332 | 3300020468 | Marine | MASEIRVNQIQNRSGLSTVTFSDTGAIVSGIVTANSFSGNVTGNVT |
Ga0211577_101679991 | 3300020469 | Marine | MASEIRVNKIINRSGLSTVTFSDTGAIVSGIVTANSFSGNVTGAVTGSGANLTS |
Ga0208159_10612102 | 3300025101 | Marine | MASEIRVNKIINRSGLSTVTFSDTGAIVSGIVTANSFSGN |
Ga0209348_11097471 | 3300025127 | Marine | MASEIRVNKIENRSGLGTVTFADTGVDLAGIVTATT |
Ga0209348_12071052 | 3300025127 | Marine | MASEIRVNKIENRSGLGTVTFADTGVDLAGIVTAT |
Ga0208624_11075651 | 3300026093 | Marine | MASEIRANKQTNRAGLGTVTYTDTGIIVSGIVTANSFKGDGSSLTGIDATA |
Ga0209359_103063431 | 3300027830 | Marine | MASEIRVNKIENRSGLGTVTFADTGVDLAGIVTATTFSG |
Ga0257114_10719361 | 3300028196 | Marine | MASEIRVNSLTNRSGLSTVTIADTGAVVAGMITATTFSGPLTGAVTGNVTGNLTGN |
Ga0183757_10033011 | 3300029787 | Marine | MSSEIRVNKINNRAGLGTVEYTPTGIIVSGIVTAYEF |
Ga0183757_10557101 | 3300029787 | Marine | MASEIRVNKITNRSGLSTVTFSDTGAIVSGIVTANSFSGNV |
Ga0183826_10035012 | 3300029792 | Marine | MASEIRVNKINNRAGLGTVTYTDTGIIVSGISTATNFKTG |
Ga0310343_101066772 | 3300031785 | Seawater | MASEIRANKSTNRAGLGTVTYTDTGIIVSGIVTANSFKGDGSSLTGITTVGGARGVNFNDNVN |
Ga0310343_101779811 | 3300031785 | Seawater | MASEIRVNKINNRAGLGTVSYTDTGIIVSGISTATNFKTGS |
Ga0315320_101370931 | 3300031851 | Seawater | MASEIRVNSLTNRSGLSTVTIADTGAVVAGMITATTFSGPLTGAVTGNVT |
Ga0310342_1035092151 | 3300032820 | Seawater | MASEIRVNKIANRAGLSTVQYTDTGIIVSGIVTATELS |
Ga0334980_0415439_3_113 | 3300033816 | Freshwater | MASEIRVNSINNRSGLGTVTIADSGLVVSGIVTCTNV |
Ga0335029_0437382_2_157 | 3300034102 | Freshwater | MASEIRVNSINNRSGLGTVTIADSGLVVSGILTATTFAGNVTGNVTGNVVGN |
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