Metagenome / Metatranscriptome Family F058279

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F058279
Family Type	Metagenome / Metatranscriptome
Number of Sequences	135
Average Sequence Length	43 residues
Representative Sequence	MSITSKVRQSVVLAADGQVQALVAGSAANITKANIMTI
Number of Associated Samples	115
Number of Associated Scaffolds	135

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	91.85 %
% of genes from short scaffolds (< 2000 bps)	88.89 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (75.556 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (48.148 % of family members)
Environment Ontology (ENVO)	Unclassified (85.926 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (82.963 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.03% β-sheet: 0.00% Coil/Unstructured: 46.97%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 135 Family Scaffolds
PF00892	EamA	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.56 %
All Organisms	root	All Organisms	24.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.56 %
cellular organisms	root	All Organisms → cellular organisms	14.81 %
Viruses	superkingdom	All Organisms → Viruses	9.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.56 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	14.81 %
environmental samples	no rank	All Organisms → Viruses → environmental samples	6.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.56 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	8.15 %
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	6.67 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.22 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.22 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.56 %
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	6.67 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	3.70 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.22 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.22 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	2.96 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.48 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.74 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.56 %
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	6.67 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3.70 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.22 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.22 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	2.96 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	1.48 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.74 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.56 %
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	6.67 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	3.70 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.22 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.22 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	2.96 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.48 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.74 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.56 %
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	6.67 %
unclassified Myxococcales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales	3.70 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.22 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.22 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	2.96 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.48 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.74 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.56 %
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	6.67 %
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	3.70 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.22 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.22 %
Gimesia	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Gimesia	2.96 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.48 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.74 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.56 %
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	6.67 %
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	3.70 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.22 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.22 %
unclassified Gimesia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Gimesia → unclassified Gimesia	2.96 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.48 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.74 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.56 %
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	6.67 %
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	3.70 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.22 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.22 %
Gimesia sp.	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Gimesia → unclassified Gimesia → Gimesia sp.	2.96 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.48 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.74 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001934\|GOS2267_100463	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1806	Open in IMG/M
3300002482\|JGI25127J35165_1111463	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	545	Open in IMG/M
3300002514\|JGI25133J35611_10151610	Not Available	637	Open in IMG/M
3300005514\|Ga0066866_10142768	Not Available	859	Open in IMG/M
3300005747\|Ga0076924_1389987	Not Available	661	Open in IMG/M
3300006191\|Ga0075447_10227676	Not Available	608	Open in IMG/M
3300006332\|Ga0068500_1312860	Not Available	2311	Open in IMG/M
3300006467\|Ga0099972_10551506	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	958	Open in IMG/M
3300006735\|Ga0098038_1233451	Not Available	585	Open in IMG/M
3300006750\|Ga0098058_1193634	Not Available	530	Open in IMG/M
3300006751\|Ga0098040_1087801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	943	Open in IMG/M
3300006752\|Ga0098048_1187624	Not Available	612	Open in IMG/M
3300006754\|Ga0098044_1136965	Not Available	987	Open in IMG/M
3300006754\|Ga0098044_1411480	Not Available	508	Open in IMG/M
3300006789\|Ga0098054_1212583	Not Available	703	Open in IMG/M
3300006793\|Ga0098055_1274082	Not Available	632	Open in IMG/M
3300006921\|Ga0098060_1123519	Not Available	725	Open in IMG/M
3300006923\|Ga0098053_1057937	Not Available	795	Open in IMG/M
3300006923\|Ga0098053_1059505	Not Available	783	Open in IMG/M
3300006923\|Ga0098053_1068679	Not Available	722	Open in IMG/M
3300006925\|Ga0098050_1077741	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300006925\|Ga0098050_1141757	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Gimesia → unclassified Gimesia → Gimesia sp.	606	Open in IMG/M
3300006926\|Ga0098057_1055676	Not Available	969	Open in IMG/M
3300006929\|Ga0098036_1279160	Not Available	504	Open in IMG/M
3300006947\|Ga0075444_10263747	Not Available	674	Open in IMG/M
3300006990\|Ga0098046_1085106	Not Available	709	Open in IMG/M
3300006990\|Ga0098046_1132824	Not Available	539	Open in IMG/M
3300007345\|Ga0070752_1228600	Not Available	731	Open in IMG/M
3300007960\|Ga0099850_1213105	Not Available	756	Open in IMG/M
3300008050\|Ga0098052_1076699	Not Available	1391	Open in IMG/M
3300008050\|Ga0098052_1157193	Not Available	898	Open in IMG/M
3300008050\|Ga0098052_1404690	Not Available	507	Open in IMG/M
3300008216\|Ga0114898_1145515	Not Available	685	Open in IMG/M
3300008220\|Ga0114910_1140229	Not Available	694	Open in IMG/M
3300009149\|Ga0114918_10450693	Not Available	694	Open in IMG/M
3300009433\|Ga0115545_1146608	Not Available	826	Open in IMG/M
3300009436\|Ga0115008_10347075	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1053	Open in IMG/M
3300009512\|Ga0115003_10275129	Not Available	1000	Open in IMG/M
3300009529\|Ga0114919_10652626	Not Available	718	Open in IMG/M
3300009544\|Ga0115006_10685096	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	901	Open in IMG/M
3300009550\|Ga0115013_10903650	Not Available	619	Open in IMG/M
3300009604\|Ga0114901_1238322	Not Available	512	Open in IMG/M
3300009679\|Ga0115105_10937255	Not Available	515	Open in IMG/M
3300009786\|Ga0114999_10338168	Not Available	1200	Open in IMG/M
3300009790\|Ga0115012_10980002	Not Available	697	Open in IMG/M
3300010150\|Ga0098056_1237807	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Gimesia → unclassified Gimesia → Gimesia sp.	605	Open in IMG/M
3300010151\|Ga0098061_1289272	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Gimesia → unclassified Gimesia → Gimesia sp.	565	Open in IMG/M
3300010153\|Ga0098059_1180477	Not Available	826	Open in IMG/M
3300010934\|Ga0137844_1158289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	819	Open in IMG/M
3300012419\|Ga0138260_10219320	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	801	Open in IMG/M
3300013010\|Ga0129327_10171736	Not Available	1086	Open in IMG/M
3300017697\|Ga0180120_10331885	Not Available	604	Open in IMG/M
3300017697\|Ga0180120_10447442	Not Available	504	Open in IMG/M
3300017705\|Ga0181372_1026377	Not Available	987	Open in IMG/M
3300017714\|Ga0181412_1052860	Not Available	1025	Open in IMG/M
3300017715\|Ga0181370_1020417	Not Available	864	Open in IMG/M
3300017720\|Ga0181383_1113520	Not Available	727	Open in IMG/M
3300017721\|Ga0181373_1024774	All Organisms → cellular organisms → Bacteria → Proteobacteria	1115	Open in IMG/M
3300017721\|Ga0181373_1032705	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	959	Open in IMG/M
3300017730\|Ga0181417_1155682	Not Available	551	Open in IMG/M
3300017746\|Ga0181389_1137281	Not Available	657	Open in IMG/M
3300017748\|Ga0181393_1093559	Not Available	779	Open in IMG/M
3300017755\|Ga0181411_1089159	Not Available	918	Open in IMG/M
3300017756\|Ga0181382_1067682	All Organisms → cellular organisms → Bacteria → Proteobacteria	1002	Open in IMG/M
3300017757\|Ga0181420_1095546	Not Available	918	Open in IMG/M
3300017757\|Ga0181420_1146180	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	707	Open in IMG/M
3300017759\|Ga0181414_1088722	Not Available	816	Open in IMG/M
3300017762\|Ga0181422_1125839	Not Available	793	Open in IMG/M
3300017762\|Ga0181422_1208456	Not Available	587	Open in IMG/M
3300017763\|Ga0181410_1213465	Not Available	525	Open in IMG/M
3300017765\|Ga0181413_1145952	Not Available	714	Open in IMG/M
3300017765\|Ga0181413_1174728	Not Available	644	Open in IMG/M
3300020296\|Ga0211474_1032404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	850	Open in IMG/M
3300020438\|Ga0211576_10339816	Not Available	775	Open in IMG/M
3300020451\|Ga0211473_10167088	Not Available	1133	Open in IMG/M
3300021373\|Ga0213865_10476977	Not Available	537	Open in IMG/M
3300022057\|Ga0212025_1053184	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	699	Open in IMG/M
3300022074\|Ga0224906_1143253	Not Available	678	Open in IMG/M
3300022187\|Ga0196899_1070849	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1087	Open in IMG/M
(restricted) 3300022920\|Ga0233426_10228305	Not Available	751	Open in IMG/M
(restricted) 3300022931\|Ga0233433_10247576	Not Available	755	Open in IMG/M
(restricted) 3300023109\|Ga0233432_10408292	Not Available	592	Open in IMG/M
(restricted) 3300023210\|Ga0233412_10234310	Not Available	801	Open in IMG/M
(restricted) 3300024059\|Ga0255040_10063131	Not Available	1389	Open in IMG/M
(restricted) 3300024518\|Ga0255048_10329848	Not Available	739	Open in IMG/M
(restricted) 3300024528\|Ga0255045_10244183	Not Available	711	Open in IMG/M
3300025078\|Ga0208668_1056445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	721	Open in IMG/M
3300025082\|Ga0208156_1045455	Not Available	896	Open in IMG/M
3300025085\|Ga0208792_1003442	All Organisms → Viruses	4326	Open in IMG/M
3300025085\|Ga0208792_1046002	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	827	Open in IMG/M
3300025085\|Ga0208792_1082327	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Gimesia → unclassified Gimesia → Gimesia sp.	572	Open in IMG/M
3300025098\|Ga0208434_1015188	All Organisms → Viruses → Predicted Viral	2015	Open in IMG/M
3300025098\|Ga0208434_1094998	Not Available	590	Open in IMG/M
3300025103\|Ga0208013_1058318	Not Available	1032	Open in IMG/M
3300025103\|Ga0208013_1093681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	764	Open in IMG/M
3300025109\|Ga0208553_1043281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1129	Open in IMG/M
3300025118\|Ga0208790_1009154	All Organisms → Viruses → Predicted Viral	3657	Open in IMG/M
3300025120\|Ga0209535_1044766	Not Available	1941	Open in IMG/M
3300025122\|Ga0209434_1081202	Not Available	951	Open in IMG/M
3300025122\|Ga0209434_1088913	Not Available	896	Open in IMG/M
3300025128\|Ga0208919_1104264	Not Available	911	Open in IMG/M
3300025132\|Ga0209232_1145711	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	760	Open in IMG/M
3300025132\|Ga0209232_1230607	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	546	Open in IMG/M
3300025133\|Ga0208299_1133109	Not Available	800	Open in IMG/M
3300025151\|Ga0209645_1155482	Not Available	702	Open in IMG/M
3300025168\|Ga0209337_1173307	Not Available	908	Open in IMG/M
3300025543\|Ga0208303_1104738	Not Available	592	Open in IMG/M
3300025803\|Ga0208425_1114466	Not Available	621	Open in IMG/M
3300025810\|Ga0208543_1116286	Not Available	634	Open in IMG/M
3300025818\|Ga0208542_1110685	Not Available	780	Open in IMG/M
3300025828\|Ga0208547_1108064	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	845	Open in IMG/M
3300025869\|Ga0209308_10127514	Not Available	1196	Open in IMG/M
3300027788\|Ga0209711_10221776	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	860	Open in IMG/M
(restricted) 3300027856\|Ga0255054_10015291	All Organisms → Viruses → Predicted Viral	3980	Open in IMG/M
3300028125\|Ga0256368_1011837	Not Available	1480	Open in IMG/M
3300028125\|Ga0256368_1093353	Not Available	507	Open in IMG/M
3300028287\|Ga0257126_1187277	Not Available	655	Open in IMG/M
3300031227\|Ga0307928_10068862	Not Available	2177	Open in IMG/M
3300031519\|Ga0307488_10573901	Not Available	659	Open in IMG/M
3300031539\|Ga0307380_10632210	Not Available	915	Open in IMG/M
3300031556\|Ga0308142_1071912	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300031605\|Ga0302132_10095694	Not Available	1502	Open in IMG/M
3300031659\|Ga0307986_10326895	Not Available	634	Open in IMG/M
3300032277\|Ga0316202_10262263	Not Available	803	Open in IMG/M
3300032373\|Ga0316204_10462321	Not Available	951	Open in IMG/M
3300033742\|Ga0314858_090688	Not Available	771	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.26%
Terrestrial	Environmental → Terrestrial	0.74%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	97.78%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	0.74%
Unclassified	Environmental → Aquatic → Unclassified	0.74%
Soil	Environmental → Terrestrial → Soil	0.74%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	52.59%
Coastal	Environmental → Aquatic → Marine → Coastal	15.56%
Strait	Environmental → Aquatic → Marine → Strait	14.81%
Unclassified	Environmental → Aquatic → Marine → Unclassified	6.67%
Inlet	Environmental → Aquatic → Marine → Inlet	5.19%
Pelagic	Environmental → Aquatic → Marine → Pelagic	2.22%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.74%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	0.74%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	0.74%
Clay	Environmental → Terrestrial → Soil → Clay	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	50.37%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	14.81%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	13.33%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	6.67%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	5.19%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	2.22%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	2.22%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	1.48%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	0.74%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	0.74%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	0.74%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	0.74%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	48.15%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	14.81%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	6.67%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	4.44%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	4.44%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	2.22%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	2.22%
Sea-Ice Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine	2.22%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	2.22%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	1.48%
Microbial Mat	Environmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat	1.48%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	1.48%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	1.48%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	0.74%
Marine	Environmental → Aquatic → Marine → Inlet → Unclassified → Marine	0.74%
Marine	Environmental → Aquatic → Marine → Coastal → Sediment → Marine	0.74%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	0.74%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	0.74%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	0.74%
Subsea Pool Microbial Mat	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Subsea Pool Microbial Mat	0.74%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.74%
Polar Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Polar Marine	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001934	Estuary microbial communities from Chesapeake Bay, Maryland, USA - MOVE858	Environmental	Open in IMG/M
3300002482	Marine viral communities from the Pacific Ocean - ETNP_2_30	Environmental	Open in IMG/M
3300002484	Marine viral communities from the Pacific Ocean - ETNP_2_130	Environmental	Open in IMG/M
3300002514	Marine viral communities from the Pacific Ocean - ETNP_6_85	Environmental	Open in IMG/M
3300005514	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV263	Environmental	Open in IMG/M
3300005747	Seawater microbial communities from Vineyard Sound, MA, USA - control T14	Environmental	Open in IMG/M
3300006191	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNA	Environmental	Open in IMG/M
3300006332	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_0200m	Environmental	Open in IMG/M
3300006467	Coastal sediment microbial communities from Rhode Island, USA: Combined Assembly of Gp0121717, Gp0123912, Gp0123935	Environmental	Open in IMG/M
3300006735	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG	Environmental	Open in IMG/M
3300006737	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG	Environmental	Open in IMG/M
3300006750	Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG	Environmental	Open in IMG/M
3300006751	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG	Environmental	Open in IMG/M
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental	Open in IMG/M
3300006754	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG	Environmental	Open in IMG/M
3300006789	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG	Environmental	Open in IMG/M
3300006793	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG	Environmental	Open in IMG/M
3300006921	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG	Environmental	Open in IMG/M
3300006923	Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG	Environmental	Open in IMG/M
3300006925	Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG	Environmental	Open in IMG/M
3300006926	Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG	Environmental	Open in IMG/M
3300006929	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG	Environmental	Open in IMG/M
3300006947	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNA	Environmental	Open in IMG/M
3300006990	Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG	Environmental	Open in IMG/M
3300007345	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30	Environmental	Open in IMG/M
3300007960	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG	Environmental	Open in IMG/M
3300008050	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG	Environmental	Open in IMG/M
3300008216	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar	Environmental	Open in IMG/M
3300008220	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908	Environmental	Open in IMG/M
3300009149	Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG	Environmental	Open in IMG/M
3300009433	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330	Environmental	Open in IMG/M
3300009436	Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M Metagenome	Environmental	Open in IMG/M
3300009476	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110407	Environmental	Open in IMG/M
3300009512	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88	Environmental	Open in IMG/M
3300009529	Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaG	Environmental	Open in IMG/M
3300009544	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean- Svalbard ARC20M Metagenome	Environmental	Open in IMG/M
3300009550	Marine eukaryotic phytoplankton communities from Atlantic Ocean - South Atlantic ANT15 Metagenome	Environmental	Open in IMG/M
3300009604	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16	Environmental	Open in IMG/M
3300009679	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - CN13ID_155_C17_100m_0.8um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009786	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126	Environmental	Open in IMG/M
3300009790	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 Metagenome	Environmental	Open in IMG/M
3300010150	Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaG	Environmental	Open in IMG/M
3300010151	Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaG	Environmental	Open in IMG/M
3300010153	Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaG	Environmental	Open in IMG/M
3300010155	Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaG	Environmental	Open in IMG/M
3300010934	Microbial mat microbial communities from the Kallisti Limnes subsea pool, Santorini, Greece - 2-BIOTECH-ROV9-P3	Environmental	Open in IMG/M
3300012419	Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Palmer Station, Antarctica after 24hr light incubation - RNA10.B_24.20151111 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013010	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_DNA	Environmental	Open in IMG/M
3300017697	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)	Environmental	Open in IMG/M
3300017705	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_08 viral metaG	Environmental	Open in IMG/M
3300017713	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11	Environmental	Open in IMG/M
3300017714	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 35 SPOT_SRF_2012-08-15	Environmental	Open in IMG/M
3300017715	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_06 viral metaG	Environmental	Open in IMG/M
3300017720	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23	Environmental	Open in IMG/M
3300017721	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_09 viral metaG	Environmental	Open in IMG/M
3300017730	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 40 SPOT_SRF_2013-02-13	Environmental	Open in IMG/M
3300017741	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 44 SPOT_SRF_2013-06-19	Environmental	Open in IMG/M
3300017746	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 12 SPOT_SRF_2010-06-29	Environmental	Open in IMG/M
3300017748	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 16 SPOT_SRF_2010-10-21	Environmental	Open in IMG/M
3300017755	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09	Environmental	Open in IMG/M
3300017756	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22	Environmental	Open in IMG/M
3300017757	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22	Environmental	Open in IMG/M
3300017759	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28	Environmental	Open in IMG/M
3300017762	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 45 SPOT_SRF_2013-07-18	Environmental	Open in IMG/M
3300017763	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 33 SPOT_SRF_2012-06-20	Environmental	Open in IMG/M
3300017765	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28	Environmental	Open in IMG/M
3300020296	Marine microbial communities from Tara Oceans - TARA_A100000164 (ERX556002-ERR599140)	Environmental	Open in IMG/M
3300020438	Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)	Environmental	Open in IMG/M
3300020451	Marine microbial communities from Tara Oceans - TARA_B100001778 (ERX555927-ERR598996)	Environmental	Open in IMG/M
3300021373	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO282	Environmental	Open in IMG/M
3300022057	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v2)	Environmental	Open in IMG/M
3300022074	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)	Environmental	Open in IMG/M
3300022187	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)	Environmental	Open in IMG/M
3300022920 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_118_April2016_10_MG	Environmental	Open in IMG/M
3300022931 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_100_MG	Environmental	Open in IMG/M
3300023109 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_10_MG	Environmental	Open in IMG/M
3300023210 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_4_MG	Environmental	Open in IMG/M
3300024059 (restricted)	Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_2	Environmental	Open in IMG/M
3300024518 (restricted)	Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_2	Environmental	Open in IMG/M
3300024528 (restricted)	Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_23	Environmental	Open in IMG/M
3300025078	Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG (SPAdes)	Environmental	Open in IMG/M
3300025082	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG (SPAdes)	Environmental	Open in IMG/M
3300025085	Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG (SPAdes)	Environmental	Open in IMG/M
3300025098	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG (SPAdes)	Environmental	Open in IMG/M
3300025099	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG (SPAdes)	Environmental	Open in IMG/M
3300025103	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG (SPAdes)	Environmental	Open in IMG/M
3300025109	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG (SPAdes)	Environmental	Open in IMG/M
3300025118	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG (SPAdes)	Environmental	Open in IMG/M
3300025120	Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)	Environmental	Open in IMG/M
3300025122	Marine viral communities from the Pacific Ocean - ETNP_2_300 (SPAdes)	Environmental	Open in IMG/M
3300025128	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)	Environmental	Open in IMG/M
3300025132	Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)	Environmental	Open in IMG/M
3300025133	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG (SPAdes)	Environmental	Open in IMG/M
3300025151	Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)	Environmental	Open in IMG/M
3300025168	Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)	Environmental	Open in IMG/M
3300025543	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025803	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025818	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025828	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025869	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405 (SPAdes)	Environmental	Open in IMG/M
3300026495	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 24R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027788	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88 (SPAdes)	Environmental	Open in IMG/M
3300027856 (restricted)	Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_23	Environmental	Open in IMG/M
3300028125	Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - SB	Environmental	Open in IMG/M
3300028287	Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI060_120m	Environmental	Open in IMG/M
3300031227	Saline water microbial communities from Ace Lake, Antarctica - #232	Environmental	Open in IMG/M
3300031519	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2	Environmental	Open in IMG/M
3300031539	Soil microbial communities from Risofladan, Vaasa, Finland - UN-3	Environmental	Open in IMG/M
3300031556	Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CB9_538_SCM (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031605	Marine microbial communities from Western Arctic Ocean, Canada - CB9_32.1	Environmental	Open in IMG/M
3300031659	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #82	Environmental	Open in IMG/M
3300032277	Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month pyrrhotite	Environmental	Open in IMG/M
3300032373	Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 6-month pyrrhotite 2	Environmental	Open in IMG/M
3300033742	Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - 2018 seawater	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
GOS2267_1004633	3300001934	Marine	MSITSKVRQSVVLTADGQVQKLIAGSAANIGSANILSIFAQCTA
JGI25127J35165_11114631	3300002482	Marine	MSITSKVRQSVVLTADGQVQKLIAGSAANIGSANILSVFAQASNT
JGI25129J35166_10493983	3300002484	Marine	MSITSKVRQSVVLTADGQLQGLVNTATTSTATNLTKINIMTVFAQASAAD
JGI25133J35611_101516101	3300002514	Marine	MSITSKVRQSVILAADGQVQKLINTATTSTATNITKANIMTVFAQSSDADGE
Ga0066866_101427682	3300005514	Marine	MSITSKVRQSVVLAADGQVQKLISGTATDIGKANIMTVFAQ
Ga0076924_13899871	3300005747	Marine	MSITSKVKQSVILTADGQVQSLVAGSAANITKANIMTIYGQ
Ga0075447_102276762	3300006191	Marine	MGITSKVKQSIVLAADGQIQSLVAGSAANITKCNIMTIYGQASAADAEIKL
Ga0068500_13128605	3300006332	Marine	MSITSKVRQSIVLGASGQIQKLVNTKAGASTATNITKAQIMNV
Ga0099972_105515062	3300006467	Marine	MSITSKVKQSVVLTADGQVQKLINGTATNIGKASILSVFA
Ga0098038_12334512	3300006735	Marine	MSITSKVRQSVVLTADGQVQKLINGVATNIGSANILSVFA
Ga0098037_11485962	3300006737	Marine	MNFKENKIMSITSKVRQSVVLTSTGQVQGLVNTATTSTATNLTKINIMNVFGQATAANAE
Ga0098058_10857332	3300006750	Marine	MSITSKVRQSVVLTSTGQLQGLVNTATTSTATSLTKINIMNIFGQATAANAEI
Ga0098058_11936341	3300006750	Marine	MSITSKVRQSVVLAADGQVQKLISGTATDIGKANIMTVFAQSSAAD
Ga0098040_10878011	3300006751	Marine	MSITSKVRQSIVLAADGQVQKLVNTKAGASTATNITKANIMTVFAQSDDAD
Ga0098048_11876241	3300006752	Marine	MSITSKVRQSVVLTADGQVQKLVNGTATNIGSANIL
Ga0098044_11369653	3300006754	Marine	MSITSKVRQSVILAADGQVQSLVGGAAANITKANIMTVFAQ
Ga0098044_14114801	3300006754	Marine	MSITSKVRQSIVLAADGQVQKLVNTATASTATDIGKANIL
Ga0098054_12125831	3300006789	Marine	MSITSKVRQSIVLTADGQVQKLVNTATASTATDIGKANILTVF
Ga0098055_12740821	3300006793	Marine	MSITSKVRQSVVLTADGQVQKLVNTATTSTATDIGKANIMTVFAQ
Ga0098060_11235191	3300006921	Marine	MSITSKVRQSIILAADGQVQKLINTASTSTAANITKANIMTIFAQSD
Ga0098053_10579373	3300006923	Marine	MGVTSKVRQSVVLTADGQVQALVGGSAADITKANIMTVYAQSDGADGE
Ga0098053_10595052	3300006923	Marine	MGITSKVRQSVVLTADGQVQALVGGSAADITKANIMTVYAQSDGADGE
Ga0098053_10686791	3300006923	Marine	MSITSKVRQSIVLTGDGQVQKLVNTSTASTATDIGKANILTVFAQSSNSDAEV
Ga0098050_10777411	3300006925	Marine	MSITSKVRQSIILASDGQVQKLINTASTSTAANITKANIMTIFAQSDDA
Ga0098050_11417571	3300006925	Marine	MGITSKVRQSIVLAADGQVQKLVNTKAGASTATNITKAN
Ga0098057_10556763	3300006926	Marine	MSITSKVRQSVVLAADGQVQKLVNTATASTATNITKANIMTVFAQSSNS
Ga0098036_12791602	3300006929	Marine	MSITSKVRQSIVLTADGQVQKLINTETTSTATNITKANIMTVFAQSDAADGE
Ga0075444_102637472	3300006947	Marine	MGITSKVKQSIVLAADGQVQSLVAGSAANITKCNIMTIYGQGSAA
Ga0098046_10851061	3300006990	Marine	MSITSKVRQSIVLAADGQVQKLVNTATASTATDIGKANILTV
Ga0098046_11328242	3300006990	Marine	MSITSKVRQSVVLTADGQVQKLVNTATTSTATDIGKANIMTVFA
Ga0070752_12286001	3300007345	Aqueous	MSITSKVRQSVVLTADGQVQKLIAGSAANIGSANILSIFAQCTAADGEIKL
Ga0099850_12131051	3300007960	Aqueous	MSITSKVRQSVVLTADGQVQKLIAGSAANIGSASILS
Ga0098052_10766995	3300008050	Marine	MSITSKVRQSVILAADGQVQKLINTATTSTATNITKANIMTVFAQ
Ga0098052_11571932	3300008050	Marine	MGITSKVRQSVVLTADGQVQALVGGSAADITKANIMTVYAQSDAADGE
Ga0098052_14046902	3300008050	Marine	MSITSKVRQSIVLAADGQVQKLVNTATASTATNIAKANILTVFAQSSNS
Ga0114898_11455152	3300008216	Deep Ocean	MGVTSKVRQSVVLSADGQVQKLISGSAANITKANIM
Ga0114910_11402292	3300008220	Deep Ocean	MSITSKVRQSVVLTGDGQVQKLINGVATNIGTANILSVFAQASNS
Ga0114918_104506931	3300009149	Deep Subsurface	MSITSKVRQSVVLTADGQVQKLIAGSAANIGKANILSIFAQSTAAGGE
Ga0115545_11466081	3300009433	Pelagic Marine	MSITSKVRQSVVLTADGQVQKLVNTATSSTATNIGKASILTVFAQASDA
Ga0115008_103470753	3300009436	Marine	MSITSKVRQSVVLAADGQVQKLVSGVATNIGKASILSVFA
Ga0115555_13877232	3300009476	Pelagic Marine	MSSISSKVRQSVVLTADGQLQGLVNTSSTSTATNLLKVNIMNIFAQSSAADAEIK
Ga0115003_102751294	3300009512	Marine	MSITSKVKQSVILAADGQVQSLVAGSAANITKANIMTIYGQTSA
Ga0114919_106526261	3300009529	Deep Subsurface	MSITSKVRQSVVLAADGQVQALVAGSAANITKANIMTIY
Ga0115006_106850961	3300009544	Marine	MSITSKVKQSVVLTADGQVQKLISGAATNIGKASIL
Ga0115013_109036502	3300009550	Marine	MSITSKVRQSVVLTADGQVQKLINGTATNIGPANILSVFAQASNSDAEV
Ga0114901_12383222	3300009604	Deep Ocean	MSITSKVRQSVILTADGQMQALVNGSAANITKANIMTIFAQSS
Ga0115105_109372552	3300009679	Marine	MSITSKVRQSVVLTADGQVQKLISGSAANITKASILSIFV
Ga0114999_103381681	3300009786	Marine	MGITSKVRQSVILAADGQVQKLISGSAANITKANI
Ga0115012_109800022	3300009790	Marine	MSITSKVRQSVILSASGQIQKLISGTATNITAANIMN
Ga0098056_12378072	3300010150	Marine	MGITSKVRQSIVLAADGQVQKLVNTKAGASTATNITK
Ga0098061_12892721	3300010151	Marine	MGITSKVRQSIVLAADGQVQKLVNTKAGASTATNITKANIMT
Ga0098059_11804771	3300010153	Marine	MSITSKVRQSVILAADGQVQKLINTATTSTATNITKAN
Ga0098047_102917862	3300010155	Marine	MSITSKVRQSVILTASGQVQKLINTATTSTATNITKANIM
Ga0137844_11582892	3300010934	Subsea Pool Microbial Mat	MSITSKVRQSVILTASGQVQKLISGTATNITKANIMNVFAMS
Ga0138260_102193201	3300012419	Polar Marine	MSITSKVRQSVILAADGQVQALVAGSATNITKANIINIYGM
Ga0129327_101717363	3300013010	Freshwater To Marine Saline Gradient	MSITSKVRQSVVLTADGQVQKLIAGSAANIGSASILSIFAQCTAADG
Ga0180120_103318851	3300017697	Freshwater To Marine Saline Gradient	MSITSKVRQSVVLTADGQVQKLISGSAANIGSASI
Ga0180120_104474421	3300017697	Freshwater To Marine Saline Gradient	MSITSKVRQSVVLTADGQVQKLIAGSAANIGSASILSIF
Ga0181372_10263773	3300017705	Marine	MGITSKVRQSVVLTADGQVQALVGGSAADITKANIMTVYAQ
Ga0181391_10857022	3300017713	Seawater	MSITSKVRQTVVLTADGQLQSLVNTATTSTATNITKINIMNVYGMATAGD
Ga0181412_10528603	3300017714	Seawater	MSITSKVRQSVILAADGQMQALVNGSAANITKANIM
Ga0181370_10204171	3300017715	Marine	MGVTSKVRQSVVLTADGQVQALVGGSAADITKANIMTVYAQSD
Ga0181383_11135202	3300017720	Seawater	MSITSKVRQSVVLTADGQVQKLVNTATSSTATDIGKAN
Ga0181373_10247743	3300017721	Marine	MSITSKVRQSVVLTADGQVQKLIAGSAANIGSANILSVFAQASNSDAEVKLY
Ga0181373_10327052	3300017721	Marine	MSITSKVRQSVVLTADGQVQKLIAGSAANIGSANILSVFAQASNTD
Ga0181417_11556822	3300017730	Seawater	MSITSKVRQSVVLTADGQVQKLISGSAANITKASILSIFVQSTAADGEVKL
Ga0181421_11425662	3300017741	Seawater	MSITSKVRQTVVLTADGQLQGLVNTATTSTATNLTKINIMNVFAQSTDAD
Ga0181389_11372811	3300017746	Seawater	MSITSKVRQSVILAADGQVQSLVGGVATNITKANIMIVFS
Ga0181393_10935591	3300017748	Seawater	MSITSKVRQSVVLTADGQVQKLVNTATSSTATDIGKANILTVFAQASDADAEVKL
Ga0181411_10891592	3300017755	Seawater	MSITSKVRQSVVLTADGQVQKLIAGSAANIGSANILSVFA
Ga0181382_10676823	3300017756	Seawater	MSITSKVRQSVILTADGQVQKLIGGVATNIGSANILSVFAQASNTDAEVK
Ga0181420_10955462	3300017757	Seawater	MSITSKVRQSVVLTADGQVQKLIAGSAANIGSANILS
Ga0181420_11461801	3300017757	Seawater	MSITSKVRQSVVLTADGHVHKLINRVATNIASANILPVL
Ga0181414_10887221	3300017759	Seawater	MSITSKVRQSVVLTADGQVQKLIDGSAANIGSANI
Ga0181422_11258392	3300017762	Seawater	MSITSKVRQSVVLTGDGQVQKLIAGSAANIGSANILSIFA
Ga0181422_12084561	3300017762	Seawater	MSITSKVRQSVVLTADGQVQKLIAGTAANIGSANI
Ga0181410_12134652	3300017763	Seawater	MSITSKVRQSVILAADGQVQALVGGSAANITKANIMTVFAQSSAADG
Ga0181413_11459522	3300017765	Seawater	MSITSKVKQSVVLTADGQVQKLVNTATTSTATNIGKASILSVFAQSSAAD
Ga0181413_11747281	3300017765	Seawater	MSITSKVRQSVVLTADGQVQKLIAGTAANIGSANILSIFAQSTAADGE
Ga0211474_10324041	3300020296	Marine	MSITSKVRQSVILAADGQVQSLVGGSATNITKANIMTVFAMSSAADGE
Ga0211576_103398162	3300020438	Marine	MSITSKVRQSVVLTADGQVQKLIAGSAANIGSANI
Ga0211473_101670881	3300020451	Marine	MSITSKVRQSVVLTADGQVQKLINTATSSTATNIGKANILSVFAQSSDAD
Ga0213865_104769771	3300021373	Seawater	MSITSKVRQSVVLTADGQMQALVNGSAANITKANIMTIFAQSSNADA
Ga0212025_10531842	3300022057	Aqueous	MSITSKVRQSVVLTADGQVQKLIAGSAANIGKANILSISL
Ga0224906_11432532	3300022074	Seawater	MSITSKVRQSVVLTGDGQVQKLIAGSAANIGSANIL
Ga0196899_10708493	3300022187	Aqueous	MSITSKVRQSVVLTADGQVQKLVNGAATNIGKANIL
(restricted) Ga0233426_102283052	3300022920	Seawater	MSITSKVRQSVVLAADGQVQALVAGSAANITKANIMTIYGQ
(restricted) Ga0233433_102475761	3300022931	Seawater	MSITSKVRQSVVLAADGQVQALVAGSAANITKANIMTIYGQASAADAE
(restricted) Ga0233432_104082921	3300023109	Seawater	MSITSKVRQSVVLAADGQVQALVAGSAANITKANIMTIYGQAS
(restricted) Ga0233412_102343101	3300023210	Seawater	MSITSKVRQSVVLAADGQVQALVAGSAANITKANIM
(restricted) Ga0255040_100631314	3300024059	Seawater	MSITSKVRQSVVLAADGQVQALVAGSAANITKANIMTIYG
(restricted) Ga0255048_103298482	3300024518	Seawater	MSITSKVRQSVVLAADGQVQALVAGSAANITKANIMTI
(restricted) Ga0255045_102441832	3300024528	Seawater	MSITSKVRQSVVLAADGQVQALVAGSAANITKANIMTIYAQASAADAE
Ga0208668_10564451	3300025078	Marine	MGITSKVRQSVVLTADGQVQALVGGSAANITKANIMTVYAQSDA
Ga0208156_10454551	3300025082	Marine	MGVTSKVRQSVVLTADGQVQALVGGSAANITKANIMTVYAQSDA
Ga0208792_10034421	3300025085	Marine	MSITSKVRQSIILASDGQVQKLINTASTSTAANITKANIMTIFAQSSDVDGEIKL
Ga0208792_10460023	3300025085	Marine	MSITSKVRQSVILAADGQVQALVGGSAANITKANIMTVF
Ga0208792_10823272	3300025085	Marine	MGVTSKVRQSVALTGDGQVQALVGGSAANITKANIMT
Ga0208434_10151885	3300025098	Marine	MSITSKVRQSVILAADGQVQKLINTATTSTATNITKANIMTVFAQSSAADG
Ga0208434_10949981	3300025098	Marine	MSITSKVRQSVVLTADGQVQKLVNTATTSTATDIGKANI
Ga0208669_10673571	3300025099	Marine	MNFKENKIMSITSKVRQSVVLTSTGQVQGLVNTATTSTATNLTKINIMNVFGQATAAN
Ga0208013_10583181	3300025103	Marine	MGITSKVRQSVVLTADGQVQALVGGSAADITKANIMTVYAQSDAAD
Ga0208013_10936812	3300025103	Marine	MGITSKVRQSVVLTADGQVQALVGGSAADITKANIMTVYA
Ga0208553_10432812	3300025109	Marine	MSITSKVRQSIVLAADGQVQKLVNTKAGASTATNITKANIMTVFA
Ga0208790_10091541	3300025118	Marine	MSITSKVRQSIVLTADGQVQKLVNTKAGASTATNITKANIMTV
Ga0209535_10447661	3300025120	Marine	MSITSKVRQSVILAADGQVQSLVGGAAANITKANI
Ga0209434_10812023	3300025122	Marine	MGITSKVRQSVVLTADGQVQALVGGSAADITKANIMTVYAQSDA
Ga0209434_10889131	3300025122	Marine	MGVTSKVRQSVVLTADGQVQALVGGSAADITKANIMTVYAQSDA
Ga0208919_11042641	3300025128	Marine	MSITSKVRQSIVLAADGQVQKLVNTKAGASTATNITKAN
Ga0209232_11457111	3300025132	Marine	MSITSKVRQSVVLTADGQVQKLVNGTATNIVKANILTVFAQSSAADGEV
Ga0209232_12306072	3300025132	Marine	MSITSKVRQSVVLTADGQVQKLIAGSAANIGSANILSIF
Ga0208299_11331091	3300025133	Marine	MGITSKVRQSVVLTADGQVQALVGGSAADITKANIMTVYAQS
Ga0209645_11554821	3300025151	Marine	MSITSKVRQSIVLTGDGQVQKLVNTATASTATDIGKANIL
Ga0209337_11733071	3300025168	Marine	MGITSKVRQSVILAADGQVQKLISGSAANITKANIMT
Ga0208303_11047381	3300025543	Aqueous	MSITSKVRQSVVLTADGQVQKLIAGSAANIGSASILSIFAQ
Ga0208425_11144661	3300025803	Aqueous	MSITSKVRQSVVLTADGQVQKLIAGSAANIGSASILSIFAQCTAADGEIKLYN
Ga0208543_11162861	3300025810	Aqueous	MSITSKVRQSVVLTADGQVQKLISGSAANIGSANILSVFAQCSA
Ga0208542_11106852	3300025818	Aqueous	MSITSKVRQSVVLTADGQVQKLIAGSAANIGSASILSIFAQSTAADGEV
Ga0208547_11080641	3300025828	Aqueous	MSITSKVRQSVVLTADGQVQKLISGSAANIGSASILSIFAQST
Ga0209308_101275144	3300025869	Pelagic Marine	MSITSKVRQSVVLTADGQVQKLISGSAANIGSANILSVFAQCSAADG
Ga0247571_10183762	3300026495	Seawater	MSITSKVRQSVVLTADGQLQGLVNTATTSTATNLTKINIMNVLHNLLMQMLR
Ga0209711_102217762	3300027788	Marine	MSITSKVRQSVVLAADGQIQSLVAGSAANITKCNIMSVFM
(restricted) Ga0255054_100152918	3300027856	Seawater	MSITSKVRQSVVLAADGQVQALVAGSAANITKANI
Ga0256368_10118374	3300028125	Sea-Ice Brine	MSSISSKVRQSVVLAADGQVQALVAGSAANITKANI
Ga0256368_10933532	3300028125	Sea-Ice Brine	MSSISSKVRQSVVLAADGQVQALVAGSAANITKANIMTIYGQ
Ga0257126_11872771	3300028287	Marine	MSITSKVRQSVVLAADGQVQALVAGSAANITKANIMTIYAQASAADA
Ga0307928_100688621	3300031227	Saline Water	MAITSKVRQSVVLAADGQVQALVAGSAANITKANIMTIYGQASAADA
Ga0307488_105739012	3300031519	Sackhole Brine	MSSISSKVRQSVVLTADGQVQALVAGSAANITKANIMTIYGQASAADAEIK
Ga0307380_106322101	3300031539	Soil	MAITSKVKQSVVLAASGQLQSLVGGSAVNITKCNIMS
Ga0308142_10719121	3300031556	Marine	MSITSKVKQSVILAADGQVQSLVAGSAANITKANIMT
Ga0302132_100956943	3300031605	Marine	MGITSKVKQSIVLAADGQIQSLVAGSAANITKCNIMSVFMQASGANAEI
Ga0307986_103268951	3300031659	Marine	MGITSKVKQSIILAADGQIQSLVAGSAANITKCNIMS
Ga0316202_102622631	3300032277	Microbial Mat	MSITSKVKQSVVLTADGQVQKLVNTATTSTATNIGKASILSVFAQSSA
Ga0316204_104623211	3300032373	Microbial Mat	MSITSKVRQSVVLTADGQVQKLIAGSAANIGSASILSIFA
Ga0314858_090688_2_112	3300033742	Sea-Ice Brine	MSSISSKVRQSVVLAADGQVQALVAGSAANITKANIM

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters