Metagenome / Metatranscriptome Family F058408

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F058408
Family Type	Metagenome / Metatranscriptome
Number of Sequences	135
Average Sequence Length	82 residues
Representative Sequence	VFYRRSIAFFLFLAASVSLAAARDLALVSNKGNTFTTITLPDLVKVCKGQTNRWPDGKPVTFIMRAPSSAEMKLFLEK
Number of Associated Samples	119
Number of Associated Scaffolds	135

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	90.84 %
% of genes near scaffold ends (potentially truncated)	97.04 %
% of genes from short scaffolds (< 2000 bps)	85.19 %
Associated GOLD sequencing projects	110
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.296 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (11.111 % of family members)
Environment Ontology (ENVO)	Unclassified (25.926 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.852 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 36.79% β-sheet: 1.89% Coil/Unstructured: 61.32%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 135 Family Scaffolds
PF14534	DUF4440	9.63
PF13240	zinc_ribbon_2	6.67
PF02566	OsmC	3.70
PF12680	SnoaL_2	1.48
PF00155	Aminotran_1_2	1.48
PF00152	tRNA-synt_2	0.74
PF00665	rve	0.74

COG ID	Name	Functional Category	% Frequency in 135 Family Scaffolds
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	3.70
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	3.70
COG0017	Aspartyl/asparaginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.74
COG0173	Aspartyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.74
COG1190	Lysyl-tRNA synthetase, class II	Translation, ribosomal structure and biogenesis [J]	0.74
COG2269	Elongation factor P--beta-lysine ligase (EF-P beta-lysylation pathway)	Translation, ribosomal structure and biogenesis [J]	0.74
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.74
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.74
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.74
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.30 %
Unclassified	root	N/A	3.70 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.30 %
Unclassified	root	N/A	3.70 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.30 %
Unclassified	root	N/A	3.70 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	88.89 %
Unclassified	root	N/A	3.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.96 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	60.74 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7.41 %
Unclassified	root	N/A	3.70 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.48 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	60.74 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	7.41 %
Unclassified	root	N/A	3.70 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.48 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	60.74 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7.41 %
Unclassified	root	N/A	3.70 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	0.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	60.74 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	5.93 %
Unclassified	root	N/A	3.70 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.48 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	0.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	60.74 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	5.93 %
Unclassified	root	N/A	3.70 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.48 %
Geobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter	0.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	60.74 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	5.93 %
Unclassified	root	N/A	3.70 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.48 %
Geobacter sulfurreducens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter → Geobacter sulfurreducens	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10242786	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	585	Open in IMG/M
3300001593\|JGI12635J15846_10847079	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter → Geobacter sulfurreducens	523	Open in IMG/M
3300002245\|JGIcombinedJ26739_100465231	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1142	Open in IMG/M
3300003505\|JGIcombinedJ51221_10091029	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1206	Open in IMG/M
3300003505\|JGIcombinedJ51221_10199650	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	812	Open in IMG/M
3300004080\|Ga0062385_10331899	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	884	Open in IMG/M
3300004082\|Ga0062384_100101673	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1539	Open in IMG/M
3300004091\|Ga0062387_100291467	All Organisms → cellular organisms → Bacteria	1045	Open in IMG/M
3300004121\|Ga0058882_1167242	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300004633\|Ga0066395_10044678	All Organisms → cellular organisms → Bacteria → Proteobacteria	1930	Open in IMG/M
3300004633\|Ga0066395_10059051	All Organisms → cellular organisms → Bacteria → Acidobacteria	1727	Open in IMG/M
3300005435\|Ga0070714_100985655	All Organisms → cellular organisms → Bacteria → Acidobacteria	820	Open in IMG/M
3300005436\|Ga0070713_100909390	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	847	Open in IMG/M
3300005436\|Ga0070713_101280447	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	710	Open in IMG/M
3300005529\|Ga0070741_10165707	All Organisms → cellular organisms → Bacteria → Acidobacteria	2198	Open in IMG/M
3300005533\|Ga0070734_10046686	All Organisms → cellular organisms → Bacteria	2649	Open in IMG/M
3300005533\|Ga0070734_10135798	All Organisms → cellular organisms → Bacteria → Proteobacteria	1432	Open in IMG/M
3300005541\|Ga0070733_10968943	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571	Open in IMG/M
3300005591\|Ga0070761_10425622	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	812	Open in IMG/M
3300005602\|Ga0070762_10254716	All Organisms → cellular organisms → Bacteria	1092	Open in IMG/M
3300005602\|Ga0070762_10375161	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	912	Open in IMG/M
3300005610\|Ga0070763_10543443	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	669	Open in IMG/M
3300006052\|Ga0075029_100120048	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1595	Open in IMG/M
3300006162\|Ga0075030_101060879	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M
3300006173\|Ga0070716_100017015	All Organisms → cellular organisms → Bacteria → Acidobacteria	3763	Open in IMG/M
3300006174\|Ga0075014_100194574	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1018	Open in IMG/M
3300006174\|Ga0075014_100757081	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300006174\|Ga0075014_100795574	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300006175\|Ga0070712_100373028	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1173	Open in IMG/M
3300006176\|Ga0070765_101063224	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	765	Open in IMG/M
3300006640\|Ga0075527_10153096	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	652	Open in IMG/M
3300006804\|Ga0079221_10816050	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	671	Open in IMG/M
3300006804\|Ga0079221_11358099	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300006871\|Ga0075434_102061843	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	575	Open in IMG/M
3300006893\|Ga0073928_10102082	All Organisms → cellular organisms → Bacteria	2404	Open in IMG/M
3300006903\|Ga0075426_11125858	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300006914\|Ga0075436_101413802	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300007982\|Ga0102924_1206495	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	846	Open in IMG/M
3300009093\|Ga0105240_10227648	All Organisms → cellular organisms → Bacteria → Acidobacteria	2168	Open in IMG/M
3300009624\|Ga0116105_1029083	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1194	Open in IMG/M
3300009628\|Ga0116125_1226041	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300009698\|Ga0116216_10232997	All Organisms → cellular organisms → Bacteria → Acidobacteria	1126	Open in IMG/M
3300009698\|Ga0116216_10270725	All Organisms → cellular organisms → Bacteria → Acidobacteria	1036	Open in IMG/M
3300009824\|Ga0116219_10687349	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300010339\|Ga0074046_10693262	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M
3300010341\|Ga0074045_10588791	All Organisms → cellular organisms → Bacteria → Acidobacteria	710	Open in IMG/M
3300010358\|Ga0126370_10906771	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	796	Open in IMG/M
3300010398\|Ga0126383_12457846	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300012201\|Ga0137365_10443252	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	956	Open in IMG/M
3300012208\|Ga0137376_10137207	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2098	Open in IMG/M
3300012209\|Ga0137379_11076766	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	709	Open in IMG/M
3300012349\|Ga0137387_10905197	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M
3300012354\|Ga0137366_10470786	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	909	Open in IMG/M
3300012357\|Ga0137384_10205518	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1647	Open in IMG/M
3300012948\|Ga0126375_10288077	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1133	Open in IMG/M
3300014654\|Ga0181525_10889711	Not Available	505	Open in IMG/M
3300015371\|Ga0132258_13325268	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1106	Open in IMG/M
3300016387\|Ga0182040_10809620	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	772	Open in IMG/M
3300017822\|Ga0187802_10207487	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	754	Open in IMG/M
3300017823\|Ga0187818_10045042	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1894	Open in IMG/M
3300017924\|Ga0187820_1125304	All Organisms → cellular organisms → Bacteria → Acidobacteria	756	Open in IMG/M
3300017934\|Ga0187803_10229634	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	733	Open in IMG/M
3300017943\|Ga0187819_10049424	All Organisms → cellular organisms → Bacteria → Acidobacteria	2497	Open in IMG/M
3300017943\|Ga0187819_10552426	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300017948\|Ga0187847_10329287	All Organisms → cellular organisms → Bacteria → Acidobacteria	836	Open in IMG/M
3300017959\|Ga0187779_10394643	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	901	Open in IMG/M
3300017961\|Ga0187778_10431301	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	868	Open in IMG/M
3300017974\|Ga0187777_10060262	All Organisms → cellular organisms → Bacteria → Acidobacteria	2449	Open in IMG/M
3300017975\|Ga0187782_11677393	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300017995\|Ga0187816_10032577	All Organisms → cellular organisms → Bacteria → Acidobacteria	2120	Open in IMG/M
3300018006\|Ga0187804_10032592	All Organisms → cellular organisms → Bacteria → Acidobacteria	1967	Open in IMG/M
3300018006\|Ga0187804_10379352	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624	Open in IMG/M
3300018007\|Ga0187805_10020331	All Organisms → cellular organisms → Bacteria → Acidobacteria	2889	Open in IMG/M
3300018026\|Ga0187857_10215825	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	891	Open in IMG/M
3300018042\|Ga0187871_10375170	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	786	Open in IMG/M
3300018085\|Ga0187772_11318271	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300018086\|Ga0187769_10845722	All Organisms → cellular organisms → Bacteria → Acidobacteria	692	Open in IMG/M
3300018086\|Ga0187769_11371028	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300018090\|Ga0187770_11712910	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300018468\|Ga0066662_11166159	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	776	Open in IMG/M
3300020580\|Ga0210403_10971862	All Organisms → cellular organisms → Bacteria → Acidobacteria	666	Open in IMG/M
3300020583\|Ga0210401_11404890	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300021170\|Ga0210400_11235691	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300021180\|Ga0210396_11466408	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300021401\|Ga0210393_11014641	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	671	Open in IMG/M
3300021402\|Ga0210385_10254918	All Organisms → cellular organisms → Bacteria	1290	Open in IMG/M
3300021406\|Ga0210386_10523641	All Organisms → cellular organisms → Bacteria → Acidobacteria	1025	Open in IMG/M
3300021420\|Ga0210394_10522276	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1044	Open in IMG/M
3300021433\|Ga0210391_11481910	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300021474\|Ga0210390_11560389	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300021475\|Ga0210392_11278849	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300021479\|Ga0210410_11276467	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300021560\|Ga0126371_13028657	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300022557\|Ga0212123_10101341	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	2350	Open in IMG/M
3300022557\|Ga0212123_10489503	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300024271\|Ga0224564_1076162	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	671	Open in IMG/M
3300025928\|Ga0207700_10482904	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1095	Open in IMG/M
3300025929\|Ga0207664_10284959	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1450	Open in IMG/M
3300025939\|Ga0207665_10067567	All Organisms → cellular organisms → Bacteria → Acidobacteria	2434	Open in IMG/M
3300025939\|Ga0207665_11483756	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300026481\|Ga0257155_1032108	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	786	Open in IMG/M
3300026849\|Ga0207804_126277	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300027000\|Ga0207803_1025209	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	738	Open in IMG/M
3300027565\|Ga0209219_1010693	All Organisms → cellular organisms → Bacteria → Acidobacteria	2119	Open in IMG/M
3300027829\|Ga0209773_10196371	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	843	Open in IMG/M
3300027842\|Ga0209580_10091847	All Organisms → cellular organisms → Bacteria → Acidobacteria	1461	Open in IMG/M
3300027889\|Ga0209380_10123667	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1505	Open in IMG/M
3300028020\|Ga0265351_1005993	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	965	Open in IMG/M
3300028792\|Ga0307504_10353833	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	567	Open in IMG/M
3300028906\|Ga0308309_10927800	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	755	Open in IMG/M
3300030047\|Ga0302286_10573844	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300030580\|Ga0311355_10876189	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	817	Open in IMG/M
3300030706\|Ga0310039_10148245	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	950	Open in IMG/M
3300030814\|Ga0265741_109134	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	678	Open in IMG/M
3300031231\|Ga0170824_121541800	All Organisms → cellular organisms → Bacteria → Acidobacteria	2822	Open in IMG/M
3300031474\|Ga0170818_112740278	All Organisms → cellular organisms → Bacteria → Acidobacteria	2778	Open in IMG/M
3300031715\|Ga0307476_11050997	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	599	Open in IMG/M
3300031718\|Ga0307474_10969041	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	673	Open in IMG/M
3300031753\|Ga0307477_10120398	All Organisms → cellular organisms → Bacteria → Acidobacteria	1829	Open in IMG/M
3300031753\|Ga0307477_10854628	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	602	Open in IMG/M
3300031754\|Ga0307475_10416909	All Organisms → cellular organisms → Bacteria → Acidobacteria	1079	Open in IMG/M
3300031823\|Ga0307478_11681345	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300031833\|Ga0310917_10179918	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1408	Open in IMG/M
3300031945\|Ga0310913_11300168	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300031962\|Ga0307479_10851181	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	886	Open in IMG/M
3300032783\|Ga0335079_11567061	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	648	Open in IMG/M
3300032805\|Ga0335078_12099348	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300032892\|Ga0335081_10245822	All Organisms → cellular organisms → Bacteria → Acidobacteria	2421	Open in IMG/M
3300032897\|Ga0335071_11201969	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	703	Open in IMG/M
3300033158\|Ga0335077_10883770	All Organisms → cellular organisms → Bacteria → Acidobacteria	902	Open in IMG/M
3300033402\|Ga0326728_10284211	All Organisms → cellular organisms → Bacteria → Acidobacteria	1530	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.30%
Host-Associated	Host-Associated	3.70%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	74.81%
Aquatic	Environmental → Aquatic	21.48%
Plants	Host-Associated → Plants	3.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.59%
Freshwater	Environmental → Aquatic → Freshwater	14.81%
Sediment	Environmental → Aquatic → Sediment	3.70%
Peat	Environmental → Terrestrial → Peat	2.22%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.96%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.22%
Loam	Environmental → Terrestrial → Soil → Loam	19.26%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	14.81%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.11%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.70%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.22%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.74%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.52%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.59%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	11.11%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	7.41%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.67%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.70%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.22%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	2.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.96%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.48%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.48%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.74%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.11%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	7.41%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.93%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.19%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	5.19%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.19%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.19%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.19%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.44%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.70%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.70%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.70%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.22%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.22%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.96%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	2.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.96%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.48%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.48%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.48%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.74%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.74%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.74%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.74%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.74%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004121	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF109 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006640	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11B	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026481	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-A	Environmental	Open in IMG/M
3300026849	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 46 (SPAdes)	Environmental	Open in IMG/M
3300027000	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 41 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300028020	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE4	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030047	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E2_3	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300030814	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_102427861	3300000567	Peatlands Soil	VFHRRTLSVVLFLVASVTLAAARDLAIVSNKANSVSTITLPDLVKICKGQTGHWPDGKSVTFIMRNPSAPEMKILIEKVYELPDA
JGI12635J15846_108470791	3300001593	Forest Soil	VFYRRTLSICLFLAASVSLAAARDLALVSNKANAISAITMADLVKVCKGQTSRWPDGKAVTFIMRSPSSPEMR
JGIcombinedJ26739_1004652312	3300002245	Forest Soil	VLYRRTLSICLFLAASVSLAAARDLALVSNKANAISAITMADLVKVCKGQTSRWPDGKAVTFIMRSPSSPEMKLVLEK
JGIcombinedJ51221_100910293	3300003505	Forest Soil	VFHRRTLSVVLFLTASATLASARDLALVSNKVNSVSTITLPDLVKICKGQTGHWPDGKSVTFIMRNPSAP
JGIcombinedJ51221_101996501	3300003505	Forest Soil	LGILEAHDLGYVEPMTKFHENRPYGLSCLVGESVFYRKVISTSLFVAVTVSLAAARDLAVVSNKANSFAAISLPDLVKVCKAQTNRWPDGKPVMLIMRAPAT
Ga0062385_103318992	3300004080	Bog Forest Soil	VFYRRTLTVCLLLAASVSLATARDLALVSNKANTVSALTMPDLVKICKAQTNRWPDGKPVTFILRAPSAPEMKMFVEKIYELPQAQVKDLIASAN
Ga0062384_1001016733	3300004082	Bog Forest Soil	VFYRRAVVVSVFLLASVSLAAARDLAFVSNKSNTINALTLAELVKVCKGQTSHWPDGKSVTFIMRAP
Ga0062387_1002914671	3300004091	Bog Forest Soil	VAGEGKRLFYRRAIIVSLFLLASVSLAAARDLALVSNKANTISTLTLADVVKVCKGQTNRWPDGKPVTFIMRNTSAPETKILL
Ga0058882_11672421	3300004121	Forest Soil	MPGLIPPAGVGVHRRVVTIAFFICASVSLAAARDLAVVANKADSVPALAMPDLVKICKAQTNRWPDGKPVTFIMRAPGTPE
Ga0066395_100446782	3300004633	Tropical Forest Soil	VFHGRFLSLLLLFVAATVSAGSARDLAIVANKTNPVSTITLADFVKVAKGQTNRWPDGKSVTFIMRAPSAPEMR
Ga0066395_100590514	3300004633	Tropical Forest Soil	VVHRTLSLCLFLTASVSLATARDLALVSNKTNAITAITLPDLVKVCKAETNRWPDGKPVTFVMRSPSLPE
Ga0070714_1009856551	3300005435	Agricultural Soil	MTKFLENQPHAGFRLVGASVFYRRILSVLLFCALSVSLAAARDLALVSNKANSLATITLPELVKVCKAQTNRWPD
Ga0070713_1009093901	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VFHRRTLSLCLFLAASASLAAARDLALVSNKSNSVSTITLPDLVKVCKGQTNKWPDGKSVTFIMRNPSVPEMKFFLEKVYELPESQVKDLIA
Ga0070713_1012804471	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VRFRQSVTLCLLFAASIPLAAARDLAVVSNKSNSLSAITLPDLVKVCKGQNNHWPDGKSVTFIMRNPSVP
Ga0073909_104264431	3300005526	Surface Soil	MTKFHENRPHGLFCLVGASVFYRKIIGTSLFVIISLTLAAARDLAVVSNKANSLATISLPDLVKVCKAQTNRWPDGKPVTLIMRAPSTLEMKLFLEKVY
Ga0070741_101657074	3300005529	Surface Soil	VLDRKILIASLFVASAVTFAAARDLAVVSNKGNALGTLTVPDLVKISKGQTNHWPDGKSVTFIMRAPATPEMKVF
Ga0070734_100466865	3300005533	Surface Soil	VFYRRILITSMFLVAVVSLASARDLALVSNKANAISAMTVPDLVKVCKAQTNRWPDGKPVTLIIRTP
Ga0070734_101357981	3300005533	Surface Soil	VLYRRIVIVSLFVVSAVCAAAARDLALVSNKANTVSAITVPELVKVSKGQTVKWPDGKSITFIMRAPSTPEMRVF
Ga0070733_109689431	3300005541	Surface Soil	VFYRRVAFVSLFLAAGVSMAAARDLAVVSNKANAMTTVAQADLVKICKAQTTRWPDGRPVTFIMRAPATPEMRVLLEKVYELPEAQVREL
Ga0070761_104256221	3300005591	Soil	VFHRKILSILLFIAASASLASARDFALIANKTNSVSAITLPDLVKLCKGQTSHWPDGKQVTFIMRSPTAPEMKFFLEKVYELPEPQVMDIIAAANHG
Ga0070762_102547163	3300005602	Soil	VASEGKKLFYRRAMIAALFLLASVSLAAARDLAFVSNKANTINTLTLADLVKVCKGQTNRWPDGKPVTFIMRSTSAPETKILLEKIYEMPESGVREL
Ga0070762_103751612	3300005602	Soil	VFHRKILSILLFIAASASLASARDFALIANKTNSVSAITLPDLVKLCKGQTSHWPDGKQVTFIMRS
Ga0070763_105434432	3300005610	Soil	MTNFRENQIADFPLWGASVFYRRILIVSLFVASAASLAAARDLALVSNKANGVSAITVPDLVKVSKGQTNRWPDGKSVTFIMRAPATPEMKLLLEK
Ga0075029_1001200483	3300006052	Watersheds	LLVLSSVSLLAARDLAVVSNKTNGVSALALPELVKICKAQTNRWPDGKPLTFIMRAPSTPELKMLLEKVYELSSDQVQE
Ga0075030_1010608791	3300006162	Watersheds	MTNFHENRLYGLFCLVGASVFRKVINASLFIAVSVSLAAARDLAVVSNKANSLAAISLPDLVKVCKAQTNRWPDGKPVTLIMRAPATPEMKL
Ga0070716_1000170157	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VGASVFYRRILSVLLFCALSVSLAAARDLALVSNKANSLATITLPELVKVCKAQTNRWPDGKPVTLIMR
Ga0075014_1001945742	3300006174	Watersheds	VSFGRVTSVLLFLAASVSLAMARDLALVSNKANAVNALALPDLVKLCKAQTNRWPDGKPVTFIMRAPASAEMRMVLE
Ga0075014_1007570811	3300006174	Watersheds	VSFGRVTSIFLFFVACVSLAMARDLAVISNKANAVNALALPDLAKVCKAQTNRWPDGKPVTFIMRAPATPEMKIVLEKIYELPEARVKEVIA
Ga0075014_1007955742	3300006174	Watersheds	VLYHRTLSLCLFLAASVTLATARDLALVTNKTNALSAITLPDLVKVCKAQTNRWPDGKPVTFIMRAPSSPEMKMFLEKVYELPEGQVKELVNSANHGR
Ga0070712_1003730283	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VFDRRILGIFLFLAACVSPAAARDLAVVSNKANALSAITLPDLVKVCKAQTNRWPDGKPVTLIMRAPSAPEMRVFLEKVFELPE
Ga0070765_1010632241	3300006176	Soil	VLPRRVVMAGVFFAAAVSLAAGRDLAVVSNKANSVNAMTVPELLKVCKAQNNHWPDGKPITFIMRAPGTPEMK
Ga0075527_101530961	3300006640	Arctic Peat Soil	VLHRKALSLCLFLAASVSLAAARDLALVSNKANSLSAITLPDLVKVCKGQTNRWSDGKSVTFIMRNPSVPEMKFFLERVY
Ga0079221_108160502	3300006804	Agricultural Soil	VFYRRILATTLFIAAGVSVAAARDLAVVSNKANGLSAITVPDLIKVCKAQTNRWPDGKPVTLIMRAPSSPEMKVMLDKIFELPESQVI
Ga0079221_113580991	3300006804	Agricultural Soil	VYHRQILALSLFLAASVSVAAARDLALVSNKVNPVSTITLPDLVNVCKGQTSHWPDGKSVTFIMRAPSAPEMKV
Ga0075434_1020618432	3300006871	Populus Rhizosphere	VFFRQFIKIVLLVAASCSLAAARDLAVVSNKSNGLSTITLPDLVKVCKAQTNRWPDGKPVTIIMRAPGAPEMKVL
Ga0073928_101020824	3300006893	Iron-Sulfur Acid Spring	MIAALFLLASVSLAAARDLAFVSNKANTINTLTLADLVKVCKGQTNRWPDGKPIPFIMRSTSVPETKILLEKIYE
Ga0075426_111258582	3300006903	Populus Rhizosphere	VYHRRILALSLFLAASVSLAAARDLALVSNKTNPVSAITLPDLVKVCKGQTNHWPDGKSVTFIMRAPSAPEMKVLLEKIYELPEGQVK
Ga0075436_1014138021	3300006914	Populus Rhizosphere	MFSLFFATAGVSLAAARDLAVVSNKANSVSALALADLVKICKGQTNRWPDGKSVTFVMRSPANPAMK
Ga0102924_12064952	3300007982	Iron-Sulfur Acid Spring	LRLAGESVFYRQTLSVCLLVAVSVSLATARDLALVSNKVNSVSALSVPDLVKICKGQTNRWPDGKPVTFIMRSPSSPEMKLLLEKVYE
Ga0099829_117640951	3300009038	Vadose Zone Soil	VNVLVLVVASVSLAAARDLALVSNKTNTVNAVTLADLVKVCKAQTSKWPDGKPVTFVMRAPSTPEMKIFVEKVYAMPQKEVSELIAAANHGRSNHP
Ga0105240_102276485	3300009093	Corn Rhizosphere	VRISVPGAKVFYRKALMFWLFIATAGVSLATARDLAVVSNKANSVSALAVPDLVKICKGQTNRWPDGKSVTFIMRSPA
Ga0116105_10290831	3300009624	Peatland	VWPGEGKKLFYRRAMIVSLFLLASVSLAAARDLAFVSNKANTINVITVADLVKVCKGQTNRWPDGKPVTFIMRNTSAPETKILLEKVYE
Ga0116125_12260412	3300009628	Peatland	VASEGKKLFYRRAMIVSLFLLASVSLAAARDLAFVSNKANTISTLTVGDLVKVCKGQTNRWPDGKPVTFIMRNTSAPETKILLEK
Ga0116216_102329972	3300009698	Peatlands Soil	LLFLAASVSLAAARDLALISNKTNSVSAITLPDLVKVCKGQTNRWPDGKSVTFIMRNPSSAEMKLFLEKIYELPDAEVKDLIATANHGRMGH
Ga0116216_102707251	3300009698	Peatlands Soil	VFHRKSLSVVLFLAASVSLAAARDLALVSNKANSLSAITLPDLVKVCKGQTNRWPDGKSVTFIMRNPSSAEMKFFLEKVYELPEPQ
Ga0116219_106873491	3300009824	Peatlands Soil	MTSVSLAAARDLALISNKANSLSTITLPDFVKVCKGQTSRWPDGKPVTFVMRAPSTPEMKVLLEKVYELPEAQV
Ga0074046_106932622	3300010339	Bog Forest Soil	VSLILLVFVSLASARDLALVSNKTNGIAGTGMTLPDLVKICKAQTNHWPDGKPVTFIMRAPSTPEMKMMVEKVFEMPEAQVNEMIAAAN
Ga0074045_105887912	3300010341	Bog Forest Soil	MVSGFLAASISLAAARDLAVVSNKSNAVSAMALPDLVKICKAQTNHWPDGKPVTLIMRSPASPEMKVFLEKVYELPEDQVRDVIASA
Ga0126370_109067711	3300010358	Tropical Forest Soil	VFHRRTLTVCLFLAASVSLAAARDLALVSNKSNAVSTITLPDLVKVCKAQTNRWPDGKPVTFIMRSPSSPEMKLLLEKIYELPQNEVT
Ga0126383_106292943	3300010398	Tropical Forest Soil	MTKIHENRRVDFCVLREAGVFFRKIISASLFVAVSVSLAAARDLAVVSNKANSLAAISLPDLVKACKAQINRWPDGKPVTLLMRAPSTP
Ga0126383_124578461	3300010398	Tropical Forest Soil	VFYRRILATTLFIAAGVSVAAARDLAVVSNKANGLSAIAVPDLVKVCKAQTNRWPDGKPVTLIMRAPSSPEMKAMIEKIFELPEARVIDLIAAANHGRA
Ga0137365_104432523	3300012201	Vadose Zone Soil	VFYRRILGISLFLAASVSLSAARDLAVVSNKANALSAITLPDLVKVCKAQTNRWPDGKPVTLIMRAPSVPEMKLFLEKVFELPE
Ga0137376_101372074	3300012208	Vadose Zone Soil	MTKFHENRPYGLSCLVGESVFYRKVISTSLFVAVTVSLAAARDLAVVSNKANSVATISLPDLVKVCKAQTNRWPDGKPVMLIMRAPATPEMKLFLEKVY
Ga0137379_110767662	3300012209	Vadose Zone Soil	MAGASVIYRRILGICLFLVAIVSLAAARDLALVSNKSNSVSVITLPELIKVCKGQTSRWPDGKSITFIMRSPAAPEMKVLLEKIYAVPEP
Ga0137387_109051972	3300012349	Vadose Zone Soil	VFYRQTLTVCLFLAASVALAAARDFAVVSNKANSVSAITLPDLIKVCKGQNNRWPDGKSVTFIMRNPSTPEMKFFLE
Ga0137366_104707861	3300012354	Vadose Zone Soil	MTKFHEDHCVDNPSWGANLYRRGILTTIVLLGAGLSSASARDLAVVSNKANAISTITLPDLVKVCKAQTNHWPDGKPITFIMRAPSSPEMKVFLEKVYEL
Ga0137384_102055184	3300012357	Vadose Zone Soil	VFYRQTLTVCLFLAASVALAAARDFAVVSNKANSVSAITLPDLIKVCKGQNNRWPDGKSVTFIMRNPSTPEM
Ga0126375_102880773	3300012948	Tropical Forest Soil	MAKLLENHPHAGFRLVGASVFYRQILGTLLFCALSVSLASARDLALVSNKANSLATITLPELVKVCKAQTNRWPDG
Ga0181525_108897111	3300014654	Bog	MTNFHENDIADFLLWGASVFYRRILIVSLFVASAVSLAAARDLALVSNKANGVSAITVPDLVKVSKGQTSRWPDGKSVT
Ga0132258_133252683	3300015371	Arabidopsis Rhizosphere	VGASVFYRQILGTLIFCALSASLATARDLALVFNKANSLATITLAELVKVCKAQTNRWPDGKPVTLIMRAPSSPEMKLFL
Ga0182040_108096202	3300016387	Soil	VFFRKIIGASLFAAVSVSLAAARDLAVVSNKANSLAAISLPDLVKVCKAQTNRWPDGKPVTLIMRAPSAPEMKLFLEKVYEL
Ga0187802_102074871	3300017822	Freshwater Sediment	VRYLRILSVGLIFSVFVSLAAARELALVSNKTNSVSGMTLPELVKICKAQTNRWPDGKPVTFIMRAPSTPEMKIFVEKVFEMP
Ga0187818_100450423	3300017823	Freshwater Sediment	VFYRRIVITSLFLAATVALASARDLAVVSNKANAVSIITLPDFVKVCKAQTNRWPDGKPVTLIMRSPSTPEMKLFLEKVYELPEGQVRDLIATANH
Ga0187820_11253042	3300017924	Freshwater Sediment	VFYCRILTTCLLLGASVSLAAARDLAVVSNKSNAVSAITLPDLVKICKGQTNKWPDGKSVTFIMRAPSTPE
Ga0187803_102296342	3300017934	Freshwater Sediment	VLHRKALSLCLFLAASVSLAAARDLALVSNKTNSLSAIALPDLVKICKGHTSRWPDGKSVTFIMRNPGTPEMKFFLEK
Ga0187819_100494241	3300017943	Freshwater Sediment	VSYRRVLIFSLFFAVSVSLAAARDLAVVSNKANTFSTITLPDLVKVSKGQINRWPDGKPVTFVMRSPSIPEMKLLLEK
Ga0187819_105524261	3300017943	Freshwater Sediment	VSYGRVTSVLLFLAASVSLAMASDLAVVSNKANTVSALALPELVKVCKAQTNRWPDGKPVTFIMRAPASPEMRMVLEKVYELSEAQVKELIAS
Ga0187847_103292871	3300017948	Peatland	MTNFHENQMADLLLWGASVFYRRILIVSLFVSSAVSLAAARDLALVSNKANSVSAITLPDLVKVSKGQTNRWPDGKSVT
Ga0187779_103946431	3300017959	Tropical Peatland	VFHRRILPACLFLAASVSLAAARDLALVSNKTNSVTVITVPDLVKICKAQTNRWPDGKPVTFIMRAPATPEMKLLLEKVYELPEAQVKDLIVN
Ga0187778_104313011	3300017961	Tropical Peatland	VFHRRILPVCLFLAASAALASARDLALVSNKTNSVTVITVPDLVKICKAQTNRWPDGKPVTFIMRAPAT
Ga0187777_100602623	3300017974	Tropical Peatland	VFHRRILPACLFLAASVSLAAARDLALVSNKTNSVTVITVPDLVKICKAQTNRWPDGKPVTFIMRAPA
Ga0187782_116773931	3300017975	Tropical Peatland	VFYRRTMWMTLFLAASVSLATARDLAVVSNKANAVSAMALPDLVKICKAQTPRWPDGRPVTFIMRAPA
Ga0187816_100325771	3300017995	Freshwater Sediment	VLHRKALSLCLFLAASVSLAAARDLALVSNKTNSLSAIALPDLVKICKGQTSHWPDGKSVTFIMRNPGTPEMKFFLEKVYELPEAQVRDLIATAN
Ga0187804_100325921	3300018006	Freshwater Sediment	LSVGESVFYRRVLIAGLFFLVSVSLAAARDLALVANKANTVTAMGLPDLVKVCKAQTNRWPDGKPVTFIMR
Ga0187804_103793522	3300018006	Freshwater Sediment	VFYRRIVITSLFLAATVGLASARDLAVVSNKANAVSIITLPDFVKVCKAQTNRWPDGKPVTLIMRSPST
Ga0187805_100203311	3300018007	Freshwater Sediment	VFYRRIVSIALFLVAGVASASARDLAVVSNKANGVSAITLPDLVKVCKAQTNRWPDGRPVTLIMRAPSSPEMKIVLEKVFELPEAQVKELI
Ga0187857_102158251	3300018026	Peatland	VFHRRTLSVVLFLIASVTLAAARDLAIVSNKVNSVSSITLPDLVKVCKGQTGHWPDGKAVTFIMRNPSAPEMKILLEKVYELPDAQVKDLIFAAN
Ga0187871_103751701	3300018042	Peatland	MTNFHENQMADLLLWGASVFYRRILIVSLFVSSAVSLAAARDLALVSNKANSVSAITLPDLVKVSKGQTNRWPDGKSVTFIMRAPAVPEMKVLLEKVYELPES
Ga0187772_113182712	3300018085	Tropical Peatland	VFYRRATWITLFLAASVSLATARDLAVVSNKANAVSTMALPDLIKICKAQTPRWPDGKPVTFIMRAPASPEM
Ga0187769_108457222	3300018086	Tropical Peatland	VSYRRVLIVGFFFLFGVSLATARDLALVANKSNTITAMTLPDLVKVCKAQTAHWPDGKPVTFIMRSPSAPEMKILLEKV
Ga0187769_113710282	3300018086	Tropical Peatland	VSHRRTLSLCLFMAAAVSLASARDLALVSNKANTLTSITLPDLVKVCKAQMNRWPDGKPVTFVMRAPS
Ga0187770_117129101	3300018090	Tropical Peatland	VFYGRSLSILSLFLAAAVSLGSARDLAIVSNKTNPVSVITLADFAKVAKGQTNRWPDGKSVTFIMRAPSAPEMKLLLEKVYE
Ga0066662_111661592	3300018468	Grasslands Soil	VHYSRVILLISFLGVAMSLASARDLAVVSNKSNAVSTLAVPDLVKVSKGQTNRWPDGKSVTFIMRAPSTPEMKLFVQKVYE
Ga0210403_109718621	3300020580	Soil	VFYRYTLRLCLFFAVSASLAAARDLAVVSNKANTVSALTVPDLAKVCKGQTNRWPDGKAVTFIM
Ga0210401_114048901	3300020583	Soil	VSYGRVTSVFLFLAASVSLATARDLAVVSNKANSVNAIALPELVKVCKAQTNRWPDGKPVTFIMRGPATPEMKMVLEKVYELPEAQVK
Ga0210400_112356911	3300021170	Soil	VFYHQTLRVCAVLAASVSLAAARDLALVSNKANSVSAITLPDLMKVSKGQTNRWPNGKSVTLIMRSPSTPEMKLFLEKVYEVPQSQVKEIIASANH
Ga0210396_114664082	3300021180	Soil	MKIAARPIPSCGREHLFYRQTLSLCLFLAASVSLAAARDLALVSNKANSVASLTMPDLMKVAKGQTNRWPDGKAVTFIMRSPSVPE
Ga0210393_110146411	3300021401	Soil	LHRRISCVLIFVLASVSLGAARDLALVSNKTNGVSSISSPELVKLCKGEMNRWPDGKPVTLILRAPSTPELKTLLEKVYALNAEQV
Ga0210385_102549182	3300021402	Soil	MVGGFLAASISLAAARDLAVVSNKTNAVSAIALPDLVKICKAQTNRWPDGKPVTLIMRSPSAAEMKVV
Ga0210386_105236412	3300021406	Soil	LFYRQTLSLCLFLAASVSLAAARDLALVSNKANSVASLTMPDLMKVAKGQTNRWPDGKAVTFIMR
Ga0210394_105222763	3300021420	Soil	VFYRQTLSVCLLVAVSVSLATARDLALVSNKVNSVSALSVPDLVKICKGQTNRWPDGKPVTFIMRSPSSPM
Ga0210391_114819101	3300021433	Soil	LFYRQTLSLCLFLAASVSLAAARDLALVSNKANSVASLTMPDLMKVAKGQTNRWPDGKAVTFIMRSPSVPEMKLFLEKVYE
Ga0210390_115603891	3300021474	Soil	VFHRRTLSICLFLAASVSLAAGRDLALVSNKSNSVSTIALPDLVKVCKGQTNHWPDGKSVTFVMRNPGTPEMKLFL
Ga0210392_112788492	3300021475	Soil	MIAALFLLASVSLAAARDLAFVSNKANTINTLTLADLVKVCKGQTNRWPDGKPVTFIMRSTSAPETKILLEKIYEMPESGV
Ga0210410_112764672	3300021479	Soil	VFYPRTLSICLFLAASVSLAAARDLALVSNKANAISAITMADLVKVCKGQTSRWPDGKAVTFIMRSPSSPEMKLVLEKVYAVPESQAKEIIAS
Ga0126371_130286571	3300021560	Tropical Forest Soil	VFYRQILGTLVFYALSVSLAGARDLALVSNKANSLATITLPELVKVCKAQTNRWPDGKSVTLIMRAPSSPEMKMFLEKVYELSEAQV
Ga0212123_101013411	3300022557	Iron-Sulfur Acid Spring	MIAALFLLASVSLAAARDLAFVSNKANTINTLTLADLVKVCKGQTNRWPDGKPVTFIMRSTSAPETKILLEKI
Ga0212123_104895032	3300022557	Iron-Sulfur Acid Spring	VFYRKTLTVCLFLAASVSLAGARDLALVSNKVNSVSGITLPDLIKVCKGQNNRWPDGKSITFIMRNP
Ga0224564_10761622	3300024271	Soil	VFHRRILSVCLFLAASVSTAAARDLALVANKSNSVSAMALPDLVKVCKGQTNHWPDGKSVTFVMRNPGSPEMKLFLEKVYELSEANVKEIITSANQ
Ga0207700_104829043	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VFYRRIIAIALFVAAGVSVAAARDLAVVSNKANALTAMTLPDLVKVCKAQTNRWPDGKPVTLIMRAPASPEM
Ga0207664_102849591	3300025929	Agricultural Soil	VYHRRILALSLFLAASVSLAAARDLALVSNKSNPVSTITLPDLVKVCKGQTNHWPDGKSVTFIMRAPSAPEMKVLLEKIYELPEG
Ga0207665_100675675	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VGASVFYRRILSVLLFCALSVSLAAARDLALVSNKANSLATITLPELVKVCKAQTNRWPDGKPVTLIMRAPSSPEMKLF
Ga0207665_114837562	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VYHRRILALSLFLAANVSLAAARDLALVSNKTNPVSTITLPDLVKVCKGQTNHWPDGKSVTFIMRAPSAPEMKVLLEKIY
Ga0257155_10321081	3300026481	Soil	VFYRRNLSICLFLAASVSLAAARDLALVSNKANAISAITMADLVKVCKGQTSRWPDGKAVTFIMRSPSSPEM
Ga0207804_1262771	3300026849	Tropical Forest Soil	VFYRRSIAFFLFLAASVSLAAARDLALVSNKGNTFTTITLPDLVKVCKGQTNRWPDGKPVTFIMRA
Ga0207803_10252091	3300027000	Tropical Forest Soil	VFYRRSIAFFLFLAASVSLAAARDLALVSNKGNTFTTITLPDLVKVCKGQTNRWPDGKPVTFIMRAPSSAEMKLFLEK
Ga0209219_10106931	3300027565	Forest Soil	LLERALFYRQILSVCLFLAASVSLAAARDLALVSNKANSVSAITFPDLVKVSKGQTNRWPDGKSVTLIMRSPSTPEMKMFLEKIYELPESQVKEIIASAN
Ga0209811_102828481	3300027821	Surface Soil	MTKFHENRPHGLFCLVGASVFYRKIIGTSLFVIISLTLAAARDLAVVSNKANSLATISLPDLVKVCKAQTNRWPDGKPVTLIMRAPSTLEMKLFLEKVYDLP
Ga0209773_101963712	3300027829	Bog Forest Soil	VAGEGKRLFYRRAIIVSLFLLASVSLAAARDLALVSNKANTISTLTLADVVKVCKGQTNRWPDGKPVTFIMRNTSAPETKILLE
Ga0209580_100918471	3300027842	Surface Soil	VFYRQTLSILIFLAVSLSWAAARDLAVVSNKSNSVSVITLPDLVKFSKGQTNRWPDGKSVTLIMRAPSTPEIKLFLEKV
Ga0209380_101236673	3300027889	Soil	VFHRKILSILLFIAASASLASARDFALIANKTNSVSAITLPDLVKLCKGQTSHWPDGKQVTFIMRSPTAPEMKFFLEKVYEL
Ga0265351_10059931	3300028020	Soil	VAGEGKKLFYRRAMIAALFLLASVSLAAARDLAFVSNKANTINTLTLADLVKVCKGQTNRWPDGKPVTFIMRSTSAPETK
Ga0307504_103538331	3300028792	Soil	VFFRHVLAAVLLTLACAPLAAARDMALVSNKANTVTAITLAELMKICKGQTNRWMDGKAVTFVTRDPSAPEMKIVLE
Ga0308309_109278001	3300028906	Soil	VLPRRVVMAGVFFAAAVSLAAGRDLAVVSNKANSVNAMTVPELLKVCKAQNNHWPDGKPITFIMRAPGTPEMKLFLEKVYELR
Ga0302286_105738441	3300030047	Fen	VSYRRALGLCLFLSASVSLAAARDLALVANKANAMSAITLPDLVKVCKAQTNRWPDGKPVTFIMRAPGVPEMRVLL
Ga0311355_108761891	3300030580	Palsa	VAGEGKKLFYRRAMIVSLFLLASVSLAAARDLAFVSNKANTINTLTLVDLVKVCKGQTNRWPDGKPVTFIMRNTSAPE
Ga0310039_101482451	3300030706	Peatlands Soil	VFPRRVLMAGVFLLGAISLAAGRDLAVVTNKTNTVSAMTPPELVKVCKAQANRWPDGKPILFIMRAPGQPEMKLLLEKV
Ga0265741_1091342	3300030814	Soil	MIVSLFLLASVSLAAARDLAFVSNKANTVNAITVADLIKVCKGQTNHWPDGKPVTFIMRNTSAPEIKILLEKVY
Ga0170824_1215418004	3300031231	Forest Soil	VRRRFTLKILLFLVASASLAAARDLALVSNKANSVSAITLPDLVKICKGQTNHWPDGKPVTFIMRNPSAPEVRFFLEKIYEVPVTEVKEIISTANH
Ga0170818_1127402784	3300031474	Forest Soil	VRRRFTLKILLFLVASASLAAARDLALVSNKANSVSAITLPDLVKICKGQTNHWPDGKPVTFIMRNPSAPE
Ga0307476_110509971	3300031715	Hardwood Forest Soil	VFYRQTLSVCLLVAVSVSLAAARDLALVSNKVNSVSALTVPDLVKICKGQTNRWPDGKPVTFIMRSPSSPEMKLLLEKVYE
Ga0307474_109690411	3300031718	Hardwood Forest Soil	MTKFHENRPYGLSCLVGESVFYRKVISISLFVAVTVSLAAARDLAVVSNKANSFAAISLPDLVKVCKAQTNRWPDGKPVMLIMRAPTTPEMKLFLEKVYE
Ga0307477_101203984	3300031753	Hardwood Forest Soil	VFYRRVAAAALITVASNSLASARDLALVANKANSVTAVALPELVKICKAQTNRWVDGKPVTLIMRAPANPEM
Ga0307477_108546281	3300031753	Hardwood Forest Soil	VPYGRVTSVFLFLAASVSLAMARDLAVVSNKANSVSAIAFPDLVKVCKAQTNRWPDGKPVTFIMRGPATPEMKIILEKVYELPEAQVKQLITSA
Ga0307475_104169093	3300031754	Hardwood Forest Soil	VFYRRVAAAALITVASNSLASARDLALVANKANSVTAVALPELVKICKAQTNRWVDGKPVTLIMRAPANPEMKLLLEKVYELSDA
Ga0307478_116813451	3300031823	Hardwood Forest Soil	VFYRQTLSVCLLVAVSVSLAAARDLALVSNKVNSVSALTVPDLVKICKGQTNRWPDGKPVTFIMRSPS
Ga0310917_101799183	3300031833	Soil	VFYRKVLITTLLLAASASLAAARDLAVVSNKSNSLSAITLPDLIKVCKAQTNRWPDGKPVTLIMRAPSNPEMKLFLEKVFEL
Ga0310913_113001681	3300031945	Soil	LSGAGANVFYRKVLITTLLLAASASLAAARDLAVVSNKSNSLSAITLPDLIKVCKAQTNRWPDGKPVTLIMRAPSNPEMKLFL
Ga0307479_108511812	3300031962	Hardwood Forest Soil	VPRPSPFAGESVHHRSVLTIVLFLAASASLAAARDLAVVSNKSNAVSALTVPDLVKVCKGQTSRWPDAKPVTFIMRAPS
Ga0335079_115670611	3300032783	Soil	VAYCRILSLSLFMAVCASLATARDLAVVSNKGNGVSAMAMPELIKICKGQTNKWPDGRSVTFIMRAPSAPEMKLFLEKVYEM
Ga0335078_120993482	3300032805	Soil	VRYRQALIASIFLAFASSFAAARDLALVSNKSNALSGISVQDLVKVSKGQTNRWPDGKAVTFIMRAPASPEMKLLIEKVYEVPESEVRDLIIA
Ga0335081_102458221	3300032892	Soil	VAYRRILSLSLFVAVCTSLATARDLAVVSNKGNGVSGMAMPELIKICKGQTNKWPDGRSVTFIMRAPSAPEMKLFLEKVYEMPEAQVKELVAVA
Ga0335071_112019693	3300032897	Soil	MIPKRFPQNKGASVFFRQLNKIAVIVAAACSMAAARDLAVVSNKTNGLSTITLPELVKVCKAQTNRWPDGKPITLIMRAPAAPEMKVMLEKVFELPEAQVKDLI
Ga0335077_108837702	3300033158	Soil	VFFRQLVKIVIFVAAGCSMAAARDLAVVSNKANGLSAMTLPELVKVCKAQTNRWPDGKPVTVIMRGPAAPEMKVLLEKV
Ga0326728_102842112	3300033402	Peat Soil	VSYRRVLIFGLFFAVSVSLAAARDLALVSNKANTFSTITLPDLVKVCKGQTNRWSDGKPVTFVMRSPSAPEMKLLLEKVYGLSEAQVRELIVA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F058408

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences