Metagenome / Metatranscriptome Family F058345

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F058345
Family Type	Metagenome / Metatranscriptome
Number of Sequences	135
Average Sequence Length	78 residues
Representative Sequence	VDPTPSLLSFGEAIALVRQRLNASSERAAAVVREALKSGELHIIRDDHVDPISGSLFAIVEEDFLAWLNRHVATQATTP
Number of Associated Samples	74
Number of Associated Scaffolds	135

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	72.13 %
% of genes near scaffold ends (potentially truncated)	82.22 %
% of genes from short scaffolds (< 2000 bps)	86.67 %
Associated GOLD sequencing projects	62
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (77.037 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (37.778 % of family members)
Environment Ontology (ENVO)	Unclassified (68.148 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.259 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 39.25% β-sheet: 8.41% Coil/Unstructured: 52.34%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 135 Family Scaffolds
PF11272	DUF3072	4.44
PF07769	PsiF_repeat	2.22
PF02653	BPD_transp_2	1.48
PF13356	Arm-DNA-bind_3	0.74
PF00313	CSD	0.74
PF04226	Transgly_assoc	0.74
PF00196	GerE	0.74
PF13493	DUF4118	0.74
PF13202	EF-hand_5	0.74
PF12158	DUF3592	0.74
PF00589	Phage_integrase	0.74
PF09361	Phasin_2	0.74
PF02518	HATPase_c	0.74

COG ID	Name	Functional Category	% Frequency in 135 Family Scaffolds
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.04 %
All Organisms	root	All Organisms	22.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.04 %
cellular organisms	root	All Organisms → cellular organisms	22.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.04 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	22.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.04 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	17.04 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.04 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	14.81 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.04 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.93 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.22 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.48 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.04 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.22 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.22 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	2.22 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.48 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.74 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.74 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.04 %
Rhizobiales bacterium 64-17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 64-17	2.22 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.22 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.22 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.48 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.74 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.74 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.04 %
Rhizobiales bacterium 64-17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 64-17	2.22 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.22 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.22 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.48 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.74 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.74 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.04 %
Rhizobiales bacterium 64-17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 64-17	2.22 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.22 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.22 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.48 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.74 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.74 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005187\|Ga0066675_10396323	Not Available	1018	Open in IMG/M
3300005332\|Ga0066388_100851029	Not Available	1497	Open in IMG/M
3300005332\|Ga0066388_103905483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	760	Open in IMG/M
3300005332\|Ga0066388_105782762	Not Available	625	Open in IMG/M
3300005332\|Ga0066388_106345961	Not Available	596	Open in IMG/M
3300005332\|Ga0066388_106740638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 64-17	578	Open in IMG/M
3300005332\|Ga0066388_107786950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 64-17	536	Open in IMG/M
3300005332\|Ga0066388_108431832	Not Available	513	Open in IMG/M
3300005363\|Ga0008090_15742583	Not Available	1204	Open in IMG/M
3300005560\|Ga0066670_10169604	Not Available	1291	Open in IMG/M
3300005569\|Ga0066705_10273167	Not Available	1072	Open in IMG/M
3300005764\|Ga0066903_104223860	Not Available	768	Open in IMG/M
3300005764\|Ga0066903_104278202	Not Available	763	Open in IMG/M
3300005764\|Ga0066903_106531197	Not Available	607	Open in IMG/M
3300006032\|Ga0066696_10486226	Not Available	810	Open in IMG/M
3300006086\|Ga0075019_10347004	Not Available	901	Open in IMG/M
3300006175\|Ga0070712_100565005	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300010048\|Ga0126373_10407179	Not Available	1386	Open in IMG/M
3300010048\|Ga0126373_10815937	All Organisms → cellular organisms → Bacteria	995	Open in IMG/M
3300010048\|Ga0126373_11833884	Not Available	670	Open in IMG/M
3300010360\|Ga0126372_11189885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 64-17	786	Open in IMG/M
3300010361\|Ga0126378_10301556	Not Available	1705	Open in IMG/M
3300010361\|Ga0126378_10541450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1279	Open in IMG/M
3300010361\|Ga0126378_10890264	Not Available	997	Open in IMG/M
3300010361\|Ga0126378_10974652	Not Available	952	Open in IMG/M
3300010366\|Ga0126379_10243447	All Organisms → cellular organisms → Bacteria	1765	Open in IMG/M
3300010366\|Ga0126379_12215257	Not Available	650	Open in IMG/M
3300010366\|Ga0126379_13680249	Not Available	514	Open in IMG/M
3300010376\|Ga0126381_100481805	All Organisms → cellular organisms → Bacteria	1746	Open in IMG/M
3300010376\|Ga0126381_100492059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1728	Open in IMG/M
3300010376\|Ga0126381_103074372	Not Available	662	Open in IMG/M
3300010398\|Ga0126383_10819536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	1014	Open in IMG/M
3300012971\|Ga0126369_13353436	Not Available	525	Open in IMG/M
3300016270\|Ga0182036_11189481	Not Available	634	Open in IMG/M
3300016270\|Ga0182036_11663984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	538	Open in IMG/M
3300016319\|Ga0182033_10568464	Not Available	982	Open in IMG/M
3300016319\|Ga0182033_11329751	Not Available	646	Open in IMG/M
3300016319\|Ga0182033_11463781	Not Available	616	Open in IMG/M
3300016319\|Ga0182033_12182344	Not Available	505	Open in IMG/M
3300016341\|Ga0182035_10150586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1786	Open in IMG/M
3300016341\|Ga0182035_11400894	Not Available	628	Open in IMG/M
3300016357\|Ga0182032_10195375	All Organisms → cellular organisms → Bacteria	1536	Open in IMG/M
3300016357\|Ga0182032_11235361	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	644	Open in IMG/M
3300016357\|Ga0182032_11301736	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	627	Open in IMG/M
3300016371\|Ga0182034_11910119	Not Available	524	Open in IMG/M
3300016387\|Ga0182040_10849929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	754	Open in IMG/M
3300016387\|Ga0182040_11807703	Not Available	523	Open in IMG/M
3300016404\|Ga0182037_10130208	All Organisms → cellular organisms → Bacteria	1866	Open in IMG/M
3300016422\|Ga0182039_10299805	Not Available	1331	Open in IMG/M
3300016422\|Ga0182039_11207412	Not Available	683	Open in IMG/M
3300016422\|Ga0182039_11676091	Not Available	581	Open in IMG/M
3300016445\|Ga0182038_10347925	Not Available	1227	Open in IMG/M
3300016445\|Ga0182038_10488654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1048	Open in IMG/M
3300016445\|Ga0182038_11393586	Not Available	628	Open in IMG/M
3300021560\|Ga0126371_11730552	Not Available	748	Open in IMG/M
3300025915\|Ga0207693_10573543	Not Available	879	Open in IMG/M
3300026550\|Ga0209474_10090724	All Organisms → cellular organisms → Bacteria → Proteobacteria	2078	Open in IMG/M
3300026859\|Ga0207859_1015374	Not Available	669	Open in IMG/M
3300026942\|Ga0207783_1028633	Not Available	550	Open in IMG/M
3300027703\|Ga0207862_1034184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1529	Open in IMG/M
3300027898\|Ga0209067_10440534	Not Available	734	Open in IMG/M
3300031545\|Ga0318541_10868810	Not Available	503	Open in IMG/M
3300031564\|Ga0318573_10472095	Not Available	675	Open in IMG/M
3300031572\|Ga0318515_10656205	Not Available	556	Open in IMG/M
3300031572\|Ga0318515_10690498	Not Available	540	Open in IMG/M
3300031668\|Ga0318542_10670133	Not Available	542	Open in IMG/M
3300031713\|Ga0318496_10756031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	536	Open in IMG/M
3300031719\|Ga0306917_10414824	Not Available	1052	Open in IMG/M
3300031736\|Ga0318501_10472260	Not Available	682	Open in IMG/M
3300031744\|Ga0306918_10117967	Not Available	1918	Open in IMG/M
3300031744\|Ga0306918_10856822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	709	Open in IMG/M
3300031744\|Ga0306918_11184897	All Organisms → cellular organisms → Bacteria → Proteobacteria	590	Open in IMG/M
3300031744\|Ga0306918_11507179	Not Available	514	Open in IMG/M
3300031771\|Ga0318546_10008756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	5264	Open in IMG/M
3300031771\|Ga0318546_10432921	Not Available	920	Open in IMG/M
3300031782\|Ga0318552_10612302	Not Available	556	Open in IMG/M
3300031833\|Ga0310917_10337873	Not Available	1021	Open in IMG/M
3300031879\|Ga0306919_10251376	Not Available	1330	Open in IMG/M
3300031879\|Ga0306919_10879094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	687	Open in IMG/M
3300031890\|Ga0306925_10322178	Not Available	1661	Open in IMG/M
3300031890\|Ga0306925_10492028	All Organisms → cellular organisms → Bacteria → Proteobacteria	1307	Open in IMG/M
3300031894\|Ga0318522_10405464	Not Available	517	Open in IMG/M
3300031897\|Ga0318520_10216221	Not Available	1135	Open in IMG/M
3300031910\|Ga0306923_11196877	Not Available	812	Open in IMG/M
3300031912\|Ga0306921_10426210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1547	Open in IMG/M
3300031941\|Ga0310912_10320332	Not Available	1201	Open in IMG/M
3300031942\|Ga0310916_10209525	Not Available	1633	Open in IMG/M
3300031942\|Ga0310916_10929558	Not Available	728	Open in IMG/M
3300031942\|Ga0310916_10967580	Not Available	711	Open in IMG/M
3300031942\|Ga0310916_11030531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	686	Open in IMG/M
3300031945\|Ga0310913_10044084	Not Available	2890	Open in IMG/M
3300031945\|Ga0310913_10060497	Not Available	2494	Open in IMG/M
3300031946\|Ga0310910_10865798	Not Available	710	Open in IMG/M
3300031946\|Ga0310910_10956688	Not Available	670	Open in IMG/M
3300031947\|Ga0310909_10966713	Not Available	697	Open in IMG/M
3300031947\|Ga0310909_11262192	Not Available	595	Open in IMG/M
3300031947\|Ga0310909_11428005	Not Available	553	Open in IMG/M
3300031954\|Ga0306926_11214109	Not Available	885	Open in IMG/M
3300031954\|Ga0306926_11998033	Not Available	652	Open in IMG/M
3300031954\|Ga0306926_12846258	Not Available	521	Open in IMG/M
3300031981\|Ga0318531_10517098	Not Available	541	Open in IMG/M
3300032001\|Ga0306922_10412107	Not Available	1446	Open in IMG/M
3300032025\|Ga0318507_10364310	Not Available	630	Open in IMG/M
3300032035\|Ga0310911_10564975	Not Available	660	Open in IMG/M
3300032039\|Ga0318559_10508453	Not Available	562	Open in IMG/M
3300032041\|Ga0318549_10223489	Not Available	847	Open in IMG/M
3300032041\|Ga0318549_10237827	Not Available	819	Open in IMG/M
3300032051\|Ga0318532_10214359	Not Available	683	Open in IMG/M
3300032060\|Ga0318505_10051914	Not Available	1759	Open in IMG/M
3300032076\|Ga0306924_10336407	All Organisms → cellular organisms → Bacteria	1731	Open in IMG/M
3300032091\|Ga0318577_10202733	Not Available	949	Open in IMG/M
3300032094\|Ga0318540_10216940	Not Available	923	Open in IMG/M
3300032094\|Ga0318540_10616061	Not Available	523	Open in IMG/M
3300032261\|Ga0306920_100494447	Not Available	1815	Open in IMG/M
3300032261\|Ga0306920_102597300	Not Available	694	Open in IMG/M
3300032261\|Ga0306920_103292226	Not Available	602	Open in IMG/M
3300033289\|Ga0310914_10555553	Not Available	1037	Open in IMG/M
3300033289\|Ga0310914_10677238	Not Available	926	Open in IMG/M
3300033289\|Ga0310914_11000383	Not Available	736	Open in IMG/M
3300033289\|Ga0310914_11340143	Not Available	618	Open in IMG/M
3300033290\|Ga0318519_10004368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	5156	Open in IMG/M
3300033290\|Ga0318519_10991493	Not Available	521	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.52%
Aquatic	Environmental → Aquatic	1.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.52%
Sediment	Environmental → Aquatic → Sediment	1.48%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	86.67%
Loam	Environmental → Terrestrial → Soil → Loam	11.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.48%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	68.15%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.07%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.37%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.48%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	37.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	30.37%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	14.07%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	10.37%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.70%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.48%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026859	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 25 (SPAdes)	Environmental	Open in IMG/M
3300026942	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 63 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066675_103963231	3300005187	Soil	VTGRLLSFGEAIALIRQRLNASSGRAAAVVCEALKSGELRIVRDDHIDPISGSLFAIVEEDFLAWLNRQVSTTATTPLAPRKQPDRE*
Ga0066388_1008510294	3300005332	Tropical Forest Soil	MPEHLVHSVSTRTGRTRLLSFGEAIRQRLNASSGRAAAVVREALQSGELRIIRDDHIDPMSGSLFAIVEEDFLDWLNRQVSATAATPLAARVQPDRER
Ga0066388_1039054831	3300005332	Tropical Forest Soil	VDPTPSLLSFGEAIALVRWRLNLSSGRAAAVVREALKSGVRIIRDDHIDPISSSLFAIVKEDFLDWLNRQVASHATTPQA
Ga0066388_1057827621	3300005332	Tropical Forest Soil	LLSFGEAIALVRQRLNVSSGRAAAVVREALKSGVRIIRDDHIDPISSSLFAIVEENFLDWLNRQVATQATTP
Ga0066388_1063459612	3300005332	Tropical Forest Soil	VDPTPSLLSFGEAITQVRQRLNASSERAATVVREALKSGELHIIRDEHVDPISGSQFAIVEEDFLDWLN
Ga0066388_1067406382	3300005332	Tropical Forest Soil	MADRDAVLVLTSRTESPAAVDPMLSLLSFGEAIALVRQRLTASSGRAAAVIREALKSGELRMVRDDHIDPISGSLFAIVAEEFLVWLNRQVSTTATTPL
Ga0066388_1077869502	3300005332	Tropical Forest Soil	MADRDATSRTESPAAADPTPSLLSFGEAIALVRQRLNASSGRAAAVIREALKSGELRIVRDDHIDPISGSLFAIVAEEFLVWLNRQ
Ga0066388_1084318321	3300005332	Tropical Forest Soil	VDPTPSLLSFGEAITLVRQRLSASSEKAAVVVREALKSGELHIIRDEHVDPISGSQFAIVEEDFLEWLNRQVATQATTP
Ga0008090_157425831	3300005363	Tropical Rainforest Soil	MTERCGPNTPSLLSFGEAIELVRQRLNASSARAAAVVREALKSGELHITRDDHIDPVSGSLFAIVEEDFL
Ga0066670_101696042	3300005560	Soil	VTGRLLSFGEAFALIRQRLNASSGRAAAVACEALKSGELRIVRDDHIDPISGSLFAIVEEDFLAWLNRQVSTTATTPLAPRKQPDRE*
Ga0066705_102731671	3300005569	Soil	VTGRLLSFGEAIALIRQRLNASSGRAAAVVCEALKSGELRIVRDDHIDPISGSLFAIVEEDFLAWLNRQVSTTATTPLA
Ga0066903_1015195803	3300005764	Tropical Forest Soil	VDPTPSLLSFGEAIALVRQRLNVSGRRAAAVVREALKSGELQILRDDHIDPISSSLFAIVEKDFLDWLNRHVVAQATTPQAARPDRERVRQAAIEL*
Ga0066903_1042238603	3300005764	Tropical Forest Soil	VDPTPSLLSFGEAIALIRQRLNVSSDKAAAVVREALKSGELHIIRDEHVDPISGSQFAIVEEDF
Ga0066903_1042782021	3300005764	Tropical Forest Soil	VDPTPSLLSFGEAITLIRQRLNASSEIAVAVVREALKSGELRIIRDDHVDPISGSQFAIVEENFLDWLNRQVATQATTPLAKPVYFC*
Ga0066903_1065311974	3300005764	Tropical Forest Soil	VASLLSFGEAIALVRQRLNVSSGRAAEVIREALKSRELRIIRDDHIDPISSSLFAIVEEDFLNWL
Ga0066696_104862262	3300006032	Soil	MLSFGKAIALVRQRLNASSGRAAAVVCEALKSGELRIVRDDHIDPISGSLFAIVEEDFLAWLNRQVSTTATTPLAPRKQPDRE*
Ga0075019_103470041	3300006086	Watersheds	VTGRTPLLSFGKAIALVGQCLNASSGRAAAAVREALKSGELRIIRDDHIDPISGSLFAIVEEDFLDWLNHQVSTTVTTP
Ga0070712_1005650053	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LLSFGEAIALVRQRLNVSSGRAAAVVREALKSGELRSIRDNHIDPISGSLFAIVEEDFLDWLNRQVSTTATTPLA
Ga0126373_104071791	3300010048	Tropical Forest Soil	VDPTPSLLSFGQAIALVCQRLNVSTGRAAAVVREALKSGELRIIRDDHIDPISSSLFAIVEK
Ga0126373_108159371	3300010048	Tropical Forest Soil	VDRTPSSLSFGEAITLVRQRLNASSERAAVVVREALKSGELHIIRNEHVDPISGSQFAIVEEDFLEWLNRQVA
Ga0126373_118338841	3300010048	Tropical Forest Soil	LLSFGEAITLVRQRLNASSEKAAVVVREALKSGELHIIRDEHVDPISGSQFAIVEEDFLEWLNRQVATQATTPQPTRKPD
Ga0126372_111898851	3300010360	Tropical Forest Soil	MTGRTSLLSFAEAIALVRQRLNASSGRAAEVVREALKSGELRIIRDNHIDPISGSLFAIVEQDFLDWL
Ga0126378_103015561	3300010361	Tropical Forest Soil	VDPTPSLLSFGQAIALVCQRLNVSTGRAAAVVREALKSGKLRIIRDDHIDPISSSLFAIVEKDFLDWL
Ga0126378_105414502	3300010361	Tropical Forest Soil	LLSFGEAITLVRQRLNASSEKAAVVVREALKSGELHIIRDEHVDPISGSQFAIIEEDFLEWLNRQVATQATTPQPTRKPDRERVRQ
Ga0126378_108902641	3300010361	Tropical Forest Soil	MLSFAEAIALVRERLDASSGRAAAVVREALKSGELRIIRDDHIDPISGSLFAIVEQDFLDWL
Ga0126378_109746521	3300010361	Tropical Forest Soil	VDPTPSLLSFGEVITLVRQRLNASSEKAAVVVREALKSGELHIVRDEHVDPISGSQFAIVEENF
Ga0126378_132853851	3300010361	Tropical Forest Soil	LLSFGEAIVLVRQRLNVSSGRAAAVIREALKSGELRIIRDDHIDPISSSIFAIVEEDFLDWLNRQVVAQATTPQAARTPDRERAKQGASELWGT
Ga0126379_102434474	3300010366	Tropical Forest Soil	LLSFGEAITLVRQRLNASSEKAAVVVREALKSGELHIIRDEHVDPISGSQFAIVEEDFLEWLNRQVATQATTPQ
Ga0126379_122152573	3300010366	Tropical Forest Soil	LLSFGEAIALVRWRLNLSSGRAAAVVREALKSGGRIIRDDHIDPISSSLFAIVEKDFLDWLNR
Ga0126379_136802491	3300010366	Tropical Forest Soil	LLSFGEAIALVRQRLNVSSGRAAALVREALKSGVRIIRDDHIDPISSSLFAIVEKDLLDWLSRQVATPATTLQTSRKQPDREL
Ga0126381_1004818051	3300010376	Tropical Forest Soil	LLSFGEAITLVRQRLNVSSGRAAAVVREALKSGVRIIRDDHIDPISSSLFAIVKEDFLDW
Ga0126381_1004920591	3300010376	Tropical Forest Soil	LLSFGEAIALVRWRLNLSSGRAAAVVREALKSGVRIIRDDHIDPISSSLFAIVKEDFLDWLNRQVASHATTPQAARKQPDRERVRQAA
Ga0126381_1030743722	3300010376	Tropical Forest Soil	LLSFGEVITLVRQRLNASSERAAAVVREALKSGELHIIRDEHVDPISGSQFAIVEEDFL
Ga0126383_104910011	3300010398	Tropical Forest Soil	LLSFGEAITLVRQRLNASSEKAAVVVREALKSGELHIVRDEHVDPISGSQFAIVEENFLEWLNRHVATQATTPQPTRKPDRERVRQAAIELW
Ga0126383_108195361	3300010398	Tropical Forest Soil	LLSFGEAITLVRQRLNASSEKAAAVIREALKSGELRIIRDDHVDAISGSQFAIVERNILDWLNRQVATQA
Ga0126369_133534361	3300012971	Tropical Forest Soil	VDQAWPSPASKDNAVDPTPSLLSFGEAIALVRQRLNVSGRRAAAVVREALKSGELQILRDDHIDPISSSLFAIVEKDFLDWLNRHVVAQATTPQAARP
Ga0182036_111894811	3300016270	Soil	LLSFGKAIALVRQRLNASSGRAAAVVREALKSGELRIIREHHIDPISGSLFAIVEEDFFDWLNRQVSITATTPLAARKQPDRERARQAAI
Ga0182036_116639842	3300016270	Soil	MLSFAEAIALVRQRLNASSGRAAAIVREALKSGELRITRDDHIDPISGSLFAIVEQDFLDWLKRQVSTTATTSLAAKQPDRERARQ
Ga0182033_105684641	3300016319	Soil	VDPPPSLLSFGEAIELVRQRLNASSARAAAVVREALKSGELHITRDDHIDPVSGSLFAIVEEDFLNWLN
Ga0182033_113297511	3300016319	Soil	LLSFGEAIALVRERLNVSSERAAAVVREALKSGQLHIIRDDHVDPISGSQFAIIEEGFPDWLNRQVA
Ga0182033_114637812	3300016319	Soil	VDPTPSFLSFGEAITLVRQHLNANNERAMAVVREALKSGELRIIRDDHVDPISGSEFAVVEENFLDWLNRQVATQATT
Ga0182033_121823441	3300016319	Soil	VDPMPSLLPFGETIALIRQRLNVSSEKAAAVIREALKSGELHIIRDDHVDPISGSQFAIVERDFLDWLNRQVATQATTP
Ga0182035_101505861	3300016341	Soil	VDPPPSLLSFGEAIELVRQRLNASSARAAAVVREALKSGELHITRDDHIDPVSGSLFAIVEEDFLNWLNRQVATT
Ga0182035_114008941	3300016341	Soil	VDPTPSLLSFGEAITLVRQRLNASSEKAAAVIREALKLGELHIIRDDHVDPISGSQFAIVEEDFLDWLNRQVAT
Ga0182032_101953754	3300016357	Soil	MLSFGEAITLVRQRLNVSSGRAAAVVRDALKSGELRIIRDDHIDPISGSLFAIVEEDFLDWLNRQVSTTAATPRKQPDRERARQAAIKLW
Ga0182032_112353611	3300016357	Soil	MSKRSVSTRTGRTRLLSFGEAIALVRQRLNASSGRAAAVVREVLKSGELRIIREHHIDPISGSL
Ga0182032_113017362	3300016357	Soil	LLSFGKAIALVCQRINASSGRAAAVVREALKSGELRIIRDDHINPMSGSLFAIVEEDFL
Ga0182032_119250912	3300016357	Soil	VDPVPSLLSFGEVIAVVRQRLNVSSGRAAALVREALKLGALRIIRDDHIDPISSSLFAIVEKDLLDWLSRQVDTHATTPQTSRMQPDRELARQAAIELWGT
Ga0182034_119101192	3300016371	Soil	MRCTAADTQKESAVDPTPSLLSFGEAIALVHQRLNVSSGRAAAVVREALKSGELRIIRDNHIDPISSSLFAIVKEDFLDWLNRQMASHATTPQAARKQPDR
Ga0182040_108499293	3300016387	Soil	VDPTPSLLSFGEAIALVHQRLNVSSGRAAAVVREALKSGELRIIRDNHIDPISSSLFAIVEADFLDWLNRQVAAHATPPQAARPD
Ga0182040_118077031	3300016387	Soil	PSLLSFGQAIALVCQRLNVSTGKAAAVVRGALKSGELRIIRDDHIDPISSSLFAIVEKDFLDWLNRHVAAHATTPQAAHKQS
Ga0182037_101302082	3300016404	Soil	VDPPPSLLSFGEAIELVRQRLNASSARAAAVVREALKSGELHITRDDHIDPVSGSLFAIVEEDFLNWLNRQVAT
Ga0182039_102998053	3300016422	Soil	NAVDPTPSLLSFGEVITLVRQRLNASSEKAAVVVREALKSGELHIVRDEHVDPISGSQFAIVEENFLEWLRPARSKSA
Ga0182039_112074123	3300016422	Soil	VDPTPSLLSFGEAIALVRQRLNVSSGRAAAVVREALKSHELRIIRDDHIDPISSSLFAIVEKDFLDWL
Ga0182039_116760911	3300016422	Soil	VDPTPSLLPFGETIALIRQRLNVSSEKAAAVIREALKSGELHIIRDDHVDPISGSQFAIVERDFLDWLNRQVATQATTPLAKPKQPDR
Ga0182038_103479251	3300016445	Soil	VDPTPSLLSFGEAIALVRQRLNASSERAAAVVREALKSGELHIIRDDHVDPISGSLFAIVEEDFLAWLNRHVATQATTP
Ga0182038_104886541	3300016445	Soil	VKGSQLSFGEAIALVRQRLNVSSERAAAVVREALKSGELHIIRDDHVDPISGSQFAMIEEDFPDWLNRQVATTPQVARKPDRERA
Ga0182038_113935863	3300016445	Soil	LLSFGEAIALVRQRLNVSSERAVAVVREALKSGELHIIRDDHVDPISGSQFAIIEEDFLDWLNRQVATQATAP
Ga0126371_117305522	3300021560	Tropical Forest Soil	LLSFGETIALVRQRLNVSSERAAAVVRDALKSGELHIIRDDHVDPISGSQFAIVEEDFLDWLNR
Ga0207693_105735431	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	LLSFGEAIALVRQRLNVSSGRAAAVVREALKSGELRSIRDNHIDPISGSLFAIVEEDFLDWLNHQVSTTVPRMRVLEG
Ga0209474_100907243	3300026550	Soil	LLSFGEAFALIRQRLNASSGRAAAVVCEALKSGELRIVRDDHIDPISGSLFAIVEEDFLAWLNRQVSTTATTPLAPRKQPDRE
Ga0207859_10153741	3300026859	Tropical Forest Soil	MTDCLDPTPSLLSFGEAIALIRQRLNVSSDKAAAVVRDALKSGELYIIRDDHVDPISGSQFAIVEEDFLDWLNRQVAAQATTPQVTR
Ga0207783_10286331	3300026942	Tropical Forest Soil	VDPTPSLLSFGEAITLVRQRLNASSEKAAAVIRGALKSGELRIIRDDHVDAISGSQFAIVERDFLDWLNRQVATEA
Ga0207862_10341841	3300027703	Tropical Forest Soil	LLSFGEAIALVRQRLNASSGRAAAVVREALKSGELRIIRDDHIDPISGSLFAIVEEDFLDWLNRHVSTTAT
Ga0209067_104405342	3300027898	Watersheds	LLSFGKAIALVGQCLNASSGRAAAAVREALKSGELRIIRDDHIDPISGSLFAIVEEDFLDWL
Ga0318541_108688102	3300031545	Soil	VDPTPSLLSFGEAIALVRQRLNVSSGRAAAVVREALKSHELRIIRDDHIDPISSSLFAIVEKDFLDWLNRHVAAHATTPQATRKPDRERARQAAIELW
Ga0318573_104720952	3300031564	Soil	VTGRTRLLSFGEAIAVVRQRLNASSGRAAIVVREALKSGELRIIRDDYIDPISGSLFAIVEEDFLDWLNRQVST
Ga0318515_106562051	3300031572	Soil	VTGRTRLLSFGEAIAVVRQRLNASSGRAAIVVREALKSGELRIIRNDYIDPISGSLFAIVEEDFLDWLNRQVSTTATTPLAARKQPD
Ga0318515_106904982	3300031572	Soil	VDPTPSLVSFGEVITLVRQRLNASSEKAAVVVREALKSGELHIVRDEHVDPISGSQFAIVEEDFLDWLNRQVATQATTPQPTRKP
Ga0310915_100008461	3300031573	Soil	VDPTSSLLSFGEAITLVHQRLNASSERAAAVVREALKSGEVRIIRDDHVDAISGSQFAIVERDFLDWLNRQVATQATTPLAKPKQPDRERARQA
Ga0318542_106701331	3300031668	Soil	VDPTPSLLSFGEAIALIRQRLNVSSEKAAAVVRDALKSGELYIIRDDHVDPISGSQFAIVEEDFLDWLNRQVA
Ga0318496_107560311	3300031713	Soil	LLSFGKAIALVCQRLNASRGRAAAVVREALKSGELRIIRDDHIDPMSGSLFAIVEEDFLD
Ga0306917_104148241	3300031719	Soil	VDPPPSLLSFGEAIELVRQRLNASSARAAAVVREALKSGELHITRDDHIDPVSGSLFAIVEEDFLNWLNRQVA
Ga0318501_104722601	3300031736	Soil	LLSFGEAIALVRQRLNTSSGRAAAVVREALKSGELRIIRDDHIDPISGSLFAIVEDDFLDWLNRQVSTTATTPLAALPVRERVR
Ga0306918_101179674	3300031744	Soil	VDPTPSLLSFGEAIALVRQRLNVSSGRAAEVIREALKSRELRIIRDDHIDPISSSLFAIVEEDFLGWLNRHASTTATTPPAARKQPDREL
Ga0306918_108568222	3300031744	Soil	LLSFGEAIALVRQRLNASSGRAAAVVREALKSGELRIIRDDHIDPMSGSLFAIVEEDFLDWL
Ga0306918_111848972	3300031744	Soil	VDPTPSLLSFGEAITLVRQRLNASSERAAAVVREALKSGELRIIRDDHVDPISGSQFAVVEENFLDWLNRQVATQ
Ga0306918_115071792	3300031744	Soil	VDPTPPLLSFGEAIALVRQRLNVSSGRAAAVVREALKSHELRIIRDDHIDPISSSLFAIVEKDFLDWLNRHVAAHATTPQATRKPDRER
Ga0318509_108029552	3300031768	Soil	VDPTPSLLSFGEAITLVRQRLNASSERAAAVVREALKSGELHIIRDEHVDPISGSQFAIVEEDFLDWLNRQVATQATTSQPTRKPDRERARQAA
Ga0318546_100087561	3300031771	Soil	VDPTSSLLSFGEAITLVHQRLNASSERAAAVVREALKSGEVRIIRDDHVDAISGSQFAIVERDFLDWLNRQVATQATTPLAKPKQPD
Ga0318546_104329211	3300031771	Soil	VDPTPSLLSFGEAIALVRQRLNVSSGRAAAVVREALKSHELRIIRDDHIDPISSSLFAIVERDFL
Ga0318552_106123022	3300031782	Soil	VDPTPSLLSFGEAIALVRQRLNVSSGRAAEVIREALKSRELRIIRDDHIDPISSSLFAIVEEDFLNWLNRHASITATTPQAARKQPDREL
Ga0318523_101414341	3300031798	Soil	VDPTPSLLSFGEAIALIRQRLNVSSEKAAAVVRDALKSGELYIIRDDHIDPISGSLFAIVEEDFFNWLNRQVATTLQATPKQPDRERVRRAAIEL
Ga0318567_108711492	3300031821	Soil	VDPTPSLLSFGEAIALVRQRLNVSSGRAAEVIREALKSRELRIIRDDHIDPISSSLFAIVEEDFLNWLNRHASTTAITPQDARKQPDRELVRQA
Ga0310917_103378731	3300031833	Soil	VDPPPSLLSFGEAIELVRQRLNASSARAAAVVREALKSGELHITRDDHIDPVSGSLFAIVEEDFLNWLNRQVATTLAS
Ga0306919_102513762	3300031879	Soil	MLSFAEAIALVRERLNASSGRAAAIVREALKSGELRITRDDHIDPISGSLFAIVEEDFLEWLNRQVAT
Ga0306919_108790941	3300031879	Soil	VTGRTPLLSFGKAIALVCQRINASSGRAAAVVREALKSGELRIIRDDHIDPISGSLFAIVEQ
Ga0306925_103221781	3300031890	Soil	VDPTPSLLSFGEAITLVRQRLNASSERAAAVVREALKSGELHIIRDEHVDPISGSQFAIVEED
Ga0306925_104920284	3300031890	Soil	VDPTPSLLPFGETIALIRQRLNVSSEKAAAVIREALKSGELHIIRDDHVDPISGSQFAIVERDFLDWLNRQVATQATTPLAKPKQPDRERA
Ga0318522_104054641	3300031894	Soil	VDPTPSLLSFGEAIALVRQRLNVSSGRAAEVIREALKSRELRIIRDDHIDPISSSLFAIVEKDFLDWLNRHVAAHATTPQ
Ga0318520_102162212	3300031897	Soil	VDPTPSLLSFGEAIALVRQRLNVSSGRAAAVVREALKSHELRIIRDDHIDPISSSLFAIVEKDFLDWLNRHVAAHATTPQATR
Ga0306923_111968773	3300031910	Soil	VDPTPSLLSFGEAIALVRQRLNVSSGRAAAVVREALKSHELRIIRDDHIDPISSSLFAIVEKDFLDWLNRHVAAHA
Ga0306921_104262104	3300031912	Soil	VDPTPSLLSFGEAIALVRQRLNVSSGRAAAVVREALKSHQLRIIRDDHIDPISSSLFAIVEKDFLDWLNRHVAAHATTPQATES
Ga0310912_103203323	3300031941	Soil	VDPTPSLLSFGETIALIRQRLNVSSERAAAVVRDALKSGELHIIRDDHVDPISGSQFAIVEEDFLDWLNRQVATQATTP
Ga0310916_102095254	3300031942	Soil	VDPTPSLLSFGEVITLVRQRLNASSERAAAVVREALKSGELHIIRDEHVDPISGSQFAIVEEDFLDWLNRQVATQATTSQPT
Ga0310916_109295581	3300031942	Soil	VDPTPSLLSFGKAITLVRQRLNASGEKAAVVVREALKSGELHIIRDEHVDPTSGSQFAIVEEDFLEWLN
Ga0310916_109675802	3300031942	Soil	MLSFAEAIALVRQRLNASSGRAAAVVREALKSGELRIIRDDHIDPISGSLFAIVEQDFLDWLNRQVTPLAARKP
Ga0310916_110305311	3300031942	Soil	MLSFAEAIALVRERLNASSGRAAAIVREALKSGELRITRDDHIDPISGSLFAIVEED
Ga0310916_111466302	3300031942	Soil	VDPTPSLLSFGEAIALVRQRLNSSSERAAAVVREALKSGELHIIRDDHIDPISGSLFAIVEEDFLDWLNRHVATQATTPQPARKPDRERARQAAIELW
Ga0310913_100440846	3300031945	Soil	VDPTPSLLSFGEAITLVRQRLNASSERAAAVVREALKSGELHIIRDEHVDPISGSQFAIVEEAFLDWLMRY
Ga0310913_100604975	3300031945	Soil	VDPTPSLLSFGEAIALVRQRLNVSSGRAAAVVREALKSHELRIIRDDHIDPISSSLFAIVEKDFLDWLNRHVAAHATTPQATRKPD
Ga0310910_107673653	3300031946	Soil	VDPTPSLLSFGEVITLVRQRLNASSERAAAVVREALKSGELHIIRDEHVDPISGSQFAIVEEDFLDWLNRQVATQATTPQPTRKPDRELARQAAIE
Ga0310910_108657982	3300031946	Soil	MLSFAEAIALVRERLNASSGRAAAVVREALKSGELRITRGDLDSFAIVEQDFLDWLKRQVSTTVTTPLAA
Ga0310910_109566882	3300031946	Soil	VDPTPSLLSFGEAIALIRQRLNVSSEKAAAVVRDALKSGELYIIRDDHIDPISGSQFAIVEEDFLDWLNRQVATQATTPQV
Ga0310909_109667131	3300031947	Soil	INKLKVKGSQLSFGEAIALVRQRLYVSSERAAAVVREALKSGELHIIRDDHVDPISGSQFAMIEEDFPDWLNRQVATTPQVARSRVQKM
Ga0310909_112621922	3300031947	Soil	VDPTPSLLSFGEAIALVRQRLNVSSGRAAAVVREALKSHELRIIRDDHIDPISSSLFAIVEKDFLDWLNRHVAAHATTPQATES
Ga0310909_114280052	3300031947	Soil	VDPTPSLLSFGEAITLVRQRLNASSERAAAVVREALKSGELRIIRDDHVDPISGSQFAVVEENFLDWL
Ga0306926_112141091	3300031954	Soil	VDPTPSLLSFGEAITLVRQRLNASSEKAAAVIREALKLGELHIIRDDHVDPISGSQFAIVEEDFL
Ga0306926_119980331	3300031954	Soil	MGRIPLLSFGEAIALVRQRLNASSGRAAAVVREALKSCELRIIDDHIDPISGSLFAIVEKDFLDWLNRHVSTTAT
Ga0306926_128462581	3300031954	Soil	MLSFAEAIALVRERLNASSGRAAAVVREALKSGELRITRGDLDSFAIVEQDFLD
Ga0318531_105170981	3300031981	Soil	VDPTPSLLSFGEAIALVRQRLNASSERAAAVVREALKSGELHIIRDEHVDPISGSQFAIVEEDFLDWLNRQVATQATTPQPTRKPDRERARQAAIEL
Ga0306922_104121071	3300032001	Soil	VDPTPSLLSFGEVITLVRQRLTASSEKAAVVVREALKSGELHIVRDEHVDPISGSQFAIVEENFLEWLNRQVATQATTPQPTRKPDRE
Ga0318507_103643101	3300032025	Soil	MLSFAEAIALVRQRLNASSGRAAAVVREALKSGELRIIRDDHIDPMSGSLFAIVEEDFLDWLNRHCDH
Ga0310911_105649752	3300032035	Soil	VDPTPSLLSFGEAITLVRQRLNASSEKAAAVVREALKSGELHIIRDEHVDPISGSQFAIVEGDFLEWLNRQVATQATPPQPTRKPDRE
Ga0318559_105084531	3300032039	Soil	VDPTPSLLSFGEVITLVRQRLNASSERAAAVVREALKSGELHIIRDEHVDPISGSQFAIVEEDFLDWLNR
Ga0318549_102234892	3300032041	Soil	VDPTPSLLSFGEAITLVRQRLNASSERAAAVVREALKSGELHIIRDEHVDPISGSQFAIVEEDFLDWL
Ga0318549_102378273	3300032041	Soil	VDPTSSLLSFGEAITLVHQRLNASSERAAAVVREALKSGEVRIIRDDHVDAISGSQFAIVERDFLDWLN
Ga0318532_101604241	3300032051	Soil	LLSFGEAIALVRERLNVSSERAAAVVREALKSGQLHIIRDDHVDPISGSQFAIIEEGFPDWLNRQVATQATTPQRKPDRERIRQAAIELWG
Ga0318532_102143591	3300032051	Soil	LLSFGEAIALVRQRLNTSSGRAAAVVREALKSGELRIIRDDHIDPINGSLFAIVEEDFLDWLNRQVSATATTPVAAQP
Ga0318533_1000317020	3300032059	Soil	VDPTPSLLSFGEAIALVRQRLNVSSERAAAVVREALKSGELHIIRDDHVDPISGSQFAIIEEDFLDWLNRQVATTPQVARKPDRERARHAAI
Ga0318505_100519145	3300032060	Soil	VDPTPSLLSFGEVITLVRQRLNASSEKAAVVVREALKSGELHIVRDEHVDPISGSQFAIVEE
Ga0306924_103364072	3300032076	Soil	VDPPPSLLSFGEAIELVRQRLNASSARAAAVVREALKSGELHITRDDHIDPVSGSLFAIVEEDFLNWLNRQVATTLA
Ga0318577_102027331	3300032091	Soil	VDPTPSLLSFGEAIALVRQRLNVSSGSAAALVREALKSGVRIIRDDHIDPISSSLFAIVEKDFLDWPSRQVA
Ga0318540_102169401	3300032094	Soil	VDPTPSLLSFGEAIALVRQRLNVSSGRAAAVVREALKSHELRIIRDDHIDPISSSLFAIVEKDFLDWLNRH
Ga0318540_106160612	3300032094	Soil	VDPTPSLLSFGQAIALVCQRLNVSTGKAAAVVRGALKSGELRIIRDDHIDPISSSLFAIVEKDFLDWLNRHVAAHATTPQAAHKQS
Ga0306920_1004944475	3300032261	Soil	VDPTPSLLSFGEAIALIRQRLNVSSEKAAAVVRDALKSGELYIIRDDHVDPISGSQFAIVEEDFLDWL
Ga0306920_1025973001	3300032261	Soil	VDPTPSLLSFGEAIALVRQRLNVSSGRAAAVVREALKSHELRIIRDDHIDPISSSLFAIVEKDFLDWLNRHVAAHATTPQA
Ga0306920_1032922261	3300032261	Soil	VDPTPSLLSFGEAIALVRQRLNVSSGRAAEVIREALKSRELRIIRDDHIDPISSSLFAIVEEDFLGWLNRHASTTATTPPAARKQPDRELV
Ga0310914_105555532	3300033289	Soil	MLSFGEAIALVCQRLNASSGRAAAVVRDALKSGELRIIRDDHIDPISGSLFAIVEEDFLDWLNRQASTTATTPQVVRK
Ga0310914_106772382	3300033289	Soil	VDPTPSLLSFGEAIALVRQRLNVSSGRAAEVIREALKSRELRIIRDDHIDPISSSLFAIVEEDFLGWLNRH
Ga0310914_110003831	3300033289	Soil	VDPMPSLLPFGETIALIRQRLNVSSEKAAAVIREALKSGELHIIRDDHVDPISGSQFAIVERDFLDWLNRQVATQATTPLAKP
Ga0310914_113401431	3300033289	Soil	VDPTPSLLSFGEAITLVRQRLNASSEKAAAVIREALKLGELHIIRDDHVDPISGSQFAIVEEDFLDWLNRQV
Ga0318519_100043686	3300033290	Soil	VDPTSSLLSFGEAITLVHQRLNASSERAAAVVREALKSGEVRIIRDDHVDAISGSQFAIVERDFLDWL
Ga0318519_101002681	3300033290	Soil	VDPTPSLLSFGEAIELVRQRLNASSARAAAVVREALKSGELHITRDDHIDPISGSLFAIVEEDFLNWLNRQVATTLQATPKQSDRERVRRAAIE
Ga0318519_109914931	3300033290	Soil	LLSFGEAIALVRQRLNTSSGRAAAVVREALKSGELRIIRDDHIDPISGSLFAIVEDDFLDWLN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F058345

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences