NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F058371

Metagenome / Metatranscriptome Family F058371

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F058371
Family Type Metagenome / Metatranscriptome
Number of Sequences 135
Average Sequence Length 69 residues
Representative Sequence MEQIELFPHVNDSIRGLASEGPPTETWEFICECPDVTCHALVTLTLVEFDERREALPPAPILATEHD
Number of Associated Samples 112
Number of Associated Scaffolds 135

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 83.48 %
% of genes near scaffold ends (potentially truncated) 21.48 %
% of genes from short scaffolds (< 2000 bps) 72.59 %
Associated GOLD sequencing projects 102
AlphaFold2 3D model prediction Yes
3D model pTM-score0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (59.259 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere
(12.593 % of family members)
Environment Ontology (ENVO) Unclassified
(22.963 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(45.185 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 24.21%    β-sheet: 10.53%    Coil/Unstructured: 65.26%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.43
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 135 Family Scaffolds
PF12802MarR_2 30.37
PF13412HTH_24 12.59
PF02518HATPase_c 5.19
PF04951Peptidase_M55 4.44
PF01434Peptidase_M41 3.70
PF00809Pterin_bind 3.70
PF13489Methyltransf_23 1.48
PF02153PDH_N 1.48
PF13492GAF_3 1.48
PF13280WYL 0.74
PF13185GAF_2 0.74
PF00005ABC_tran 0.74
PF01288HPPK 0.74
PF13560HTH_31 0.74
PF00166Cpn10 0.74
PF02152FolB 0.74
PF08241Methyltransf_11 0.74
PF09851SHOCT 0.74
PF00171Aldedh 0.74
PF02823ATP-synt_DE_N 0.74
PF01828Peptidase_A4 0.74
PF02771Acyl-CoA_dh_N 0.74
PF02652Lactate_perm 0.74
PF00156Pribosyltran 0.74
PF00902TatC 0.74
PF13462Thioredoxin_4 0.74
PF03309Pan_kinase 0.74
PF06224HTH_42 0.74
PF00873ACR_tran 0.74
PF13191AAA_16 0.74
PF00106adh_short 0.74
PF00072Response_reg 0.74

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 135 Family Scaffolds
COG0465ATP-dependent Zn proteasesPosttranslational modification, protein turnover, chaperones [O] 3.70
COG0287Prephenate dehydrogenaseAmino acid transport and metabolism [E] 1.48
COG0014Gamma-glutamyl phosphate reductaseAmino acid transport and metabolism [E] 0.74
COG0234Co-chaperonin GroES (HSP10)Posttranslational modification, protein turnover, chaperones [O] 0.74
COG0355FoF1-type ATP synthase, epsilon subunitEnergy production and conversion [C] 0.74
COG08017,8-dihydro-6-hydroxymethylpterin pyrophosphokinase (folate biosynthesis)Coenzyme transport and metabolism [H] 0.74
COG0805Twin-arginine protein secretion pathway component TatCIntracellular trafficking, secretion, and vesicular transport [U] 0.74
COG1012Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenaseLipid transport and metabolism [I] 0.74
COG1521Pantothenate kinase type IIICoenzyme transport and metabolism [H] 0.74
COG1539Dihydroneopterin aldolaseCoenzyme transport and metabolism [H] 0.74
COG1620L-lactate permeaseEnergy production and conversion [C] 0.74
COG1960Acyl-CoA dehydrogenase related to the alkylation response protein AidBLipid transport and metabolism [I] 0.74
COG3214DNA glycosylase YcaQ, repair of DNA interstrand crosslinksReplication, recombination and repair [L] 0.74
COG4230Delta 1-pyrroline-5-carboxylate dehydrogenaseAmino acid transport and metabolism [E] 0.74


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms59.26 %
UnclassifiedrootN/A40.74 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2124908007|FWIRElOz_GKZ9IRQ02HD1D9Not Available502Open in IMG/M
2170459005|F1BAP7Q02JC24EAll Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria509Open in IMG/M
2170459024|GZRSKLJ01AWXYQAll Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium506Open in IMG/M
2189573004|GZGWRS401DPQNUNot Available515Open in IMG/M
2199352024|deeps_contig34122.21728All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia4850Open in IMG/M
3300002568|C688J35102_119497166Not Available706Open in IMG/M
3300003267|soilL1_10096457All Organisms → cellular organisms → Bacteria1432Open in IMG/M
3300003324|soilH2_10435690All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1029Open in IMG/M
3300004479|Ga0062595_100073809All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1690Open in IMG/M
3300004479|Ga0062595_100359206All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1019Open in IMG/M
3300004479|Ga0062595_100737770All Organisms → cellular organisms → Bacteria798Open in IMG/M
3300004479|Ga0062595_101684587All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Ozemobacteria → Candidatus Ozemobacterales → Candidatus Ozemobacteraceae → Candidatus Ozemobacter → Candidatus Ozemobacter sibiricus596Open in IMG/M
3300005176|Ga0066679_10653046All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Ozemobacteria → Candidatus Ozemobacterales → Candidatus Ozemobacteraceae → Candidatus Ozemobacter → Candidatus Ozemobacter sibiricus685Open in IMG/M
3300005260|Ga0074072_1016830All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2886Open in IMG/M
3300005329|Ga0070683_100323102All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1469Open in IMG/M
3300005337|Ga0070682_100363568All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1083Open in IMG/M
3300005341|Ga0070691_10823068All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium567Open in IMG/M
3300005434|Ga0070709_10030882All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales3219Open in IMG/M
3300005434|Ga0070709_10810353All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales735Open in IMG/M
3300005435|Ga0070714_100144766All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_92136Open in IMG/M
3300005435|Ga0070714_101273674All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium718Open in IMG/M
3300005435|Ga0070714_102421053All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria510Open in IMG/M
3300005436|Ga0070713_102130660Not Available543Open in IMG/M
3300005439|Ga0070711_101313877Not Available628Open in IMG/M
3300005439|Ga0070711_101417482Not Available605Open in IMG/M
3300005458|Ga0070681_10163151All Organisms → cellular organisms → Bacteria2152Open in IMG/M
3300005529|Ga0070741_10012429All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria15380Open in IMG/M
3300005529|Ga0070741_10295292All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1523Open in IMG/M
3300005530|Ga0070679_100491155All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1172Open in IMG/M
3300005535|Ga0070684_101222641Not Available707Open in IMG/M
3300005537|Ga0070730_10730873Not Available626Open in IMG/M
3300005538|Ga0070731_10186130All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1379Open in IMG/M
3300005545|Ga0070695_100001116All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria14717Open in IMG/M
3300005560|Ga0066670_10034880All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2494Open in IMG/M
3300005563|Ga0068855_102584392Not Available504Open in IMG/M
3300005587|Ga0066654_10690794All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Ozemobacteria → Candidatus Ozemobacterales → Candidatus Ozemobacteraceae → Candidatus Ozemobacter → Candidatus Ozemobacter sibiricus571Open in IMG/M
3300005614|Ga0068856_101150882All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria793Open in IMG/M
3300005764|Ga0066903_100808086All Organisms → cellular organisms → Bacteria1678Open in IMG/M
3300005898|Ga0075276_10072097All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales741Open in IMG/M
3300005902|Ga0075273_10072456Not Available654Open in IMG/M
3300006028|Ga0070717_10115193All Organisms → cellular organisms → Bacteria2297Open in IMG/M
3300006028|Ga0070717_11161865Not Available703Open in IMG/M
3300006173|Ga0070716_101535780All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria545Open in IMG/M
3300006173|Ga0070716_101554461Not Available542Open in IMG/M
3300006580|Ga0074049_12177377All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium546Open in IMG/M
3300006800|Ga0066660_10002550All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria8412Open in IMG/M
3300006953|Ga0074063_12938325All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria639Open in IMG/M
3300006954|Ga0079219_10623859All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria796Open in IMG/M
3300009093|Ga0105240_10042640All Organisms → cellular organisms → Bacteria5781Open in IMG/M
3300009177|Ga0105248_10607479Not Available1234Open in IMG/M
3300009545|Ga0105237_10085979All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3135Open in IMG/M
3300009551|Ga0105238_11457649All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium712Open in IMG/M
3300010048|Ga0126373_12611367Not Available563Open in IMG/M
3300010361|Ga0126378_11515409Not Available760Open in IMG/M
3300010366|Ga0126379_10906521All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia984Open in IMG/M
3300010376|Ga0126381_100017273All Organisms → cellular organisms → Bacteria8340Open in IMG/M
3300010396|Ga0134126_10789103All Organisms → cellular organisms → Bacteria1074Open in IMG/M
3300010398|Ga0126383_13268129Not Available529Open in IMG/M
3300010401|Ga0134121_10956053All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium837Open in IMG/M
3300012201|Ga0137365_10760305All Organisms → cellular organisms → Bacteria708Open in IMG/M
3300012208|Ga0137376_10507822Not Available1046Open in IMG/M
3300012948|Ga0126375_11679962All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium550Open in IMG/M
3300012955|Ga0164298_11051893Not Available605Open in IMG/M
3300012958|Ga0164299_10647433Not Available730Open in IMG/M
3300012958|Ga0164299_11593962Not Available514Open in IMG/M
3300012960|Ga0164301_10224981All Organisms → cellular organisms → Bacteria1214Open in IMG/M
3300012960|Ga0164301_11862754All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium507Open in IMG/M
3300012985|Ga0164308_11325938Not Available654Open in IMG/M
3300013104|Ga0157370_10670018All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria948Open in IMG/M
3300013105|Ga0157369_10298176Not Available1677Open in IMG/M
3300014497|Ga0182008_10185825All Organisms → cellular organisms → Bacteria1053Open in IMG/M
3300014969|Ga0157376_11626937Not Available680Open in IMG/M
3300015077|Ga0173483_10649272Not Available588Open in IMG/M
3300015262|Ga0182007_10117755All Organisms → cellular organisms → Bacteria887Open in IMG/M
3300015356|Ga0134073_10045801All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1156Open in IMG/M
3300015372|Ga0132256_102799591Not Available586Open in IMG/M
3300017937|Ga0187809_10146786All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria814Open in IMG/M
3300017937|Ga0187809_10406927All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria519Open in IMG/M
3300017994|Ga0187822_10362116Not Available526Open in IMG/M
3300018433|Ga0066667_12059382Not Available526Open in IMG/M
3300018468|Ga0066662_10117841All Organisms → cellular organisms → Bacteria1929Open in IMG/M
3300020070|Ga0206356_11667900Not Available530Open in IMG/M
3300020076|Ga0206355_1449141Not Available549Open in IMG/M
3300021478|Ga0210402_10451355All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1194Open in IMG/M
3300021560|Ga0126371_12775691All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria594Open in IMG/M
3300022467|Ga0224712_10222115All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria865Open in IMG/M
3300024179|Ga0247695_1022669All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria885Open in IMG/M
3300024187|Ga0247672_1040171All Organisms → cellular organisms → Bacteria767Open in IMG/M
3300024249|Ga0247676_1025813All Organisms → cellular organisms → Bacteria937Open in IMG/M
3300025898|Ga0207692_10454551All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9807Open in IMG/M
3300025906|Ga0207699_10402623All Organisms → cellular organisms → Bacteria975Open in IMG/M
3300025906|Ga0207699_10707712Not Available737Open in IMG/M
3300025914|Ga0207671_10171296Not Available1686Open in IMG/M
3300025924|Ga0207694_11194465All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae644Open in IMG/M
3300025928|Ga0207700_10360353All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1268Open in IMG/M
3300025928|Ga0207700_10721612All Organisms → cellular organisms → Bacteria890Open in IMG/M
3300025939|Ga0207665_10248410All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1314Open in IMG/M
3300026078|Ga0207702_10928728All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria862Open in IMG/M
3300026295|Ga0209234_1023497All Organisms → cellular organisms → Bacteria2336Open in IMG/M
3300027773|Ga0209810_1008210All Organisms → cellular organisms → Bacteria8441Open in IMG/M
3300027857|Ga0209166_10662195Not Available527Open in IMG/M
3300031226|Ga0307497_10445733All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria628Open in IMG/M
3300031231|Ga0170824_125769817All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9848Open in IMG/M
3300031544|Ga0318534_10213168All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1114Open in IMG/M
3300031640|Ga0318555_10271791All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia916Open in IMG/M
3300031682|Ga0318560_10417734Not Available726Open in IMG/M
3300031736|Ga0318501_10097798All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1460Open in IMG/M
3300031938|Ga0308175_100000159All Organisms → cellular organisms → Bacteria52231Open in IMG/M
3300031938|Ga0308175_100032705All Organisms → cellular organisms → Bacteria4320Open in IMG/M
3300031938|Ga0308175_102523851All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium575Open in IMG/M
3300031939|Ga0308174_10538045Not Available960Open in IMG/M
3300031939|Ga0308174_10860636Not Available764Open in IMG/M
3300031996|Ga0308176_11523721All Organisms → cellular organisms → Bacteria712Open in IMG/M
3300032067|Ga0318524_10193464All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1038Open in IMG/M
3300032180|Ga0307471_101416322All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium855Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere12.59%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil8.15%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil7.41%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil7.41%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil5.19%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil5.19%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.70%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere3.70%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere3.70%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment2.22%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.22%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere2.22%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.22%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil2.22%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.22%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.96%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.96%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil1.48%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil1.48%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil1.48%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil1.48%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.48%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.48%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.48%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.48%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.48%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.74%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.74%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.74%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.74%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.74%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.74%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.74%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.74%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.74%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.74%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2124908007Soil microbial communities from sample at FACE Site Metagenome WIR_ElevOz2EnvironmentalOpen in IMG/M
2170459005Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cmEnvironmentalOpen in IMG/M
2170459024Grass soil microbial communities from Rothamsted Park, UK - FD1 (NaCl 300g/L 5ml)EnvironmentalOpen in IMG/M
2189573004Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)EnvironmentalOpen in IMG/M
2199352024Bare-fallow DEEP SOILEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300003267Sugarcane bulk soil Sample L1EnvironmentalOpen in IMG/M
3300003324Sugarcane bulk soil Sample H2EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005260Microbial communities on the surface of kaolinite enhanced biochar from soil with fertiliser in Sydney, AustraliaEnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005533Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1EnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005537Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1EnvironmentalOpen in IMG/M
3300005538Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1EnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300005898Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_405EnvironmentalOpen in IMG/M
3300005902Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_102EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006580Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006953Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300011106Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300013104Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaGHost-AssociatedOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300014497Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)EnvironmentalOpen in IMG/M
3300015262Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaGHost-AssociatedOpen in IMG/M
3300015356Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300017937Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4EnvironmentalOpen in IMG/M
3300017994Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300020070Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020076Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3)EnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300022467Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300024179Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK36EnvironmentalOpen in IMG/M
3300024187Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK13EnvironmentalOpen in IMG/M
3300024249Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK17EnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026295Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300027773Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027826Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027857Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031544Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26EnvironmentalOpen in IMG/M
3300031640Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23EnvironmentalOpen in IMG/M
3300031682Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22EnvironmentalOpen in IMG/M
3300031736Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031939Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2EnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300032067Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
FWIRElOz_055611802124908007SoilMEQNELFPHVNDSIRSLASQGPDTETWEFICECPDVTCHVLVSLTLFEFDERRKASPPAPIVAHS
E41_006230902170459005Grass SoilMEQIELFPHVNDSIRGLASEGPPTETWEFICECPDVTCHALVTLTLVEFDERREALPPAPILATEHD
FD1_080854802170459024Grass SoilVNDSIRTLAGEGPPSQMWEFICECPEVTCHTMVSLTLSEFDGRRAALPPVPILAAEHTGT
FG2_069505902189573004Grass SoilMEHSELFPHVNDAIRKLASEGPTGQTWEFICECPELACHALVSLTLNEFDERRSASPSIPVLASEHPEPA
deeps_039038902199352024SoilMDPDGLFGHVNDSIRGLATEGPLSETWEFICECSGVACHQMVSLTLLEFDERRAASPPAPVLAKHD
C688J35102_11838080613300002568SoilMGATTLIDADGLFGHVNNSIRGLAPDGPPDDAWEFLCECPDLECHALVSLTLADFDARRETFPPSPILSSTHVD*
C688J35102_11949716623300002568SoilMEQNQLFPEVNDSIRRSAAEGPVTQTWEFICECPDVTCHALVSLTLVEFDQRRRASPPAPILAREHGAERPR
soilL1_1009645733300003267Sugarcane Root And Bulk SoilMEGDGVFVHVNDSIRKLAGAGPAGQTWEFICECPELTCHVLVSLTLAEFDERRAASPPLPVLSAEHGS*
soilH2_1043569033300003324Sugarcane Root And Bulk SoilMLDANGLFGHVNDSIRGLATEGQLDETWQFMCECPDVTCHAPVSLTLAEFDARRSASPPSPILSSTHVD*
Ga0062595_10007380933300004479SoilMEGDGVFVHVNDSIRKLASAGPATQTWEFICECPELTCHALVSLTLTEFDERRAALPPLPVLSSEHWS*
Ga0062595_10035920643300004479SoilMKNNGVFTHVNDSIRRLATDGPESQTWEFICECPELTCHTLVSLTLTEFDERRAAMPPLPILALEHGSTNGRG*
Ga0062595_10073777023300004479SoilMEAHEAFGHVNDSIRKLAPEGPATETWEFICECPDVECHALVSLTLLEFDERRAALPPVPILATHADD*
Ga0062595_10168458723300004479SoilMKDSGVFVHVNDSIRGLASDGPATQTWEFICECPELTCHALVTLTLTEFDERRAATPPLPVLATEHGV*
Ga0066679_1065304623300005176SoilMENNGVFAHVNDSIRTLAADGPASQTWEFICECPELGCHTLVSLTLSEFDERRAAMPSLPILATEHGGN*
Ga0074072_101683053300005260SoilMETYEAFTRVNDSIRGLATEGPLDETWEFYCECPDVGCHTLISLTLHEFDERRASSPPIPILGLHAEPVLAD*
Ga0070683_10032310233300005329Corn RhizosphereMEEAELFPHVNDSIRRSAAEGPEAETWEFICECPDVTCHALVSLTLDEFDELRRASPPAPILSTNHEHPGVRD*
Ga0070682_10036356813300005337Corn RhizosphereMENNGVFAHVNDSIRRLAADGPANQTWEFICECPELTCHTLVSLTLTEFDERRTKRPSQPILATEHGG*
Ga0070691_1082306813300005341Corn, Switchgrass And Miscanthus RhizosphereFAHVNDSIRRLAADGPANQTWEFICECPELTCHTLVSLTLTEFDERRTERPSLPILATKHGG*
Ga0070687_10145517423300005343Switchgrass RhizosphereMGATVLDADGLFGHVNDSIRGLAPEGPPDDSWEFICECPDLGCHALVSLTLADFDARRSASPPSPILSLTHVD*
Ga0070675_10079754913300005354Miscanthus RhizosphereATVLDADGLFGHVNDSIRGLAPEGPPDESWEFICECPDLGCHALVSLTLADFDARRSASPPSPILSLTHVD*
Ga0070671_10014312943300005355Switchgrass RhizosphereMQMAMIEADNLFAHVNDSIRGLAIDGPPDEQWQFICECPDLECHALVSLTLDEFDAQRSALPPSPILSFSHA*
Ga0070673_10120584923300005364Switchgrass RhizosphereMGATVLDADGLFGHVNDSIRGLAPEGPADESWEFICECPDLGCHALVSLTLADFDARRSASPPSPILSLTHVD*
Ga0070667_10171747513300005367Switchgrass RhizosphereMEATVLDADGLFGHVNDSIRGLAPEGPADESWEFICECPDLGCHALVSLTLADFDARRSASPPSPILSLTHVD*
Ga0070709_1003088243300005434Corn, Switchgrass And Miscanthus RhizosphereMEQAELFPHVNDSIRKSAPEGPGAETWEFICECPDVTCHALVSLTLEEFDELRRASPPAPILSTSHERPRVRG*
Ga0070709_1081035323300005434Corn, Switchgrass And Miscanthus RhizosphereMERKGLFGHVNDSIRGLATEGPLTETWEFICECPDVACHMMVSLTLIEFDEHRTATPPSPILAEHHIDSVCT*
Ga0070714_10014476643300005435Agricultural SoilMEQNELFPHVNDSIRSLASQGPDTETWEFICECPDVTCHILVSLTLDEFDERRRALPPTPILASEHA*
Ga0070714_10127367413300005435Agricultural SoilMKDNGVFVHVNDSIRGLASDGPATQTWEFICECPELTCHALVSLTLSEFDERRAATPALPVLATEHSV*
Ga0070714_10242105323300005435Agricultural SoilMEREGAFEEVNDAIRRLAPEGPATEVWEFFCECPDVECHMLVSMTLAQFDERR
Ga0070713_10213066013300005436Corn, Switchgrass And Miscanthus RhizosphereMEEAELFPHVNDSIRRSAAEGPEAETWEFICECPDVTCHALVSLTLDEFDELRRASPPAPILSTNHEHPRVRD*
Ga0070711_10131387713300005439Corn, Switchgrass And Miscanthus RhizosphereMEQNELFPHVNDSIRSLASQGPDTETWEFICECPDVTCHILVSLTLDEFDERRRALPPT
Ga0070711_10141748223300005439Corn, Switchgrass And Miscanthus RhizosphereMEQNELFPHVNDSIRSLASQGPDTETWEFICECPDVTCHVLVSLTLFEFDERRKASPPAPIVAHS*
Ga0070681_1016315113300005458Corn RhizosphereGDQEWAMENNGVFAHVNDSIRRLAADGPANQTWEFICECPELTCHTLVSLTLTEFDERRTERPSLPILATEHGG*
Ga0070741_10012429183300005529Surface SoilMEQNGIFEHVNDSIRKLASQGPANQTWEFICECHELGCHMFVSLTLNEFDARRGASPPQPILALRHDA*
Ga0070741_1029529233300005529Surface SoilMEQDVLFSHLNDSIRKLASEGPSSETWDFVCECADATCHALVSLTLHEFDERRSASPPAPVLAGGHAAAV*
Ga0070741_1066364133300005529Surface SoilMGAMMIDADGLFGHVNDSIRGLAFEGPADELWQFICECPDLTCHAMVSLTLDEFDARRSASPPSPILSLTHVD*
Ga0070679_10049115533300005530Corn RhizosphereMENNGVFAHVNDSIRKLAADGPASQTWEFICECPELTCHTLVSLTLTEFDERRTERPSLPILATKHGG*
Ga0070734_1002832623300005533Surface SoilVIDAGGLFGHVNDSIRDLATDAPSNEKWHFVCECPDLECHAVVSLTLGEFDASRSSSTPTPILSLHHDH*
Ga0070734_1012708123300005533Surface SoilMTTTMIDADGLFGHVNDSIRGLATEGPPDETWQFICECSDLGCHALVSLTLADFDARRSASPPSPILSMTHDD*
Ga0070684_10122264123300005535Corn RhizosphereMEEAELFPHVNDSIRRSAAEGPEAETWEFICECPDVSCHALVSLTLDEFDELRRASPPAPILSTSHEHPRVRD*
Ga0070730_1073087333300005537Surface SoilMIEEDSLFGHVNDSIRGLALPGEPDETWEFICECPDLECHELVSLTLGEFDTFRSASPPSPIVSLHHVA*
Ga0070731_1018613013300005538Surface SoilMEHSELFPHVNDSIRKLASEGPAGQTWEFICECPELGCHALVSLTLSQFDERRAASPSIPILAAEHPDPA*
Ga0070695_10000111683300005545Corn, Switchgrass And Miscanthus RhizosphereMENNGVFAHVNDSIRRLAADGPANQTWEFICECPELTCHTLVSLTLTEFDERRTERPSLPILATKHGG*
Ga0066670_1003488033300005560SoilMENNGVFAHVNDSIRTLAADGPASQTWEFICECPELGCHMLVSLTLSEFDERRAAMPSLPILATEHGGN*
Ga0068855_10258439223300005563Corn RhizosphereMEQAELFPHVNDSIRRSAAEGPEAETWEFICECPDVTCHALVSLTLDEFDELRRASPPAPILSTSHEHPRVRD*
Ga0066654_1069079423300005587SoilMENNGVFAHVNDSIRTLAADGPANQTWEFICECPELGCHMLVSLTLSEFDERRAAMPSLPILATEHGGN*
Ga0068856_10115088223300005614Corn RhizosphereMEQAELFPHVNDSIRRSAAEGPEAETWEFICECPDVTCHALVSLTLDEFDELRRASPPAPILSTNHEHPRVRD*
Ga0066903_10080808643300005764Tropical Forest SoilMKRNGLFGHVNDSIRGLATEGPLDETWEFICECPDVECHTMVSVTLVEFDQRRGASPPVPILADHHDD*
Ga0068862_10103757823300005844Switchgrass RhizosphereMSAVIDADNLFGHVNDSIRGLATEGPPDEAWEFICECADLECHALVSMTLTEFDASRSSSPPYPVLSLHHVG*
Ga0075276_1007209723300005898Rice Paddy SoilMGRDGLFGQVNDSIRGLATETPGNERWEFFCECPDVGCHALVSLTLYEFDERRAASPPAPILAASHAAAVGD*
Ga0075273_1007245613300005902Rice Paddy SoilMEQDGLFVHVNDSIRRVASEGPPTQTWEFICECPDVSCHALVSLTLLEFDERRAASPPVPIVAMEHEGVAVGEPQSGN*
Ga0070717_1011519313300006028Corn, Switchgrass And Miscanthus RhizosphereMEQAELFPHVNDSIRKSAPEGLGAETWEFICECPDVTCHALVSLTLEEFDELRRASPPAPILSTSHERPRVRG*
Ga0070717_1116186513300006028Corn, Switchgrass And Miscanthus RhizosphereMEHSELFPHVNDSIRKLASEGPVGQTWEFICECPELGCHELVSLTLSEFDERRAASPSIPILASEHPDPA*
Ga0070716_10153578023300006173Corn, Switchgrass And Miscanthus RhizospherePMEQSQLFPHVNDSIRRLASQGPPSETWEFICECPDVTCHALVKLTLVEFDEHRGASPPAPIVASEHD*
Ga0070716_10155446113300006173Corn, Switchgrass And Miscanthus RhizosphereMEQAELFPHVNDSIRSSAAEGPATETWEFICECPDVNCHALVTLTLLEFDERRQASPPAPILATEHAA*
Ga0074049_1217737713300006580SoilMEQNELLPHVNDSIRSLASDGPDTETWEFICECPDVTCHILVSLTLDEFDERRRALPPTPILAEHD*
Ga0066660_10002550113300006800SoilMENNGVFAHVNDSIRTLAADGPASQTWEFICECPELGCHMPVSLTLSEFDERRAAMPSLPILATEHGGN*
Ga0074063_1293832533300006953SoilMIDVDSLFGHVNDSIRGLATEGTTDETWEFICECPDLDCHALVSLTLSEFDARRSAAPPAPIVSVSHAA*
Ga0079219_1062385923300006954Agricultural SoilMDREQLFGHVNDSIRALTPEAPPTETLEFVCECTDVECHTMVSLTLREFDERRAASPPTPVLATHHDD*
Ga0105240_1004264033300009093Corn RhizosphereMENNGVFAHVNDSIRRLAADGPANQTWEFICECPELTCHALVSLTLTEFDERRAERPSLPILATEHGG*
Ga0105248_1060747923300009177Switchgrass RhizosphereMGATVLDADGLFGHVNDSIRGLAPEGPPDESWEFICECPDLGCHALVSLTLADFDARRSASPPSPILSLTHVD*
Ga0105237_1008597953300009545Corn RhizosphereMENNGVFAHVNDSIRRLAADGPANQTWEFICECPELTCHALVSLTLTEFDERRTERPSLPILATKHGG*
Ga0105238_1145764913300009551Corn RhizosphereVGATMLDADGLFGHVNDSIRGLATTGPEDETWPFICECPDLDCHALVTLTLSEFDAFRSAAPPSPILSSLHVN*
Ga0126373_1261136723300010048Tropical Forest SoilLNGVGLFGQVNDSIRELATDGSAVETWEFICECPDVTCHSMVSLTLIEFDERRAASPPAPILAEHG*
Ga0126378_1151540923300010361Tropical Forest SoilMNGVGLFGQVNDSIRELATDGSAVETWEFICECPDVTCHSMVSLTLIEFDERRAASPSAPILAEHG*
Ga0126379_1090652123300010366Tropical Forest SoilMNGVGLFGQVNDSIRELATDGSAVETWEFICECPDVTCHSMVTLTEFDERRAASPPAPILAEHG*
Ga0134125_1276811913300010371Terrestrial SoilMLDGDGLFGHVNDSIRGLAIEGGPPDEAWEFLCECPDLECHALVSLTLVEFDAHRAASPPSPILSLTHAD*
Ga0126381_10001727373300010376Tropical Forest SoilMNGVGLFGQVNDSIRELATDGSAVETWEFICECPDVTCHSMVSLTLIEFDERRAASPPAPILAEHG*
Ga0134126_1078910323300010396Terrestrial SoilMEVDGAMEVDGAFGHVNDSIRKLATQGPASQRWDFFCECADVECHTVVSLTLFEFDQRRAASPPVPVLAAHHDD*
Ga0126383_1326812923300010398Tropical Forest SoilMNGVGLFGQVNDSIRELATDGSAVETWEFICECPDVTCHSMVSLTLIEFDERRAASPPAPIL
Ga0134121_1095605313300010401Terrestrial SoilMEFTEMRAAMVEADGLFGHVNDAIRGLATEGPDDELWEFICECPSLDCHALVSLTLVEFDARRSALPPTPIVSLIHVN*
Ga0151489_136913313300011106SoilMIDADSLFGHVNDSIRGLATESTTDEAWAFVCECPDLDCHALVTLTLIEFDARRSASPPSPIVSLSHAA*
Ga0137365_1076030523300012201Vadose Zone SoilMENNGVFAHVNDSIRKVAADGPASQTWEFICECPELGCHTLVSLTLSEFDERRVATPPLPILATEHGRN*
Ga0137376_1050782223300012208Vadose Zone SoilMESNGVFAHVNDSIRTLAGDGPASQTWEFICECPELGCHTLVSLTLSEFDERRVATPPLPILATEHGGN*
Ga0126375_1167996223300012948Tropical Forest SoilMEWAGLFVHVNDSIRELARESPLTQRWEFICECTQLSCRVPVSLTLTEFDSRRAASPPIPVLAAGHAD*
Ga0164298_1105189323300012955SoilMEQNGLFAHVNDSIRKAAGQGPPMETWEFICECPELTCHALVSLTLSEFDERRAATPALPVLATEHGV*
Ga0164299_1064743323300012958SoilMEHAELFPHVNDSIRKSAAEGPTTETWEFICECPDVNCHALVTLTLLEFDKRRQASPPAPILAAEHAA*
Ga0164299_1159396223300012958SoilMIDADDLSGPVNVSIRRLATDGPVDELWQFICECPDLGCHALVSITLADFDARRSASPPSPIISLTHVDRLTYA*
Ga0164301_1022498123300012960SoilMEQNGLFAHVNDSIRKAAGQGPPMETWEFICECPEMSCHALVRLTLTEFDERRSALPPVPVLAAVHVGS*
Ga0164301_1186275423300012960SoilMEHAELFHHVNDSIRKSAAEGPTTETWEFICECPDVNCHALVTLTLLEFDKRRQASPPAPILAAEHAA*
Ga0164309_1154328313300012984SoilMIDADSLFGHVNDSIRGLATESTTDEAWAFVCECPDIDCHALVTLTLIEFDARRSASPPSPIVSLSHAA*
Ga0164308_1132593813300012985SoilMEDSGLFAHVNDSIRRLASDGPPTQTWEFICECPELTCHTLVSLTLTEFDECRAATP
Ga0164306_1179600213300012988SoilMGALMIDADELFGHVNDSIRGLATDGPVDELWQFICECPDLGCHALVSITLADFDARRSASPPSP
Ga0157370_1067001833300013104Corn RhizosphereMENNGVFAHVNDSIRRLAADGPASQTWEFICECPELTCHALVSLTLTEFDERRTERPSLPILATEHGG*
Ga0157369_1029817633300013105Corn RhizosphereMENNGVFAHVNDSIRRLAADGPASQTWEFICECPELTCHALVSLTLTEFDERRTERPSLPILATKHGG*
Ga0182008_1018582523300014497RhizosphereMQEDGLFAHVNDSIRTLATDGPVTQTWEFICECPDLGCHALVSLTLIEFDARRAAVPSVPILACSHAGAAD*
Ga0157376_1162693733300014969Miscanthus RhizosphereDCSGVTIMIDADGLFGHVNDSIRGLAPEGPPEEAWEFICDCPDLGFHALVSLTLSEFDARRSASPPSPILSLTHVD*
Ga0173483_1064927223300015077SoilMDADALFGHVNDSIRKLAPEGSTGEAWEFLCECPDVSCHAIVSITLLEFDERRAASPPLPVLATHIDGHGAVNGS*
Ga0182007_1011775533300015262RhizosphereVEPQGPFGHVNDSIRRLATEGPDTETWEFFCECPDVECHTMVALTLLEFDERRAGASPVPILAA
Ga0134073_1004580133300015356Grasslands SoilMENNGVFAHVNDSIRTLAADGPASQTWEFICECPELGCHTLVSLTLSEFDERRAAMPSLPILATEHGGNSLPAEHIAHGLSARL
Ga0132256_10279959123300015372Arabidopsis RhizosphereMERHGLFGHVNDSIRGLATEGPRDETWEFVCECHDVACHTMVSVTLLEFDQRRGAR
Ga0187809_1014678613300017937Freshwater SedimentMEQNQLFPHVNDSIRSLASQGPETETWEFICECPDVRCHALVTLTLIEFDERRGASPPAPILAAEHA
Ga0187809_1040692713300017937Freshwater SedimentVEQSQLFPHVNDSIRRLASQGPPTETWEFICECPDVTCHVLVSLTLVEFDERRGSSPPAAILAAEHD
Ga0187822_1036211613300017994Freshwater SedimentMDPEGLFGHVNDSIRKLATEGPSTQSWEFICECADVSCHTLVSLTLGEFDQRRAASPPV
Ga0066667_1205938223300018433Grasslands SoilMENNGVFAHVNDSIRTLAADGPASQTWEFICECPELGCHTLVSLTLSEFDERRAAMPSLPILATEHGGN
Ga0066662_1011784153300018468Grasslands SoilFAHVNDSIRTLAADGPASQTWEFICECPELGCHMPVSLTLSEFDERRAAMPSLPILATEHGGN
Ga0206356_1166790013300020070Corn, Switchgrass And Miscanthus RhizosphereMENNGVFAHVNDSIRRLAADGPANQTWEFICECPELTCHTLVSLTLTEFDERRAERPSLPILATEHGG
Ga0206355_144914113300020076Corn, Switchgrass And Miscanthus RhizosphereMENNGVFAHVNDSIRRLAADGPANQTWEFICECPELTCHALVSLTLTEFDERRTERPSLPILATKHGG
Ga0210402_1045135523300021478SoilMEQNGLFAQVNDSIRKLASHGPDIQTWEFICECPEIKCHELVSLTLNEFDARRTAAPPVPILAVEHGASVSGPSRP
Ga0126371_1277569113300021560Tropical Forest SoilNDSIRRLASEGPESETWEFICECPDVTCHVMVSLTLTEFDQRRAISAAAPILATEHSG
Ga0224712_1022211533300022467Corn, Switchgrass And Miscanthus RhizosphereMEQAELFPHVNDSIRRSAAEGPEAETWEFICECPDVSCHALVSLTLDEFDELRRASPPAPILSTSHEHPRVRD
Ga0247695_102266913300024179SoilWYRAFAVADSSRRIGRAFMEQAELFPHVNDSIRRSAAEGPEAETWEFICECPDVTCHALVSLTLDEFDELRRASPPAPILSTNHEHPGVRD
Ga0247672_104017123300024187SoilMEEAELFPHVNDSIRRSAAEGPEAETWEFICECPDVTCHALVSLTLDEFDELRRASPPAPILSTNHEHPRVRD
Ga0247676_102581323300024249SoilMEEAELFPHVNDSIRRSAAEGPEAETWEFICECPDVTCHALVSLTLDEFDELRRASPPAPILSTNHEHPGVRD
Ga0207692_1045455113300025898Corn, Switchgrass And Miscanthus RhizosphereIGTRMEQNELFPHVNDSIRSLASQGPDTETWEFICECPDVTCHILVSLTLDEFDERRRALPPTPILASEHA
Ga0207699_1040262323300025906Corn, Switchgrass And Miscanthus RhizosphereMERKGLFGHVNDSIRGLATEGPLTETWEFICECPDVACHMMVSLTLIEFDEHRTATPPSPILAEHHIDSVCT
Ga0207699_1070771223300025906Corn, Switchgrass And Miscanthus RhizosphereMEQAELFPHVNDSIRKSAPEGPGAETWEFICECPDVNCHALVTLTLLEFDERRQASPPAPILATEHAA
Ga0207671_1017129633300025914Corn RhizosphereMENNGVFAHVNDSIRRLAADGPASQTWEFICECPELTCHTLVSLTLTEFDERRAERPSLPILATEHGG
Ga0207694_1119446533300025924Corn RhizosphereVGATMLDADGLFGHVNDSIRGLATTGPEDETWPFICECPDLDCHALVTLTLSEFDAFRSAAPPSPILSSLHVN
Ga0207700_1036035313300025928Corn, Switchgrass And Miscanthus RhizospherePERPMERKGLFGHVNDSIRGLATEGPLTETWEFICECPDVACHMMVSLTLIEFDEHRTATPPSPILAEHHIDSVCT
Ga0207700_1072161213300025928Corn, Switchgrass And Miscanthus RhizosphereMEQAELFPHVNDSIRKSAPEGPGAETWEFICECPDVTCHALVSLTLEEFDELRRASPPARILSTSHERPRVRG
Ga0207644_1011430343300025931Switchgrass RhizosphereMQMAMIEADNLFAHVNDSIRGLAIDGPPDEQWQFICECPDLECHALVSLTLDEFDAQRSALPPSPILSFSHA
Ga0207665_1024841013300025939Corn, Switchgrass And Miscanthus RhizosphereMEQSQLFPHVNDSIRRLASQGPPSETWEFICECPDVTCHALVKLTLVEFDEHRGASPPAPIVASEHD
Ga0207711_1053005633300025941Switchgrass RhizosphereMGATVLDADGLFGHVNDSIRGLAPEGPADESWEFICECPDLGCHALVSLTLADFDARRSASPPSPILSLTHVD
Ga0207702_1092872823300026078Corn RhizosphereMEQAELFPHVNDSIRRSAAEGPEAETWEFICECPDVTCHALVSLTLDEFDELRRASPPAPILSTNHEHPRVRD
Ga0207676_1032137923300026095Switchgrass RhizosphereMGATVLDADGLFGHVNDSIRGLAPEGPADESWEFICECPDLECHSLVTLTLREFDTFRSALPPTPILSLIHAN
Ga0209234_102349733300026295Grasslands SoilMENNGVFAHVNDSIRTLAADGPASQTWEFICECPELGCHMLVSLTLSEFDERRAAMPSLPILATEHGGN
Ga0209810_100821073300027773Surface SoilMEQDVLFSHLNDSIRKLASEGPSSETWDFVCECADATCHALVSLTLHEFDERRSASPPAPVLAGGHAAAV
Ga0209060_1004395723300027826Surface SoilVIDAGGLFGHVNDSIRDLATDAPSNEKWHFVCECPDLECHAVVSLTLGEFDASRSSSTPTPILSLHHDH
Ga0209060_1033524123300027826Surface SoilMTTTMIDADGLFGHVNDSIRGLATEGPPDETWQFICECSDLGCHALVSLTLADFDARRSASPPSPILSMTHDD
Ga0209166_1066219513300027857Surface SoilMIEEDSLFGHVNDSIRGLALPGEPDETWEFICECPDLECHELVSLTLGEFDTFRSASPPSPIV
Ga0307497_1044573323300031226SoilMEQTELFPHVNDSIRGLASEGPPTETWEFICECPDVTCHALVTLTLVEFDERREALPPAPILATEHD
Ga0170824_12576981713300031231Forest SoilQLFPHVNDSIRRLASEGLPTETWEFICECPDVTCHAQVTLTLVEFDERREASPPAAILAEQHD
Ga0318534_1021316813300031544SoilMDADGLFGHVNDSIRELATEGQPAETWEFVCECPDVGCHEMVSLTLVEFDERRAASPPAPILAAHD
Ga0318534_1086518823300031544SoilMIEAEGLFTHVSDAIRGLATQGPPEETWQFICECPDLQCHELVSHTLDEFDAHRSASPPAPILSLDHRRPEELVSFERLRASG
Ga0318555_1027179123300031640SoilDSIRELATEGQPAETWEFVCECPDVGCHEMVSLTLVEFDERRAASPPAPILAAHD
Ga0318560_1041773413300031682SoilMIEAEGLFTHVNDAIRGLATQGPPEETWQFICECPDLQCHELVSHTLDEFDAHRSASPPAPILSLD
Ga0318501_1009779813300031736SoilMDADGLFGHVNDSIRELATEGQPAETWEFVCECPDVGCHEMVSLTLVEFDERRAASPPAP
Ga0308175_100000159223300031938SoilMAPMERDGLFVHVNDSIRKLAGQGPGGQTWEFICECPEVTCHTLVSLTLIEFDTRRASSPPVPVLAAQHDHSLAAG
Ga0308175_10003270523300031938SoilMDPDGLFGHVNDSIRGLATEGPLSETWEFICECSDVACHQMVSLTLLEFDERRAASPPAPVLAKHE
Ga0308175_10252385113300031938SoilRMDPDDLFGHVNDSIRRLATEGPLSETWEFICECPNVACHQMVSLTLHEFDERRAASPPAPVLAKHD
Ga0308174_1053804533300031939SoilMQVGELFPHVNDSIRSLASRGPASQTWEFICECSDLTCHALISLTLVEFDRRRAASPPAPILAEHG
Ga0308174_1086063613300031939SoilMKQNGLFVHVNDSIRKLATEGPATETWEFICECPEVTCHMLVALTLDEFDERRTASPPVPVVATEHAGPGV
Ga0308176_1152372123300031996SoilMDPDDLFGHVNDSIRRLATEGPLSETWEFICECPNVACHQMVSLTLHEFDERRAASPPAPVLAKHD
Ga0318524_1019346413300032067SoilDVDGLFGHVNDSIRELATEGQPAETWEFVCECPDVGCHEMVSLTLVEFDERRAASPPAPILAAHD
Ga0307471_10141632223300032180Hardwood Forest SoilMEQNGLFAHVNDSIRKSAGQGLPTETWEFICECPEISCHAWVSLTLTEFDERRSAVPPTPILAAEHVG


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