NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F058385

Metagenome / Metatranscriptome Family F058385

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F058385
Family Type Metagenome / Metatranscriptome
Number of Sequences 135
Average Sequence Length 79 residues
Representative Sequence MSNREELVVFMTLPLGVEESIIPGVLASRGIPVHLSERYLARQGRYVEIQVPASRLEDARQALDDAKRVGEQLETGNEG
Number of Associated Samples 94
Number of Associated Scaffolds 135

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 66.67 %
% of genes near scaffold ends (potentially truncated) 25.19 %
% of genes from short scaffolds (< 2000 bps) 72.59 %
Associated GOLD sequencing projects 84
AlphaFold2 3D model prediction Yes
3D model pTM-score0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (58.519 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(24.444 % of family members)
Environment Ontology (ENVO) Unclassified
(51.111 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(79.259 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 32.71%    β-sheet: 22.43%    Coil/Unstructured: 44.86%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.53
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 135 Family Scaffolds
PF07238PilZ 10.37
PF08327AHSA1 3.70
PF00072Response_reg 2.96
PF03446NAD_binding_2 2.22
PF00069Pkinase 1.48
PF13936HTH_38 1.48
PF13414TPR_11 1.48
PF00589Phage_integrase 1.48
PF12728HTH_17 1.48
PF02371Transposase_20 1.48
PF15631Imm-NTF2-2 1.48
PF04956TrbC 0.74
PF07963N_methyl 0.74
PF06035Peptidase_C93 0.74
PF08031BBE 0.74
PF00664ABC_membrane 0.74
PF00248Aldo_ket_red 0.74
PF01258zf-dskA_traR 0.74
PF02776TPP_enzyme_N 0.74
PF07973tRNA_SAD 0.74
PF02225PA 0.74
PF14534DUF4440 0.74
PF12681Glyoxalase_2 0.74
PF07606DUF1569 0.74
PF02518HATPase_c 0.74
PF01259SAICAR_synt 0.74
PF13531SBP_bac_11 0.74
PF01548DEDD_Tnp_IS110 0.74
PF13249SQHop_cyclase_N 0.74
PF03853YjeF_N 0.74
PF00106adh_short 0.74
PF08238Sel1 0.74
PF00756Esterase 0.74
PF00501AMP-binding 0.74
PF01555N6_N4_Mtase 0.74
PF00440TetR_N 0.74
PF02472ExbD 0.74
PF03781FGE-sulfatase 0.74
PF13646HEAT_2 0.74
PF13581HATPase_c_2 0.74
PF13620CarboxypepD_reg 0.74
PF03544TonB_C 0.74
PF00665rve 0.74
PF14559TPR_19 0.74
PF04264YceI 0.74
PF13431TPR_17 0.74
PF01740STAS 0.74
PF12706Lactamase_B_2 0.74

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 135 Family Scaffolds
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 5.93
COG3547TransposaseMobilome: prophages, transposons [X] 2.22
COG1734RNA polymerase-binding transcription factor DksATranscription [K] 0.74
COG4584TransposaseMobilome: prophages, transposons [X] 0.74
COG3838Type IV secretory pathway, VirB2 component (pilin)Intracellular trafficking, secretion, and vesicular transport [U] 0.74
COG3672Predicted transglutaminase-like proteinPosttranslational modification, protein turnover, chaperones [O] 0.74
COG3316Transposase (or an inactivated derivative), DDE domainMobilome: prophages, transposons [X] 0.74
COG2826Transposase and inactivated derivatives, IS30 familyMobilome: prophages, transposons [X] 0.74
COG2801Transposase InsO and inactivated derivativesMobilome: prophages, transposons [X] 0.74
COG2353Polyisoprenoid-binding periplasmic protein YceIGeneral function prediction only [R] 0.74
COG2189Adenine specific DNA methylase ModReplication, recombination and repair [L] 0.74
COG0062NAD(P)H-hydrate repair enzyme Nnr, NAD(P)H-hydrate epimerase domainNucleotide transport and metabolism [F] 0.74
COG1262Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domainPosttranslational modification, protein turnover, chaperones [O] 0.74
COG1041tRNA G10 N-methylase Trm11Translation, ribosomal structure and biogenesis [J] 0.74
COG0863DNA modification methylaseReplication, recombination and repair [L] 0.74
COG0848Biopolymer transport protein ExbDIntracellular trafficking, secretion, and vesicular transport [U] 0.74
COG0810Periplasmic protein TonB, links inner and outer membranesCell wall/membrane/envelope biogenesis [M] 0.74
COG0277FAD/FMN-containing lactate dehydrogenase/glycolate oxidaseEnergy production and conversion [C] 0.74
COG0152Phosphoribosylaminoimidazole-succinocarboxamide synthaseNucleotide transport and metabolism [F] 0.74


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms59.26 %
UnclassifiedrootN/A40.74 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001082|JGI12664J13189_1006067All Organisms → cellular organisms → Bacteria → Acidobacteria834Open in IMG/M
3300001151|JGI12713J13577_1001041All Organisms → cellular organisms → Bacteria2599Open in IMG/M
3300001175|JGI12649J13570_1002076All Organisms → cellular organisms → Bacteria3077Open in IMG/M
3300001471|JGI12712J15308_10003893All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium4307Open in IMG/M
3300001593|JGI12635J15846_10455030Not Available762Open in IMG/M
3300001593|JGI12635J15846_10651024Not Available610Open in IMG/M
3300002245|JGIcombinedJ26739_100194169All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1919Open in IMG/M
3300004080|Ga0062385_10155677All Organisms → cellular organisms → Bacteria1186Open in IMG/M
3300004082|Ga0062384_100261167Not Available1056Open in IMG/M
3300004082|Ga0062384_100663532All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium714Open in IMG/M
3300004082|Ga0062384_100808546All Organisms → cellular organisms → Bacteria656Open in IMG/M
3300004092|Ga0062389_101042702Not Available1003Open in IMG/M
3300004092|Ga0062389_101799640Not Available792Open in IMG/M
3300004631|Ga0058899_11623154All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium612Open in IMG/M
3300004635|Ga0062388_100173425Not Available1669Open in IMG/M
3300004635|Ga0062388_102427073All Organisms → cellular organisms → Bacteria549Open in IMG/M
3300005174|Ga0066680_10338918Not Available959Open in IMG/M
3300005445|Ga0070708_100679374Not Available970Open in IMG/M
3300005533|Ga0070734_10057534All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2338Open in IMG/M
3300005538|Ga0070731_10482752Not Available825Open in IMG/M
3300005557|Ga0066704_10189261Not Available1389Open in IMG/M
3300005561|Ga0066699_10066446Not Available2278Open in IMG/M
3300005591|Ga0070761_10124334Not Available1499Open in IMG/M
3300005591|Ga0070761_10155173All Organisms → cellular organisms → Bacteria1343Open in IMG/M
3300005602|Ga0070762_10582547All Organisms → cellular organisms → Bacteria → Proteobacteria741Open in IMG/M
3300005610|Ga0070763_10920613Not Available521Open in IMG/M
3300005712|Ga0070764_10592113All Organisms → cellular organisms → Bacteria675Open in IMG/M
3300005712|Ga0070764_11108115All Organisms → cellular organisms → Bacteria → Acidobacteria502Open in IMG/M
3300006173|Ga0070716_100819092Not Available722Open in IMG/M
3300006176|Ga0070765_100022169All Organisms → cellular organisms → Bacteria4777Open in IMG/M
3300006176|Ga0070765_100473649All Organisms → cellular organisms → Bacteria → Acidobacteria1175Open in IMG/M
3300006176|Ga0070765_100853574Not Available860Open in IMG/M
3300006176|Ga0070765_101285789Not Available690Open in IMG/M
3300006854|Ga0075425_100384427All Organisms → cellular organisms → Bacteria1617Open in IMG/M
3300009162|Ga0075423_10424655All Organisms → cellular organisms → Bacteria → Acidobacteria1396Open in IMG/M
3300009628|Ga0116125_1005167All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3895Open in IMG/M
3300009792|Ga0126374_11655223Not Available531Open in IMG/M
3300010043|Ga0126380_10075710All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.1929Open in IMG/M
3300010043|Ga0126380_10367848Not Available1054Open in IMG/M
3300010048|Ga0126373_10079808All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2979Open in IMG/M
3300010358|Ga0126370_10236342All Organisms → cellular organisms → Bacteria1407Open in IMG/M
3300010358|Ga0126370_10671988Not Available906Open in IMG/M
3300010359|Ga0126376_11729906Not Available661Open in IMG/M
3300010359|Ga0126376_11809471Not Available649Open in IMG/M
3300010360|Ga0126372_11314638Not Available752Open in IMG/M
3300010360|Ga0126372_11997850Not Available626Open in IMG/M
3300010376|Ga0126381_100150071All Organisms → cellular organisms → Bacteria3059Open in IMG/M
3300010379|Ga0136449_100250018All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas3295Open in IMG/M
3300011120|Ga0150983_15557394All Organisms → cellular organisms → Bacteria1216Open in IMG/M
3300012918|Ga0137396_10437611All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium969Open in IMG/M
3300012929|Ga0137404_10578549Not Available1008Open in IMG/M
3300012948|Ga0126375_11279814All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium615Open in IMG/M
3300012948|Ga0126375_11778859All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium537Open in IMG/M
3300014169|Ga0181531_10030997All Organisms → cellular organisms → Bacteria → Acidobacteria3085Open in IMG/M
3300014169|Ga0181531_10354085Not Available901Open in IMG/M
3300014489|Ga0182018_10155334All Organisms → cellular organisms → Bacteria1305Open in IMG/M
3300016445|Ga0182038_10299823All Organisms → cellular organisms → Bacteria → Acidobacteria1313Open in IMG/M
3300017942|Ga0187808_10369615Not Available653Open in IMG/M
3300020579|Ga0210407_10565170Not Available887Open in IMG/M
3300020580|Ga0210403_10003285All Organisms → cellular organisms → Bacteria14308Open in IMG/M
3300020581|Ga0210399_10191386Not Available1700Open in IMG/M
3300020583|Ga0210401_10004651All Organisms → cellular organisms → Bacteria14327Open in IMG/M
3300020583|Ga0210401_10031217All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium5074Open in IMG/M
3300020583|Ga0210401_10241967Not Available1663Open in IMG/M
3300021088|Ga0210404_10212747Not Available1040Open in IMG/M
3300021168|Ga0210406_10373819Not Available1146Open in IMG/M
3300021168|Ga0210406_10833176All Organisms → cellular organisms → Bacteria699Open in IMG/M
3300021168|Ga0210406_11053661Not Available602Open in IMG/M
3300021170|Ga0210400_10001265All Organisms → cellular organisms → Bacteria25326Open in IMG/M
3300021170|Ga0210400_10022973All Organisms → cellular organisms → Bacteria4852Open in IMG/M
3300021170|Ga0210400_10632900Not Available881Open in IMG/M
3300021171|Ga0210405_10030474All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium4325Open in IMG/M
3300021171|Ga0210405_11004164Not Available629Open in IMG/M
3300021180|Ga0210396_10540064All Organisms → Viruses → Predicted Viral1017Open in IMG/M
3300021181|Ga0210388_10207347All Organisms → cellular organisms → Bacteria1715Open in IMG/M
3300021181|Ga0210388_10400063Not Available1207Open in IMG/M
3300021181|Ga0210388_10582959Not Available979Open in IMG/M
3300021181|Ga0210388_11637065Not Available534Open in IMG/M
3300021402|Ga0210385_10016083All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium4658Open in IMG/M
3300021402|Ga0210385_10348180All Organisms → cellular organisms → Bacteria → Acidobacteria1106Open in IMG/M
3300021420|Ga0210394_10003611All Organisms → cellular organisms → Bacteria → Acidobacteria19079Open in IMG/M
3300021433|Ga0210391_10045523All Organisms → cellular organisms → Bacteria3497Open in IMG/M
3300021474|Ga0210390_10441201Not Available1099Open in IMG/M
3300021475|Ga0210392_10399435All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1001Open in IMG/M
3300021477|Ga0210398_10139518All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1971Open in IMG/M
3300021477|Ga0210398_11062609Not Available644Open in IMG/M
3300022504|Ga0242642_1025276Not Available832Open in IMG/M
3300022722|Ga0242657_1213045Not Available539Open in IMG/M
3300022733|Ga0224562_1000473All Organisms → cellular organisms → Bacteria → Acidobacteria2445Open in IMG/M
3300024271|Ga0224564_1042921Not Available872Open in IMG/M
3300024271|Ga0224564_1137913Not Available503Open in IMG/M
3300025910|Ga0207684_10310719Not Available1359Open in IMG/M
3300026374|Ga0257146_1065418Not Available590Open in IMG/M
3300026498|Ga0257156_1133143All Organisms → cellular organisms → Bacteria → Acidobacteria518Open in IMG/M
3300027370|Ga0209010_1000176All Organisms → cellular organisms → Bacteria24374Open in IMG/M
3300027505|Ga0209218_1034988Not Available987Open in IMG/M
3300027545|Ga0209008_1005424Not Available3032Open in IMG/M
3300027545|Ga0209008_1027325All Organisms → cellular organisms → Bacteria1330Open in IMG/M
3300027567|Ga0209115_1038343All Organisms → cellular organisms → Bacteria → Acidobacteria1087Open in IMG/M
3300027609|Ga0209221_1044278All Organisms → cellular organisms → Bacteria → Acidobacteria1182Open in IMG/M
3300027676|Ga0209333_1058788All Organisms → cellular organisms → Bacteria → Acidobacteria1058Open in IMG/M
3300027795|Ga0209139_10017916All Organisms → cellular organisms → Bacteria2569Open in IMG/M
3300027826|Ga0209060_10204819All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium908Open in IMG/M
3300027853|Ga0209274_10261761Not Available886Open in IMG/M
3300027884|Ga0209275_10399051All Organisms → cellular organisms → Bacteria → Proteobacteria776Open in IMG/M
3300027895|Ga0209624_10331989Not Available1013Open in IMG/M
3300027908|Ga0209006_10000040All Organisms → cellular organisms → Bacteria → Acidobacteria123317Open in IMG/M
3300027908|Ga0209006_10156820All Organisms → cellular organisms → Bacteria1996Open in IMG/M
3300028047|Ga0209526_10197876All Organisms → cellular organisms → Bacteria1393Open in IMG/M
3300028731|Ga0302301_1010404All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2911Open in IMG/M
3300028871|Ga0302230_10046223All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1860Open in IMG/M
3300028906|Ga0308309_10042859All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3207Open in IMG/M
3300028906|Ga0308309_11062473Not Available700Open in IMG/M
3300030007|Ga0311338_10489845All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1292Open in IMG/M
3300030741|Ga0265459_13077462Not Available582Open in IMG/M
3300031090|Ga0265760_10007176All Organisms → cellular organisms → Bacteria3193Open in IMG/M
3300031708|Ga0310686_100173422All Organisms → cellular organisms → Bacteria6753Open in IMG/M
3300031708|Ga0310686_106701113All Organisms → cellular organisms → Bacteria2079Open in IMG/M
3300031708|Ga0310686_108970969Not Available508Open in IMG/M
3300031708|Ga0310686_114694732All Organisms → cellular organisms → Bacteria → Acidobacteria2617Open in IMG/M
3300031715|Ga0307476_10372275Not Available1053Open in IMG/M
3300031718|Ga0307474_10565621All Organisms → cellular organisms → Bacteria894Open in IMG/M
3300031718|Ga0307474_10942076Not Available683Open in IMG/M
3300031718|Ga0307474_11031570All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345651Open in IMG/M
3300031753|Ga0307477_10002217All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae15224Open in IMG/M
3300031754|Ga0307475_10117805All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2088Open in IMG/M
3300031754|Ga0307475_10170417All Organisms → cellular organisms → Bacteria → Acidobacteria1735Open in IMG/M
3300031754|Ga0307475_11183702Not Available596Open in IMG/M
3300031823|Ga0307478_10504691All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin3451008Open in IMG/M
3300031954|Ga0306926_10581733All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1369Open in IMG/M
3300032828|Ga0335080_10119166All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2929Open in IMG/M
3300032828|Ga0335080_10321829All Organisms → cellular organisms → Bacteria1674Open in IMG/M
3300033158|Ga0335077_10097847All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB3 → candidate division KSB3 bacterium3448Open in IMG/M
3300033158|Ga0335077_10127716All Organisms → cellular organisms → Bacteria2946Open in IMG/M
3300034163|Ga0370515_0010751All Organisms → cellular organisms → Bacteria4347Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil24.44%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil14.81%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil10.37%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil9.63%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil6.67%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil6.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.93%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil2.22%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.22%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.22%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa2.22%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil2.96%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog1.48%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil1.48%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.48%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.48%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland0.74%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.74%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil0.74%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.74%
PalsaEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa0.74%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001082Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3EnvironmentalOpen in IMG/M
3300001151Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3EnvironmentalOpen in IMG/M
3300001175Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3EnvironmentalOpen in IMG/M
3300001471Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2EnvironmentalOpen in IMG/M
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300004080Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300004082Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004631Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004635Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005533Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1EnvironmentalOpen in IMG/M
3300005538Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005591Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005712Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009628Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10EnvironmentalOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300014169Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaGEnvironmentalOpen in IMG/M
3300014489Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaGEnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300017942Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021433Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-OEnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300021475Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-OEnvironmentalOpen in IMG/M
3300021477Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-OEnvironmentalOpen in IMG/M
3300022504Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022722Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022733Soil microbial communities from Bohemian Forest, Czech Republic ? CSU3EnvironmentalOpen in IMG/M
3300024271Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026374Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-AEnvironmentalOpen in IMG/M
3300026498Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-AEnvironmentalOpen in IMG/M
3300027370Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3 (SPAdes)EnvironmentalOpen in IMG/M
3300027505Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O3 (SPAdes)EnvironmentalOpen in IMG/M
3300027545Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)EnvironmentalOpen in IMG/M
3300027567Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027609Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027676Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)EnvironmentalOpen in IMG/M
3300027795Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300027826Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027853Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)EnvironmentalOpen in IMG/M
3300027884Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)EnvironmentalOpen in IMG/M
3300027895Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028731Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_2EnvironmentalOpen in IMG/M
3300028871Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_1EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300030007I_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300030741Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assemblyEnvironmentalOpen in IMG/M
3300031090Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M
3300034163Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12664J13189_100606723300001082Forest SoilMTLPFGVEESIIPGVLASRGIPVHVSERYLARQGRYVEIQVPASRLDDARRALDEAKRVGGQLKTGNED*
JGI12713J13577_100104143300001151Forest SoilMSNREELVVFMTLPRGVDESIIPGVLASRGITVYLSERYLGHLGQYVEIQVPASRLEDARRALEDAKRVGEQMKSESEE*
JGI12649J13570_100207643300001175Forest SoilMRADSVSRGQDDQEELVVFMTLPFGVEESIIPGVLASRGIPVHVSERYLARQGRYVEIQVPASRLDDARRALDEAKRVGGQLKTGNED*
JGI12712J15308_1000389353300001471Forest SoilMSDQEELVVFMTLPFGVEESIIPGVLASRGIPVHLSERFLARQGRYVEIQVPASRLEDARQALDDAKRVGEQLETGNEG*
JGI12635J15846_1045503013300001593Forest SoilMSHQEELVVFMTLPFGVDESIIPGVLASRGIPVHLSERYLARQGRYVESQVPASRLEDTRRALDDARRVG
JGI12635J15846_1065102413300001593Forest SoilMPNQEEFVVFMTLPFGVEESIIPGVLASRGIPVQVSERYLARQGRYVEIQVPASRLDDARRALDAAKRVGGQLKTGCED*
JGIcombinedJ26739_10019416913300002245Forest SoilMSNPEELVVFMTLPLGVDESIIPGVLASRGIPVHLSERRLARQGRYVEIQVPVSRLEDARRALEDAKRVGEQLKAENED*
Ga0062385_1015567713300004080Bog Forest SoilMPDHEQLVVFMTLPFGVEESIIPGVLASRGIPVHLSERFLARQGRYVEIQVPASRLADARQALDDAKRVGKQLHNSGNAAN
Ga0062384_10026116723300004082Bog Forest SoilLVVFMTLPFGVEESIIPGVLASRGIPVHLSERFLARQGRYVEIQVPASRLADARQALDDAKRVGKQLHISGNAANQDFKG*
Ga0062384_10066353213300004082Bog Forest SoilMRSPGTDPFADGPIRRYPYPEANLANPDELVLFMTLPVGVNELIIPGVLTSRDIPVHLTERFFARQGRYVEIRVPASRLEDARRALDDAKRVGENLDSGTEV*
Ga0062384_10080854623300004082Bog Forest SoilMPDHEALVVFMTLPFGVEESIIPGVLASRGIPVHLSERFLARQGRYVEIQVPASRLADARQALDDAKRVGKQLETGNEN*
Ga0062389_10104270213300004092Bog Forest SoilMSNPEELVVFMTLPVGVDESIIPGVLASRGIPVHLSERYLARQGRYVEIQVPASRLEDARRALDGAKRVGEQIKSGSEV*
Ga0062389_10179964013300004092Bog Forest SoilMSNQEELVVFMTLPLGVDESIIPGVLASRGIPVHLSERYLARQGRYVEIQVPASRLEDARRALDDAKRVGDQLKTGNKG*
Ga0058899_1162315423300004631Forest SoilVIPDPEELVVFMKLERGVETALIPGVLASRDIPVVLSEQHPAHQRWHVEIKVPASRIEEARRALEDAKQFGDLMDQETDD*
Ga0062388_10017342523300004635Bog Forest SoilFMTLPFGVEESIIPGVLASRGIPVHLSERFLARQGRYVEIQVPASRLADARQALDDAKRVGKQLHISGNAANQDFKG*
Ga0062388_10242707323300004635Bog Forest SoilRTGDALGDVFGDYTLILRPEAKMPDHEALVVFMTLPFGVEESIIPGVLASRGIPVHLSERFLARQGRYVEIQVPASRLADARQALDDAKRVGKQLETGNEN*
Ga0066680_1033891823300005174SoilLPDSDELVIFMTLPVGVDELIIPGVLASRDIPVHLTERYFARQGRYVEIRVPASRLEDARRALDDAKRVGEKLDSGTEV*
Ga0070708_10067937413300005445Corn, Switchgrass And Miscanthus RhizosphereMSNPEELVIFMTLPVGVDELIIPGVLASRDIPVHLTERYFARQGRYVEIRVPASRLEDARRALDDAKRVGETLDSGTEV*
Ga0070734_1005753423300005533Surface SoilMSNSEEFVAFMTLPFGIEESIIPGVLASRGIPIQLQERYLARQGRYVVIQVPRSRLEDAKRALDDAKQVGDQMESEDKNNSPTEG*
Ga0070731_1048275223300005538Surface SoilMSDHRREDNMPNPDELVVFMALPVGVDESIIPGVLASRGIPFKLLERFLARQGRYVEILVPASRLQDARNVLDEAKQVGEQLKSGNED*
Ga0066704_1018926123300005557SoilLPDSDELVIFMTLPVGVDELIIPGVLASRDIPVHLTERYFARQGRYVEIRVPASRLEDARRALDDAKWVGENLDSGTEV*
Ga0066699_1006644633300005561SoilMADSNELVVFMTLPRGVEEAIIPGVLASRNVPFVLVDRYLAHQGQYVEVQVPASRLKDARQALADAKKVGRVLNF*
Ga0070761_1012433413300005591SoilMPNPDELVVFMTLPVGVDESIIPGVLASRGIPFELSERYLARQGRYVEIQVPASRLEDARKALDDAKQVGKQLKAESEG*
Ga0070761_1015517333300005591SoilMPNSEELVVFMTLPRGVDESIIPGVLASRGIPVYLSERYLAHLGRYVEIQVPASRLEDARRALDDAKRVGEQMNSESEG*
Ga0070762_1058254723300005602SoilIPRLKANMSNSEELVVFMTLPRGVDESIIPGVLAGRGIPVYLSERYLGHLGQYVEIQVPASRLEDARRALEDAKLVGEQMKSGSEE*
Ga0070763_1092061313300005610SoilMSNEEELVVFMTLPLGVEESIIPGVLASRGIPVHLSERYLARQGRYVEIQVPASRLEDARRALDDAKRVGEQLETGNEDGCRALRHNDANELLLQPTKT*
Ga0070764_1059211323300005712SoilVDTSAHLSGNPKSILRYAISFSLRRIPRLKANMSNSEELVVFMTLPRGVDESIIPGVLASRGIPVYLSERYLGHLGQYVEIQVPASRLEDARRALEDAKLVGEQMKSGSEE*
Ga0070764_1110811513300005712SoilFGVEESIIPGVLASRGIPVQVSERYLARQGRYVEIQVPASRLDDARRALEDAKRVGGQLKTGGED*
Ga0070716_10081909213300006173Corn, Switchgrass And Miscanthus RhizosphereMADSNELVVFMTLPRGVEEAIIPGVLASRNVPFVLVDRYLAHQGQYVEVQVPASRLKDARQALADAKKVGKVLNF*
Ga0070765_10002216973300006176SoilMSNPDELVVFMTLPVGVDESIIPGVLASRGIPFKLSERYLARQGRYVEIQVPASRLEDARQALDDAKRVGEQLKSESED*
Ga0070765_10047364923300006176SoilMSKQEELVVFMTLPFGVEESIIPGVLASRGIPVQVSERYLARQGRYVEIQVPASRLDDARRALEDAKRVGGQLKTGGED*
Ga0070765_10085357423300006176SoilMSNQEELVVFMTLPLGVEESIIPGVLASRGIPVHLSERYLARQGRYVEIQVPASRLEDARRALDDAERVGEQLETGNQD*
Ga0070765_10128578913300006176SoilVEIRTLIPCSEANMSNPEELVVFMTLPVGADESIIPGVLASRGIPVHLSERRLARQGRNVEIQVPASRLEDARRALDDAKWVGEQLKAEYEG*
Ga0075425_10038442733300006854Populus RhizosphereMQDQSCCILVQTADPDELVIFMTLPVGVDELIIPGVLASRDIPVHLTERYLARQGRYVEIRVPASRLEDAKRALADAKRVGENLDSSTEV*
Ga0075423_1042465523300009162Populus RhizosphereLADPDELVIFMTLPVGVDELIIPGVLASRDIPVHLTERYLARQGRYVEIRVPASRLEDAKRALADAKRVGENLDSSTEV*
Ga0116125_100516753300009628PeatlandMSNSEEFTAFMTLPFGVEQSIIPGVLASRGIPFRLFERFLAHQGRSLEIQVPASRLDDARQALNDAKQVGEQLHPESEV*
Ga0126374_1165522323300009792Tropical Forest SoilMSNPDELVHFMTLRGVDALIIPGVLESRDIPVHLTERYFARQGRSLEIRIPASRVEDAKRALDDAKRVGEQLDSTTEV*
Ga0126380_1007571033300010043Tropical Forest SoilMSNPDELVLFMTLRGVDALIIPGVLESRDIPVHLTERYFARQGRSLEIRVPASRVEDAKRALDDARRVGEQLNSTTEV*
Ga0126380_1036784823300010043Tropical Forest SoilMSNPDELVIFMTLPVGVDELIIPGVLASRDIPVHLTERYFARQGRYLEIRVPASRLENARRRALDDAKRVGENLDPGTEV*
Ga0126373_1007980813300010048Tropical Forest SoilMTLPVGIDELIIPGVLSSRDIPVHLTERYFARQGRYLEIRVPASRLEDARRALDDAKLVGENLDSSTQV*
Ga0126370_1023634223300010358Tropical Forest SoilMANPDELVLFMTLRGVDALIIPGVLASRDIPVHLTERYFARQGRSLEIRVPTSRLEDAKRALDDAKRVGEKLDSNAEV*
Ga0126370_1067198823300010358Tropical Forest SoilMSNQDELVILMTLPVGVDELIIPGVLASRDIPVHLTERYFARQGRYLEIRVPASRLEDARRALDDAKRVVENLDPGTEV*
Ga0126376_1172990613300010359Tropical Forest SoilMSNPDELVIFMTLPVGVDELIIPGVLASRDIPVHLTERYFARQGRYLEIRVPASRLQDARRALNDAKRVGENLDPGTEV*
Ga0126376_1180947123300010359Tropical Forest SoilMSKPDELVLFMTARGVDELIIPGVLESRDIPIHLTERYFARQGRSLEIRVPASRVEDAKRALDDAKRVGEKLDPDTEV*
Ga0126372_1131463823300010360Tropical Forest SoilMSNPEEFVIFMTLPFGIDESIIPGVLTSRGIPVYLSERFLAHQGRYVEIRIPASRLEDARRALDDAKRAGENLNSESEV*
Ga0126372_1199785023300010360Tropical Forest SoilMKKYMGNSEELVVFMTLPLGVDESIIPGVLASRGIPVYLSERYLARQGRYVEIRVPASRLEDARRALDDAKRVGERLKPGPED*
Ga0126381_10015007133300010376Tropical Forest SoilMFKPDELVLFMTLRGGDALIIPGVLTSRDIPIHLTERYFARQGRSLEIRVPASRIEDAKRALEDAKQVGEQLDSTTEV*
Ga0136449_10025001833300010379Peatlands SoilMSNPEELVVFMTLPFGVEESIIPGVLRSRGIPVSLSERYLARLGRYVEIRVPASRVEDARRALDDAKRVGEQLESEGEG*
Ga0150983_1555739413300011120Forest SoilMSDQEELVVFMTLPLGVEESIIPGVLASRGIPVHLSERYLARQGRYVEIQVPASRLEDARQALDDARRVGEQLETGNEG*
Ga0137396_1043761113300012918Vadose Zone SoilMSNPEELVIFMTLPFGVDESIIPGVLTSRGIPVYLCERFLAHQGRYVEIRVPASRLEDARRALDDAKRVGENLNSESEV*
Ga0137404_1057854923300012929Vadose Zone SoilLANPDELVIFMTLPVGVNELIIPGVLASRDIPVHLTERYFARQGRYVEIRVPASRLEDARRALDDAKRVGENLDSGTEV*
Ga0126375_1127981423300012948Tropical Forest SoilMSNPDELVIFMTLPVGVDELIIPGVLASRDIPVHLTERYFARQGRYLEIRVPASRLENARRRALDDAKRVGENLDPGTEVL
Ga0126375_1177885923300012948Tropical Forest SoilVIFMTLPVGVDELIIPSVLASRDIPVHLTERYFARQGRYLEIRVPASRLEDVRRALDDAKRVGENLDPGTEVLMWRSAWETALSPT*
Ga0181531_1003099763300014169BogEQSIIPGVLASRGIPFRLFERFLAHQGRSLEIQVPASRLDDARQALNDAKQVGEQLHPESEV*
Ga0181531_1035408523300014169BogMPDSEELVVFMKLKFGVEETVIPGVLASRGIPVVLSEHHPARQRRYAELKIPASRLDEARCALEDAKRLGELMDDETHE*
Ga0182018_1015533433300014489PalsaMTLPFGVEESIIPGVLASRGIPVHVSERYLARQGRYVEIQVPASRLDDARRALDEAKRVGGQLKTGN
Ga0182038_1029982323300016445SoilMSNPDELVIFMTLPVGVDELTIPGVFASRDIPVHLTERYFARQGRYLEIRVPASRLEDARRALDDAKRVGENLAPGSGV
Ga0187808_1036961513300017942Freshwater SedimentMSNQEELFAFMTLPLGVDESIIPGVLASGGIPVYLSERYLARQGRYVEFQVPASRLEDARRALDDAKRVGEQLKSGTED
Ga0210407_1056517013300020579SoilMADSNELVVFMTLPRGVEEAIIPGVLASRNVPFVLVDRYLAHQGQYVEVQVPASRLKDARQALADAKKVGKVLNF
Ga0210403_10003285143300020580SoilMSNREELVVFMTLPLGVEESIIPGVLASRGIPVHLSERYLARQGRYVEIQVPASRLEDARQALDDAKRVGEQLETGNEG
Ga0210399_1019138633300020581SoilMSNREELVVFMTLPLGVEESIIPGVLASRGIPVHLSERYLARQGRYVEIQVPASRLEDARQALDDAKRVGEQLETGDEG
Ga0210401_1000465193300020583SoilMSNQEELVVFMTLPFGVDESIIPGVLASRGIPVHLSERYLARQGRYVEIQVPASRLEDAWRALDDAKRVGEQL
Ga0210401_1003121733300020583SoilMTLPLGVEESIIPGVLASRGIPVHLSERYLARQGRYVEIQVPASRLDDARQALDDAKRVGEQLETGDEG
Ga0210401_1024196733300020583SoilLPDSDELVIFMTLPVGVDELIIPGVLASRDIPVHLTERYFARQGRYVEIRVPASRLEDARRALDDAKRVGEKLDSGTEV
Ga0210404_1021274713300021088SoilMPNPDELVVFMTLPVGVDESIIPGVLASRGIPFNLSERFLARQGRYVEIQVPASRLEDARQALDDAKRVGEQLK
Ga0210406_1037381933300021168SoilMSDQEELVVFMTLPFGVEESIIPGVLASRGIPVHLSERYLARQGRYVEIQVPASRLEDARQALDD
Ga0210406_1083317613300021168SoilMTLPLGVEESIIPGVLASRGIPVHLSERYLARQGRYVEIQVPASRLEDARQALDDAKRVGEQLETGDEG
Ga0210406_1105366113300021168SoilMSNPEELVVFMTLPLGVDESIIPGVLASRGIPVHLSERRLARQGRYVEIQVPVSRLEDARRALEDAKRVGEQLKAENED
Ga0210400_10001265103300021170SoilMSNPEELIIFMTLPFGVDESIIPGVLTSRGIPVYLSERFLAHQGRYVEIRVPASRLEDARRALDDAKWVGENLNSESEV
Ga0210400_1002297313300021170SoilMPDSEELVVFMTLERGVQEMLIPGVLVSRGIPFVLFDQHPARQRWYVEIKVPASRLEDARRALEDAKQFGESWTGKGMSRRCNVSR
Ga0210400_1063290013300021170SoilMSDQEELVVFMTLPFGVEESIIPGVLASRGIPVHLSERYLARQGRYVEIQVPASRLEDARQALDDAKRVGAQLETGNEG
Ga0210405_1003047453300021171SoilVIRGNLYPEADLANPDELVIFMTLPVGVDELIIPGVLASRDIPVHLTERYLARQGRYVEIRVPASRLEDARRALDDAKRVGENLDSNTEV
Ga0210405_1100416413300021171SoilMPNPEELVTFMTLPYGVEEAIIPGVLASRDIPFFLFENHPAKQPWYVEIKVPASRLEDARRALADAKQIGELLDQKGNEI
Ga0210396_1054006423300021180SoilMSNQEELVVFMTLPFGVDESIIPGVLASRGIPVHLSERYLARQGRYVEIQVPASRLEDAWRALDDAKRVG
Ga0210388_1020734733300021181SoilVFMTLPFGVEESIIPGVLASRGIPVQVSERYLARQGRYVEIQVPASRLDDARRALEDAKRVGGQLKTGGED
Ga0210388_1040006323300021181SoilMSNQEELVVFMTLPFGVEESIIPGVLASRGIPVQVSERYLARQGRYVEIQVPASRLDDARRALDDAKRIGGQLKTGNED
Ga0210388_1058295923300021181SoilMHDSEEFVVFMTLEFGVDETVIPGVLASRGIPVFLTERYVARQRRYVEIKVPAARMEDARRALGRCKTSWGPHRSGT
Ga0210388_1163706513300021181SoilMSHPDELVVFMTLPVGVDESIIPGVLASRGIPFKLSERYLARRGRYVEILVPASRLQDARNALDEAKQVGEELKSGNED
Ga0210385_1001608313300021402SoilMPNPDELVVFMTLPVGVDESIIPGVLASRGIPFNLSERFLARQGRYVEIQVPASRLEDARQALDDAKRVGEQLKSGSEG
Ga0210385_1034818023300021402SoilMSKQEELVVFMTLPFGVEESIIPGVLASRGIPVQVSERYLARQGRYVEIQVPASRLDDARRALEDAKRVGGQLTTGGED
Ga0210394_1000361173300021420SoilLSNSDELVLFMTLPVGVDELIVPGVLASRDIPVHLTERYFARQGRYVEIRVPASRLEDARRALDDAKLVGEKLDSDTEV
Ga0210391_1004552343300021433SoilMSKQEELVVFMTLPFGVEESIIPGVLASRGIPVQVSERYLARQGRYVEIQVPASRLDDARRALEDAKRVGGQLKTGGED
Ga0210390_1044120123300021474SoilMTLPRGVEEAIIPGVLASRNVPFVLVDRYLAHQGQYVEVQVPASRLKDARQALADAKKVGKVLNF
Ga0210392_1039943513300021475SoilMSNPEELVVCMTLPVGADESIIPGVLASRGIPVHLSERRLARQGRNVEIQVPASRLEDARRALDDAKWVGEQLKAEYEG
Ga0210398_1013951843300021477SoilMSNSEELVVFMTLPRGVDESIIPGVLAGRGIPVYLSERYLGHLGQYVEIQVPASRLEDARRALEDAKLV
Ga0210398_1106260923300021477SoilMSKQEELVVFMTLPFGVEESIIPGVLASRGIPVQVSERYLARQGRYVEIQVPASRLDDARRALEDAKRVGGQLKTGGE
Ga0242642_102527623300022504SoilMADSNELVVFMTLPRGVEEAIIPGVLASRNVPFVLVDRYLAHQGQCVEVQVPASRLKDARQALADAKKVGKVLNF
Ga0242657_121304513300022722SoilMADSNELVVFMTLPRGVEEAIIPGVLASRSVPFVLVDRYLAHQGQYVEVQVPASRLKDARQALADAKKVGKVLNF
Ga0224562_100047323300022733SoilMSNQDELVVFMALPFGVEESIIPGVLASRGIPVHLSERYLARQGRYVEIQIPASRLEDARQALDDAKRVGKQLETGNEGRRGTLRHD
Ga0224564_104292113300024271SoilMSNQDELVVFMTLPFGVEESIIPGVLASRGIPVHLSERYLARQGRYVEIQIPASRLEDARQALDDAKRVGKQLETGNEGRRGTLRHD
Ga0224564_113791313300024271SoilMSNQEELVVFMTLPLGVEESIIPGVLASRGIPVHLSERYLARQGRYVEIQVPASRLEDARRALDDAERVGEQLETGNQD
Ga0207684_1031071923300025910Corn, Switchgrass And Miscanthus RhizosphereMSNPEELVIFMTLPVGVDELIIPGVLASRDIPVHLTERYFARQGRYVEIRVPASRLEDARRALDDAKRVGETLDSGTEV
Ga0257146_106541813300026374SoilMSNPDELVLFMTLRQGVDVLIIPGVLASRDIPVHLTERYFARQGRYLEIRVPASRLEDARRALDEAKKVGESLSSDTEV
Ga0257156_113314313300026498SoilSVAKHSAMSNPDELVLFMTLRQGVDVLIIPGVLASRDIPVHLTERYFARQGRYLEIRVPASRLEDARRALDEAKKVGESLSSDTEV
Ga0209010_1000176103300027370Forest SoilMTLPFGVEESIIPGVLASRGIPVHVSERYLARQGRYVEIQVPASRLDDARRALDEAKRVGGQLKTGNED
Ga0209218_103498823300027505Forest SoilMSNQEELVVFMTLPFGVEESIIPGVLASRGIPVQVSERYLARQGRYVEIQVPASRLEDARRALDDAKWVGEQLKAEYEG
Ga0209008_100542453300027545Forest SoilMPNPDELVVFMTLPLGVDESIIPGVLASRGIPFDLSERFLARQGRYVEIKVPASRLEDARRALDDAKQVGEQLNSRSED
Ga0209008_102732523300027545Forest SoilMSDQEQLVVFMTLPLGVEESIIPGVLASRGIPVQVSERYLARQGRYVEIQVPASRLDDARRALDDAKRIGGQLKTGNED
Ga0209115_103834323300027567Forest SoilMSNQEELVVFMTLPFGVEESIIPGVLASRGIPVQVSERYLARQGRYVEIQVPASRLDDARRALEDAKRVGGQLKTGGED
Ga0209221_104427823300027609Forest SoilMSHQEELVVFMTLPFGVDESIIPGVLASRGIPVHLSERYLARQGRYVEIQVPASRLDDARRALDAAKRVGGQLKTGCED
Ga0209333_105878813300027676Forest SoilMPNQEEFVVFMTLPFGVEESIIPGVLASRGIPVQVSERYLARQGRYVEIQVPASRLDDARRALDAAKRVGGQLKTGCED
Ga0209139_1001791623300027795Bog Forest SoilMLDHEQLVVFMTLPFGVEESIIPGVLASRGIPVHLSERFLARQGRYVEIQVPASRLADARQALDDAKRVGKQLHNSGNAANHDFKG
Ga0209060_1020481923300027826Surface SoilMSNSEEFVAFMTLPFGIEESIIPGVLASRGIPIQLQERYLARQGRYVVIQVPRSRLEDAKRALDDAKQVGDQMESEDKNNSPTEG
Ga0209274_1026176123300027853SoilMPNPDELVVFMTLPVGVDESIIPGVLASRGIPFELSERYLARQGRYVEIQVPASRLEDARKALDDAKQVGKQLKAESEG
Ga0209275_1039905123300027884SoilAISFSLRRIPRLKANMSNSEELVVFMTLPRGVDESIIPGVLAGRGIPVYLSERYLGHLGQYVEIQVPASRLEDARRALEDAKLVGEQMKSGSEE
Ga0209624_1033198923300027895Forest SoilMSNREELVVFMTLPFGVEESIIPGVLASRGIPVQVSERYLARQGRYVEIQVPASRLDDARRALDDAKRDW
Ga0209006_1000004023300027908Forest SoilMSDQEELVVFMTLPFGVEESIIPGVLASRGIPVHLSERFLARQGRYVEIQVPASRLEDARQALDDAKRVGEQLETGNEG
Ga0209006_1015682033300027908Forest SoilVIPDSEELAVFMKLERGVEETLIPGVLTSRGIPVVLSEQHPARQPWYVEIKVPASRLEDARRALEDAKQVGKLMDQETDE
Ga0209526_1019787613300028047Forest SoilMSDSNELVILMTLPVGVDEAVIPGVLASRGIPVFLSERYLARQGRYVEVQVPASRLEDARRALDDAKTVGEQLKLENED
Ga0302301_101040463300028731PalsaMSNPEELVVFMTLPVGIDETIIPGVLASRGIPVHLSERHLARQGRYVEIQVPASRLEDARRALEDAKRVGEQLKAENED
Ga0302230_1004622313300028871PalsaMSNPEELVVFMTLPVGIDETIIPGVLASRGIPVHLSERHLARQGRYVEIQVPASRLEDARRALEDAKRVGEQLKAE
Ga0308309_1004285933300028906SoilMSNPDELVVFMTLPVGVDESIIPGVLASRGIPFKLSERYLARQGRYVEIQVPASRLEDARQALDDAKRVGEQLKSESED
Ga0308309_1106247313300028906SoilMSKQEELVVFMTLPFGVEESIIPGVLASRGIPVQVSERYLARQGRYVEIQVPASRLDDARRALEDAK
Ga0311338_1048984533300030007PalsaMSNPEELVVFMTLPFGVDESIIPGVLASRGIPVHLSERRLARQGRYVEIQVPASRLEDARQALDDAKRVGE
Ga0265459_1307746213300030741SoilMSNQEELVVFMTLPFGVEESIIPGVLASRGIPVQVSERYLARQGRYVEIQVPASRLDDARRALDDAKESKKK
Ga0265760_1000717653300031090SoilMSNPDELVVFMTFPVGVDESIIPGVLASRGIPFNLSERYLARQGRYVEILVPASRLEDARKALDEAKQVGKQLRSGSEG
Ga0310686_10017342223300031708SoilMTLPFGVEESIIPGVLASRGIPVHLSERYLARQGRYVEIQIPASRLEDARQALDDAKRVGKQLETGNEGRRGTLRHD
Ga0310686_10670111323300031708SoilMSNQREFVVFMTLPRGVDESIIPGVLASRGIPVRLSERYLGRQGRYVEILVPASRLDDARRALDDAKGVGELLKSESEG
Ga0310686_10897096913300031708SoilMPDSEEFVVFMTLEFGVDETVIPGVLASRGIPVFLTERYVARQGRYVEIKVPAARMEDARRALGRCKTSWGPHRSGT
Ga0310686_11469473233300031708SoilMSHHEELVVFMTLPLGVEESIIPGVLASRGIPVHLSERYLARQGRYVEIQVPASRLQDARQALDDAKRVGEQLETGKEDRCGTLLEK
Ga0307476_1037227513300031715Hardwood Forest SoilMSGLILCPEANMSDQEELVVFMTLPLGVDESIIPSVLASRGIPVHLSERYLARQGRYVEIQVPASRLQDARRALDDAKQVGEELSTEKED
Ga0307474_1056562113300031718Hardwood Forest SoilMTLPVGVDELIVPGILASRDIPVQLTERYLARQGRYVEIRIPASRVEDAKRALDDAKRVGEDLDSDPEV
Ga0307474_1094207613300031718Hardwood Forest SoilLENSDELVIFMTLPVGVDELIVPGILASRDIPVQLTERYFARQGRYVEIRVPASRLEDAKRALDDAKRVGESLNSDTEV
Ga0307474_1103157013300031718Hardwood Forest SoilELVVFMTLPLGVDESIIPSVLASRGIPVHLSERYLARQGRYVEIQVPASRLEDARRALDDAKQVGEELSTENED
Ga0307477_1000221753300031753Hardwood Forest SoilMSNPDELVVFMTLPVGVDESIIPGVLASRGIPFKLSERYLARQGRYVEIQVPASRLEDARQALVDAKRVGEQLRSESED
Ga0307475_1011780563300031754Hardwood Forest SoilLANPDELVVFMTLPVGVDELIIPGVLASRDIPVHLTERYFARQGRYVEIRVPALRLEDARRALDDAKRVGENLDSGTEV
Ga0307475_1017041723300031754Hardwood Forest SoilMADSNELVVFMTLPRGVEEAIIPGVLASRNVPFVLVDRYLAHQGQYVEVQVPSSRLKDARQALADAKKVGKVLNF
Ga0307475_1118370213300031754Hardwood Forest SoilMSNPDELVVFMTLPVGVDESIIPGVLTSRGIPVYLSERFLAHQGRYVEIRVPASRLEDARRALDDAKQVGEELSTEKED
Ga0307478_1050469123300031823Hardwood Forest SoilMSGLILCPEANMSDQEELVVFMTLPLGVDESIIPSVLASRGIPVHLSERYLARQGRYVEIQVPASRLEDARRALDDAKQVGEELSTEKED
Ga0306926_1058173313300031954SoilMTLSVGVDELIIPGVLVSRDIPVHLTERYFARQGRYLEIRVPTSRLEDARRALDDAKRVGENLDPGTEV
Ga0335080_1011916643300032828SoilMSNEEEFVVFMTLPFGVDESIIPGVLASRGIPVHLSERYLARQGRYVEIQLPASRLEDARRALGDAKRVGEQLEAGNES
Ga0335080_1032182923300032828SoilMSDPEELVLLMTLPFGVEESIIPGVLRSRGIPVFLSEGYLARQGRYVEIRVPASRVEDARRALDDAKRVGKQLESEGER
Ga0335077_1009784733300033158SoilMSNEEELVVFMTLPFGVDESIIPGVLASRGIPFHLSERYLARQGRYVEIQVPASRLEDARRALADAKRVGEQLEAGNES
Ga0335077_1012771613300033158SoilDMSDPEELVLLMTLPFGVEESIIPGVLRSRGIPVFLSERYLGRQGRYVEIRVPASRVEDARRALDDAKREGKQLESEGER
Ga0370515_0010751_3397_36363300034163Untreated Peat SoilMSNQEELVVFMTLPFGVEESIIPGVLVSRGIPVQVSERYLARQGRYVEIQVPASRLDDARRALDDAKRVGGQLKTGNED


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