Metagenome / Metatranscriptome Family F058360

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F058360
Family Type	Metagenome / Metatranscriptome
Number of Sequences	135
Average Sequence Length	96 residues
Representative Sequence	AIISILKSTAYNAVTLVWIGYLKQQPQLVPRVEAATNANTIGIAWAASGAVPDPDASFMLRVEQAVDRVLSRSDWPRPTAKGSRIVSRKPNPEEGN
Number of Associated Samples	126
Number of Associated Scaffolds	135

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.48 %
% of genes near scaffold ends (potentially truncated)	98.52 %
% of genes from short scaffolds (< 2000 bps)	88.15 %
Associated GOLD sequencing projects	121
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.519 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (16.296 % of family members)
Environment Ontology (ENVO)	Unclassified (26.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.370 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 37.90% β-sheet: 0.00% Coil/Unstructured: 62.10%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 135 Family Scaffolds
PF03544	TonB_C	1.48
PF00248	Aldo_ket_red	0.74
PF00291	PALP	0.74
PF01734	Patatin	0.74
PF03720	UDPG_MGDP_dh_C	0.74
PF08281	Sigma70_r4_2	0.74
PF02548	Pantoate_transf	0.74
PF14310	Fn3-like	0.74
PF00111	Fer2	0.74
PF16338	AGL_N	0.74
PF04185	Phosphoesterase	0.74
PF02737	3HCDH_N	0.74
PF01546	Peptidase_M20	0.74

COG ID	Name	Functional Category	% Frequency in 135 Family Scaffolds
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	1.48
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.74
COG0287	Prephenate dehydrogenase	Amino acid transport and metabolism [E]	0.74
COG0413	Ketopantoate hydroxymethyltransferase	Coenzyme transport and metabolism [H]	0.74
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.74
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.74
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	0.74
COG1748	Saccharopine dehydrogenase, NADP-dependent	Amino acid transport and metabolism [E]	0.74
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	0.74
COG2084	3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase	Lipid transport and metabolism [I]	0.74
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.74
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	0.74
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.52 %
Unclassified	root	N/A	1.48 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.52 %
Unclassified	root	N/A	1.48 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.52 %
Unclassified	root	N/A	1.48 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	94.81 %
Unclassified	root	N/A	1.48 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	94.07 %
Unclassified	root	N/A	1.48 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	94.07 %
Unclassified	root	N/A	1.48 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001545\|JGI12630J15595_10080059	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	642	Open in IMG/M
3300001593\|JGI12635J15846_10131693	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1748	Open in IMG/M
3300004091\|Ga0062387_100096172	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1580	Open in IMG/M
3300004120\|Ga0058901_1266856	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	948	Open in IMG/M
3300004139\|Ga0058897_10791843	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	666	Open in IMG/M
3300004152\|Ga0062386_100456928	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1033	Open in IMG/M
3300004295\|Ga0068932_1271839	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300004614\|Ga0068956_1263211	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	803	Open in IMG/M
3300004635\|Ga0062388_102502601	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300005454\|Ga0066687_10677558	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	613	Open in IMG/M
3300005538\|Ga0070731_11085206	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300005557\|Ga0066704_10541384	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	760	Open in IMG/M
3300005591\|Ga0070761_10027136	All Organisms → cellular organisms → Bacteria	3195	Open in IMG/M
3300006028\|Ga0070717_10538966	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1056	Open in IMG/M
3300006052\|Ga0075029_100532238	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	779	Open in IMG/M
3300006174\|Ga0075014_100469151	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	699	Open in IMG/M
3300006176\|Ga0070765_100157668	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2031	Open in IMG/M
3300006642\|Ga0075521_10169783	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1028	Open in IMG/M
3300006800\|Ga0066660_10888816	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	726	Open in IMG/M
3300009089\|Ga0099828_10314481	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1410	Open in IMG/M
3300009640\|Ga0116126_1270253	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300009645\|Ga0116106_1008253	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3956	Open in IMG/M
3300009700\|Ga0116217_10642007	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300010343\|Ga0074044_10027109	All Organisms → cellular organisms → Bacteria	4072	Open in IMG/M
3300010343\|Ga0074044_10936317	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300010854\|Ga0126360_1017031	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300011056\|Ga0138538_1016337	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	860	Open in IMG/M
3300011060\|Ga0138583_1045451	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300011061\|Ga0138534_1040166	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300011120\|Ga0150983_13251560	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300011269\|Ga0137392_10117312	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2118	Open in IMG/M
3300011270\|Ga0137391_10755485	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	804	Open in IMG/M
3300011271\|Ga0137393_11291079	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300012189\|Ga0137388_10523343	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1102	Open in IMG/M
3300012189\|Ga0137388_11222629	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	689	Open in IMG/M
3300012200\|Ga0137382_10088589	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2021	Open in IMG/M
3300012202\|Ga0137363_10549608	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	973	Open in IMG/M
3300012202\|Ga0137363_11126345	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	667	Open in IMG/M
3300012205\|Ga0137362_10200770	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1716	Open in IMG/M
3300012208\|Ga0137376_10260858	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1503	Open in IMG/M
3300012210\|Ga0137378_11591311	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300012361\|Ga0137360_11233677	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	647	Open in IMG/M
3300012362\|Ga0137361_10742907	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	895	Open in IMG/M
3300012362\|Ga0137361_11023686	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	746	Open in IMG/M
3300012917\|Ga0137395_10798733	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	683	Open in IMG/M
3300012917\|Ga0137395_10810674	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	678	Open in IMG/M
3300012918\|Ga0137396_11129717	Not Available	558	Open in IMG/M
3300012929\|Ga0137404_12014436	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300014165\|Ga0181523_10131626	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1483	Open in IMG/M
3300014200\|Ga0181526_10044995	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2824	Open in IMG/M
3300014657\|Ga0181522_10680712	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300015167\|Ga0167661_1026303	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1081	Open in IMG/M
3300017823\|Ga0187818_10589518	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300017932\|Ga0187814_10064456	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1344	Open in IMG/M
3300017942\|Ga0187808_10369796	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	653	Open in IMG/M
3300017955\|Ga0187817_10135777	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1561	Open in IMG/M
3300017973\|Ga0187780_11093894	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300018006\|Ga0187804_10022860	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2294	Open in IMG/M
3300018007\|Ga0187805_10022737	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2744	Open in IMG/M
3300018008\|Ga0187888_1117395	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1118	Open in IMG/M
3300018043\|Ga0187887_10130852	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1506	Open in IMG/M
3300020579\|Ga0210407_10070836	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2617	Open in IMG/M
3300020581\|Ga0210399_10493016	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1019	Open in IMG/M
3300020583\|Ga0210401_10254431	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1616	Open in IMG/M
3300021088\|Ga0210404_10186358	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1106	Open in IMG/M
3300021405\|Ga0210387_11894529	Not Available	500	Open in IMG/M
3300021411\|Ga0193709_1052113	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	952	Open in IMG/M
3300021478\|Ga0210402_11600671	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300021479\|Ga0210410_11231487	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300022507\|Ga0222729_1005380	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1193	Open in IMG/M
3300022523\|Ga0242663_1104228	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300022717\|Ga0242661_1082056	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300022721\|Ga0242666_1038937	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	968	Open in IMG/M
3300022724\|Ga0242665_10229806	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300023030\|Ga0224561_1011481	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	704	Open in IMG/M
3300023259\|Ga0224551_1069993	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300024330\|Ga0137417_1032030	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1225	Open in IMG/M
3300025878\|Ga0209584_10088556	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1134	Open in IMG/M
3300026214\|Ga0209838_1079525	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300026294\|Ga0209839_10049255	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1531	Open in IMG/M
3300026482\|Ga0257172_1058355	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	707	Open in IMG/M
3300026496\|Ga0257157_1070130	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300026507\|Ga0257165_1033347	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	902	Open in IMG/M
3300026508\|Ga0257161_1041012	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	925	Open in IMG/M
3300026515\|Ga0257158_1041127	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	837	Open in IMG/M
3300027590\|Ga0209116_1020420	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1368	Open in IMG/M
3300027591\|Ga0209733_1017556	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1922	Open in IMG/M
3300027604\|Ga0208324_1005426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4439	Open in IMG/M
3300027635\|Ga0209625_1012703	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1840	Open in IMG/M
3300027651\|Ga0209217_1184568	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300027829\|Ga0209773_10251850	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	737	Open in IMG/M
3300027842\|Ga0209580_10118611	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1289	Open in IMG/M
3300027853\|Ga0209274_10195128	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1029	Open in IMG/M
3300027857\|Ga0209166_10255922	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	929	Open in IMG/M
3300027882\|Ga0209590_10669194	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300027910\|Ga0209583_10308603	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	721	Open in IMG/M
3300027911\|Ga0209698_10157275	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1860	Open in IMG/M
3300027911\|Ga0209698_10157365	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1859	Open in IMG/M
3300028047\|Ga0209526_10926669	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300028785\|Ga0302201_10052354	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2018	Open in IMG/M
3300028788\|Ga0302189_10199813	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	838	Open in IMG/M
3300028800\|Ga0265338_11133782	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300028874\|Ga0302155_10016029	All Organisms → cellular organisms → Bacteria → Acidobacteria	3826	Open in IMG/M
3300029883\|Ga0311327_10152896	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1630	Open in IMG/M
3300029913\|Ga0311362_10139543	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3003	Open in IMG/M
3300029915\|Ga0311358_10913463	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300029917\|Ga0311326_10244687	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	926	Open in IMG/M
3300029918\|Ga0302143_1104961	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	666	Open in IMG/M
3300029939\|Ga0311328_10270597	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1272	Open in IMG/M
3300029989\|Ga0311365_11708318	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300030019\|Ga0311348_10596352	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	824	Open in IMG/M
3300030741\|Ga0265459_10552005	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1037	Open in IMG/M
3300030836\|Ga0265767_109670	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	638	Open in IMG/M
3300030855\|Ga0075374_11069914	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300030991\|Ga0073994_12292986	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300030991\|Ga0073994_12326994	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	975	Open in IMG/M
3300031047\|Ga0073995_11994407	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	806	Open in IMG/M
3300031057\|Ga0170834_102053407	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	968	Open in IMG/M
3300031122\|Ga0170822_11292919	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	717	Open in IMG/M
3300031232\|Ga0302323_100006674	All Organisms → cellular organisms → Bacteria	9504	Open in IMG/M
3300031239\|Ga0265328_10156813	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	857	Open in IMG/M
3300031258\|Ga0302318_10144204	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1109	Open in IMG/M
3300031469\|Ga0170819_12326213	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	878	Open in IMG/M
3300031708\|Ga0310686_112923432	All Organisms → cellular organisms → Bacteria	3606	Open in IMG/M
3300031718\|Ga0307474_10322836	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1192	Open in IMG/M
3300031753\|Ga0307477_10361161	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	998	Open in IMG/M
3300031754\|Ga0307475_10392589	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1115	Open in IMG/M
3300031962\|Ga0307479_10442157	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1285	Open in IMG/M
3300031962\|Ga0307479_10619923	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1063	Open in IMG/M
3300031962\|Ga0307479_11847843	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300032515\|Ga0348332_12126374	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300032770\|Ga0335085_11303836	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	766	Open in IMG/M
3300032805\|Ga0335078_12344874	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300032828\|Ga0335080_10858287	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	934	Open in IMG/M
3300033433\|Ga0326726_10632280	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1031	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.52%
Host-Associated	Host-Associated	1.48%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.22%
Aquatic	Environmental → Aquatic	16.30%
Plants	Host-Associated → Plants	1.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.37%
Freshwater	Environmental → Aquatic → Freshwater	12.59%
Peat	Environmental → Terrestrial → Peat	11.11%
Sediment	Environmental → Aquatic → Sediment	3.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.48%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.07%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	12.59%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	11.11%
Loam	Environmental → Terrestrial → Soil → Loam	10.37%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.70%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.48%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.41%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.96%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	11.11%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.63%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.67%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.44%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.44%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.70%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.22%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.48%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.48%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.74%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.30%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.41%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	7.41%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.19%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.44%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.44%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.70%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.22%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.22%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.22%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.22%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.22%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.22%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.96%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.48%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.48%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.48%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.48%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.48%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.74%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.74%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.74%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.74%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.74%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004120	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF238 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004295	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 18 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004614	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 48 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009640	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010854	Boreal forest soil eukaryotic communities from Alaska, USA - W4-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011056	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 16 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011060	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 73 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011061	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 12 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300015167	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-11b, vegetated hydrological feature)	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021411	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c2	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022507	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022523	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022721	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023030	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU2	Environmental	Open in IMG/M
3300023259	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 20-24	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300026214	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047 (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300026496	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-A	Environmental	Open in IMG/M
3300026507	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-B	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300026515	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-A	Environmental	Open in IMG/M
3300027590	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1 (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028785	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_2	Environmental	Open in IMG/M
3300028788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_2	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028874	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_1	Environmental	Open in IMG/M
3300029883	I_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029913	III_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029915	III_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029917	I_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029918	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_1	Environmental	Open in IMG/M
3300029939	I_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029989	III_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030019	II_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030741	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assembly	Environmental	Open in IMG/M
3300030836	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030855	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA9 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031047	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031239	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG	Host-Associated	Open in IMG/M
3300031258	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12630J15595_100800592	3300001545	Forest Soil	ASVELILVSFVMCYGNGQPAIISLLKSTAYNAVTLVWIGYLKQQPQLVPRVEAATNENTIGMAWATSVAMPVPDASFMLRVEQAVDRVLSRSDWPRPTAQGSRIVSRKPNPEEGN*
JGI12635J15846_101316931	3300001593	Forest Soil	SLLKSTAYNAVTLVWIGYLKQQPQLVPKLEAIPNANAFGMALTASAAVPDPDASFMLRVEQAVDRVLARSDWPRPIANGPRIVSRKPNPEEGN*
Ga0062387_1000961724	3300004091	Bog Forest Soil	IAVTFIWIGYLRQQPQLVPRIEAIMGGNPLGMTFATPGGIPDPDAGFMTRVEQAVDRVLSRSDWPRPPAEETRVVSRKPRPEELN*
Ga0058901_12668561	3300004120	Forest Soil	VTLVWIGYLKQQPQLVPRVEAATNENTIGMAWATSGAMPVPDANFMLRVEQAVDRVLSRSDWPRPTAQGSRIVSRKPNPEEGN*
Ga0058897_107918431	3300004139	Forest Soil	SFVMWYGNGQEAVVSLLKSTAYNAVTLVWIGYLKQQPQLVPRVEAATHANTIGIAWAASGAAPDPDASFMLRVEQAVDRVLSRSDWPRPTAKGSRIVSRKPNPEEGN*
Ga0062386_1004569281	3300004152	Bog Forest Soil	YLKQQPQLVPTVETARRANTLGMAFAGPAAVPDPDAGFMLRVEQAVDRVLSRSDWPRPGTEEGRIVGRKPNPEEGN*
Ga0068932_12718391	3300004295	Peatlands Soil	VFASVQLILVSFLIRYGGSQEATLSLVKSTAYNVVTLVWIGYLIQQPQLVPKLSAVANANPFGMALATSAAVPDDAGYMLRIEQAVDRVLSRGDWPRPTTQGSRIVGRKPNPEESN*
Ga0068956_12632112	3300004614	Peatlands Soil	VFASVELVLVSIVMWYGNGQAAMISLLKSTAYNAVTLVWIGYLKQQPQLVPKVEAATNANTRGLALSTVPAVSDPDASFMLRVEQAVDRVLSRSDWPRPAAQGSRIVSRKPNPEESN*
Ga0062388_1025026011	3300004635	Bog Forest Soil	LKSTAYNAVTIIWIGYLRHEPQLVPKVEAVAYPNIPGMALATSAAAPDLDADFMLRAEQAVDRVLSRSNWPRPIAKGSRIIGRKPHPEEGN*
Ga0066687_106775581	3300005454	Soil	GFGVFASVELILVSIVMLYGNGQPAIISLLKSTAYNAVTLVWIGYLKQQPQLVPKLEAVPRPNALGMEWATSAAVPDPDASFMLRVEQAVDRVLSRSDWPRPIAQGSRIVGRKPNPEEGN
Ga0070731_110852062	3300005538	Surface Soil	YLRQQPELVPRVEPALNAFGLAFAGSASVTDADAGFMLRVEQAVDRVLSRSDWPRPATEENRIVGRKPNPEEGN*
Ga0066704_105413842	3300005557	Soil	LGFGVFASVELILVSFVMLYGNGQPAIISLLKSTAYNAVTLVWIGYLKQQPQLVPKLEAVPNANTFGMAWAASAPVPDPDASFMLRVEQAVDRVLSRSDWPRPIANGPRIVSRKPNPEEGN*
Ga0070761_100271361	3300005591	Soil	PQLVPNVEAVANANNLGMTLATSGGAPDPDAGFMLRVEQAVDRVLSRSDWPRPKAEGSRIVSRKPNPEEGN*
Ga0070717_105389663	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LKSTAYNAVTLVWIGYLKQEPQLMPTLEAKDVAAFSLALATSPPVSDPDASFMLRVEQAVDRVLSRNNWPMPTADGSRIVGRKPHPEEGN*
Ga0075029_1005322382	3300006052	Watersheds	TLVWIGYLKRQPQLVPRVQAVANSNPLGLAFAGSANIPDPDAGFMLRVEQAVDRVLSRNDWPRPSTNGSRVVGRKPNPEEGN*
Ga0075014_1004691512	3300006174	Watersheds	SIELILVSLVMRYGNGQEAIVSLVKSTAYNAVTLVWIGYLRHQRHLVPRVEPVMSTAGPGFDLVTSTGVPHPDAGFMLRVEQAVDRVLSRSDWPRPAADGSRIVSRKPTPEERN*
Ga0070765_1001576681	3300006176	Soil	SVELILVSFVMWYGNGQPAIISLLKSTAYNAVTLVWIGYLKQQPQLVPRVEAATNENAIGMAWAASGAMPVPDAGFMLRVEQAVDRVLSRSDWPRPTAQGSRIVSRKPNPEEGN*
Ga0075521_101697831	3300006642	Arctic Peat Soil	VVAWFGDSHGATISLLKSTAYNAVTLVWIGYLRQEPQLVPRVEPAMNPNTLGMALATSGAVPDPDASLMLRVEQAVDRVLSRGDWPRPSTRGSRIVSRKPNPEEGN*
Ga0066660_108888161	3300006800	Soil	GVFASVELILVSIVMLYGNGQPAIISLLKSTAYNAVTLVWIGYLKQQPQLVPKLEAVPNANTFGMAWAASAPVPDPDASFMLRVEQAVDRVLSRSDWPRPIANGPRIVSRKPNPEEGN*
Ga0099828_103144811	3300009089	Vadose Zone Soil	LVSIVMWHGNGQAAIVSLLKSTAYNAVTLVWIGYLKQQPQAVPKIEAATYANTFGMALAASAAVQDPDAGFMLRVEQAVDRVLSRSDWPRPSTKGSQIVSRKPNPEEGN*
Ga0116126_12702531	3300009640	Peatland	FGVFASVELILVSFVTWYGDGQAAMISLLKSTAYNAVTLVWIGYLKQQPQLVPKVEAATHANTLGMALSTVPAVSDPDASFMLRVEQAVDRVLSRSDWPRPAAEGSRVVSRKPNPEESN*
Ga0116106_10082531	3300009645	Peatland	KSTVYNAVTLVWIGYLKQQPQLVPKVEAATHANTLGMALSTVPAVSDPDASFMLRVEQAVDRVLSRSDWPRPAAEGSRVVSRKPNPEESN*
Ga0116217_106420072	3300009700	Peatlands Soil	RYGGSQEATLSLVKSTAYNVVTLVWIGYLIQQPQLVPKLSAVANANPFGMALATSAAVPDDAGYMLRIEQAVDRVLSRGDWPRPTTQGSRIVGRKPNPEEGN*
Ga0074044_100271099	3300010343	Bog Forest Soil	LILVSFVMWYGDGQAAIISLLKGTTYNAVTLVWIGYLKQQPQLVPKIEAATNTNTLGLALSTVPAVSDPDASFMLRVEQAVDRVLSRSDWPRPAAQGSRIVSRKPNPEESN*
Ga0074044_109363172	3300010343	Bog Forest Soil	WYGNGQGAIISLLKSTAYNAVTLVWIGYLRQQPQLVPQVEPASSANTLGMALSTAAAVSDPDAGFMWRIEQAVDRVLSRSDWPRPIAEGSRIVSRKPHPEESN*
Ga0126360_10170311	3300010854	Boreal Forest Soil	QLVPRLEAVPSAHTFDMALAASAAVPDPDASFMLRVEQAVDRVLSRSDWPRPIATGSRIVSRKPNPEEGN*
Ga0138538_10163371	3300011056	Peatlands Soil	VKSTAYNVVTLVWIGYLIQQPQLVPKLSAVANANPFGMALATSAAVPDDAGYMLRIEQAVDRVLSRGDWPRPTTQGSRIV
Ga0138583_10454511	3300011060	Peatlands Soil	GQAAMISLLKSTAYNAVTLVWIGYLKQQPQLVPKVEAATNANTRGLALSTVPAVSDPDASFMLRVEQAVDRVLSRSDWPRPAAQGSRIVSRKPNPEESN*
Ga0138534_10401661	3300011061	Peatlands Soil	GVFASVQLILVSFLIRYGGSQEATLSLVKSTAYNVVTLVWIGYLIQQPQLVPKLSAVANANPFGMALATSAAVPDDAGYMLRIEQAVDRVLSRGDWPRPTTQGSRIVGRKPNPEEGN*
Ga0150983_132515602	3300011120	Forest Soil	VFASVELILVSFVMWYGNGQEAVISLLKSTAYNAVTLVWIGYLKQQPRLVPKLEAAPTANTFGMALAGPAAVADPDASFMLRVEQAVDRVLSRSDWPRPNTEGSRIISRKPSPEEGN*
Ga0137392_101173125	3300011269	Vadose Zone Soil	VPKIEAATYANTFGMALAASAAVQDPDAGFMLRVEQAVDRVLSRSDWPRPSTKGSQIVSRKPNPEEGN*
Ga0137391_107554851	3300011270	Vadose Zone Soil	TVVWIGYLRQQSQLLPRLEAATNANAFGMAWAGSPAVPDPDASFMLRVEQAVDRVLSRSDWPRPTAKGSRIVGRKPNPEEGN*
Ga0137393_112910792	3300011271	Vadose Zone Soil	YGNGQPAIISLLKSTAYNAVTLVWIGYLQQQPQLVPRVEAATNENTIGMAWAASGAMPVPDASFMLRVEQAVDRVLSRSDWPRPTAQGSRIVSRKPNPEEGN*
Ga0137388_105233433	3300012189	Vadose Zone Soil	WIGYLRQQSQLLPRLEAATNANAFGMAWAGSPAVPDPDASFMLRVEQAVDRVLSRSDWPRPTAKGSRSVGRKPNPEEGN*
Ga0137388_112226291	3300012189	Vadose Zone Soil	AIISLLKSTAYNAVTLVWIGYLQQQPQLVPRVEAATNENTIGMAWAASGAMPVPDASFMLRVEQAVDRVLSRSDWPRPTAQGSRIVSRKPNPEEGN*
Ga0137382_100885896	3300012200	Vadose Zone Soil	LYGNGQPAIVSLLKSTAYNAVTLVWIGYLKQQPQLVPRLEALPRANALGMEWATSAAVPDPDASFMLRVEQAVDRVLSRSDWPRPIAQGSRIVGRKPNPEEGN*
Ga0137363_105496083	3300012202	Vadose Zone Soil	GQPAIISLLKSTAYNAVTLVWIGYLKQQPQLVPKLEAVSNANTFGMAWAASAPVPDADASFMLRVEQAVDRVLSRSDWPRPIANGPRIVSRKPNPEEGN*
Ga0137363_111263451	3300012202	Vadose Zone Soil	FASVELILVSIVMLYGNGQPAIISLLKTTAYNAVTLVWIGYLKQQPQLVPKLEAVPNAHTFGMALAASAPVPDPDASFMLRVEQAVDRVLSRSDWPRPTTTGSRIVSRKPNPEEGN*
Ga0137362_102007701	3300012205	Vadose Zone Soil	PTLEAATNPNTPGLAWATSAAVSDPDAGFMLRVEQAVDRVLSRSDWPRPIAQGSRIVSRRPNPEEGN*
Ga0137376_102608585	3300012208	Vadose Zone Soil	GYLKQQPQLVPKLEAVPKPNALGMEWATSAAVPDPDASFMLRVEQAVDRVLSRSDWPRPIAQGSRIVGRKPNPEEGN*
Ga0137378_115913112	3300012210	Vadose Zone Soil	ILVSIVMLYGNGQPAIISLLKSTAYNAVTLVWIGYLKQQPQLVPKLEAVPNANTFGMAWAASAPVPDPDASFMLRVEQAVDRVLSRSDWPRPIANGPRIVSRKPNPEEGN*
Ga0137360_112336772	3300012361	Vadose Zone Soil	VWIGYLKRQPELVPRIEAAPSAHTFGMGLAASAPVPEPDASFMLRVEQAVDRVLSRSDWPRPIANGPRIVSRKPNPEEGN*
Ga0137361_107429073	3300012362	Vadose Zone Soil	AVTLVWIGYLKQQPQLVPKLEAVSNANTFGMAWAASAPVPDADASFMLRVEQAVDRVLSRSDWPRPIANGPRIVSRKPNPEEGN*
Ga0137361_110236862	3300012362	Vadose Zone Soil	VELILVSFVMWYGNGQPAIISLLKSTAYNAVTLVWIGYLKQQPQLVPKLEAVPRPNALDMEWATSAAVPDPDASFMLRVEQAVDRVLSRSDWPRPIAQGSRIVSRKPNPEEGN*
Ga0137395_107987332	3300012917	Vadose Zone Soil	SVELILVSFVLWSGHNGHAAIIRLLKSTAYNAVTVVWIGYLRQQSQLLPRLEAATNANAFGMAWAGSPAVPDPHASFRLRVEQAVDRVLSRSDWPRPIAQGSRIVSRKPNPEEGN*
Ga0137395_108106742	3300012917	Vadose Zone Soil	ELILVSFVLWCGNNGRAAIISLLKSTAYNAVTLVWIGYLKQQPQLVPRLEALPRANALGMEWATSAALPDPDASFMLRVEQAVDRVLSRSDWPRPMANGPRIVSRKPNPEEGN*
Ga0137396_111297171	3300012918	Vadose Zone Soil	ELILVSIVMLYGNGQPAIISLLKSTAYNAVTLVWIGYLKQQPQLVPKLEAVPRPNALGMEWATSAAVPDPDASFMLRVEQAVDRVLSRSDWPRPIAQGSRIVGRKPNPEEGN*
Ga0137404_120144362	3300012929	Vadose Zone Soil	ASVELILVSVVMWYGDTQPAIISLLKSTAYNAVTLVWIGYLKQQPQLVPKVEIAGNTNTLGTALAAFPAVLDPDASFMFRVEQAVDRVLARSDWPRSNIKGSRIVSRKPYPEEDN*
Ga0181523_101316264	3300014165	Bog	ASVELILVSIVMVYGNSHAATISLLKSAAYNAVTLVWIGYLRQQPERVPGIEAALPNGSLGMVLATSPAMTDPDEGFMLRVEQAVDRVLSRSDWPRPATEGSRLVGRKPNPEEGN*
Ga0181526_100449951	3300014200	Bog	LRQQPERVPGIEAALPNGSLGMVLATSPAMTDPDEGFMLRVEQAVDRVLSRSDWPRPATEGSRLVGRKPNPEEGN*
Ga0181522_106807121	3300014657	Bog	ELILVSFVMWYGNSQAAIISLLKSTAYNAVTLVWIGYLKQHPHLVPKVEAATNANTLGMALSTSTAVLDPDASFMLRVEQAVDRVLSRSDWPRPDAQGPRIVSRKPNPGERN*
Ga0167661_10263031	3300015167	Glacier Forefield Soil	VPQVEATITTSTFTMALAGSGAMSDPDASFMLKVEQAVDRVLSRSDWPRPTTKGNRIVSRKPNPEEGN*
Ga0187818_105895181	3300017823	Freshwater Sediment	SFVMWYGNSHGAIISLLKSTAYNAVTLVWIGYLKQEPQLVPRVEPGGNTNPLGMALATSGVAFDSDAGFMLRIEQAVDRVLSRSDWPRPAVQGSRIVSRKPNPEEGN
Ga0187814_100644564	3300017932	Freshwater Sediment	PKLLPRVIPMPASPRGMVLAASVAVPDPDAGFMLRVEQAVDRVLSRSDWPRPMTNGPQIVSRKPNPEEGN
Ga0187808_103697962	3300017942	Freshwater Sediment	ALGFGVFASVELILVSILMRHGQCQVAMISLVKSTAYNAVTLVWIGYLQRQAHLVPKLVPATNGDALGMVLATSAAVPDPDSGFMLRIEQAVDRVLSRSDWPRPTATGSRIISRKPNPEEQN
Ga0187817_101357771	3300017955	Freshwater Sediment	AYNAVTLVWIGYLKQQPKLLPRVIAMPVSPRGMVLAASAAVPDTDAGFMLRVEQAVDRVLSRSDWPRPVTNGPQIVSRKPNPEEGN
Ga0187780_110938941	3300017973	Tropical Peatland	SIVMRYGSGQEAVISLLKSTAYNAVTVVWIGYLKQEPQSVPAVAAAANGNTLGMALATSAGVPDPDAGFMLRIEQAVDRVLSRSDWPRPTANGSRIVSRKPNPEEGN
Ga0187804_100228601	3300018006	Freshwater Sediment	NAVTLVWIGYLKQQPKLLPRVIAMPASPRGLVLASAAVPDPDAGFMLRVEQAVDRVLSRSDWPRPMTNGPQIVSRKPNPEEGN
Ga0187805_100227376	3300018007	Freshwater Sediment	FGVFASVELILVSFVMRYGSAQATTISLVKSTAYNAVTVVWIGYLQRQAHLVPKLVPATNGDALGMVLATSAAVPDPDSGFMLRIEQAVDRVLSRSDWPRPTATGSRIISRKPNPEEQN
Ga0187888_11173954	3300018008	Peatland	LVPEVEAATHANTLAMALSTATAAPDPDASFMLRVEQAVDRVLSRSDWPRPAAEGSRVVSRKPNPEESN
Ga0187887_101308521	3300018043	Peatland	TLVWIGYLKQQSQLVPSVEPAPNTITNEMAMAGPGALCDPDSGFMLRVEQAVDRVLSRSDWPRPATSGNRIVSRKPKPEEGN
Ga0210407_100708361	3300020579	Soil	QEAVVSLLKSTAYNAVTLVWIGYLKQQPQLVPRVEAATHANTIGIAWAASGAVPDPDASFMLRVEQAVDRVLSRSDWPRPTAKGSRIVSRKPNPEEGN
Ga0210399_104930161	3300020581	Soil	IFASVELILVSVVMWHGTGQGAMISLVKGMAYNAVTLLWISYLKQQPQLVPTVEATNANNRGMALASSGPVPDPDAGFMLRVEQAVDRVLSRSDWPRPNAQGSRIVGRKPNPEEGN
Ga0210401_102544311	3300020583	Soil	WYGNGQPAIISLLKSTAYNAVTLVWIGYLKQQPQLVPRVEAATNENAIGMAWAASGAMPVPDAGFMLRVEQAVDRVLSRSDWPRPTAQGSRIVSRKPNPEEGN
Ga0210404_101863583	3300021088	Soil	VEAATHANTIGIAWAASGAVPDPDASFMLRVEQAVDRVLSRSDWPRPTAKGSRIVSRKPNPEEGN
Ga0210387_118945291	3300021405	Soil	LGFGVFASVELILVSFVMWNGRDHAATISLLKSSAYIAVTFIWIGYLRQEPQLVPRVEAIMGGNPLGMTFATPGGIPDSDAGFMTRVEQAVDRVLSRSDWPRPPEDGTRVVSRKPRPEEL
Ga0193709_10521133	3300021411	Soil	STAYNAVTLVWIGYLKQQPQLVPWVEAATNENTIGMAWAPSGAMPVPDASFMLRVEQAVDRVLSRSDWPRPNAQGSRIVSRKPNPEEGN
Ga0210402_116006711	3300021478	Soil	LVPRVEAATHANTIGIAWAASGAVPDPDASFMLRVEQAVDRVLSRSDWPRPTAKGSRIVSRKPNPEEGN
Ga0210410_112314872	3300021479	Soil	FASTELILVSVVMRYGSAQAAMISLLKSTAYNAVTLVWIGYLKQQQQLVPKLEAATYANTLGLASAATAVWDPDAGFMLRVEQAVDRVLSRGDWPRPSTKGSRIVSRKPNHEEGN
Ga0222729_10053804	3300022507	Soil	SVELILVSFVMWYGNGQPAIISLLKSTAYNAVTLVWIGYLKQQPQLVPRVEAATNENAIGMTWAASGAMPVPDPGFMLRVEQAVDRVLSRSDWPRPTAQGSRIVSRKPNPEEGN
Ga0242663_11042282	3300022523	Soil	AYNAVTLVWIGYLKQQPQLVPRVEAATNENTIGMTWVASGAMPVPDAGFMLRVEQAVDRVLSRSDWPRPTAQGSRIVSRKPNPEEGN
Ga0242661_10820562	3300022717	Soil	RYGSAQAAMISLLKSTAYNAVTLVWIGYLKQQQQLVPKLEAATYANTLGLASAATAVWDPDAGFMLRVEQAVDRVLSRGDWPRPSTKGSRIVSRKPNHEEGN
Ga0242666_10389371	3300022721	Soil	LILVSVVMRYGSAQAAMISLLKSTAYNAVTLVWIGYLKQQQQLVPKLEAATNANTLGFASAATAVWDPDAGFMLRVEQAVDRVLSRGDWPRPSTLGSRIVSRKPNHEESN
Ga0242665_102298061	3300022724	Soil	AIISILKSTAYNAVTLVWIGYLKQQPQLVPRVEAATNANTIGIAWAASGAVPDPDASFMLRVEQAVDRVLSRSDWPRPTAKGSRIVSRKPNPEEGN
Ga0224561_10114812	3300023030	Soil	LLKSTAYNAVTLVWIGYLKQQPHLVPKLEATANANVFGMALATSAAVMDPDAGFMLRVEQAVDRVLSRSDWPRPITDGTRIVGRKPNPEEGN
Ga0224551_10699931	3300023259	Soil	ILVSVVMRYGSAQGAIISLLKSTAYNAVTLVWIGYLRQQPQLVPKVVAATNANTLGLASAASAAVSDPDAGFMLRVEQAVDRVLSRGDWPRPSTIGSRIVSRKPNHEEGN
Ga0137417_10320304	3300024330	Vadose Zone Soil	YNAFTLVWIGYLKRQPQLVPRIEAAPSAHTFGMALAASAPVPDPDASFMLRVEQAVDRVLSRSDWPRPTTTGSRIVSRKPNPEEGN
Ga0209584_100885561	3300025878	Arctic Peat Soil	LSVVAWFGDSHGATISLLKSTAYNAVTLVWIGYLRQEPQLVPRVEPAMNPNTLGMALATSGAVPDPDASLMLRVEQAVDRVLSRGDWPRPSTRGSRIVSRKPNPEEGN
Ga0209838_10795252	3300026214	Soil	SLLKSLAYNAVTLVWIGYLKQQPQLVPSLEPAPSTITNGMAVAGPAALCDPDSGFMLRVEQAVDRVLSRSDWPRPATSGNRIVSRKPNPEEGN
Ga0209839_100492551	3300026294	Soil	VPQVEAAMTASTFSMALAGSGAMPDPDASFMLKVEQAVDRVLSRSDWPRPSTKGNRIVGRKPNPEEGN
Ga0257172_10583551	3300026482	Soil	AAIVSLLKSTAYNAVTLVWIGYLKQQPQAVPKIEAATYANTFGMALAASAAVQDPDAGFMLRVEQAVDRVLSRSDWPRPSTKGSQIVSRKPNPEEGN
Ga0257157_10701302	3300026496	Soil	TAYNAVTLVWIGYLKQQLQLVPRVEAATNENTIGMAWATSGAMPVPDASFMLRVEQAVDRVLSRSDWPRPTAQGSRIVSRKPNPEEGN
Ga0257165_10333471	3300026507	Soil	GVFASVELILVSIVMWHGNGQAAIVSLLKSTAYNAVTLVWIGYLKQQPQAVPKIEAATYANTFGMALAASAAVQDPDAGFMLRVEQAVDRVLSRSDWPRPSTKGSQIVSRKPNPEEGN
Ga0257161_10410121	3300026508	Soil	YNAVTLVWIGYLKQQLQLVPRVEAATNENTIGMAWATSGAMPVPDASFMLRVEQAVDRVLSRSDWPRPIAQGSRIVGRKPNPEEGN
Ga0257158_10411273	3300026515	Soil	GNGQPAIVSLLKSTAYNAVTLVWIGYLKQQPQLVPKLEAVPRANALGMEWATSVAVPDPDASFMLRVEQAVDRVLSRSDWPRPIAQGSRIVGRKPNPEEGN
Ga0209116_10204204	3300027590	Forest Soil	LKQQPHLVPKVEAATNANSLGMALSTSTAVLDPDASFMLRVEQAVDRVLSRSDWPRPDAQGSRIVGRKPNPEESN
Ga0209733_10175561	3300027591	Forest Soil	GNAHAAIISLLKSTAYNAVTLVWIGYLKQAQLVSNVGAVTNMNTLGMPLASSAAASDPDAGFMLRVEHAVDRVLSRSDWPKPSTKGSRIVGRKPNPEEGN
Ga0208324_10054268	3300027604	Peatlands Soil	YNAVTLVWIGYLKQQPQLVPKVEAATNANTRGLALSTVPAVSDPDASFMLRVEQAVDRVLSRSDWPRPAAQGSRIVSRKPNPEESN
Ga0209625_10127031	3300027635	Forest Soil	LGFGVFASVELILVSFVMWYGNGQPAIISVLKSTAYNAVTLVWIGYLKQQPQLVPRVEAATNENTIGMAWAASGAMPVPDASFMLRVEQAVDRVLSRSDWPRPTAQGSRIVSRKPNPEEG
Ga0209217_11845682	3300027651	Forest Soil	AAMISLLKSTAYNAVTLLWIGYLRRQPQLVPKLVADPNPNTFGMPLAASATVPDPDAGFMLRVEQAVDRVLARSDWPRPIAHGSRIVSRKPNPEEGN
Ga0209773_102518501	3300027829	Bog Forest Soil	QAAIISLLKSTAYNAVTLVWIGYLKQQPQLVPQVEPASNASTLGMALSMTGAVSDPDAGFMWRIEQAVDRVLSRSDWPRPMTDGSRIISRKPNPEEGN
Ga0209580_101186111	3300027842	Surface Soil	NAHAAIISLLKSTAYNAVTLVWIGYLKQAQSVSNVDAVTNMNTFGMPLASSAAASDPDAGFMLRVEQAVDRVLSRGDWPRPSTKGSRIVGRKPNPEEGN
Ga0209274_101951283	3300027853	Soil	NAVTVVWIGYLKQQPQMVPKVEPATNAKALGMALTVSGAVSDLDAGFMLRVEQAVDRVLSRSDWPRSIATGSRIVSRKPKPEESN
Ga0209166_102559221	3300027857	Surface Soil	VVPRLEEATHADTLALAWATSAAGPDPDANFMLRVEQAVDRVLSRSDWPRPSAQGSRIVSRKPNPEEGN
Ga0209590_106691941	3300027882	Vadose Zone Soil	GFGVFASVELILVSFVMWYGNGQEAVISLLKSTAYNAVTLVWIGYLKQQPQLVPRVEAATHENTLGMAWATSGAVPDPDASFMLRVEQAVDRVLSRSDWPRPTAKGSRIVSRKPNPEEGN
Ga0209583_103086031	3300027910	Watersheds	VVMWYGDGQGAIISLLKSTAYNAVTLVWIGYLKQQPQRVPQVEAATHANSFGMAFAGSSVVPDPDAGFMLRVEQAVDRVLSRNDWPRPSTKGSRIVSRKPNPEEGN
Ga0209698_101572755	3300027911	Watersheds	YGNGQEAIVSLVKSTAYNAVTLVWIGYLRHQRHLVPRVEPVMSTAGPGFDLVTSTGVPHPDAGFMLRVEQAVDRVLSRSDWPRPAADGSRIVSRKPTPEERN
Ga0209698_101573651	3300027911	Watersheds	ILVSAVVWLGNSHAASISLVKSLAYNAVTLGWIGYLKQQPQLVPNVEAVTNANTLGMALATSAAVSDPDAGFMLRVEQAVDRVLSRGDWPRPSTKGSRIVSRKPNPEEGN
Ga0209526_109266691	3300028047	Forest Soil	QLVPKLEAAPNVNTFGMALATSAAVPDRDASFMFRVEQAVDRVLSRSDWPRPTSQGSRIVSRKPNPEEGN
Ga0302201_100523544	3300028785	Bog	LILVSVVMRFGDGQGALISLLKSTAYNAVTLVWIGYLKQQPQMVPAVEATGTAYTNDLALAAGWDPDAGFMLRVEQAVDRVLSRSDWPRPSTSGTRIVSRKPNPEEGN
Ga0302189_101998132	3300028788	Bog	AVISLVKSLAYNAVTLVWIGYLKQQAQLVPSIEPARNTITNEMAMAGPAALCDADSGFMLRVEQAVDRVLSRSDWPRPATSGNRIVSRKPNPEEGN
Ga0265338_111337822	3300028800	Rhizosphere	KSAAYNAVTLVWIGYLKQQPQLVPQVEATITMSTFTMALAGSGAMSDPDASFMLKVEQAVDRVLSRSDWPRPTTKGNRIVSRKPNPEEGN
Ga0302155_100160291	3300028874	Bog	LGFGVFASVELILVSVVMRFGDGQGALISLLKSTAYNAVTLVWIGYLKQQPQMVPAVEATGTAYTNDLALAAGWDPDAGFMLRVEQAVDRVLSRSDWPRPSTSGTRIVSRKPNPEEGN
Ga0311327_101528961	3300029883	Bog	LVPSVEPAPNTITNEMAMAGPGALCDPDSGFMLRVEQAVDRVLSRSDWPRPATSGNRIVSRKPKPEEGN
Ga0311362_101395436	3300029913	Bog	LKQQAQLVPSIEPARNTITNEMAMAGPAALCDADSGFMLRVEQAVDRVLSRSDWPRPATSGNRIVSRKPNPEEGN
Ga0311358_109134631	3300029915	Bog	NAVTLVWIGYLKQQSQLVPSVEPAPNTITNEMAMAGPGALCDPDSGFMLRVEQAVDRVLSRSDWPRPATSGNRIVSRKPKPEEGN
Ga0311326_102446873	3300029917	Bog	YLKQQSQLVPSVEPAPNTITNEMAMAGPGALCDPDSGFMLRVEQAVDRVLSRSDWPRPATSGNRIVSRKPKPEEGN
Ga0302143_11049611	3300029918	Bog	FASVELILVSVVMRFGDGQGALISLLKSTAYNAVTLVWIGYLKQQPQMVPAVEATGTAYTNDLALAAGWDPDAGFMLRVEQAVDRVLSRSDWPRPSTSGTRIVSRKPNPEEGN
Ga0311328_102705971	3300029939	Bog	GVFASVELILVSVVMRFGDGHAAVISLVKSLAYNAVTLVWIGYLKQQAQLVPSIEPARNTITNEMAMAGPAALCDADSGFMLRVEQAVDRVLSRSDWPRPATSGNRIVSRKPNPEEGN
Ga0311365_117083181	3300029989	Fen	SIELLLLSFVMWRGDGHADGISLLKGTAYNVITLVWIGYLKQQPHLVPRVEAIPRATTFAMALATSAELPDPDASFMLRVEQAVDRVLSRHDWPRPSTTGSRIVGRKPNPEEGN
Ga0311348_105963521	3300030019	Fen	GTAYNVITLVWIGYLKQQPHLVPRVEAIPRPANFAMALAASAELPDPDAGFMLRVEQAVDRVLSRHDWPRPSTTGSRIVGRKPNPEEGN
Ga0265459_105520051	3300030741	Soil	IISLLKSTAYNAVTLVWIGYLKQQPHLVPKVEAATNANSLGMALSTSTAVLDPDASFMLRVEQAVDRVLSRSDWPRPDAQGSRIVGRKPNPEESN
Ga0265767_1096701	3300030836	Soil	QQPQRVPRVEATANANPLGMTLATSAGIPDPDAGFMLRVEQAVDRVLSRSDWPRPASDGSRIVSRKPKPEEGN
Ga0075374_110699141	3300030855	Soil	RVEAATHENTLGMAWATSGAVPDPDASFMLRVEQAVDRVLSRSDWPRPTAKGSRIVSRKPNPEEGN
Ga0073994_122929861	3300030991	Soil	GFGIFASAELILVSVVMWHGTGQGAMISLLKGMAYNAVTLLWISYLKQQPQLVPTVEATNANNLGMALASSGAVPDPDAGFMLRVEQAVDRVLSRSDWPRPNAQGSRIVSRKPNPEEGN
Ga0073994_123269943	3300030991	Soil	HAAIISLLKSTAYNAVTLVWIGYLKQEPQLVPKVEAATKANTLGMAFAMPNAVMDPDAGFMLRVEQAVDRVLSRSDWPRPTAKGSRIVSRKPNPEEGN
Ga0073995_119944071	3300031047	Soil	PQLVPRVEAATNENTIGMAWATSVAMPVPDASFMLRVEQAVDRVLSRSDWPRPTAQGSRIVSRKPNPEEGN
Ga0170834_1020534071	3300031057	Forest Soil	LGFGVFASVELILVSIVMWYGDGHASTISLLKSTAYNAVTLVWISYLKQEPQLMPTLEAKDAAAFSLALATSPPVSDPDASFMLRVEQAVDRVLSRNNWPMPTAEGSRIVGRKPHPEEGN
Ga0170822_112929191	3300031122	Forest Soil	LGHGHAAISLLKSASYNGVTLVWIGYLKQQQQVVPEVEATANANTLDMALAGLGAMPDPDANFMSRVEQAVDRVLSRSDWPRPSTKGSRIVSRKPNPEEGN
Ga0302323_1000066741	3300031232	Fen	LSFVMWRGDGHADGISLLKGTAYNVITLVWIGYLKQQPHLVPRVEAIPRATTFAMALATSAELPDPDASFMLRVEQAVDRVLSRHDWPRPSTTGSRIVGRKPNPEEGN
Ga0265328_101568131	3300031239	Rhizosphere	EAGATANHLGLAFVEGADPDAGFMLRVEQAVDRVLSRSDWPRPAADGPRIVGRRPNPEEG
Ga0302318_101442043	3300031258	Bog	AYNAVTLVWIGYLKQQSQLVPSVEPAPNTITNEMAMAGPGALCDPDSGFMLRVEQAVDRVLSRSDWPRPATSGNRIVSRKPKPEEGN
Ga0170819_123262131	3300031469	Forest Soil	VSFVLLYGNGYETAISLLKSAAYNAVTLVWIGYLSQQPQRVPKLVPVMHAKPLGMTLATSVGVSEANAGFMLRVEQAVDRVLSRSDWPRPTAKGSRIVSRKPNPEEGN
Ga0310686_1129234326	3300031708	Soil	ASVELILVSVVMWSGTGQAALISLLKGTAYNASTVLWIVYLKQQPQRVPRVEATANANPLGMTLATSAGIPDPDAGFMLRVEQAVDRVLSRSDWPRPASDGSRIVSRKPKPEEGN
Ga0307474_103228363	3300031718	Hardwood Forest Soil	ASTISLLKSTAYNAVTLVWIGYLKQEPQLMPTLEAKDVPAFGLALATSPPVSDPDASFMLRVEQAVDRVLSRNNWPMPTADGSRIVGRKPHPEEGN
Ga0307477_103611613	3300031753	Hardwood Forest Soil	YNAVTVVWIGYLKQQPQLVPRLEAVMNANTFDMAWATSGAAPDPDASFMLRVEQAVDRVLSRSDWPRPTAKGSRIVSRKPNPEEGN
Ga0307475_103925891	3300031754	Hardwood Forest Soil	KSTAYNAVTLVWIGYLKQQPQLVPRLEAVTNANTFDMAWAASGAVPDPDASFMLRVEQAVDRVLSRSDWPRPTAKGSRIVSRKPNPEEGN
Ga0307479_104421571	3300031962	Hardwood Forest Soil	SVELILVSFVMWYGNGQEAAVSLLKSTAYNAVTLVWICYLKQQPQLVPKLETVPNANPFGMALAASPAMPDPDAGFMLRVEQAVDRVLARSDWPRPIARGSRIVSRKPNPEEGN
Ga0307479_106199233	3300031962	Hardwood Forest Soil	VSFVMWYGNGQEAVVSLLKSTAYNAVTLVWIGYLKQQPQLVPRVEAATHANTIGMAWAASGALPDPDASFMLRVEQAVDRVLSRSDWPRPTAKGSRIVSRKPNPEEGN
Ga0307479_118478432	3300031962	Hardwood Forest Soil	NAVTLVWIAYLKQQPQLVPRFEVATNANTVGMAWAASPAVPDPDASFMLRVEQAVDRVLSRSDWPRPTADGSRIVSRKPNPEEGN
Ga0348332_121263742	3300032515	Plant Litter	GYLKQQPHLVPRVEAATNAKTLGMVLSASTAVSDPDASFMLRVEQAVDRVLSRSDWPRPDAQGSRIVSRKPNPEESN
Ga0335085_113038362	3300032770	Soil	QQPHLVPQVEAATIPNTLGVAFAASPAVPDPDASFMLRVEQAVDRVLSRSDWPRPSTKGGRIVSRKPYPEESN
Ga0335078_123448742	3300032805	Soil	ILVSVVMWHGDGQVAIISLLKSAAYNAVTLVWIGYLNQQPQLVPKIEPATNTNTLGVTLAASPAMPDPDASFMLRVEQAVDRVLSRSDWPRPNTKGGRIVGRKPYPEESN
Ga0335080_108582873	3300032828	Soil	LPSLEALPYGNPMGAALATSGDVSDPDTSFMLRVEQAVERVLSRSDWPRPVTNGSRIVSRKPHLEEGN
Ga0326726_106322804	3300033433	Peat Soil	PQLVPNVEPVTNANTLGMALATSAAVPDPDTGFMLRVEQAVDRVLSRGDWPRPSTKGSRIVSRKPNPEEGN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F058360

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences