Metagenome / Metatranscriptome Family F058294

Basic Information
Family ID	F058294
Family Type	Metagenome / Metatranscriptome
Number of Sequences	135
Average Sequence Length	41 residues
Representative Sequence	MTKHDEARRAFLLGAAVGAGAVAGATLVPDALAQTHE
Number of Associated Samples	119
Number of Associated Scaffolds	135

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	98.51 %
% of genes near scaffold ends (potentially truncated)	99.26 %
% of genes from short scaffolds (< 2000 bps)	94.07 %
Associated GOLD sequencing projects	115
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Most Common Taxonomy
Group	Bacteria (65.185 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (37.037 % of family members)
Environment Ontology (ENVO)	Unclassified (42.963 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (40.000 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 52.31% β-sheet: 0.00% Coil/Unstructured: 47.69%
Feature Viewer

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Pfam ID	Name	% Frequency in 135 Family Scaffolds
PF02738	MoCoBD_1	11.11
PF03401	TctC	11.11
PF05685	Uma2	1.48
PF07690	MFS_1	1.48
PF01977	UbiD	1.48
PF00563	EAL	1.48
PF02668	TauD	1.48
PF03992	ABM	1.48
PF02826	2-Hacid_dh_C	1.48
PF00687	Ribosomal_L1	1.48
PF13442	Cytochrome_CBB3	0.74
PF13505	OMP_b-brl	0.74
PF03929	PepSY_TM	0.74
PF13450	NAD_binding_8	0.74
PF07521	RMMBL	0.74
PF00296	Bac_luciferase	0.74
PF13460	NAD_binding_10	0.74
PF01135	PCMT	0.74
PF00589	Phage_integrase	0.74
PF07992	Pyr_redox_2	0.74
PF02163	Peptidase_M50	0.74
PF01593	Amino_oxidase	0.74
PF02768	DNA_pol3_beta_3	0.74
PF00583	Acetyltransf_1	0.74
PF13410	GST_C_2	0.74
PF00582	Usp	0.74
PF00106	adh_short	0.74

COG ID	Name	Functional Category	% Frequency in 135 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	11.11
COG0081	Ribosomal protein L1	Translation, ribosomal structure and biogenesis [J]	1.48
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	1.48
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	1.48
COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	General function prediction only [R]	1.48
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	1.48
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	1.48
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.48
COG0043	3-polyprenyl-4-hydroxybenzoate decarboxylase	Coenzyme transport and metabolism [H]	1.48
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.74
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	0.74
COG2519	tRNA A58 N-methylase Trm61	Translation, ribosomal structure and biogenesis [J]	0.74
COG3182	PepSY-associated TM region	Function unknown [S]	0.74
COG3295	Uncharacterized conserved protein	Function unknown [S]	0.74
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	0.74
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.74
COG0592	DNA polymerase III sliding clamp (beta) subunit, PCNA homolog	Replication, recombination and repair [L]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.93 %
Unclassified	root	N/A	34.07 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.93 %
Unclassified	root	N/A	34.07 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.19 %
Unclassified	root	N/A	34.07 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.74 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	39.26 %
Unclassified	root	N/A	34.07 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.22 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.22 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.74 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.07 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	25.19 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.22 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.48 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.48 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	0.74 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.74 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.07 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	9.63 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.67 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	2.22 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.48 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.48 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.74 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.74 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	0.74 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.07 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.63 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2.22 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	1.48 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.48 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.74 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.74 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.74 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.74 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.74 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.74 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.74 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.07 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.63 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2.22 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.48 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.48 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.74 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.74 %
Actinomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae	0.74 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.74 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	0.74 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.74 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.74 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.07 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.63 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2.22 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.48 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.48 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.74 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	0.74 %
Actinomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae → Actinomyces	0.74 %
Gemmatimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	0.74 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.74 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.74 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.74 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.07 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.63 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2.22 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.48 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.48 %
unclassified Actinomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae → Actinomyces → unclassified Actinomyces	0.74 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.74 %
Gemmatimonas aurantiaca	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	0.74 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	0.74 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.74 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.74 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.74 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.07 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.63 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2.22 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.48 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.48 %
Actinomyces sp. oral taxon 175	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae → Actinomyces → unclassified Actinomyces → Actinomyces sp. oral taxon 175	0.74 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.74 %
Gemmatimonas aurantiaca	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	0.74 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	0.74 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.74 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.74 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.74 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2035918004\|FACENC_F56XM5W01DHD6G	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	518	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_103916537	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	528	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1039078	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300005181\|Ga0066678_10766583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	640	Open in IMG/M
3300005332\|Ga0066388_101711155	All Organisms → cellular organisms → Bacteria → Proteobacteria	1113	Open in IMG/M
3300005332\|Ga0066388_102543138	Not Available	931	Open in IMG/M
3300005518\|Ga0070699_100258974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1556	Open in IMG/M
3300005542\|Ga0070732_10165222	All Organisms → cellular organisms → Bacteria → Proteobacteria	1320	Open in IMG/M
3300005546\|Ga0070696_101318492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae → Actinomyces → unclassified Actinomyces → Actinomyces sp. oral taxon 175	613	Open in IMG/M
3300005713\|Ga0066905_100432020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1077	Open in IMG/M
3300005713\|Ga0066905_101230487	All Organisms → cellular organisms → Bacteria → Proteobacteria	671	Open in IMG/M
3300005764\|Ga0066903_104121571	Not Available	778	Open in IMG/M
3300005921\|Ga0070766_11077260	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300006031\|Ga0066651_10640132	Not Available	567	Open in IMG/M
3300006034\|Ga0066656_10364854	Not Available	933	Open in IMG/M
3300006049\|Ga0075417_10380095	All Organisms → cellular organisms → Bacteria → Proteobacteria	696	Open in IMG/M
3300006051\|Ga0075364_10965452	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300006057\|Ga0075026_100672348	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300006176\|Ga0070765_102113802	Not Available	526	Open in IMG/M
3300006578\|Ga0074059_12010974	All Organisms → cellular organisms → Bacteria	1033	Open in IMG/M
3300006605\|Ga0074057_12338444	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300006844\|Ga0075428_101187031	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300009012\|Ga0066710_101584177	All Organisms → cellular organisms → Bacteria	1005	Open in IMG/M
3300009792\|Ga0126374_10432498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	929	Open in IMG/M
3300010043\|Ga0126380_11819847	Not Available	551	Open in IMG/M
3300010047\|Ga0126382_12475701	Not Available	506	Open in IMG/M
3300010359\|Ga0126376_13039935	Not Available	518	Open in IMG/M
3300010359\|Ga0126376_13164148	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300010361\|Ga0126378_13379373	Not Available	507	Open in IMG/M
3300010362\|Ga0126377_11606941	Not Available	725	Open in IMG/M
3300010362\|Ga0126377_12705959	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300010398\|Ga0126383_12047279	Not Available	660	Open in IMG/M
3300012096\|Ga0137389_10930590	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300012205\|Ga0137362_11594105	Not Available	540	Open in IMG/M
3300012899\|Ga0157299_10292405	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300012961\|Ga0164302_11417145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	568	Open in IMG/M
3300012984\|Ga0164309_11933426	Not Available	506	Open in IMG/M
3300015358\|Ga0134089_10258635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	713	Open in IMG/M
3300015372\|Ga0132256_102962178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	571	Open in IMG/M
3300015374\|Ga0132255_103587801	Not Available	660	Open in IMG/M
3300016357\|Ga0182032_10170697	All Organisms → cellular organisms → Bacteria	1629	Open in IMG/M
3300016371\|Ga0182034_11423296	Not Available	606	Open in IMG/M
3300016404\|Ga0182037_11932891	Not Available	529	Open in IMG/M
3300016422\|Ga0182039_11338318	Not Available	649	Open in IMG/M
3300017792\|Ga0163161_10038740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	3420	Open in IMG/M
3300017927\|Ga0187824_10302160	Not Available	567	Open in IMG/M
3300017930\|Ga0187825_10041278	All Organisms → cellular organisms → Bacteria → Proteobacteria	1558	Open in IMG/M
3300017975\|Ga0187782_10518222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	913	Open in IMG/M
3300017993\|Ga0187823_10110653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	831	Open in IMG/M
3300017993\|Ga0187823_10160123	Not Available	716	Open in IMG/M
3300018066\|Ga0184617_1112664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	771	Open in IMG/M
3300018073\|Ga0184624_10161251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	990	Open in IMG/M
3300018081\|Ga0184625_10387883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	722	Open in IMG/M
3300018468\|Ga0066662_10283951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1378	Open in IMG/M
3300020005\|Ga0193697_1017907	All Organisms → cellular organisms → Bacteria	1746	Open in IMG/M
3300021180\|Ga0210396_10389992	All Organisms → cellular organisms → Bacteria → Acidobacteria	1225	Open in IMG/M
3300021407\|Ga0210383_10330946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1312	Open in IMG/M
3300021475\|Ga0210392_10965968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	638	Open in IMG/M
3300021477\|Ga0210398_10913317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	703	Open in IMG/M
3300021560\|Ga0126371_13190648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	554	Open in IMG/M
3300025912\|Ga0207707_10415081	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	1155	Open in IMG/M
3300025914\|Ga0207671_11558547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	509	Open in IMG/M
3300025920\|Ga0207649_10148757	All Organisms → cellular organisms → Bacteria	1610	Open in IMG/M
3300025939\|Ga0207665_10555682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	892	Open in IMG/M
3300026095\|Ga0207676_11827591	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300026116\|Ga0207674_10551070	All Organisms → cellular organisms → Bacteria	1114	Open in IMG/M
3300026557\|Ga0179587_10025391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3235	Open in IMG/M
3300026557\|Ga0179587_10661957	Not Available	688	Open in IMG/M
3300027490\|Ga0209899_1084806	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	620	Open in IMG/M
3300027768\|Ga0209772_10062258	All Organisms → cellular organisms → Bacteria	1120	Open in IMG/M
3300027889\|Ga0209380_10755580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	554	Open in IMG/M
3300027894\|Ga0209068_10863010	Not Available	535	Open in IMG/M
3300028717\|Ga0307298_10220921	All Organisms → cellular organisms → Bacteria → Proteobacteria	560	Open in IMG/M
3300028717\|Ga0307298_10250080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	526	Open in IMG/M
3300028906\|Ga0308309_11261758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	636	Open in IMG/M
3300030007\|Ga0311338_10020193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9655	Open in IMG/M
3300031198\|Ga0307500_10017750	Not Available	1507	Open in IMG/M
3300031366\|Ga0307506_10163537	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300031543\|Ga0318516_10097740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1657	Open in IMG/M
3300031544\|Ga0318534_10144270	All Organisms → cellular organisms → Bacteria → Proteobacteria	1373	Open in IMG/M
3300031545\|Ga0318541_10010061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4220	Open in IMG/M
3300031545\|Ga0318541_10658036	Not Available	585	Open in IMG/M
3300031546\|Ga0318538_10279974	All Organisms → cellular organisms → Bacteria → Proteobacteria	898	Open in IMG/M
3300031572\|Ga0318515_10311175	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300031668\|Ga0318542_10200962	Not Available	1005	Open in IMG/M
3300031680\|Ga0318574_10231464	All Organisms → cellular organisms → Bacteria	1066	Open in IMG/M
3300031682\|Ga0318560_10460832	Not Available	688	Open in IMG/M
3300031723\|Ga0318493_10341116	All Organisms → cellular organisms → Bacteria → Proteobacteria	813	Open in IMG/M
3300031748\|Ga0318492_10671706	Not Available	554	Open in IMG/M
3300031751\|Ga0318494_10735657	Not Available	578	Open in IMG/M
3300031763\|Ga0318537_10093992	All Organisms → cellular organisms → Bacteria → Proteobacteria	1108	Open in IMG/M
3300031771\|Ga0318546_11053622	Not Available	572	Open in IMG/M
3300031780\|Ga0318508_1006742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2455	Open in IMG/M
3300031780\|Ga0318508_1125703	All Organisms → cellular organisms → Bacteria → Proteobacteria	721	Open in IMG/M
3300031781\|Ga0318547_10402797	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300031781\|Ga0318547_10547507	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300031796\|Ga0318576_10444234	Not Available	612	Open in IMG/M
3300031833\|Ga0310917_10334290	Not Available	1027	Open in IMG/M
3300031833\|Ga0310917_10757297	All Organisms → cellular organisms → Bacteria → Proteobacteria	656	Open in IMG/M
3300031835\|Ga0318517_10277181	All Organisms → cellular organisms → Bacteria → Proteobacteria	757	Open in IMG/M
3300031845\|Ga0318511_10123403	Not Available	1117	Open in IMG/M
3300031846\|Ga0318512_10048170	All Organisms → cellular organisms → Bacteria	1893	Open in IMG/M
3300031846\|Ga0318512_10632754	Not Available	546	Open in IMG/M
3300031859\|Ga0318527_10098591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1197	Open in IMG/M
3300031879\|Ga0306919_11008119	Not Available	636	Open in IMG/M
3300031880\|Ga0318544_10273215	Not Available	655	Open in IMG/M
3300031890\|Ga0306925_10325164	All Organisms → cellular organisms → Bacteria	1653	Open in IMG/M
3300031897\|Ga0318520_10326197	Not Available	928	Open in IMG/M
3300031910\|Ga0306923_11187200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	816	Open in IMG/M
3300031912\|Ga0306921_11030698	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300031912\|Ga0306921_12325001	Not Available	561	Open in IMG/M
3300031913\|Ga0310891_10212046	Not Available	655	Open in IMG/M
3300031942\|Ga0310916_10458923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1085	Open in IMG/M
3300031944\|Ga0310884_10678272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	622	Open in IMG/M
3300031945\|Ga0310913_10374915	All Organisms → cellular organisms → Bacteria	1008	Open in IMG/M
3300031946\|Ga0310910_10344362	All Organisms → cellular organisms → Bacteria	1177	Open in IMG/M
3300031947\|Ga0310909_10336811	Not Available	1266	Open in IMG/M
3300031954\|Ga0306926_10340649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1854	Open in IMG/M
3300031954\|Ga0306926_11816538	All Organisms → cellular organisms → Bacteria → Proteobacteria	691	Open in IMG/M
3300031981\|Ga0318531_10143269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1068	Open in IMG/M
3300032001\|Ga0306922_10188250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2213	Open in IMG/M
3300032009\|Ga0318563_10224561	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1014	Open in IMG/M
3300032010\|Ga0318569_10430327	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300032044\|Ga0318558_10058581	All Organisms → cellular organisms → Bacteria → Proteobacteria	1724	Open in IMG/M
3300032044\|Ga0318558_10391803	Not Available	691	Open in IMG/M
3300032052\|Ga0318506_10022350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2330	Open in IMG/M
3300032055\|Ga0318575_10141211	Not Available	1192	Open in IMG/M
3300032059\|Ga0318533_11148394	Not Available	569	Open in IMG/M
3300032063\|Ga0318504_10125082	All Organisms → cellular organisms → Bacteria → Proteobacteria	1169	Open in IMG/M
3300032065\|Ga0318513_10648718	Not Available	517	Open in IMG/M
3300032068\|Ga0318553_10475927	Not Available	654	Open in IMG/M
3300032068\|Ga0318553_10769782	Not Available	503	Open in IMG/M
3300032090\|Ga0318518_10160984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1142	Open in IMG/M
3300033289\|Ga0310914_11629002	Not Available	549	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.59%
Host-Associated	Host-Associated	7.41%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.19%
Aquatic	Environmental → Aquatic	7.41%
Plants	Host-Associated → Plants	7.41%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.44%
Freshwater	Environmental → Aquatic → Freshwater	3.70%
Sediment	Environmental → Aquatic → Sediment	3.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.70%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.96%
Peat	Environmental → Terrestrial → Peat	0.74%
Roots	Host-Associated → Plants → Roots	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.59%
Loam	Environmental → Terrestrial → Soil → Loam	9.63%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.70%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.22%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.22%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.48%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.48%
Sand	Environmental → Terrestrial → Soil → Sand	0.74%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.74%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.74%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	46.67%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.44%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.22%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.22%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.96%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.48%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.48%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.74%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.74%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.74%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	37.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.70%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.22%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.22%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.96%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.96%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.96%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.48%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.48%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.48%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.74%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.74%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.74%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.74%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.74%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.74%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.74%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.74%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.74%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2035918004	Soil microbial communities from sample at FACE Site 2 North Carolina CO2-	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027490	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F058294

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FACENCA_3834470	2035918004	Soil	MTREATRMKKHDESRRAFLIGAAVGAAATTTFVPDAIAQTH
INPhiseqgaiiFebDRAFT_1039165371	3300000364	Soil	MAKHDESRRAFLVGAAVGAGAVAGTSMVSEALAQHRKQ
AF_2010_repII_A01DRAFT_10390781	3300000580	Forest Soil	MTKHDEARRAFLLGAAVGAGAVAGATLVPDALSQTHEAP
Ga0066678_107665831	3300005181	Soil	MAKHDESRRAFLVGTVAGAGAVAAGAGLVPEGQAQTQRQQAAPV
Ga0066388_1017111552	3300005332	Tropical Forest Soil	MTKHDEARRAFLVGAAVGAGAVAGATLVPNALAQTQEAPRTT
Ga0066388_1025431381	3300005332	Tropical Forest Soil	MIMSKHDEARRAFLVGTAIGAGAAASVALVPGALAQHQPPQ
Ga0070699_1002589741	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MTKHDEARRAFLLGAAVGAGAVAGATLVPDALAQTHDART
Ga0070732_101652221	3300005542	Surface Soil	MSEHDEGRRAFLVGAAASAGALAGTTLAPEARAQMHDMPMGHTTP
Ga0070696_1013184921	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MTKHDEARRAFLMGAAVGAGAVAGATLVPDALAQTHEPSTTGTGPAHSHAGGP
Ga0066905_1004320201	3300005713	Tropical Forest Soil	MSKPDEGRRAFLIGAAVGAGAAAGLVPDAIAQTHPPHPA
Ga0066905_1012304872	3300005713	Tropical Forest Soil	MTKHDEARRAFLLGAAVGAGAVAGATLVPDALAQTHDARTTGTGTGPAHS
Ga0066903_1041215713	3300005764	Tropical Forest Soil	MSKHDESRRAFLIGGATVGAGAVTGLVPDALAQTHAQ
Ga0070766_110772602	3300005921	Soil	MSKHDEARRAFLKGAAVGAGAIAGTGLVPQAFAEPHERHPHEHKT
Ga0066651_106401321	3300006031	Soil	MTKHDEARRAFLLGAAVGAGAVAGATLVPDALAQTPDAPTTGTATG
Ga0066656_103648541	3300006034	Soil	MTKHDEARRAFLVGAAVGAGAVAGATLVPNALAQTHEAPTTGTA
Ga0075417_103800951	3300006049	Populus Rhizosphere	MSKYDEARRAFLIGAAVGAGAVAGKGLVADAFAQTH
Ga0075364_109654522	3300006051	Populus Endosphere	MSKHDESRRAFLIGGATVGAGAVTGLVPDALAQTH
Ga0075026_1006723482	3300006057	Watersheds	MKKHEESRRAFLIGTAVGASAVAGAGLVPTALAQTQEQ
Ga0070765_1021138021	3300006176	Soil	MSKHDEARRAFLKGAAAGAGVIAGTGLAPQALAKE
Ga0074059_120109742	3300006578	Soil	MTKHDEARRAFLVGAAVGAGAVAGATLVPDALAQT
Ga0074057_123384442	3300006605	Soil	MKKHEESRRAFLIGTAVGASAVAGAGLVPNALAQTHEQHNAA
Ga0075428_1011870311	3300006844	Populus Rhizosphere	MKKHEESRRAFLIGTAVGASAVAGAGLVPNALAQTHEQHSA
Ga0066710_1015841771	3300009012	Grasslands Soil	MTKHDEARRAFLVGAALGAGAVAAGAGLVADAEAQIHAQPKGNGG
Ga0126374_104324982	3300009792	Tropical Forest Soil	MTKHDEARRAFLLGAAVGAGAVAGATLVPDALAQTHEPST
Ga0126380_118198471	3300010043	Tropical Forest Soil	MTKHDEARRAFLLGAAVGAGAVAGATLVPDALAQTHDAP
Ga0126382_124757011	3300010047	Tropical Forest Soil	MTKHDEARRAFLLGAAVGAGAVAGATLVPDALAQTR
Ga0126376_130399352	3300010359	Tropical Forest Soil	MSRKHDESRRAFLVGAAVGASSVAGGLVPGALAQNQSPA
Ga0126376_131641482	3300010359	Tropical Forest Soil	MSKHDESRRAFLIGGATVGAGAVTGLVPDALAQTHA
Ga0126378_133793731	3300010361	Tropical Forest Soil	MTKHDEARRAFLVGAAVGAGAVAGATLVPNALGQTHEAPTTGAAPAPSHA
Ga0126377_116069412	3300010362	Tropical Forest Soil	MSKHDEARRAFLVGAAVGASAAAGAALIPDALAQT
Ga0126377_127059592	3300010362	Tropical Forest Soil	MKKHDEARRAFLIGAAAGASVAATGARLVPDAVAQTPAHDA
Ga0126383_120472791	3300010398	Tropical Forest Soil	MSKHDEARRAFLLGAAVGAGAVAGATLVPDALAQTRDAPTTGTATGSVHAHAGG
Ga0137389_109305902	3300012096	Vadose Zone Soil	MSKHDESRRAFLIGTAVGAGAVAGSGLVPDALAQTHAQH
Ga0137362_115941051	3300012205	Vadose Zone Soil	MTKHDEARRAFLVGAAVGAGAVAGATLVPNALAQTH
Ga0157299_102924051	3300012899	Soil	MSKHDESRRAFLIGTAVGASAVAGAGLVPTALAQTNV
Ga0164302_114171452	3300012961	Soil	MEETLMSKHDEARRAFLVGAAVGAGAAAGAALVPEAL
Ga0164309_119334262	3300012984	Soil	MTREATSMKNHDESRRAFLIGAGMGAAATTTLVPDAIAQTNEQR
Ga0134089_102586352	3300015358	Grasslands Soil	MSEHDEGRRAFLLRAAATAGVVAGAGLAPDALAQDH
Ga0132256_1029621781	3300015372	Arabidopsis Rhizosphere	MSKHDEARRAFLVGVAAGAVAGTGLKTEALAQTHEQHAAV
Ga0132255_1035878011	3300015374	Arabidopsis Rhizosphere	MTQPDEGRRAFLVRTAVGAGAVAGAALVPDALAQT
Ga0182032_101706973	3300016357	Soil	MTKHDEARRAFLLGAAVGAGAVAGATLVPDALAQTHDARTTGTGTGPAHSPA
Ga0182034_114232962	3300016371	Soil	MKKHDESRRAFLIGAAVGAAATTALVPDAIAQTHEQHGVPT
Ga0182037_119328911	3300016404	Soil	MTKHDEARRAFLLGAAVGAGAVAGATLVPDALAQTHEPSTTGTG
Ga0182039_113383181	3300016422	Soil	MTKHDEARRAFLVGAAVGAGAVAGATLVPNALAQTQ
Ga0163161_100387403	3300017792	Switchgrass Rhizosphere	MKKQEESRRAFLIGTAVGASAVAGAGLVPNALAQT
Ga0187824_103021602	3300017927	Freshwater Sediment	MSEHDEGRRAFLVGAAASAGALAGTTLVPEAHAQM
Ga0187825_100412784	3300017930	Freshwater Sediment	MPQHDEGRRAFLKGAAASAGAVAGATLIPPAQAADQ
Ga0187782_105182222	3300017975	Tropical Peatland	MAKHDESRRAFLIGTAVGAGAVAGTTMVSDALAQQ
Ga0187823_101106531	3300017993	Freshwater Sediment	MSEHDEGRRAFLVGAAASAGALAGTTLVPEAHAQMRDMP
Ga0187823_101601233	3300017993	Freshwater Sediment	MPQHDEGRRAFLKGAAASAGAVAGATLIPPAQAAD
Ga0184617_11126641	3300018066	Groundwater Sediment	MKKHEESRRAFLIGTAVGASAVAGAGLVPNALAQTHEQ
Ga0184624_101612512	3300018073	Groundwater Sediment	MSKHDEARRAFLIGAAVGAGAVAGKGLVPEALAQTH
Ga0184625_103878832	3300018081	Groundwater Sediment	VTKHDESRRAFLVGTVAGAGAVAAGAALPESAEAQVQPPV
Ga0066662_102839512	3300018468	Grasslands Soil	MTKHDEARRAFLLGAAVGAGAVAGATLVPDALAQTHEPSTT
Ga0193697_10179072	3300020005	Soil	MKKHEESRRAFLIGTAVGASAVAGAGLVPNALAQTHEQHN
Ga0210396_103899921	3300021180	Soil	MAERDTSRRAFLVRAAVGAGAVAGASVVPDLSGQNP
Ga0210383_103309462	3300021407	Soil	MGKPDESRRAFLVGAAVGAGAVAGTTMVPGALAQHRQHPK
Ga0210392_109659682	3300021475	Soil	MAKHDESRRAFLVGAAVGAGAVAGTSMVTDALAQQHRQ
Ga0210398_109133171	3300021477	Soil	MGKPDESRRAFLVGAAVGAGAVAGTTMVPGALAQH
Ga0126371_131906482	3300021560	Tropical Forest Soil	MAKHDESRRAFLVGAAVGAGAVAGTSMVTDALAQQHR
Ga0207707_104150811	3300025912	Corn Rhizosphere	MKKHEESRRAFLIGTAVGASAVAGAGLVPNALAQTHEQHNAADVP
Ga0207671_115585471	3300025914	Corn Rhizosphere	MKKHEESRRAFLIGTAVGASAVAGAGLVPNALAQTHEQHNAADV
Ga0207649_101487572	3300025920	Corn Rhizosphere	MKKKHEESRRAFLIGTAVGASAVAGAGLVPNALAQTHEQHNAA
Ga0207665_105556822	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MSKHDEARRAFLVGAAVVGAGAALAPEALAQQQPAATNT
Ga0207676_118275912	3300026095	Switchgrass Rhizosphere	MKKHDEARRAFLVGAAVGAGAVASQTFAPGGLVADARA
Ga0207674_105510701	3300026116	Corn Rhizosphere	MKKHEESRRAFLIGTAVGASAVAGAGLVPNALAQTHEQHNAAD
Ga0179587_100253911	3300026557	Vadose Zone Soil	MSTHDEARRAFLKGAAAAGAIAGAAVVPQGIPEAMAESHEKR
Ga0179587_106619571	3300026557	Vadose Zone Soil	MSKHDEARRAFLKGAALGAGAIAGAGFVPQTLAQAHEQHNDI
Ga0209899_10848061	3300027490	Groundwater Sand	MSKHDEARRAFLVGAAGAAAGAALVPDALAQQHQH
Ga0209772_100622582	3300027768	Bog Forest Soil	MGKHGKHDESRRAFLVGAAVGAGTVAGTTMVSGALAQH
Ga0209380_107555801	3300027889	Soil	MSKHDEARRAFLKGAAVGAGAIAGTGLVPQAFAEQHERHPHEHKT
Ga0209068_108630101	3300027894	Watersheds	MTKHDEARRAFLLGAAVGAGAVAGATLVPDALAQTHEPSTTGTGPPH
Ga0307298_102209211	3300028717	Soil	MKKHEESRRAFLIGTAVGASAVAGTGLVPTALAQTHEQHPAAD
Ga0307298_102500801	3300028717	Soil	MKKHEESRRAFLIGTAVGASAVAGAGLVPTALAQTHEQHP
Ga0308309_112617582	3300028906	Soil	MSKHDEARRAFLKGAAVGAGAIAGTGLVPEAFAKPHEKHKT
Ga0311338_100201931	3300030007	Palsa	MAKHDESRRAFLVGAAVGAGAVAGTGMVSGALAQHRQH
Ga0307500_100177501	3300031198	Soil	MSKHDESRRAFLIGTAVGAGAVAGAGLAPGALAQTHAQHGPADV
Ga0307506_101635371	3300031366	Soil	MKKHEESRRAFLIGTAVGASAVAGAGLVPNALAQTHEQHNA
Ga0318516_100977404	3300031543	Soil	MTKHDEARRAFLVGAAVGAGAVAGATLVPNALGQTHEAPTTGAAPAPSHSGG
Ga0318534_101442701	3300031544	Soil	MTKHDEARRAFLLGAAVGAGAVAGATLVPDALAQTHEPSTTGTD
Ga0318541_100100611	3300031545	Soil	MTKHDEARRAFLLGAAVGAGAVAGATLVPDALAQTHE
Ga0318541_106580361	3300031545	Soil	MTKHDEGRRAFLVGAAVGAGAVAGATLVPNALAQTHDARTTG
Ga0318538_102799741	3300031546	Soil	MTKHDEARRAFLLGAAVGAGAVAGATLMPDALAQTHEPSTTGTGPAHSHAGGPGLG
Ga0318515_103111751	3300031572	Soil	MTKHDEARRAFLLGAAVGAGAVAGATLVPDALAQTHEPSRTG
Ga0318542_102009621	3300031668	Soil	MTKHDEARRAFLLGAAVGAGAVAGATLVPDALAQTRDAPTTGTGAVHSHAGG
Ga0318574_102314642	3300031680	Soil	MTKHNESRRAFLVGTAVGAGAVAGAGLVPTAVPTRK
Ga0318560_104608323	3300031682	Soil	MSKHDEARRAFLIGAAVGAGAVAGKGLVPEALAQTHEQHKATDAP
Ga0318493_103411161	3300031723	Soil	MTKHDEARRAFLLGAAVGAGAVAGATLVPDALAQTHERS
Ga0318492_106717061	3300031748	Soil	MTKHDEARRAFLLGAAVGAGAVAGATLVPDALAQTHEPSR
Ga0318494_107356571	3300031751	Soil	MTKHDEGRRAFLVGAAVGAGAVAGATLVPNALAQTHDARTTGTGPAPAHSHA
Ga0318537_100939922	3300031763	Soil	MTKHDEARRAFLLGAAVGAGAVAGATLVPDALAQTHDAPTTG
Ga0318546_110536221	3300031771	Soil	MSKHDEARRAFLKGAAVGAGAIAGTGLISEALAKPHEKHK
Ga0318508_10067421	3300031780	Soil	MTKHDEARRAFLLGAAVGAGAVAGATLVPDALAQTHEPSTTGTGPAHSHAGG
Ga0318508_11257032	3300031780	Soil	MTKHDEARRAFLLGAAVGAGAVAGATLVPDALAQTHEPSTTGTGPAHSHAGGPGLG
Ga0318547_104027971	3300031781	Soil	MTKHDEGRRAFLVGAAVGAGAVAGATLVPNALAQT
Ga0318547_105475072	3300031781	Soil	MTKHDEARRAFLLGAAVGAGAVAGATIVPNAFAQTHEAATIGTAPP
Ga0318576_104442342	3300031796	Soil	MTKHDEARRAFLVGAAVGAGAVAGATLVPNALGQTHEAPTTGAA
Ga0310917_103342901	3300031833	Soil	MKKHDESRRAFLIGAAVGAAATTALVPDAIAQTHE
Ga0310917_107572971	3300031833	Soil	MTKHDEARRAFLLGAAVGAGAVAGATLVPDALAQT
Ga0318517_102771811	3300031835	Soil	MTKHDEARRAFLLGAAVGAGAVAGATLVPDALAQTHDAPTTGTG
Ga0318511_101234033	3300031845	Soil	MTKHDEARRAFLLGAAVGAGAVAGATLVPDALAQTRDAPTTGTGAVHSHAGGP
Ga0318512_100481702	3300031846	Soil	MTKHNESRRAFLVGTAVGAGAVAGAGLVPTALAQTPPQH
Ga0318512_106327541	3300031846	Soil	MTKHDEARRAFLVGAAVGAGAVAGATLVPNALGQTHEAPTTGAAPA
Ga0318527_100985912	3300031859	Soil	MTKHDEARRAFLLGAAVGAGAVAGATLVPDALAQTHDARTTGTG
Ga0306919_110081192	3300031879	Soil	MTKHDEARRAFLLGAAVGAGAVAGATLVPDALAQTHEPSRTGTGPAHSHAGGPGL
Ga0318544_102732151	3300031880	Soil	MTKHDEARRAFLLGAAVGAGAVAGATLVPDALAQTHEPSTTG
Ga0306925_103251643	3300031890	Soil	MTKHNESRRAFLVGTAVGAGAVAGAGLVPTALAQTPPQ
Ga0318520_103261971	3300031897	Soil	MSKHDEARRAFLIGAAVGAGAVAGKGLVPEALAQTHEQ
Ga0306923_111872002	3300031910	Soil	MTKPDEARRAFLLGAAVGAGAVAGATLVPDALAQTHDARTTGT
Ga0306921_110306981	3300031912	Soil	MTKHDEARRAFLLGAAVGAGAVAGATLVPDALAQTHEP
Ga0306921_123250011	3300031912	Soil	MTKHDEARRAFLVGAAVGAGAVAGATLVPNALAQTHDARTTGTGPAPA
Ga0310891_102120462	3300031913	Soil	MKKHEESRRAFLIGTAVGASAVAGAGLVPNALAQTHEQH
Ga0310916_104589231	3300031942	Soil	MTKHDEARRAFLLGAAVGAGAVAGATLVPDALAQTHEAP
Ga0310884_106782721	3300031944	Soil	MKKHEESRRAFLIGTAVGASAVAGAGLVPNALGQTHEQHNAADV
Ga0310913_103749151	3300031945	Soil	MSKHDEARRAFLIGAAVGAGAVAGKGLVPEALAQT
Ga0310910_103443621	3300031946	Soil	MRKHDDARRAFLIGAAAGAGAAAGVAFDAFAQAPEQ
Ga0310909_103368111	3300031947	Soil	MSKHDEARRAFLKGAAVGAGAIAGTGLISEALAKPHEKPK
Ga0306926_103406493	3300031954	Soil	MRKHDDARRAFLIGAAAGAGAAAGVAFDAFAQAPEQH
Ga0306926_118165381	3300031954	Soil	MTKHDEARRAFLLGAAVGAGAVAGATLVPDALAQTH
Ga0318531_101432692	3300031981	Soil	MTKHDEARRAFLVGAAVGAGAVAGATLVPNALGQTHEAPTTGA
Ga0306922_101882501	3300032001	Soil	MTKHDEARRAFLLGAAVGAGAVAGATIVPNAFAQTHEAATIGTAPPATPSHA
Ga0318563_102245611	3300032009	Soil	MTKHDEARRAFLVGAAVGAGAVAGATLVPNALAQTQEAPRTTGTVPP
Ga0318569_104303272	3300032010	Soil	MTKHDEARRAFLVGAAVGAGAVAGATLVPNALAQTQEAP
Ga0318558_100585811	3300032044	Soil	MTKHDEARRAFLLGAAVGAGAVAGATLVPDALAQTHEPSTTGTGPAHS
Ga0318558_103918032	3300032044	Soil	MSKHDEARRAFLIGAAVGAGAVAGKGLVPEALAQTHEQHK
Ga0318506_100223504	3300032052	Soil	MTKHDEARRAFLVGAAVGAGAVAGATLVPNALGQTHE
Ga0318575_101412113	3300032055	Soil	MTKHDEARRAFLLGAAVGAGAVAGATLVPDALAQTHDARTTGTGTGPAHSPAG
Ga0318533_111483941	3300032059	Soil	MSKHDEARRAFLKGAALGASAVAGAGLVPQALAQAPEQVIPRRQVL
Ga0318504_101250821	3300032063	Soil	MTKHDEARRAFLLGAAVGAGAVAGATLVPDALAQTHDARTTGTGTGPVH
Ga0318513_106487181	3300032065	Soil	MTKHDEARRAFLVGAAVGAGAVAGATLVPNALGQTH
Ga0318553_104759271	3300032068	Soil	MSKHDEARRAFLIGAAVGAGAVAGKGLVPEALAQTHEQHKATDAPA
Ga0318553_107697821	3300032068	Soil	MTKHDEARRAFLLGAAVGAGAVAGATLVPDALAQTHEPSTTGTGPAH
Ga0318518_101609841	3300032090	Soil	MTKHDEARRAFLVGAAVGAGAVAGATLVPNALGQTHEAPTTGAAPAPSHAGGPGL
Ga0335080_108611892	3300032828	Soil	MSKRRDSKHDEARRAFLVGAAVGAVTGAGLVPEALAQDRQPTPAAPP
Ga0310914_116290021	3300033289	Soil	MTKHDEARRAFLLGAAVGAGAVAGATLVPDALAQTHEPSTTGTGPAHSH

Hidden Markov Model


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