Metagenome / Metatranscriptome Family F058424

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F058424
Family Type	Metagenome / Metatranscriptome
Number of Sequences	135
Average Sequence Length	44 residues
Representative Sequence	PNLRLSEGLIDLMKDFSLSSAQGIGGAWLRPSTPFDERYGQW
Number of Associated Samples	98
Number of Associated Scaffolds	135

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.75 %
% of genes near scaffold ends (potentially truncated)	97.04 %
% of genes from short scaffolds (< 2000 bps)	94.81 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (73.333 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (33.333 % of family members)
Environment Ontology (ENVO)	Unclassified (48.889 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.407 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 41.43% β-sheet: 0.00% Coil/Unstructured: 58.57%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 135 Family Scaffolds
PF03401	TctC	11.11
PF04392	ABC_sub_bind	5.19
PF13924	Lipocalin_5	3.70
PF04226	Transgly_assoc	2.22
PF01042	Ribonuc_L-PSP	1.48
PF00528	BPD_transp_1	1.48
PF14026	DUF4242	1.48
PF01663	Phosphodiest	1.48
PF09926	DUF2158	0.74
PF01855	POR_N	0.74
PF11684	DUF3280	0.74
PF03928	HbpS-like	0.74
PF13417	GST_N_3	0.74
PF02518	HATPase_c	0.74
PF13358	DDE_3	0.74
PF07995	GSDH	0.74
PF00248	Aldo_ket_red	0.74
PF07485	DUF1529	0.74
PF00027	cNMP_binding	0.74
PF13545	HTH_Crp_2	0.74
PF05598	DUF772	0.74

COG ID	Name	Functional Category	% Frequency in 135 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	11.11
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	5.19
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	2.22
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	1.48
COG0674	Pyruvate:ferredoxin oxidoreductase or related 2-oxoacid:ferredoxin oxidoreductase, alpha subunit	Energy production and conversion [C]	0.74
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	0.74
COG4231	TPP-dependent indolepyruvate ferredoxin oxidoreductase, alpha subunit	Energy production and conversion [C]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	73.33 %
Unclassified	root	N/A	26.67 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	73.33 %
Unclassified	root	N/A	26.67 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	73.33 %
Unclassified	root	N/A	26.67 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	54.81 %
Unclassified	root	N/A	26.67 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.74 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.74 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.74 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	49.63 %
Unclassified	root	N/A	26.67 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.74 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.74 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.74 %
Armatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.67 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	25.19 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12.59 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	0.74 %
unclassified Armatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes	0.74 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.74 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.67 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	24.44 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.44 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	2.96 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.74 %
Armatimonadetes bacterium 13_1_40CM_3_65_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_3_65_7	0.74 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.74 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	0.74 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.74 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.67 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	24.44 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.70 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	2.22 %
Candidatus Sulfobium	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Sulfobium	0.74 %
Rhizobiales bacterium GAS113	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS113	0.74 %
Caballeronia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia	0.74 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	0.74 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.74 %
Armatimonadetes bacterium 13_1_40CM_3_65_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_3_65_7	0.74 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.67 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	24.44 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	2.22 %
Candidatus Sulfobium mesophilum	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Sulfobium → Candidatus Sulfobium mesophilum	0.74 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.74 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.74 %
Caballeronia telluris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → Caballeronia telluris	0.74 %
Rhizobiales bacterium GAS113	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS113	0.74 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.74 %
Armatimonadetes bacterium 13_1_40CM_3_65_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_3_65_7	0.74 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.67 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	24.44 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2.22 %
Candidatus Sulfobium mesophilum	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Sulfobium → Candidatus Sulfobium mesophilum	0.74 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.74 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.74 %
Caballeronia telluris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → Caballeronia telluris	0.74 %
Rhizobiales bacterium GAS113	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS113	0.74 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.74 %
Armatimonadetes bacterium 13_1_40CM_3_65_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_3_65_7	0.74 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.74 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004633\|Ga0066395_10259119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	936	Open in IMG/M
3300004633\|Ga0066395_10265432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	926	Open in IMG/M
3300005332\|Ga0066388_101930517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1055	Open in IMG/M
3300005363\|Ga0008090_10173441	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	669	Open in IMG/M
3300005363\|Ga0008090_15873791	Not Available	1079	Open in IMG/M
3300005434\|Ga0070709_10969294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	675	Open in IMG/M
3300005437\|Ga0070710_10085179	All Organisms → cellular organisms → Bacteria	1853	Open in IMG/M
3300005598\|Ga0066706_10624466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	855	Open in IMG/M
3300005713\|Ga0066905_101094334	Not Available	707	Open in IMG/M
3300005764\|Ga0066903_102208768	Not Available	1061	Open in IMG/M
3300005764\|Ga0066903_102422243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1015	Open in IMG/M
3300005764\|Ga0066903_104057819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	785	Open in IMG/M
3300005764\|Ga0066903_104537343	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300005764\|Ga0066903_105933745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	640	Open in IMG/M
3300005764\|Ga0066903_106434660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	612	Open in IMG/M
3300005764\|Ga0066903_106651370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → Caballeronia telluris	601	Open in IMG/M
3300005764\|Ga0066903_107822583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	549	Open in IMG/M
3300005764\|Ga0066903_109092285	Not Available	502	Open in IMG/M
3300006172\|Ga0075018_10074079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1465	Open in IMG/M
3300006176\|Ga0070765_101355524	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300006603\|Ga0074064_10003758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	893	Open in IMG/M
3300006800\|Ga0066660_11181769	Not Available	601	Open in IMG/M
3300006844\|Ga0075428_101181905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	807	Open in IMG/M
3300006871\|Ga0075434_101165939	Not Available	783	Open in IMG/M
3300007788\|Ga0099795_10660633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	500	Open in IMG/M
3300009012\|Ga0066710_103412067	Not Available	603	Open in IMG/M
3300009038\|Ga0099829_11430097	Not Available	571	Open in IMG/M
3300009143\|Ga0099792_11095806	Not Available	536	Open in IMG/M
3300009162\|Ga0075423_10855270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	963	Open in IMG/M
3300009162\|Ga0075423_12783885	Not Available	536	Open in IMG/M
3300009792\|Ga0126374_10872398	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300010043\|Ga0126380_10516213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	921	Open in IMG/M
3300010043\|Ga0126380_10628478	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300010048\|Ga0126373_12912475	Not Available	534	Open in IMG/M
3300010321\|Ga0134067_10339011	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300010358\|Ga0126370_11766462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	597	Open in IMG/M
3300010360\|Ga0126372_10937779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	872	Open in IMG/M
3300010361\|Ga0126378_10082124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3125	Open in IMG/M
3300010361\|Ga0126378_12312836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	613	Open in IMG/M
3300010361\|Ga0126378_12484901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	592	Open in IMG/M
3300010366\|Ga0126379_11556999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	766	Open in IMG/M
3300010366\|Ga0126379_12838484	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300010376\|Ga0126381_101832953	All Organisms → cellular organisms → Bacteria	875	Open in IMG/M
3300010398\|Ga0126383_10107820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2506	Open in IMG/M
3300010398\|Ga0126383_10626869	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Sulfobium → Candidatus Sulfobium mesophilum	1149	Open in IMG/M
3300010398\|Ga0126383_12670527	All Organisms → cellular organisms → Bacteria → Proteobacteria	582	Open in IMG/M
3300010863\|Ga0124850_1081150	All Organisms → cellular organisms → Bacteria	964	Open in IMG/M
3300011269\|Ga0137392_10191779	All Organisms → cellular organisms → Bacteria	1668	Open in IMG/M
3300012096\|Ga0137389_10356961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1244	Open in IMG/M
3300012189\|Ga0137388_11527128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	605	Open in IMG/M
3300012200\|Ga0137382_10160757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1528	Open in IMG/M
3300012202\|Ga0137363_10552987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	969	Open in IMG/M
3300012207\|Ga0137381_10556532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1000	Open in IMG/M
3300012208\|Ga0137376_10928363	Not Available	747	Open in IMG/M
3300012208\|Ga0137376_11315275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	613	Open in IMG/M
3300012209\|Ga0137379_11058385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS113	717	Open in IMG/M
3300012355\|Ga0137369_10182849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1637	Open in IMG/M
3300012359\|Ga0137385_11017056	Not Available	683	Open in IMG/M
3300012582\|Ga0137358_10587021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	748	Open in IMG/M
3300012971\|Ga0126369_12509058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_3_65_7	601	Open in IMG/M
3300016341\|Ga0182035_11574395	Not Available	592	Open in IMG/M
3300016357\|Ga0182032_10173393	All Organisms → cellular organisms → Bacteria	1618	Open in IMG/M
3300016357\|Ga0182032_11541412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	577	Open in IMG/M
3300016371\|Ga0182034_10260221	Not Available	1373	Open in IMG/M
3300016371\|Ga0182034_11524602	Not Available	586	Open in IMG/M
3300016445\|Ga0182038_11742700	Not Available	562	Open in IMG/M
3300016445\|Ga0182038_12178978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	503	Open in IMG/M
3300020579\|Ga0210407_11078629	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300021361\|Ga0213872_10450730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	517	Open in IMG/M
3300021560\|Ga0126371_12947036	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300021560\|Ga0126371_13469974	Not Available	532	Open in IMG/M
3300025898\|Ga0207692_10169481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1264	Open in IMG/M
3300025916\|Ga0207663_10518891	Not Available	928	Open in IMG/M
3300025922\|Ga0207646_11052982	Not Available	717	Open in IMG/M
3300025929\|Ga0207664_11331675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	638	Open in IMG/M
3300027071\|Ga0209214_1001270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2218	Open in IMG/M
3300031543\|Ga0318516_10283281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	958	Open in IMG/M
3300031543\|Ga0318516_10836067	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300031564\|Ga0318573_10288447	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300031668\|Ga0318542_10030828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2307	Open in IMG/M
3300031668\|Ga0318542_10057134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1790	Open in IMG/M
3300031679\|Ga0318561_10118100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1407	Open in IMG/M
3300031680\|Ga0318574_10114299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1509	Open in IMG/M
3300031680\|Ga0318574_10532983	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300031681\|Ga0318572_10922905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	518	Open in IMG/M
3300031682\|Ga0318560_10823132	All Organisms → cellular organisms → Bacteria → Proteobacteria	501	Open in IMG/M
3300031719\|Ga0306917_10425577	All Organisms → cellular organisms → Bacteria	1038	Open in IMG/M
3300031719\|Ga0306917_10925997	All Organisms → cellular organisms → Bacteria → Proteobacteria	681	Open in IMG/M
3300031724\|Ga0318500_10685592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	522	Open in IMG/M
3300031744\|Ga0306918_10211362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1466	Open in IMG/M
3300031744\|Ga0306918_10559096	All Organisms → cellular organisms → Bacteria → Proteobacteria	896	Open in IMG/M
3300031744\|Ga0306918_10574594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	883	Open in IMG/M
3300031744\|Ga0306918_11194196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	587	Open in IMG/M
3300031747\|Ga0318502_10322171	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M
3300031747\|Ga0318502_10611846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	656	Open in IMG/M
3300031765\|Ga0318554_10483079	Not Available	701	Open in IMG/M
3300031771\|Ga0318546_11332703	Not Available	504	Open in IMG/M
3300031793\|Ga0318548_10374450	Not Available	699	Open in IMG/M
3300031794\|Ga0318503_10141119	Not Available	775	Open in IMG/M
3300031795\|Ga0318557_10607832	Not Available	502	Open in IMG/M
3300031821\|Ga0318567_10058648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2007	Open in IMG/M
3300031821\|Ga0318567_10134982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1357	Open in IMG/M
3300031835\|Ga0318517_10102253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1259	Open in IMG/M
3300031846\|Ga0318512_10095078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1394	Open in IMG/M
3300031859\|Ga0318527_10445765	Not Available	552	Open in IMG/M
3300031879\|Ga0306919_11491549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	509	Open in IMG/M
3300031880\|Ga0318544_10015745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2469	Open in IMG/M
3300031890\|Ga0306925_10462115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1355	Open in IMG/M
3300031890\|Ga0306925_11716339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	605	Open in IMG/M
3300031896\|Ga0318551_10468897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	720	Open in IMG/M
3300031910\|Ga0306923_10967142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	927	Open in IMG/M
3300031912\|Ga0306921_11606219	Not Available	706	Open in IMG/M
3300031941\|Ga0310912_11456830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	516	Open in IMG/M
3300031941\|Ga0310912_11470074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	513	Open in IMG/M
3300031942\|Ga0310916_11369671	Not Available	580	Open in IMG/M
3300031946\|Ga0310910_10758920	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300031981\|Ga0318531_10548798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	523	Open in IMG/M
3300032001\|Ga0306922_12360664	Not Available	509	Open in IMG/M
3300032010\|Ga0318569_10153960	All Organisms → cellular organisms → Bacteria	1059	Open in IMG/M
3300032025\|Ga0318507_10332459	Not Available	661	Open in IMG/M
3300032035\|Ga0310911_10368178	All Organisms → cellular organisms → Bacteria → Proteobacteria	830	Open in IMG/M
3300032052\|Ga0318506_10225299	Not Available	829	Open in IMG/M
3300032054\|Ga0318570_10112069	All Organisms → cellular organisms → Bacteria → Proteobacteria	1199	Open in IMG/M
3300032059\|Ga0318533_11092446	Not Available	584	Open in IMG/M
3300032060\|Ga0318505_10481076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	586	Open in IMG/M
3300032063\|Ga0318504_10182185	Not Available	976	Open in IMG/M
3300032090\|Ga0318518_10675324	Not Available	526	Open in IMG/M
3300032094\|Ga0318540_10548904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	557	Open in IMG/M
3300032261\|Ga0306920_103685511	Not Available	563	Open in IMG/M
3300032261\|Ga0306920_103819962	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300033289\|Ga0310914_11325353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	622	Open in IMG/M
3300033290\|Ga0318519_10105029	All Organisms → cellular organisms → Bacteria	1526	Open in IMG/M
3300033290\|Ga0318519_10122194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1427	Open in IMG/M
3300033290\|Ga0318519_11000309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	519	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.30%
Host-Associated	Host-Associated	3.70%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.56%
Plants	Host-Associated → Plants	3.70%
Aquatic	Environmental → Aquatic	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.56%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.70%
Sediment	Environmental → Aquatic → Sediment	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	79.26%
Loam	Environmental → Terrestrial → Soil → Loam	16.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	49.63%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.44%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.70%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.22%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	33.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.30%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.33%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.11%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	10.37%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.70%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.48%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.48%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.74%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006603	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021361	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2	Host-Associated	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027071	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066395_102591191	3300004633	Tropical Forest Soil	DGPPPNLRLSEGLIDLMKDFSLSSAQGIGGAWLRPSTPFDERYGQW*
Ga0066395_102654321	3300004633	Tropical Forest Soil	SDNLIDLMKDFSLSSAQGIGAAWGIPLRASTPFDERYGQW*
Ga0066388_1019305171	3300005332	Tropical Forest Soil	NLRLSEGLIDLMKDFSLSSAQGIGGAWLRPSTPFDERYGQW*
Ga0008090_101734411	3300005363	Tropical Rainforest Soil	EMARVKPVDRPPPNLRLSEGLIDLMKDFSLSGAQGIGGAWLRPSTPFDERYGQW*
Ga0008090_158737911	3300005363	Tropical Rainforest Soil	RPPPNLRLSEGLIDLMKDFSLSSAQGIGAAWGIPLRASTPFDERYGQW*
Ga0070709_109692941	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	PPNLRLSDDWIDLMSGFSLSSAQAIGGAWGTPLPPPTPFDERYGRW*
Ga0070710_100851792	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	LSDDVIDLMKAFSLSSAEGIGGAWGTPLRPPTPFDKRFGQ*
Ga0066706_106244663	3300005598	Soil	MSPDLRLSENLIDLMKDFSLSSAQGIGGAWRIPPRASTP
Ga0066905_1010943341	3300005713	Tropical Forest Soil	LSEGLIDLMKDFSLSSAKGIGGAWLRPSTPFDERYGQW*
Ga0066903_1022087681	3300005764	Tropical Forest Soil	DLMTAGFSLSSAQAIGGSWATPVRSPTPFDDRYGQW*
Ga0066903_1024222433	3300005764	Tropical Forest Soil	IDLMKDFRLSNVEAIGGAWAIPVRPSTPFDERYGQW*
Ga0066903_1040578191	3300005764	Tropical Forest Soil	LRLSDTLIDLMEDFSLSSAQGIGLAWRIPSRASTPFDERYGQW*
Ga0066903_1045373433	3300005764	Tropical Forest Soil	DLMKDFSLSSAQAIGRAWGTPLRSSTPFDERYGQW*
Ga0066903_1059337452	3300005764	Tropical Forest Soil	KPIDLMKDFRLSSDQAIGGAWGIPLRPSTPFDERYGQW*
Ga0066903_1064346603	3300005764	Tropical Forest Soil	DRLPPNLRLSDKSIDLMKDFRLSNVEAIGGAWAIPVRPSTPFDERYGQW*
Ga0066903_1066513702	3300005764	Tropical Forest Soil	LIDLMKDFSLSSAQGIGGAWLRPSTPFDERYGQW*
Ga0066903_1078225831	3300005764	Tropical Forest Soil	PNLRLSEGLIDLMKDFSLSSAQGIGGAWLRPSTPFDERYGQW*
Ga0066903_1090922852	3300005764	Tropical Forest Soil	RVKPVDRPPPNLRLSEGLIDLMKDFSLSSTQGIGGAWLRPSTPFDERYGQW*
Ga0075018_100740791	3300006172	Watersheds	VKPVDRTPPNIRLSDELVDLTKDFSLSSAQAIGGAWGIPLRPSTPFDERYGQW*
Ga0070765_1013555242	3300006176	Soil	IDLMKDFSLSSAQAIGGAWGIPLRPSTPFDERYGQW*
Ga0074064_100037581	3300006603	Soil	PNLRLSDNLIDLMEHFSLSSAQGIGRAWGIPLRASTPFDERYGQW*
Ga0066660_111817692	3300006800	Soil	PNLRLSDDRIDLMKDFSLSSGQAIGGAWGIPPRPSTPFDERYGQW*
Ga0075428_1011819051	3300006844	Populus Rhizosphere	KPVDQISPGHRLGDNLIDLMKDFSLSSAQGVGGAWRIPPRALTPFDARYGQW*
Ga0075434_1011659391	3300006871	Populus Rhizosphere	DRIDLMTASFSLSSAQAIGGAWGIPGGPLTPFDDRYGQW*
Ga0099795_106606331	3300007788	Vadose Zone Soil	LSDNLIDLMNDFSLSSAQGIGGAWGIPPRASTPFDARYGQW*
Ga0066710_1034120671	3300009012	Grasslands Soil	SDDLIDLMKDFSLSSAQAIGGAWGIPLRPSTPFDERYGQW
Ga0099829_114300971	3300009038	Vadose Zone Soil	PPNLRLSDNPIDLMEHFSLSSAQGIGRAWGIPLRASTPFDERYGQW*
Ga0099792_110958061	3300009143	Vadose Zone Soil	VDLMKHFSLSSAQGVGSAWGAPLRPPMPFDERYGQW*
Ga0075423_108552703	3300009162	Populus Rhizosphere	DLRLSDKPIDLMKDFRLSNAEAIGGAWAIPVRPSTPFDERYGQW*
Ga0075423_127838852	3300009162	Populus Rhizosphere	PPNLRLSDNLIDLMEHFSLSSAQGIGRAWGMPLRASTPFDERYGQW*
Ga0126374_108723982	3300009792	Tropical Forest Soil	DKPIDLMKDFRLSNAEAIGGAWAIPVRPSTPFDERYGQW*
Ga0126380_105162131	3300010043	Tropical Forest Soil	STPANLRLSDDRIDLMSGISLSSNQAIGGVWGIPVRPPTPFDERYGQW*
Ga0126380_106284781	3300010043	Tropical Forest Soil	VEGTPLNLRLSDNRIDLMSGISVSSNQAIGGGIPVRPPTPFDERYGQW*
Ga0126373_129124751	3300010048	Tropical Forest Soil	LARVKPVDKMPPNLRLGDDLIDLMKDFSLSSAQGIGAAWGIPLRASTPFDERYGQW*
Ga0134067_103390111	3300010321	Grasslands Soil	NLIDLMKDFSLSSAQGIGGAWRIPPRASTPFDARYGQW*
Ga0126370_117664622	3300010358	Tropical Forest Soil	PPPNLRLSEGLIDLMKDFSLSSAQGIGGAWLRPSTPFDERYGQW*
Ga0126372_109377792	3300010360	Tropical Forest Soil	LSDGLIDLMKGFSLSSAQGIGSAWLRPSTPFDERYGQW*
Ga0126378_100821247	3300010361	Tropical Forest Soil	DLMKDFRLSNVEAIGGAWAIPVRPSTPFDERYGQW*
Ga0126378_123128361	3300010361	Tropical Forest Soil	RIDLMSGFGLSSNQGIGGALGIPVRPPTPFDERYGQW*
Ga0126378_124849011	3300010361	Tropical Forest Soil	VKPVDRLPPNLRLSDKPIDLMKDFRLSSDQAIGGAWGIPLRPSTPFD*
Ga0126379_115569992	3300010366	Tropical Forest Soil	VKPVDRPPPNLRLSEGLIDLMKDFSLSSAQGIGGPWLRPSTPFDERYGQW*
Ga0126379_128384841	3300010366	Tropical Forest Soil	MPPNLRLSDTLIDLMEDFSLSSAQGIGRAWGIPLRASTPFDERYGEW
Ga0126381_1018329531	3300010376	Tropical Forest Soil	VKPVDRTPPNLRLSDDRIDLMSGFSLSSAQAVGGAWGIPLRPPTPFDERYGQW*
Ga0126383_101078201	3300010398	Tropical Forest Soil	NLRLSDKPIDLMKDFRLSNVEAIGGAWAIPVRPSTPFDERCG*
Ga0126383_106268691	3300010398	Tropical Forest Soil	IDLMEDFSLSSAQGIGLAWRIPSRASTPFDERYGQW*
Ga0126383_126705272	3300010398	Tropical Forest Soil	EGLIDLMKDFSLSSAQGIGGAWLRPSTPFDERYGQW*
Ga0124850_10811501	3300010863	Tropical Forest Soil	LQLSDDLIDLMKDFSLSSAQAIGRAWGPPRPSTTPFDERYGQW*
Ga0137392_101917793	3300011269	Vadose Zone Soil	SDDLIDLMKDFSLSSAQAIGGAWGIPLRPSTPFDERYGQW*
Ga0137389_103569614	3300012096	Vadose Zone Soil	DRAPPNLRLSNSLIDLMKGFSLSSSQGIGGAWETPPNIATPGSFAERYGRW*
Ga0137388_115271282	3300012189	Vadose Zone Soil	RLSDNLIDLMEHFSLSSAQGIGRAWGIPLRASTPFDERYGQW*
Ga0137382_101607572	3300012200	Vadose Zone Soil	DNLIDLMKDFSLSSAQGVGGALRIPPRASTPFDARYGQW*
Ga0137363_105529871	3300012202	Vadose Zone Soil	RVKPVESTPNLRLSDDRIDLMSGFSLSSKQAIGGAWGIPVRPPTPFDERYGQW*
Ga0137381_105565321	3300012207	Vadose Zone Soil	RLSDDRIDLMKDFSLSSGQAIGGAWGIPLRPSTPFDERYGQW*
Ga0137376_109283631	3300012208	Vadose Zone Soil	TPPNLRLSDDRIDLMTGGFSLSSAQAIGGAWEIPVRPPTPFDARYGQW*
Ga0137376_113152752	3300012208	Vadose Zone Soil	RLSDNLIDLMKDFSLSSAQGIGGAWRIPPRASTPFDARYGQW*
Ga0137379_110583851	3300012209	Vadose Zone Soil	NLRLSDKPIDLMKYFSLSSDQAIGGAWGIPLRPSTPFDERSGQW*
Ga0137369_101828491	3300012355	Vadose Zone Soil	SHDLIDLMQEFSLSSAHAIGGAWGIPVRPPTLFDERYGRW*
Ga0137385_110170562	3300012359	Vadose Zone Soil	RVKPVDRLPPNLRLSDKPIDLMKYFSLSSDQAIGGAWGIPLRPSTPFDERYGQW*
Ga0137358_105870213	3300012582	Vadose Zone Soil	PPDLRLSDKPIALMKDFRLSNAEAIGGAWAIPVRPSTPFDERYGQW*
Ga0126369_125090581	3300012971	Tropical Forest Soil	EMARVKPVDSPPPNLRLSEGLIDLMKDFSLSSAKGIGGAWLRPSTPFDERYGQW*
Ga0182035_115743951	3300016341	Soil	ARVKPVDTMPPNLRLSDNLIDLMEHFSLSSAQGIGRAWGIPLRASTPFDERYGQW
Ga0182032_101733932	3300016357	Soil	RVKPVDSPPPNLRLSEGLIDLMKDFSLSSTQGIGGAWLRPSTPFDERYGQW
Ga0182032_115414121	3300016357	Soil	KPVDRPPPNLRLSEGLIDLMKDFSLSSAQGIGGAWLRPSTPFDERYGQW
Ga0182034_102602211	3300016371	Soil	MFNMKPVDTMPPNLRLSEGLIDLMKDFSISSAEGIGGAWGVPPRPSTPFDERYGQW
Ga0182034_115246021	3300016371	Soil	PVNTVPPNLRLSDNLIDLMEHFSLSSAQGIGCAWGIPLRASTPFDERYGQW
Ga0182038_117427001	3300016445	Soil	PVDTMPPNLRLSDNLIDLMEDFSLSSAQGIGLAWRIPPRASTPFDERYGQW
Ga0182038_121789782	3300016445	Soil	LPPNLQLSDKPIDLMKDFRLSNVEAIGGAWAIPVRPSTPFDERYGQW
Ga0210407_110786291	3300020579	Soil	RNLRFSDDRIDLMSGFSLSSNRAIGGAWEIPMRPPTPFDERYGQW
Ga0213872_104507301	3300021361	Rhizosphere	VDRPPPNLRLSEGLIDLMKDFSLSSAQGIGGAWLRPSTPFDERYGQW
Ga0126371_129470362	3300021560	Tropical Forest Soil	VKPVDRPPPNLRLSEGLIDLMKDFSLSSAQGIGGPWLRPSTPFDERYGQW
Ga0126371_134699741	3300021560	Tropical Forest Soil	RVKPVDTMPPNLRLSDNLIDLMEDFSLSSAQGIGLAWRIPPRASTPFDERYGQW
Ga0207692_101694813	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	LIDLMKDFSLSSAQGVGGAWRIPPRALTPFDARYGQW
Ga0207663_105188911	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	PPNLRLSDDRIDLMTGGFSLSSAQAIGGAWEIPVRPPTPFDARYGQW
Ga0207646_110529822	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	LSDDRIDLMKDFSLSSGQAIGGAWGIPPRPSTPFDERYGQW
Ga0207664_113316752	3300025929	Agricultural Soil	RLSDNLIDLMKGFSLSSAQGIGGAWRIPPRASTPFDARYGQW
Ga0209214_10012701	3300027071	Forest Soil	RLSDKPIDLMKDFRLSNAEAIGGAWAIPVRPSTPFDERYGQW
Ga0318516_102832813	3300031543	Soil	RLSEGLIDLMKDFSLSSAKGIGGAWLRPSTPFDERYGQW
Ga0318516_108360671	3300031543	Soil	ARVKPVDRPPPNLRLSEGLIDLMKDFSLSSAQGIGGAWLRPSTPFDERYGQW
Ga0318573_102884471	3300031564	Soil	MPPNLRLSDNLIDLMKDFSLSSAQAIGGAWETPLPPPTPFDERYGRW
Ga0318542_100308284	3300031668	Soil	SKPVDRTPPNLRLSEDLIDLMKDFSLSSAQGIGGAWLRPSTPFDERYGQW
Ga0318542_100571341	3300031668	Soil	RVKPVDSPPPNLRLSEGLIDLMKDFSLSSAKGIGGAWLRPSTPFDERYGQW
Ga0318561_101181001	3300031679	Soil	NLRLSDNLIDLMEHFSLSSAQGIGRAWGIPLRASTPFDERYGQW
Ga0318574_101142991	3300031680	Soil	VKPVDSPPPNLRLSEGLIDLMKDFSLSSAKGIGGAWLRPSTPFDERYGQW
Ga0318574_105329831	3300031680	Soil	SEGLIDLMKDFSLSSAQGIGGAWLRPSTPFDERYGQW
Ga0318572_109229051	3300031681	Soil	PPPNLRLSEGLIDLMKDFSLSSAQGIGGAWLRPSTPFDERYGQW
Ga0318560_108231322	3300031682	Soil	PVDRPPPNLRLSEGLIDLMKDFSLSSAQGIGGAWLRPSTPFDERYGQW
Ga0306917_104255771	3300031719	Soil	PPNLRLSEGLIDLMKDFSLSSAQGIGGAWLRPSTPFDERYGQW
Ga0306917_109259972	3300031719	Soil	NLRLSEGLIDLMKDFSLSSAQGIGGAWLRPSTPFDERYGQW
Ga0318500_106855921	3300031724	Soil	FRLSDNLIDLMEDFSLSSAQGIGLAWRIPPRASTPFDERYGQW
Ga0306918_102113624	3300031744	Soil	EGLIDLMKDFSLSSAQGIGGAWLRPSTPFDERYGQW
Ga0306918_105590961	3300031744	Soil	IDLMKDFSLSSAQAIDGAWGTRLRPSTPFGERYGRW
Ga0306918_105745941	3300031744	Soil	VKPVDRPPPNLRLSEGLIDLMKDFSLSSAQGIGGAWLRPSTPFDERYGQW
Ga0306918_107956262	3300031744	Soil	ARVKPVDRPPPNLRLSEGLIDLMKDFSLSSAEGIGGAWLRPSTPFDERYGQW
Ga0306918_111941961	3300031744	Soil	VDKLPPNLRLSDKPIDLMKDFRLSNVEAIGGAWAIPVRPSTPFDERYGQW
Ga0318502_103221711	3300031747	Soil	LRLSEGLIDLMKDFSLSSAQGIGGAWLRPSTPFDERYGQW
Ga0318502_106118462	3300031747	Soil	LSEGLIDLMKDFSISSAEGIGGAWGIPPRPSTPFDERYGRW
Ga0318554_104830791	3300031765	Soil	DRTPPNLQLSDDLIDLMKDFSLSSAQAIGRAWGPLRPSTPFDERYGQW
Ga0318546_113327031	3300031771	Soil	IEMARVKPVDRPPPNLRLSEGLIDLMKDFSLSSTQGIGGAWLRPSTPFDERYGQW
Ga0318548_103744501	3300031793	Soil	DLIDLMKDFSLSSAQAIGRAWGPLRPSTPFDERYGQW
Ga0318503_101411191	3300031794	Soil	DTMPPNLRLSEGLIDLMKDFSISSAEGIGGAWGIPPRPSTPFDERYRRW
Ga0318557_106078321	3300031795	Soil	VKPVDTMPPNLRLSDNLIDLMEDFSLSSAQGIGLAWRIPPRASTPFDERYGQW
Ga0318567_100586484	3300031821	Soil	PVDRPPSNLRLSEGLIDLMKDFSLSSAQGIGGAWLRPSTPFDERYGQW
Ga0318567_101349821	3300031821	Soil	GLIDLMKDFSLSSAEGIGGAWLRPSTPFDERYGQW
Ga0318517_101022531	3300031835	Soil	NLRLSDDLIDLMKDFSLSSAQAIGGAWLRPSTPFDERYGQW
Ga0318512_100950781	3300031846	Soil	LIDLMRDFSLSSAQAIGGVWKTPLPPSTPFDERYGRW
Ga0318527_104457651	3300031859	Soil	DRPPPNLRLSEGLIDLMKDFSLSSTQGIGGAWLRPSTPFDERYGQW
Ga0306919_114915492	3300031879	Soil	SDDQIDLMSGFSLSSNQAIGGAWGIPVRPPTPFDERYGQW
Ga0318544_100157457	3300031880	Soil	GLIDLMKDFSLSSAKGIGGAWLRPSTPFDERYGQW
Ga0306925_104621151	3300031890	Soil	MPPNLRLSDNLIDLMEHFSLSSAQGIGRAWGIPLRASTPFDERYGQW
Ga0306925_117163391	3300031890	Soil	GLIDLMKDFSLSSAKGIGGAWLRPSTPFDERYAQW
Ga0318551_104688971	3300031896	Soil	PVDWMPPNLRLSDDLIDLMKDFSLSSAQAIGGAWLRPSTPFDERYGQW
Ga0306923_109671421	3300031910	Soil	PPNLRLSEDLIDLMKDFSLSSAQGIGGAWLRPSTPFDERYGQW
Ga0306921_116062191	3300031912	Soil	VDTMPPNLRLSDNLIDLMEDFSLSSAQGIGLAWRIPPGASTPFDERYGQW
Ga0310912_114568302	3300031941	Soil	PPNLQLSDKPIDLMKDFRLSNVEAIGGAWAIPVRPSTPFDERYGQW
Ga0310912_114700742	3300031941	Soil	DTMLPNLRLSDNLIDLMEDFSLSSAEGIGLAWRIPPRASTPFDERYGQW
Ga0310916_113696712	3300031942	Soil	PPNLRLSDNLIDLMEHFSLSSAQGIGRAWGIPLRASTPFDERYGQW
Ga0310910_107589201	3300031946	Soil	EVARVKPVDRPPPNLRLSEGLIDLMKDFSLSSAEGIGGAWLRPSTPFDERYGQW
Ga0318531_105487981	3300031981	Soil	DLIDLMKDFSLSSAQGIGGAWLRPSTPFDERYGQW
Ga0306922_123606641	3300032001	Soil	RPPPNLRLSEGLIDLMKDFSLSSAQGIGGAWVRPSTPFDERFGQW
Ga0318569_101539601	3300032010	Soil	PNLRLSDNLIDLMEHFSLSSAQGIGRAWGIPLRASTPFDERYGQW
Ga0318507_103324591	3300032025	Soil	LSEGLIDLMKDFSLSSAQGIGGAWLRPSTPFDERYGRW
Ga0310911_103681781	3300032035	Soil	LSEGRIDLMKDFSLSSAQGIGGAWLRPSTPFDERYGQW
Ga0318506_102252992	3300032052	Soil	DRMPPNLQLSDDLIDLMKDFSLSSAQAIGRAWGTPLRSSTPFDERYGQW
Ga0318570_101120693	3300032054	Soil	LIDLMKDFSLSSAQAIDGAWGTRLRPSTPFGERYGRW
Ga0318533_110924462	3300032059	Soil	KSMFNMKPVDTMPPNLRLSEGLIDLMKDFSISSAEGIGGAWGVPPRPSTPFDERYGQW
Ga0318505_104810762	3300032060	Soil	LRLSDDQIDLMSGFSLSSNQAIGGAWGIPVRPPTPFDERYGQW
Ga0318504_101821851	3300032063	Soil	ARVKPVDSPPPNLRLSEGLIDLMKDFSLSSAKGIGGAWLRPSTPFDERYGQW
Ga0318518_106753242	3300032090	Soil	VDTMPPNLRLSDNLIDLMEDFSLSSAQGIGLAWRIPPRASTPFDERYGQW
Ga0318540_105489042	3300032094	Soil	QIDLMSGFSLSSNQAIGGAWGIPVRPPTPFDERYGQW
Ga0306920_1036855112	3300032261	Soil	KPVDTMPPNLRLSDNLIDLMEDFSLSSAQGIGLAWRIPPRASTPFDERYGQW
Ga0306920_1038199621	3300032261	Soil	RTPPNLRLSDDRIDLMSGLSLSSAQAIGRAWGIPLRPPTPFEERYGQW
Ga0310914_113253532	3300033289	Soil	NLIDLMEDFSLSSAQGIGLAWRIPPRASTPFDERYGQW
Ga0318519_101050292	3300033290	Soil	RLSEGLIDLMKDFSLSSTQGIGGAWLRPSTPFDERYGQW
Ga0318519_101221941	3300033290	Soil	IDLMKDFSLSSAQAIGRAWGPLRPSTPFDERYGQW
Ga0318519_110003091	3300033290	Soil	DNLIDLMEDFSLSSAQGIGLAWRIPPRASTPFDERYGQW

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F058424

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences