Metagenome / Metatranscriptome Family F058395

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F058395
Family Type	Metagenome / Metatranscriptome
Number of Sequences	135
Average Sequence Length	51 residues
Representative Sequence	MSSDRSTTQTAGTGTGTFSAADLKRRMAEREAAKAAEELRHMREQEEKQKQVME
Number of Associated Samples	106
Number of Associated Scaffolds	135

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	99.26 %
% of genes from short scaffolds (< 2000 bps)	91.11 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (70.370 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (45.926 % of family members)
Environment Ontology (ENVO)	Unclassified (56.296 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (42.222 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Mixed	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 41.46% β-sheet: 0.00% Coil/Unstructured: 58.54%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 135 Family Scaffolds
PF00871	Acetate_kinase	76.30
PF13533	Biotin_lipoyl_2	3.70
PF05494	MlaC	3.70
PF01255	Prenyltransf	2.22
PF13742	tRNA_anti_2	1.48
PF01515	PTA_PTB	1.48
PF13561	adh_short_C2	0.74
PF00300	His_Phos_1	0.74

COG ID	Name	Functional Category	% Frequency in 135 Family Scaffolds
COG0282	Acetate kinase	Energy production and conversion [C]	76.30
COG3426	Butyrate kinase	Energy production and conversion [C]	76.30
COG2854	Periplasmic subunit MlaC of the ABC-type intermembrane phospholipid transporter Mla	Cell wall/membrane/envelope biogenesis [M]	3.70
COG0020	Undecaprenyl pyrophosphate synthase	Lipid transport and metabolism [I]	2.22
COG0280	Phosphotransacetylase (includes Pta, EutD and phosphobutyryltransferase)	Energy production and conversion [C]	1.48

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	70.37 %
Unclassified	root	N/A	29.63 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	70.37 %
Unclassified	root	N/A	29.63 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	70.37 %
Unclassified	root	N/A	29.63 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	48.89 %
Unclassified	root	N/A	29.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.63 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	20.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.63 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	6.67 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.48 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.63 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.67 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.74 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.63 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.67 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.74 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004080\|Ga0062385_10290466	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300004091\|Ga0062387_100577394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	801	Open in IMG/M
3300004635\|Ga0062388_102538550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	538	Open in IMG/M
3300005187\|Ga0066675_10506389	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300005434\|Ga0070709_11263556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	595	Open in IMG/M
3300005435\|Ga0070714_101301438	All Organisms → cellular organisms → Bacteria → Proteobacteria	709	Open in IMG/M
3300005435\|Ga0070714_102128118	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300005436\|Ga0070713_100060185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3174	Open in IMG/M
3300005454\|Ga0066687_10430630	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300005471\|Ga0070698_101718750	Not Available	580	Open in IMG/M
3300005471\|Ga0070698_102084128	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300005568\|Ga0066703_10058419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2180	Open in IMG/M
3300005764\|Ga0066903_103057462	Not Available	906	Open in IMG/M
3300006173\|Ga0070716_100535262	Not Available	871	Open in IMG/M
3300009038\|Ga0099829_10917236	Not Available	727	Open in IMG/M
3300009088\|Ga0099830_11203904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	629	Open in IMG/M
3300009137\|Ga0066709_103717046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	554	Open in IMG/M
3300010358\|Ga0126370_10414740	Not Available	1111	Open in IMG/M
3300010360\|Ga0126372_11623935	Not Available	686	Open in IMG/M
3300010361\|Ga0126378_10550541	Not Available	1268	Open in IMG/M
3300010361\|Ga0126378_12458343	All Organisms → cellular organisms → Bacteria → Proteobacteria	595	Open in IMG/M
3300010401\|Ga0134121_11183623	Not Available	763	Open in IMG/M
3300011271\|Ga0137393_10175011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1803	Open in IMG/M
3300011271\|Ga0137393_11701614	All Organisms → cellular organisms → Bacteria → Proteobacteria	520	Open in IMG/M
3300012205\|Ga0137362_10312709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1360	Open in IMG/M
3300012206\|Ga0137380_11050444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	695	Open in IMG/M
3300012208\|Ga0137376_11294989	All Organisms → cellular organisms → Bacteria → Proteobacteria	619	Open in IMG/M
3300012211\|Ga0137377_11460127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	611	Open in IMG/M
3300012363\|Ga0137390_11095282	Not Available	746	Open in IMG/M
3300012918\|Ga0137396_10957869	All Organisms → cellular organisms → Bacteria → Proteobacteria	623	Open in IMG/M
3300012927\|Ga0137416_11493558	All Organisms → cellular organisms → Bacteria → Proteobacteria	613	Open in IMG/M
3300016294\|Ga0182041_10890321	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300016319\|Ga0182033_10405163	Not Available	1154	Open in IMG/M
3300016319\|Ga0182033_10701095	Not Available	886	Open in IMG/M
3300016319\|Ga0182033_11308087	All Organisms → cellular organisms → Bacteria → Proteobacteria	651	Open in IMG/M
3300016341\|Ga0182035_10063705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2561	Open in IMG/M
3300016341\|Ga0182035_11229947	Not Available	669	Open in IMG/M
3300016357\|Ga0182032_10002364	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	8812	Open in IMG/M
3300016371\|Ga0182034_10128558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1868	Open in IMG/M
3300016371\|Ga0182034_10957685	Not Available	738	Open in IMG/M
3300016371\|Ga0182034_11529301	All Organisms → cellular organisms → Bacteria → Proteobacteria	585	Open in IMG/M
3300016387\|Ga0182040_11418249	All Organisms → cellular organisms → Bacteria → Proteobacteria	588	Open in IMG/M
3300016422\|Ga0182039_10010214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5414	Open in IMG/M
3300016422\|Ga0182039_10066930	All Organisms → cellular organisms → Bacteria → Proteobacteria	2522	Open in IMG/M
3300016422\|Ga0182039_11274793	Not Available	665	Open in IMG/M
3300016445\|Ga0182038_11686892	All Organisms → cellular organisms → Bacteria → Proteobacteria	571	Open in IMG/M
3300017972\|Ga0187781_10529121	Not Available	847	Open in IMG/M
3300020199\|Ga0179592_10180703	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300020579\|Ga0210407_11441255	All Organisms → cellular organisms → Bacteria → Proteobacteria	510	Open in IMG/M
3300021168\|Ga0210406_10593571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	865	Open in IMG/M
3300021168\|Ga0210406_10883418	Not Available	674	Open in IMG/M
3300021168\|Ga0210406_10968333	All Organisms → cellular organisms → Bacteria → Proteobacteria	635	Open in IMG/M
3300021170\|Ga0210400_10441503	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
3300021361\|Ga0213872_10451928	All Organisms → cellular organisms → Bacteria → Proteobacteria	516	Open in IMG/M
3300021372\|Ga0213877_10148757	Not Available	739	Open in IMG/M
3300021432\|Ga0210384_10276460	All Organisms → cellular organisms → Bacteria → Proteobacteria	1512	Open in IMG/M
3300021478\|Ga0210402_11574514	Not Available	584	Open in IMG/M
3300022726\|Ga0242654_10159991	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300024288\|Ga0179589_10318041	Not Available	703	Open in IMG/M
3300025905\|Ga0207685_10679975	Not Available	559	Open in IMG/M
3300025916\|Ga0207663_10549382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	903	Open in IMG/M
3300025916\|Ga0207663_11311720	All Organisms → cellular organisms → Bacteria → Proteobacteria	583	Open in IMG/M
3300026360\|Ga0257173_1047372	All Organisms → cellular organisms → Bacteria → Proteobacteria	604	Open in IMG/M
3300026475\|Ga0257147_1030004	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300027603\|Ga0209331_1056387	All Organisms → cellular organisms → Bacteria	989	Open in IMG/M
3300027812\|Ga0209656_10378049	All Organisms → cellular organisms → Bacteria → Proteobacteria	639	Open in IMG/M
3300028536\|Ga0137415_10341707	Not Available	1300	Open in IMG/M
3300028536\|Ga0137415_10503313	All Organisms → cellular organisms → Bacteria	1019	Open in IMG/M
3300030967\|Ga0075399_11452237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	554	Open in IMG/M
3300031231\|Ga0170824_102098751	All Organisms → cellular organisms → Bacteria → Proteobacteria	638	Open in IMG/M
3300031543\|Ga0318516_10832779	All Organisms → cellular organisms → Bacteria → Proteobacteria	520	Open in IMG/M
3300031544\|Ga0318534_10329327	Not Available	880	Open in IMG/M
3300031545\|Ga0318541_10340639	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300031546\|Ga0318538_10050078	All Organisms → cellular organisms → Bacteria → Proteobacteria	2037	Open in IMG/M
3300031546\|Ga0318538_10123988	All Organisms → cellular organisms → Bacteria	1351	Open in IMG/M
3300031546\|Ga0318538_10834266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	501	Open in IMG/M
3300031549\|Ga0318571_10048527	Not Available	1257	Open in IMG/M
3300031572\|Ga0318515_10198253	All Organisms → cellular organisms → Bacteria	1075	Open in IMG/M
3300031572\|Ga0318515_10617988	All Organisms → cellular organisms → Bacteria → Proteobacteria	575	Open in IMG/M
3300031679\|Ga0318561_10369201	Not Available	787	Open in IMG/M
3300031680\|Ga0318574_10592007	All Organisms → cellular organisms → Bacteria → Proteobacteria	650	Open in IMG/M
3300031682\|Ga0318560_10143496	All Organisms → cellular organisms → Bacteria	1261	Open in IMG/M
3300031713\|Ga0318496_10680880	All Organisms → cellular organisms → Bacteria → Proteobacteria	567	Open in IMG/M
3300031718\|Ga0307474_10956756	Not Available	678	Open in IMG/M
3300031719\|Ga0306917_10681451	Not Available	808	Open in IMG/M
3300031748\|Ga0318492_10247209	Not Available	921	Open in IMG/M
3300031764\|Ga0318535_10009065	All Organisms → cellular organisms → Bacteria → Proteobacteria	3472	Open in IMG/M
3300031768\|Ga0318509_10755409	All Organisms → cellular organisms → Bacteria → Proteobacteria	539	Open in IMG/M
3300031771\|Ga0318546_10203555	All Organisms → cellular organisms → Bacteria	1352	Open in IMG/M
3300031781\|Ga0318547_10677636	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300031798\|Ga0318523_10284011	Not Available	826	Open in IMG/M
3300031821\|Ga0318567_10281174	Not Available	937	Open in IMG/M
3300031832\|Ga0318499_10082050	All Organisms → cellular organisms → Bacteria	1236	Open in IMG/M
3300031832\|Ga0318499_10275460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	652	Open in IMG/M
3300031833\|Ga0310917_10100747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1859	Open in IMG/M
3300031833\|Ga0310917_10821082	Not Available	627	Open in IMG/M
3300031845\|Ga0318511_10349335	Not Available	673	Open in IMG/M
3300031846\|Ga0318512_10042431	All Organisms → cellular organisms → Bacteria	2000	Open in IMG/M
3300031859\|Ga0318527_10173047	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300031879\|Ga0306919_11052626	All Organisms → cellular organisms → Bacteria → Proteobacteria	621	Open in IMG/M
3300031879\|Ga0306919_11303076	All Organisms → cellular organisms → Bacteria → Proteobacteria	550	Open in IMG/M
3300031880\|Ga0318544_10167444	Not Available	845	Open in IMG/M
3300031880\|Ga0318544_10396883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	536	Open in IMG/M
3300031890\|Ga0306925_10633207	All Organisms → cellular organisms → Bacteria	1126	Open in IMG/M
3300031897\|Ga0318520_10180372	All Organisms → cellular organisms → Bacteria	1238	Open in IMG/M
3300031912\|Ga0306921_10648200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1218	Open in IMG/M
3300031912\|Ga0306921_11253426	Not Available	823	Open in IMG/M
3300031912\|Ga0306921_11461807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	749	Open in IMG/M
3300031941\|Ga0310912_11144310	All Organisms → cellular organisms → Bacteria → Proteobacteria	593	Open in IMG/M
3300031945\|Ga0310913_10431379	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300031946\|Ga0310910_10373595	All Organisms → cellular organisms → Bacteria	1128	Open in IMG/M
3300031954\|Ga0306926_10913660	All Organisms → cellular organisms → Bacteria	1050	Open in IMG/M
3300031962\|Ga0307479_11107268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	758	Open in IMG/M
3300032010\|Ga0318569_10590297	All Organisms → cellular organisms → Bacteria → Proteobacteria	517	Open in IMG/M
3300032025\|Ga0318507_10197972	Not Available	867	Open in IMG/M
3300032042\|Ga0318545_10023487	All Organisms → cellular organisms → Bacteria → Proteobacteria	1978	Open in IMG/M
3300032043\|Ga0318556_10410244	Not Available	709	Open in IMG/M
3300032044\|Ga0318558_10452030	All Organisms → cellular organisms → Bacteria → Proteobacteria	640	Open in IMG/M
3300032044\|Ga0318558_10493291	All Organisms → cellular organisms → Bacteria → Proteobacteria	611	Open in IMG/M
3300032052\|Ga0318506_10101666	All Organisms → cellular organisms → Bacteria	1229	Open in IMG/M
3300032052\|Ga0318506_10226165	Not Available	827	Open in IMG/M
3300032055\|Ga0318575_10412672	Not Available	685	Open in IMG/M
3300032059\|Ga0318533_10094157	All Organisms → cellular organisms → Bacteria → Proteobacteria	2063	Open in IMG/M
3300032059\|Ga0318533_10243019	All Organisms → cellular organisms → Bacteria	1298	Open in IMG/M
3300032063\|Ga0318504_10009487	All Organisms → cellular organisms → Bacteria → Proteobacteria	3312	Open in IMG/M
3300032064\|Ga0318510_10474687	All Organisms → cellular organisms → Bacteria → Proteobacteria	539	Open in IMG/M
3300032065\|Ga0318513_10325240	Not Available	748	Open in IMG/M
3300032066\|Ga0318514_10007275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4589	Open in IMG/M
3300032066\|Ga0318514_10366869	Not Available	763	Open in IMG/M
3300032067\|Ga0318524_10468496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	660	Open in IMG/M
3300032068\|Ga0318553_10287924	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300032180\|Ga0307471_101285674	Not Available	894	Open in IMG/M
3300032205\|Ga0307472_101612995	All Organisms → cellular organisms → Bacteria → Proteobacteria	638	Open in IMG/M
3300032261\|Ga0306920_102890959	All Organisms → cellular organisms → Bacteria → Proteobacteria	651	Open in IMG/M
3300032261\|Ga0306920_104366994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	507	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.26%
Host-Associated	Host-Associated	0.74%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.30%
Aquatic	Environmental → Aquatic	2.96%
Plants	Host-Associated → Plants	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.30%
Freshwater	Environmental → Aquatic → Freshwater	2.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	86.67%
Loam	Environmental → Terrestrial → Soil → Loam	8.89%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.96%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	68.15%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.41%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.48%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	45.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.52%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.11%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.22%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.48%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.74%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.74%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.74%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021361	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2	Host-Associated	Open in IMG/M
3300021372	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026360	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-B	Environmental	Open in IMG/M
3300026475	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-A	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030967	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062385_102904661	3300004080	Bog Forest Soil	MSSDRSTTQTAATGTGTFSAADLKRRMAEREAAKAAEELHRMREHEEKQKAVMEEFHKPP
Ga0062387_1005773942	3300004091	Bog Forest Soil	MSEDPSMTRPQEPAFFPPADIKHRMAEREAAKAADDLRHAKEQEEKQKAVMEEFHKPFD
Ga0062388_1025385501	3300004635	Bog Forest Soil	MSENRSTAQPTSAGVYSAADIKHRIAEREAAKAAEDLRHVKDQEEKQKAVMEELHKPFDRSA
Ga0066675_105063892	3300005187	Soil	MSESRTTTKPAEAGMFSAADIKRRMTEREVQKAAEELRHMKEQEEKQKAVMAEFHQPAA
Ga0070709_112635561	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSENRSSAQPAGPGVFSAADMKRRMAEREAAKAAEELRHMKEQEEKQKAVM
Ga0070714_1013014381	3300005435	Agricultural Soil	MSENRAATQPPGAGIFSAADLKRRMAERETAKAAEELRRMQEQEEKQKAVMAEFHKPP
Ga0070714_1021281182	3300005435	Agricultural Soil	MSENRSSTQPAEPGVFSAADMKRRMAEREAAKAAEELRHMKEQEEKQKAVMEEFHK
Ga0070713_1000601854	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSDSRSTPQSAGDGNFSAADLRRRMAEREAAKAAEELRHMQEQEEKQKAVMA
Ga0066687_104306301	3300005454	Soil	MSESRTTTKPAEAGMFSAADIKRRMTEREVQKAAEELRHMKEQEEKQKAVMAEFHQPAAR
Ga0070698_1017187501	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MSENRSATPPAGAGIFSVADLKRRMAEREAAKAAEELRHMREQEEKQKA
Ga0070698_1020841281	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MSSDRGTTQPAGTGAGTFSAADLKRRMAEREAAKAAEELQRMREHEEKQKAVMEEFHK
Ga0066703_100584193	3300005568	Soil	MSESRTTTKPAEAGMFSAADIKRRMTEREVQKAAEELRHMKEQEEKQKAVMAEFHQPAARSPEQ
Ga0066903_1030574621	3300005764	Tropical Forest Soil	MSSDHSTTQTAGTGIATFSAADIKHRMAEREAAKGAEEMRRMREQEEKQKAVMAEFHKP
Ga0070716_1005352621	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MSENRSTTPPAGAGKFSAADLRRRIVEREAAKAAEEMRHMKEQEDKQKAVMEEFHK
Ga0099829_109172361	3300009038	Vadose Zone Soil	MSSEDRSTRQTGGPGKGVGAFSAADLRRHMAEREAAKAAEELRHMREQEEKQKALMEEFHKP
Ga0099830_112039041	3300009088	Vadose Zone Soil	MSENRGATQPTGAGIFSAADLKRRMAEREAAKAAEEVRHMQEQEEKQKAVMA
Ga0066709_1037170461	3300009137	Grasslands Soil	MSENRGTTQPTGAGVFSAADLKRRMAEREAAEAAKEVRHMQEQEEKQKAVMAEFHKPPERTTD
Ga0126370_104147402	3300010358	Tropical Forest Soil	MSESSGTAKPAAAGIFSVADIKRRMAEREAQKAAEELRHMKEQEEKQKAVMAEFHAPPARTPE
Ga0126372_116239352	3300010360	Tropical Forest Soil	MSSDRSTTQAAGTGTGTFSAADLKRRMAEREAAKAAEELRHMREQEEKQ
Ga0126378_105505412	3300010361	Tropical Forest Soil	MSSDRGTTQPAGTGAGTFSAADLKRRMAEREAAKAAEELQRMREQE
Ga0126378_124583432	3300010361	Tropical Forest Soil	MSSDRTTQTAGTGTGAFSAADLKRRMAEREAAKAAEELAHMREQEEQQKKVME
Ga0134121_111836232	3300010401	Terrestrial Soil	MSENRSTTPPAGAGKFSAADLRRRMAERETAKAAEEMRHMKEQEDKQKAVMEEFHQPPARTPD
Ga0137393_101750113	3300011271	Vadose Zone Soil	MSSEDRSTPQTVGTGAGTFSAADLKRRMAERQAARAAEELQRIREQEEKQKAVMEEFHKP
Ga0137393_117016141	3300011271	Vadose Zone Soil	MADTRSTPQPAGSGSFSAADLRRRMAEREAAKAAEELRHMQEQEEKQKA
Ga0137362_103127093	3300012205	Vadose Zone Soil	MASDNHTVPKTAAAGTFSVADLRRRMAEREAAKAAEELQRMREHEE
Ga0137380_110504442	3300012206	Vadose Zone Soil	MSENRSTTQAAGAGIFSAADLKRRMAEREAAEAAKEVRHMQEQKEKQKAVMAEFHKPPERTA
Ga0137376_112949892	3300012208	Vadose Zone Soil	MSETRSTTKPAGAGIFSATDIKRRMAEREAQKAAEELRHMKEQEEKQKAVMAEFH
Ga0137377_114601272	3300012211	Vadose Zone Soil	MSENRGTTQPTGPGTFSAADLKRRMAEREAAKTAEEARHMQEQKEKQKAVMAEFN
Ga0137390_110952822	3300012363	Vadose Zone Soil	MSSEDRNTRQTGVPGKGVGSFSAADLRRHMAEREAAKAVEELRHMREQEEK
Ga0137396_109578692	3300012918	Vadose Zone Soil	MSSDRGTTQPAGTGAGTFSAADLKQRMAERTAARAAEELPDWEKT
Ga0137416_114935581	3300012927	Vadose Zone Soil	MSSDRGTTQTTGTGSGTFSAADLKRRMAERAAARAAEELQHMREQEEKQKAVIEEFHKPPART
Ga0182041_108903212	3300016294	Soil	MSSDHSTPQTPGTGSGPFSAADIKRRMAERDAAKAAEELRRMREQEE
Ga0182033_104051631	3300016319	Soil	MSSDRSTTQTARTENGTFSAADLKRRMAEREAAKAAEELRRM
Ga0182033_107010952	3300016319	Soil	MSSDHSTTQPAGAGAGTFSAADLKRRMAEREAAKAAEELRRMREQEEKQKA
Ga0182033_113080872	3300016319	Soil	MSSDRTTQTAGAGTGAFSAADLKRRMAEREAAKAAEELRRTREQEEKQKAVMA
Ga0182035_100637054	3300016341	Soil	MSGDRSTTQPAGTGVFSAADLKRRMAEREAAKAAEELRHMQEQEEKQKAVMA
Ga0182035_112299472	3300016341	Soil	MSSDHSATPTAGTGTGPFSAADIKRRMAEREAAKAAEELRRMREQEEKQKAVMAEFLKPPERT
Ga0182032_100023648	3300016357	Soil	MSESRGTAKPAAAGIFSAADVKRRMAEREAQKAAEELRHMQEQAEKQKAVM
Ga0182034_101285582	3300016371	Soil	MSENRGSPQPAGVGVFSTADIKRRMAEREAAKAAEELRDMKEQEEKQK
Ga0182034_109576852	3300016371	Soil	MSSDRSTTQTPGTGAGPFSAADIKRRMAEREAAKAAEELRRMREQEEKQKAVMAEFHKPPERT
Ga0182034_115293011	3300016371	Soil	MSSDHSTTQPAGVGAGTFSVADLKRRMAEREAAKAAEELRRMREQEEKQKAVMAEFHKPP
Ga0182040_114182492	3300016387	Soil	MSSDHSTTQPAGAGAGTFSAADLKRRMAEREAAKAAEELRRMREQEEKQ
Ga0182039_100102141	3300016422	Soil	MSSDRSTTQTAGTGTGTFSAADLKRRMAEREAAKAAEELRRMR
Ga0182039_100669304	3300016422	Soil	MSESRGTTPPAGAGSFSATDLRRRMAEREAAKAAEELRHMQEQEEKQKAVMVEFYKPPER
Ga0182039_112747932	3300016422	Soil	MSSDHSATPTAGTGTGPFSAADIKHRMAEREAAKAAEELRRMREQEDKQKAVMA
Ga0182038_116868922	3300016445	Soil	MSENRSAPQPTGGGGFSAADLRRRMAEREAAKAAEEMRHIKDQEEKQKAVMEEF
Ga0187781_105291212	3300017972	Tropical Peatland	MSSENRGATAPAGAFSATDLKRRMAEREAAKAAEELRLMREQEEKQKSVMEEF
Ga0179592_101807031	3300020199	Vadose Zone Soil	MSENRSSTQPAAPGIFSAADMKRRMAEREAAKAAEELRHMKEQEEKQKAVMEELHKP
Ga0210407_114412551	3300020579	Soil	MSESRSTTSGNFSAADLRRRMTEREAAKAAEEMRHMKEQEDKQKAVMEEFHKPPDRTP
Ga0210406_105935711	3300021168	Soil	MSENRNPGTFSAADLRRRMAEREAAKAAEEMRRIKEQQEKQKTVMEEFHKPPDRTPEQVM
Ga0210406_108834182	3300021168	Soil	MSSDRSTTQTAGTGTGTFSVADLKRRMAEREAAKAAEE
Ga0210406_109683331	3300021168	Soil	MSSDRGTTQTAGTFSAADLKRRMAEREAAKAAEELQRMREHEEKQK
Ga0210400_104415032	3300021170	Soil	MAENRSTTQPTGAGVFSAADLKRRMAEREAAEAAKEVRYM
Ga0213872_104519281	3300021361	Rhizosphere	MSDTRSPTQPPAAGTFSAADLKRRMAEREAAKAAEEARHMREQEERQKA
Ga0213877_101487571	3300021372	Bulk Soil	MSDNRSPTQPPAAGSFSAADLKRRMAEREAAKAAEEA
Ga0210384_102764603	3300021432	Soil	MSESRSTTSGNFSAADLRRRMTEREAAKAAEEMRHMKEQEDKQKAVMEEFHKPPDRTPDQLMQ
Ga0210402_115745142	3300021478	Soil	MSDSRSTPQSAGDGNFSAADLRHRMAEREAAKAAEELRHMQEQEEKQKAVMAEFHKP
Ga0242654_101599912	3300022726	Soil	MSESHSTTSGNFSAADLRRRMTEREAAKAAEEVRHMKEQEDKQKAVMEEFHKP
Ga0179589_103180412	3300024288	Vadose Zone Soil	MSENRSSAQPAAPGIFSAADMKRRMAEREAAKAAEELRHMKEQEEKQKAVMEEFHKLLGRTAEQ
Ga0207685_106799752	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MSDSRSTPRSAGAGNFSVADLRRRMAEREAAKAAEELRHMQEQEEKQKAVM
Ga0207663_105493821	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MSENRNTQTFSAADLRRRMAEREAAKAAEEMRRLKEQQEKQKTVMEEFHKPPDRTPEQVMQLVM
Ga0207663_113117202	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MSEGRSTTKPAGADFFSAADIKRRMAEREAQKAADELRQMKEQEEKQKAVMAEFHKPADRSPE
Ga0257173_10473721	3300026360	Soil	MSSDRGTTQIAGTGAGTFSAADLKRRMAERAAARAAEELQHM
Ga0257147_10300042	3300026475	Soil	MSENRSSTQPAAPGIFSAADMKRRMAEREAAKAAEELRHMKEQEEKQKAVIEELHKPLEGTP
Ga0209331_10563872	3300027603	Forest Soil	MSSDRGTTQIAGTGAGTFSAADLKRRMAERATARAAEELQHMREQEEKQKAVMEEFHKPP
Ga0209656_103780492	3300027812	Bog Forest Soil	MSSDHSTTQTAGTGTGTFSATDLKRRMAEREAAKAAEELRRMRE
Ga0137415_103417071	3300028536	Vadose Zone Soil	MAENRSTTQSTGAGVFSVADLRRRMAEREAAEAAKEVRHMQEQKEKEKAVM
Ga0137415_105033131	3300028536	Vadose Zone Soil	MSENRSSTQPAAPGIFSAADMKRRMAEREAAKAAEELRHMKEQEEKQKAVIE
Ga0075399_114522371	3300030967	Soil	MSSDRDTTQTAGTGTFSAADLRRRMAEREAAKAAEELQRMREQEEKQKAVMAEFHKPPERTRSR
Ga0170824_1020987512	3300031231	Forest Soil	MSSDRGNTPTAGTGAGTFSAADLKRRMAEREAAKAAEELARMRKHEEEQEAVMAEFHKPPER
Ga0318516_108327792	3300031543	Soil	MSSDHSTTQPAGVGAGTFSVADLKRRMAEREAAKAAEELRRMREQ
Ga0318534_103293272	3300031544	Soil	MSSDHSTTQPAGVGAGTFSVADLKRRMAEREAAKAAEELRRMREQEEKQKAVMAE
Ga0318541_103406392	3300031545	Soil	MSSDRSTTQAPGTGTGTFSAADIKRRMAEREAAKAAEELRRMREQE
Ga0318538_100500783	3300031546	Soil	MSSDRSTTQTAGTGTGTFSAADLKRRMAEREAAKAAEELRHM
Ga0318538_101239881	3300031546	Soil	MSSDRTTTPTFSAADIKRRMAEREAAKAAEELRRMREQEE
Ga0318538_108342662	3300031546	Soil	MSSEQRSTKPATAGTFSAADLKRRMAEREAAKAAEELRQMREHEQKQKAVMEEFHKPPERTP
Ga0318571_100485271	3300031549	Soil	MSSDRSTTQTAGTGTFSAADLKRRMAEREAAKAAE
Ga0318515_101982531	3300031572	Soil	MSSDRSTTQTAGTGTGTFSAADLKRRMAEREAAKAAEELRRMREHEE
Ga0318515_106179882	3300031572	Soil	MSSDHSTTQPAGAGAGTFSAADLKRRMAEREAAKAAE
Ga0318561_103692012	3300031679	Soil	MSSDRSTTQTARTENGTFSAADLKRRMAEREAAKAAEELLRMRE
Ga0318574_105920071	3300031680	Soil	MSESRGTAKPAAAGIFSAADVKRRMAEREAQKAAEELRHMQEQAEKQKAVMAEFHAPPARTPE
Ga0318560_101434961	3300031682	Soil	MSSDHSTTQPAGVGAGTFSVADLKRRMAEREAAKAAEELRRMREQE
Ga0318496_106808802	3300031713	Soil	MSSDRNTTQTFSVAEIKRRMAEREAAKAAEELRRMREQEEKQKAVMAEFHKPPERTP
Ga0307474_109567561	3300031718	Hardwood Forest Soil	MSSDHSTTQTAATGTGTFSAADLKRRMAEREAAKAAEELRRMREH
Ga0306917_106814512	3300031719	Soil	MSSDRTTQTAGAGTGAFSAADLKRRMAEREAAKAAEELRRTREQEEKQKAVMAEFLK
Ga0318492_102472092	3300031748	Soil	MSSDRSTTQTFSAADIKRRMAERESAKAAEELRRMREQEEKQKAVM
Ga0318535_100090651	3300031764	Soil	MSSDRSTTQTAGTGTFSAADLKRRMAEREAAKAAEELRHMREQEEKQKQVMAEFHKP
Ga0318509_107554092	3300031768	Soil	MSDNRSPTQPGAGAFSAADIKHRMAEREAAKAAEEARHMREQEEHQKAVMEEFH
Ga0318546_102035551	3300031771	Soil	MSSDRSTTQAPGTGTGTFSAADIKRRMAEREAAKAAEELRRMREQEDKQKA
Ga0318547_106776361	3300031781	Soil	MSSDRTTTPTFSAADIKRRMAEREAAKAAEELRRMREQEEKQK
Ga0318523_102840112	3300031798	Soil	MSSDRSTTQTPGTGAGPFSAADIKRRMAEREAAKAAEELRRMREQEEKQKAVMAEF
Ga0318567_102811741	3300031821	Soil	MSSDRSTTQTAGTGTGTFSAADLKRRMAEREAAKAAEELRH
Ga0318499_100820501	3300031832	Soil	MSSDRSTTQAPGTGTGTFSAADIKRRMAEREAAKAAEELRRMREQEEKQKAVMAEFH
Ga0318499_102754601	3300031832	Soil	MSENRGSMQPARVGVFSTADIKRRMAEREAAKAAEELRHMKEQEEKQKAVIDEFHKPLE
Ga0310917_101007473	3300031833	Soil	MSSDRSTTQTAGTGTGTFSAADLKRRMAEREAAKAAEELRRMREHEEKQKAVMEEFHKPP
Ga0310917_108210821	3300031833	Soil	MSSDHSKTQTAGTGTATFSAADLKRRMAEHEAAKAAE
Ga0318511_103493351	3300031845	Soil	MSSDHSTPQTPGTGSGPFSAADIKRRMAEREAAKAAEELRRMREQEEKQK
Ga0318512_100424313	3300031846	Soil	MSSDHSTTQTAATGTGTFSAADLKRRMAEREAAKAAEELRRMREHEEKQKAVMEEFH
Ga0318527_101730471	3300031859	Soil	MSSDRTTTPTFSAADIKRRMAEREAAKAAEELRRMREQ
Ga0306919_110526262	3300031879	Soil	MSSDHSTTQPAGVGAGTFSVADLKRRMAEREAAKAAEELRRMREQEEK
Ga0306919_113030762	3300031879	Soil	MSSDRTTQTAGAGTGAFSAADLKRRMAEREAAKAAEELRRTREQEEKQKAVMAEFLKPPE
Ga0318544_101674441	3300031880	Soil	MSSDRSTTQTARTENGTFSAADLKRRLAEREAAKAAEE
Ga0318544_103968832	3300031880	Soil	MSENRNTGRFSAADLRRRMAEREAAKAAEEMRRLKEQEEKQKAVMEEFHKPPDRTP
Ga0306925_106332071	3300031890	Soil	MSSDHSTTQPAGVGAGTFSVADLKRRMAEREAAKAAEELRRMREQEEKQ
Ga0318520_101803722	3300031897	Soil	MSSDHSTTQPAGVGAGTFSVADLKRRMAEREAAKAAEELRRMREQEEKQKAVMAEF
Ga0306921_106482003	3300031912	Soil	MSSDRSTIQATGTGTGTFSAADLKRRMADREAAKAA
Ga0306921_112534262	3300031912	Soil	MSSENRSTPPTRPGGTFSATDLKRRMAEREAAKAAEALRHAREQEEHQKAV
Ga0306921_114618072	3300031912	Soil	MSSEQRSTKPATAGTFSAADLKRRMAEREAAKAAEELSRMKEQEERQKAVMAEFHKPPDRTAE
Ga0310912_111443102	3300031941	Soil	MSSDRSTTQAPGTGTGTFSAADIKRRMAEREAAKAAEELRRMREQEEKQKAVMAEF
Ga0310913_104313792	3300031945	Soil	MSSDRNTTQTFSVADIKRRMAEREAAKAAEELRRM
Ga0310910_103735951	3300031946	Soil	MSSDRSTTQAPGTGTGTFSAADIKRRMAEREAAKAAEELRRMREQEEKQKAVM
Ga0306926_109136601	3300031954	Soil	MSSDRNTTQTFSVAEIKRRMAEREAAKAAEELRRMREQ
Ga0307479_111072681	3300031962	Hardwood Forest Soil	MSSDHSTTQTAGTGTGTFSAADLRRRMAEREAAKAAEEVARMREHEEKQKA
Ga0318569_105902972	3300032010	Soil	MSSDHSTTQPAGVGAGTFSVADLKRRMAEREAAKAAE
Ga0318507_101979721	3300032025	Soil	MSSDHSTTQPAGVGAGTFSVADLKRRMAEREAAKAAEELRRMREQEEKQKAVMAEFH
Ga0318545_100234873	3300032042	Soil	MSDNRSPTQPPGAAAFSAADIKRRMAEREAAKAAEELRHMREQEEHQKAVMDE
Ga0318556_104102442	3300032043	Soil	MSESRGTTPPAGAGSFSATDLRRRMAEREAAKAAEELRHMQEQEEKQKAVMAEFY
Ga0318558_104520302	3300032044	Soil	MSSDHSTTQTAATGTGTFSAADLKRRMAEREAAKAAEELRRMREHEEKQKAVMEEFHKPP
Ga0318558_104932911	3300032044	Soil	MSSEGRGATPSTFSAADLKRRMAEREAARAAEEVRRMQAQQEQQKAVMAEFH
Ga0318506_101016661	3300032052	Soil	MSSDRSTTQAPGTGTGTFSAADIKRRMAEREAAKAAEE
Ga0318506_102261651	3300032052	Soil	MSSDRSTTQTPGTGAGPFSAADIKRRMAEREAAKAA
Ga0318575_104126722	3300032055	Soil	MSSDRSTTQTARTENGTFSAADLKRRMAEREAAKAAEELRHM
Ga0318533_100941571	3300032059	Soil	MSEHRSSTHPAGTGAFSAADIKRKMAEREAAKAAEEMRHAKEQEEKQKAVLE
Ga0318533_102430192	3300032059	Soil	MSSDHSTPQTPGTGSGPFSAADIKRRMAERDAAKAAEELRRMREQEEKQ
Ga0318504_100094871	3300032063	Soil	MSSDRSTTQTPGTGAGPFSAAGIKRRMAEREAATRLP
Ga0318510_104746871	3300032064	Soil	MSSDRSTTQTAGTGTGTFSAADLKRRMAEREAAKAAEELRRMREHE
Ga0318513_103252402	3300032065	Soil	MSSDRSTTQTPGTGAGPFSAADIKRRMAEREAAKAAE
Ga0318514_100072755	3300032066	Soil	MSSDRSTTQTAGTGTGTFSAADLKRRMAEREAAKAAEELR
Ga0318514_103668692	3300032066	Soil	MSSDRSTTQTFSAADIKRRMAERESAKAAEELRRMREQEEKQKAVMAEFHKPP
Ga0318524_104684961	3300032067	Soil	MSSDRSTTQTAGTGTGTFSAADLKRRMAEREAAKAAEELRHMREQEEKQKQVME
Ga0318553_102879242	3300032068	Soil	MSSDRSTTQTARTENGTFSAADLKRRMAEREAAKAAEELRRMREHEEKQKAVMEEF
Ga0307471_1012856741	3300032180	Hardwood Forest Soil	MSSDRNTTQTPSTGTATFSAADLKRRMAEREAAKAA
Ga0307472_1016129952	3300032205	Hardwood Forest Soil	MSSDRGTTQTAEAGAGTFSAADLKRRMAERDAAKAAEELQRMREHEEK
Ga0306920_1028909591	3300032261	Soil	MSSDRSTTQTPGTGTGLFSAADIKRRMAERETAKAAEELRRMREQEEKQKAVMAEFH
Ga0306920_1043669942	3300032261	Soil	MSSEQRSTKPATAGTFSAADLKRRMAEREAAKAAEE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F058395

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences