Metagenome Family F058251

Basic Information
Family ID	F058251
Family Type	Metagenome
Number of Sequences	135
Average Sequence Length	49 residues
Representative Sequence	APLEQNVQAALSFTPISESGKQKLQEKVAPSRAAWENFLRTHEDSVTV
Number of Associated Samples	125
Number of Associated Scaffolds	135

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.48 %
% of genes near scaffold ends (potentially truncated)	91.11 %
% of genes from short scaffolds (< 2000 bps)	91.85 %
Associated GOLD sequencing projects	121
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Most Common Taxonomy
Group	Bacteria (88.889 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (8.889 % of family members)
Environment Ontology (ENVO)	Unclassified (37.778 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (34.074 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 44.74% β-sheet: 0.00% Coil/Unstructured: 55.26%
Feature Viewer

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Pfam ID	Name	% Frequency in 135 Family Scaffolds
PF09084	NMT1	10.37
PF13483	Lactamase_B_3	9.63
PF00117	GATase	4.44
PF07690	MFS_1	4.44
PF13379	NMT1_2	3.70
PF01192	RNA_pol_Rpb6	3.70
PF01844	HNH	2.96
PF08867	FRG	2.22
PF09722	Xre_MbcA_ParS_C	1.48
PF04909	Amidohydro_2	1.48
PF00248	Aldo_ket_red	1.48
PF00596	Aldolase_II	1.48
PF01402	RHH_1	1.48
PF04014	MazE_antitoxin	0.74
PF00857	Isochorismatase	0.74
PF03330	DPBB_1	0.74
PF02436	PYC_OADA	0.74
PF01850	PIN	0.74
PF03235	DUF262	0.74
PF02743	dCache_1	0.74
PF01717	Meth_synt_2	0.74
PF00271	Helicase_C	0.74
PF06831	H2TH	0.74
PF01118	Semialdhyde_dh	0.74
PF11860	Muramidase	0.74
PF08281	Sigma70_r4_2	0.74
PF05016	ParE_toxin	0.74
PF00501	AMP-binding	0.74
PF02604	PhdYeFM_antitox	0.74
PF00398	RrnaAD	0.74

COG ID	Name	Functional Category	% Frequency in 135 Family Scaffolds
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	10.37
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	10.37
COG1758	DNA-directed RNA polymerase, subunit K/omega	Transcription [K]	3.70
COG0030	16S rRNA A1518 and A1519 N6-dimethyltransferase RsmA/KsgA/DIM1 (may also have DNA glycosylase/AP lyase activity)	Translation, ribosomal structure and biogenesis [J]	0.74
COG0266	Formamidopyrimidine-DNA glycosylase	Replication, recombination and repair [L]	0.74
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	0.74
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.74
COG1479	DNAse/DNA nickase specific for phosphorothioated or glycosylated phage DNA, GmrSD/DndB/SspE family, contains DUF262 and HNH nuclease domains	Defense mechanisms [V]	0.74
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.74
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	0.74
COG2972	Sensor histidine kinase YesM	Signal transduction mechanisms [T]	0.74
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.89 %
Unclassified	root	N/A	11.11 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.89 %
Unclassified	root	N/A	11.11 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.89 %
Unclassified	root	N/A	11.11 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	53.33 %
Unclassified	root	N/A	11.11 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.96 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	51.11 %
Unclassified	root	N/A	11.11 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.48 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.74 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.74 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.74 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	51.11 %
Unclassified	root	N/A	11.11 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.48 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.74 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.74 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.74 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.74 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	49.63 %
Unclassified	root	N/A	11.11 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.48 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.74 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.74 %
Methylophilaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae	0.74 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.74 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	48.15 %
Unclassified	root	N/A	11.11 %
Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19	1.48 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.48 %
Methylotenera	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Methylotenera	0.74 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.74 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.74 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.74 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	48.15 %
Unclassified	root	N/A	11.11 %
Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19	1.48 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.48 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	0.74 %
Pseudomonas cavernicola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas cavernicola	0.74 %
Methylotenera	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Methylotenera	0.74 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000363\|ICChiseqgaiiFebDRAFT_13177608	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	514	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10084020	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	795	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1007810	All Organisms → cellular organisms → Bacteria	2048	Open in IMG/M
3300000787\|JGI11643J11755_11543937	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300000881\|JGI10215J12807_1358378	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300000893\|AP72_2010_repI_A001DRAFT_1061700	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300000955\|JGI1027J12803_100495979	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300000955\|JGI1027J12803_106938457	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	556	Open in IMG/M
3300001139\|JGI10220J13317_12329003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas cavernicola	992	Open in IMG/M
3300002155\|JGI24033J26618_1055908	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	574	Open in IMG/M
3300002243\|C687J29039_10257858	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	606	Open in IMG/M
3300004808\|Ga0062381_10425226	Not Available	514	Open in IMG/M
3300005294\|Ga0065705_10335945	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	978	Open in IMG/M
3300005295\|Ga0065707_10808704	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300005334\|Ga0068869_100244444	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1431	Open in IMG/M
3300005338\|Ga0068868_101369073	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	659	Open in IMG/M
3300005356\|Ga0070674_100219753	All Organisms → cellular organisms → Bacteria	1477	Open in IMG/M
3300005365\|Ga0070688_101011746	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	661	Open in IMG/M
3300005434\|Ga0070709_11090675	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	638	Open in IMG/M
3300005440\|Ga0070705_101721271	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	530	Open in IMG/M
3300005445\|Ga0070708_100574346	All Organisms → cellular organisms → Bacteria	1063	Open in IMG/M
3300005518\|Ga0070699_100216672	All Organisms → cellular organisms → Bacteria	1705	Open in IMG/M
3300005563\|Ga0068855_100187326	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2336	Open in IMG/M
3300005713\|Ga0066905_100064533	All Organisms → cellular organisms → Bacteria	2322	Open in IMG/M
3300005713\|Ga0066905_100507246	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300005764\|Ga0066903_106492940	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300005841\|Ga0068863_101894002	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	606	Open in IMG/M
3300006224\|Ga0079037_101309651	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19	721	Open in IMG/M
3300006755\|Ga0079222_10045898	All Organisms → cellular organisms → Bacteria	1994	Open in IMG/M
3300006794\|Ga0066658_10550932	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	627	Open in IMG/M
3300006806\|Ga0079220_10603010	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	781	Open in IMG/M
3300006806\|Ga0079220_11539851	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300006852\|Ga0075433_10261703	All Organisms → cellular organisms → Bacteria	1533	Open in IMG/M
3300006854\|Ga0075425_100825523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Methylotenera	1062	Open in IMG/M
3300006871\|Ga0075434_100298817	All Organisms → cellular organisms → Bacteria	1630	Open in IMG/M
3300006871\|Ga0075434_101055074	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300006871\|Ga0075434_101757548	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300006904\|Ga0075424_102306817	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	565	Open in IMG/M
3300007076\|Ga0075435_100693087	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300009053\|Ga0105095_10827647	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	519	Open in IMG/M
3300009100\|Ga0075418_11876549	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	652	Open in IMG/M
3300009137\|Ga0066709_102423812	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	712	Open in IMG/M
3300009148\|Ga0105243_10444441	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1215	Open in IMG/M
3300009148\|Ga0105243_12836378	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	525	Open in IMG/M
3300009792\|Ga0126374_10689424	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	767	Open in IMG/M
3300010029\|Ga0105074_1054224	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	712	Open in IMG/M
3300010047\|Ga0126382_11358731	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	646	Open in IMG/M
3300010326\|Ga0134065_10028544	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1623	Open in IMG/M
3300010362\|Ga0126377_10181437	All Organisms → cellular organisms → Bacteria	2003	Open in IMG/M
3300010366\|Ga0126379_10435249	All Organisms → cellular organisms → Bacteria	1369	Open in IMG/M
3300010375\|Ga0105239_10182112	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2351	Open in IMG/M
3300010399\|Ga0134127_12762828	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	571	Open in IMG/M
3300010403\|Ga0134123_12912253	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	547	Open in IMG/M
3300011427\|Ga0137448_1010833	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1934	Open in IMG/M
3300011432\|Ga0137428_1150484	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	684	Open in IMG/M
3300011438\|Ga0137451_1053513	All Organisms → cellular organisms → Bacteria	1187	Open in IMG/M
3300012040\|Ga0137461_1130349	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	732	Open in IMG/M
3300012167\|Ga0137319_1118857	Not Available	529	Open in IMG/M
3300012200\|Ga0137382_10644515	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	758	Open in IMG/M
3300012210\|Ga0137378_10317310	All Organisms → cellular organisms → Bacteria	1449	Open in IMG/M
3300012211\|Ga0137377_10229438	All Organisms → cellular organisms → Bacteria	1783	Open in IMG/M
3300012228\|Ga0137459_1062183	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1067	Open in IMG/M
3300012355\|Ga0137369_10292333	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1212	Open in IMG/M
3300012582\|Ga0137358_11061399	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300012912\|Ga0157306_10129480	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	771	Open in IMG/M
3300012971\|Ga0126369_11125585	Not Available	874	Open in IMG/M
3300012976\|Ga0134076_10471472	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300012985\|Ga0164308_10376706	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1153	Open in IMG/M
3300012987\|Ga0164307_10729963	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	780	Open in IMG/M
3300013308\|Ga0157375_10513609	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1362	Open in IMG/M
3300014296\|Ga0075344_1033723	Not Available	859	Open in IMG/M
3300014315\|Ga0075350_1084664	Not Available	731	Open in IMG/M
3300014745\|Ga0157377_11067319	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	616	Open in IMG/M
3300014870\|Ga0180080_1101366	Not Available	512	Open in IMG/M
3300014883\|Ga0180086_1015691	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19	1653	Open in IMG/M
3300014968\|Ga0157379_11070665	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	771	Open in IMG/M
3300015052\|Ga0137411_1039077	Not Available	1149	Open in IMG/M
3300015052\|Ga0137411_1206436	Not Available	1152	Open in IMG/M
3300015372\|Ga0132256_100137371	All Organisms → cellular organisms → Bacteria	2435	Open in IMG/M
3300015374\|Ga0132255_100281441	All Organisms → cellular organisms → Bacteria	2388	Open in IMG/M
3300015374\|Ga0132255_102948420	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300016319\|Ga0182033_10225056	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1509	Open in IMG/M
3300016387\|Ga0182040_10302354	All Organisms → cellular organisms → Bacteria	1224	Open in IMG/M
3300017944\|Ga0187786_10059096	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1181	Open in IMG/M
3300017966\|Ga0187776_10982882	Not Available	619	Open in IMG/M
3300017997\|Ga0184610_1064984	All Organisms → cellular organisms → Bacteria	1104	Open in IMG/M
3300018028\|Ga0184608_10326679	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	674	Open in IMG/M
3300018063\|Ga0184637_10418571	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	794	Open in IMG/M
3300018063\|Ga0184637_10583687	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	636	Open in IMG/M
3300018064\|Ga0187773_10069862	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1664	Open in IMG/M
3300018074\|Ga0184640_10051828	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1699	Open in IMG/M
3300018079\|Ga0184627_10423658	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	692	Open in IMG/M
3300018081\|Ga0184625_10134764	All Organisms → cellular organisms → Bacteria → Acidobacteria	1287	Open in IMG/M
3300018082\|Ga0184639_10110688	All Organisms → cellular organisms → Bacteria	1453	Open in IMG/M
3300018429\|Ga0190272_10248789	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1332	Open in IMG/M
3300018431\|Ga0066655_10146819	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1394	Open in IMG/M
3300018432\|Ga0190275_10161786	Not Available	2076	Open in IMG/M
3300018468\|Ga0066662_12395432	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	555	Open in IMG/M
3300018469\|Ga0190270_10943458	Not Available	884	Open in IMG/M
3300018482\|Ga0066669_10417684	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1142	Open in IMG/M
3300019377\|Ga0190264_10083233	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1435	Open in IMG/M
3300019889\|Ga0193743_1128063	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	905	Open in IMG/M
3300020004\|Ga0193755_1064271	All Organisms → cellular organisms → Bacteria	1190	Open in IMG/M
3300020034\|Ga0193753_10201306	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	913	Open in IMG/M
3300020060\|Ga0193717_1015387	All Organisms → cellular organisms → Bacteria	3455	Open in IMG/M
3300021073\|Ga0210378_10064255	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1442	Open in IMG/M
3300022756\|Ga0222622_10407144	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	959	Open in IMG/M
3300025157\|Ga0209399_10277136	Not Available	662	Open in IMG/M
3300025174\|Ga0209324_10225947	All Organisms → cellular organisms → Bacteria	1238	Open in IMG/M
3300025313\|Ga0209431_10118516	All Organisms → cellular organisms → Bacteria	2088	Open in IMG/M
3300025909\|Ga0207705_11001032	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	646	Open in IMG/M
3300025931\|Ga0207644_11603855	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300025958\|Ga0210069_1059215	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300025972\|Ga0207668_10425477	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1128	Open in IMG/M
3300026058\|Ga0208421_1014483	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300026088\|Ga0207641_11668478	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	639	Open in IMG/M
3300027577\|Ga0209874_1009947	All Organisms → cellular organisms → Bacteria	2808	Open in IMG/M
3300027639\|Ga0209387_1030167	All Organisms → cellular organisms → Bacteria	1104	Open in IMG/M
3300027654\|Ga0209799_1092468	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	685	Open in IMG/M
3300027722\|Ga0209819_10124955	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	899	Open in IMG/M
3300027765\|Ga0209073_10074003	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1163	Open in IMG/M
3300027775\|Ga0209177_10086368	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	969	Open in IMG/M
3300027787\|Ga0209074_10394494	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	578	Open in IMG/M
3300027815\|Ga0209726_10095460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1818	Open in IMG/M
3300028379\|Ga0268266_12324884	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	507	Open in IMG/M
3300031912\|Ga0306921_11310911	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300031949\|Ga0214473_10680922	All Organisms → cellular organisms → Bacteria	1124	Open in IMG/M
3300032122\|Ga0310895_10704526	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	525	Open in IMG/M
3300032180\|Ga0307471_101625381	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300032180\|Ga0307471_103425417	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	562	Open in IMG/M
3300032421\|Ga0310812_10243671	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	789	Open in IMG/M
3300033406\|Ga0316604_10500569	Not Available	668	Open in IMG/M
3300033408\|Ga0316605_11395985	Not Available	679	Open in IMG/M
3300033480\|Ga0316620_10680209	Not Available	976	Open in IMG/M
3300034151\|Ga0364935_0034775	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1427	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.26%
Host-Associated	Host-Associated	20.74%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.74%
Plants	Host-Associated → Plants	20.74%
Aquatic	Environmental → Aquatic	18.52%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.81%
Sediment	Environmental → Aquatic → Sediment	12.59%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.93%
Freshwater	Environmental → Aquatic → Freshwater	4.44%
Marine	Environmental → Aquatic → Marine	0.74%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.74%
Floodplain	Environmental → Terrestrial → Floodplain	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	12.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.37%
Loam	Environmental → Terrestrial → Soil → Loam	8.15%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.67%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.44%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.44%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.22%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.48%
Sand	Environmental → Terrestrial → Soil → Sand	1.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.48%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.74%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.74%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.74%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	12.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.37%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.15%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.93%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.19%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.44%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.44%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.70%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.22%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.96%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.48%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	1.48%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.48%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.74%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.74%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	0.74%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.74%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.74%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.89%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	5.93%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.93%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.93%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.19%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	5.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.19%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.22%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.22%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.22%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.22%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.22%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.96%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.48%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.48%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.48%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.48%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.48%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	1.48%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.48%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.48%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.48%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.74%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.74%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.74%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.74%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.74%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	0.74%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.74%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.74%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.74%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000881	Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soil	Environmental	Open in IMG/M
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001139	Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soil	Environmental	Open in IMG/M
3300002155	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX- M7	Host-Associated	Open in IMG/M
3300002243	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_2	Environmental	Open in IMG/M
3300004808	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1Fresh	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010029	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011427	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT418_2	Environmental	Open in IMG/M
3300011432	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT718_2	Environmental	Open in IMG/M
3300011438	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2	Environmental	Open in IMG/M
3300012040	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT746_2	Environmental	Open in IMG/M
3300012167	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT333_2	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012228	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT700_2	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014296	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D1	Environmental	Open in IMG/M
3300014315	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleC_D1	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014870	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT560_16_10D	Environmental	Open in IMG/M
3300014883	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT760_16_10D	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019889	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2c2	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020034	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2	Environmental	Open in IMG/M
3300020060	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c2	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025157	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3 (SPAdes)	Environmental	Open in IMG/M
3300025174	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 3	Environmental	Open in IMG/M
3300025313	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)	Environmental	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025958	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026058	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D1 (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027639	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027815	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033406	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_CT	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300034151	Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F058251

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiFebDRAFT_131776082	3300000363	Soil	PVASVIIGCELMAPLEQNVQAALNFTPISESGKQKLQEKLAPSRSAWEDFLRDHEDTIAV
AF_2010_repII_A1DRAFT_100840202	3300000597	Forest Soil	IGCEQIARLEENVQAALHFTPMSESGKQKLQERVAPSRSAWENFLRSHVDSVTV*
AF_2010_repII_A100DRAFT_10078103	3300000655	Forest Soil	CEQVVPLEQNVQAALAFTPMNESGRQRLQEKVAPSRSAWQQFLQSHDDSLPV*
JGI11643J11755_115439372	3300000787	Soil	ASVVIGCEQIAPLEQNVQAAMIFRPISESDKQRLQEKVAPSRSTWENFLRTHEDSVAV*
JGI10215J12807_13583782	3300000881	Soil	TPISESSKQKLQDKVAPSRSAWQNFLRTHEDSVTV*
AP72_2010_repI_A001DRAFT_10617001	3300000893	Forest Soil	VPLEQNVQAALAFTPMNESGRQRLQEKVAPSRSAWQQFLQSHDDSLPV*
JGI1027J12803_1004959791	3300000955	Soil	EQMAPLEQNVQAALAFTPMNESGKQKLQEKVAPSRSAWQQFLKSHDDSLPV*
JGI1027J12803_1069384571	3300000955	Soil	CVVIGCEQMAPLEQNVQAALNFTPMSESGKQKLQEKVAPSRSAWQRFLQSHDDSV
JGI10220J13317_123290032	3300001139	Soil	ALNFTPISESSKQKLQDKVARSRSAWQNFLRTHEDSVTV*
JGI24033J26618_10559082	3300002155	Corn, Switchgrass And Miscanthus Rhizosphere	AALSYTPASESDTQRLREKIASSRSAWENFLRTHENGTVV*
C687J29039_102578581	3300002243	Soil	CEQLATLEQNIQAALNFTPISESDKQKLREKVAPSRSAWQGFLQHHDDSAAV*
Ga0062381_104252262	3300004808	Wetland Sediment	QAAINFTPIGADGKQKLQEKVAPSRSAWEQFLRTHEDTIVV*
Ga0065705_103359452	3300005294	Switchgrass Rhizosphere	AASFTPMSENGKQRVKEKVAPSRAAWENFLRTHDDSAVV*
Ga0065707_108087042	3300005295	Switchgrass Rhizosphere	AALTFTPISESGKEKLQEKVAPSRSAWENFLRTHEDSVAV*
Ga0068869_1002444441	3300005334	Miscanthus Rhizosphere	ASVIIGCEQMALLGQSIQAALSFTPASDSDKQRLREKIASSRSAWENFLRTHENGTVV*
Ga0068868_1013690731	3300005338	Miscanthus Rhizosphere	PVASVIIGCEEMAPLEENVLAAASFTPMSENGKQRVKEKVAPSRAAWENFLRTHEDSAVV
Ga0070674_1002197532	3300005356	Miscanthus Rhizosphere	VASVIIGCAQMALLGQNIQAALSFTPARESDKQRLREKIAPSRSAWENFLRTHEDGTVV*
Ga0070688_1010117462	3300005365	Switchgrass Rhizosphere	AALSFTPARESDKQRLREKIAPSRSAWENFLRTHEDGTVV*
Ga0070709_110906752	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	IQVAQSFTPVSESGKQRLREKLAPSRSAWENFLRAHEDGPIA*
Ga0070705_1017212711	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	PVASVIIGCEQLAPLEQNVQAAMNFTPISESGKQKLQEQVAPSRAAWENFLRSHEDSAAV
Ga0070708_1005743462	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	QAALAFTPMNESGKQKLQEKVAPSRSAWQGFLRSHDDSLPV*
Ga0070699_1002166721	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	APLEQNVQAALAFTPMNESGRQRLQEKVAPSRSAWQGFLRSHDDSMPV*
Ga0068855_1001873261	3300005563	Corn Rhizosphere	NIQAALSFTPARESDKQRLREKIAPSRSAWENFLRTHEDGTVV*
Ga0066905_1000645331	3300005713	Tropical Forest Soil	VASVVIGCEQIARLEENVQAALHFTPMSESGKQKLQERVVPSRSAWQNFLRSHEDSVTV*
Ga0066905_1005072461	3300005713	Tropical Forest Soil	VIGCEQVVPLEQNVQTALAFTPMNESGRQRLQEKVAPSRSAWQQLLQSHDDSLPV*
Ga0066903_1064929402	3300005764	Tropical Forest Soil	VASVVIGCEQIARLEENVQAAMHFTPMSESGKQKLQERVAPSRSAWENFLRSHVDSLTA*
Ga0068863_1018940021	3300005841	Switchgrass Rhizosphere	CEEMAPLEENVLAAASFTPMSENGKQRVKEKVAPSRAAWENFLRTHEDSAVV*
Ga0079037_1013096511	3300006224	Freshwater Wetlands	GVEQMALLEENVQTARAFTPMTDSHRQRLQEKVAPSRAAWQRFLQSHGDSLPA*
Ga0079222_100458983	3300006755	Agricultural Soil	ASVIIGCEQIAPLEQNIQAALNFTPASDSRKQQLREKLAPARSAWENFLRTHEDGTVA*
Ga0066658_105509322	3300006794	Soil	EQMARLEQNIQAARSFVAMNDGEKQKLRDAVAPSRSAWHRFLESHDDSLPV*
Ga0079220_106030102	3300006806	Agricultural Soil	MSFTPARESDKQRLREKIAPSRSAWENFLRTHEDGTVV*
Ga0079220_115398512	3300006806	Agricultural Soil	LTQPVASVIIGCEEMAPLEENVLAAASFTPMSENGKQRVKEKVAPSRAAWENFLRTHEDSAVV*
Ga0075433_102617031	3300006852	Populus Rhizosphere	VVIGCEQMARLEENVQAALNFTPISESGKQKLQQKVAPSRSAWQNFLRDHDDSAVV*
Ga0075425_1008255231	3300006854	Populus Rhizosphere	PMNESGKQKLQEKVAPSRSAWQGFLRSHDDSMPV*
Ga0075434_1002988171	3300006871	Populus Rhizosphere	NLSQPVASVIIGCAQMALLGQNIQAALSFTPARESDKQRLREKIAPSRSAWENFLRTHEDGTVV*
Ga0075434_1010550741	3300006871	Populus Rhizosphere	VASVVIGCEQMAPLEQNVQAALAFTPLNESGKQRLQEKVAPSRSAWQRFLNSHDDSLPA*
Ga0075434_1017575482	3300006871	Populus Rhizosphere	AALAFTPMNESGKQKLQEKVAPSRSAWQGFLRSHDDSLPV*
Ga0075424_1023068172	3300006904	Populus Rhizosphere	CEQMAPLEQNVQAALNFTPMTESGKQKLQEKVAPSRSAWQNFLRTHEDSVAV*
Ga0075435_1006930871	3300007076	Populus Rhizosphere	QNVQAALAFTPMNESGKQKLQEKIAPSRSAWQQFLKSHDDSLPV*
Ga0105095_108276471	3300009053	Freshwater Sediment	NFTPISESGKQKLQEKVAPSRSAWENFLRSHEDSVAV*
Ga0075418_118765491	3300009100	Populus Rhizosphere	VASVIIGCEEMAPLEENVLAAASFTPMSENGKQRVKEKVAPSRAAWENFLRTHEDSAVV*
Ga0066709_1024238122	3300009137	Grasslands Soil	MEKKGPLEENVQVARSFTPMNESGKQKLREKVAPSRSAWQRFLRSHDDSLPV*
Ga0105243_104444412	3300009148	Miscanthus Rhizosphere	FTPASESDKQRLREKIASSCSAWENFLRTHEDGTVV*
Ga0105243_128363782	3300009148	Miscanthus Rhizosphere	LEQNVQAALNFTPLSEGSKQKLQEKVAPSRSAWENFLRSHEDSVTV*
Ga0126374_106894241	3300009792	Tropical Forest Soil	LEENVQAAMHFTPMSESGKQKLQERVAPSRSAWENFLRSHVDSVTV*
Ga0105074_10542242	3300010029	Groundwater Sand	CVVIGCEQMARLEENVQAALDFTPISESGKQRLQEKVAPSRSAWEISCGHMRIQ*
Ga0126382_113587311	3300010047	Tropical Forest Soil	LEENVQAAMHFTPMSESGKQKLQERVAPSRSAWENFLRSHVDSLTV*
Ga0134065_100285443	3300010326	Grasslands Soil	VIGVEQMARLEQNIQAARSFVAMNDGEKQKLRDAVAPSRSAWHRFLESHDDSLPV*
Ga0126377_101814373	3300010362	Tropical Forest Soil	PMSEDEKQKLQEKVAPSRSAWQRFLQSHDDLLPA*
Ga0126379_104352491	3300010366	Tropical Forest Soil	NVRAALAFTPMSETNRQRLQEKVAPSRSAWQQFLQSHDDSCPV*
Ga0105239_101821121	3300010375	Corn Rhizosphere	QMPLLGQNIQAVLSYTPASESDKQRLREKIAPSRSAWENFLRTHEDGTVV*
Ga0134127_127628281	3300010399	Terrestrial Soil	SVIIGCEQLAPLEQNVQAALNFTPMSEGGKQKLQEKVAPSRSAWENFLRSHEDSVTV*
Ga0134123_129122532	3300010403	Terrestrial Soil	ALNFTPITENEKERVKEKVAPSRSAWENFLRTHEDSAVV*
Ga0137448_10108331	3300011427	Soil	MAPLEQNVHAVLNFTPISEHGKQTLQEKVAPSQSAWDNFLGIHADSVMV*
Ga0137428_11504841	3300011432	Soil	MVRLEENVQAALNFTPISESGKQKLQEKVAPSRSAWQNFLRNHDDSVTV*
Ga0137451_10535132	3300011438	Soil	PLEHNVQAALNFTPISESNKQKLQEKVAPSRSAWQNYLRRHEDTAV*
Ga0137461_11303492	3300012040	Soil	VIGCEQMARLEENVQAALNFTPISESAKQRLQDKVAPSRAAWQNFLRSHNDTIAV*
Ga0137319_11188572	3300012167	Soil	QVAMNFTPIEETGKHKLQEKVAPSRSAWEQFLRTYEDSVTV*
Ga0137382_106445152	3300012200	Vadose Zone Soil	NFTPISESVKQKLQEKVAPSRSAWEKFLESHEDSVTV*
Ga0137378_103173101	3300012210	Vadose Zone Soil	AALNFTPISESGRQRLQEKVAPSRSAWENFLRTHEDSLPV*
Ga0137377_102294381	3300012211	Vadose Zone Soil	QNVQAAMNFTPISESDKQKLQEKVAPSRSAWENFLRTHEDSVTV*
Ga0137459_10621832	3300012228	Soil	LAPLEQNVQVAMNFTPIEETGKHKLQEKVAPSRSAWEQFLRTYEDSVTV*
Ga0137369_102923332	3300012355	Vadose Zone Soil	MAPLEQNVQAALNFTPISESGKQKLQEKVTPSRSAWQNFPRTHEDSVTV*
Ga0137358_110613991	3300012582	Vadose Zone Soil	EQNVQAAMNFTPISESGRQRLQEKVAPSRSTWENYLRTHEDSVTV*
Ga0157306_101294802	3300012912	Soil	ALLGQNIQAALSFTPARESDKQRLREKIAPSRSAWENFLRTHEDGTVV*
Ga0126369_111255851	3300012971	Tropical Forest Soil	PLEQNVQAAIRFTPISESGKQRLRERVAPSRSAWENFLRNHDDSIAMKA*
Ga0134076_104714721	3300012976	Grasslands Soil	QAALNFTPISESGKQRLQEKVAPSRSAWENFLRTHEDSLPV*
Ga0164308_103767061	3300012985	Soil	TPMSENGKQRVKEKVAPSRAAWENFLRTHEDSAVV*
Ga0164307_107299631	3300012987	Soil	NLTQPVASVIIGCEEMAPLEENVLAAASFTPMSENGKQRVKEKVAPSRAAWENFLRTHEDSAVV*
Ga0157375_105136091	3300013308	Miscanthus Rhizosphere	IQAALSFTPARESDKQRLREKIAPSRSAWENFLRTHEDGTVV*
Ga0075344_10337231	3300014296	Natural And Restored Wetlands	VIIGCEHLSPLEENIQAAINFSPISDDAKQRLQEKVAPSRSAWENFLRHHEDSATV*
Ga0075350_10846642	3300014315	Natural And Restored Wetlands	LSPLEENIQAAINFSPISDDAKQRLQEKVAPSRSAWENFLRHHEDSATV*
Ga0157377_110673191	3300014745	Miscanthus Rhizosphere	VLAAASFTPMSENGKQRVKEKVAPSRAAWENFLRTHEDSAVV*
Ga0180080_11013662	3300014870	Soil	EQNVQVAMNFTPIEETGKHKLQEKVAPSRSAWEQFLRTHEDSVTV*
Ga0180086_10156911	3300014883	Soil	TAHLEQNVQAALNFTPISESGKQKLQEKVAPSRSAWQGFLKSHDASLAV*
Ga0157379_110706652	3300014968	Switchgrass Rhizosphere	MALLGQNIQAALSFTPARESDKQRLREKIAPSRSAWENFLRTHEDGTVV*
Ga0137411_10390773	3300015052	Vadose Zone Soil	AMNFTPISESVKQKLQEKVAPSRSAWEKFLESHEDSVTV*
Ga0137411_12064361	3300015052	Vadose Zone Soil	AAMNFTPISESVKQKLQEKVAPSRSAWEKFLESHEDSVTV*
Ga0132256_1001373714	3300015372	Arabidopsis Rhizosphere	EEMAPLEENVLAAASFTPMSENGKQRVKEKVAPSRAAWENFLRTHEDSAVV*
Ga0132255_1002814411	3300015374	Arabidopsis Rhizosphere	APLEQNIHAALNFTPMSESGKQKLQEKVAPSRWAWQRFLESHDDSAAV*
Ga0132255_1029484202	3300015374	Arabidopsis Rhizosphere	GCEQLAPLEQNVQAALNFTPMSEGGKQKLQEKVAPSRSAWENFLRSHEDSVTV*
Ga0182033_102250561	3300016319	Soil	LEQNIQAALNFTPMSESGKERVREKVAPSRSAWENFLRNHDDRSQ
Ga0182040_103023542	3300016387	Soil	CEQMTPLEQNIQAALNFTPMSESGKERVREKVAPSRSAWENFLRNHDDRSQ
Ga0187786_100590962	3300017944	Tropical Peatland	FTPISESGKQKLQEKVAPSRAAWENFLRTHEDSVTV
Ga0187776_109828822	3300017966	Tropical Peatland	TPISESGKQKLQEKVAPSRAAWENFLRTHEDSVTV
Ga0184610_10649841	3300017997	Groundwater Sediment	SVVIGCEQMARLEENVQAALNFTPISESGKQKLQEKVAPSRSAWENFLRSHEDSVTV
Ga0184608_103266792	3300018028	Groundwater Sediment	LEENVQAAMHFTPMSESNKQKLQERVAPSRSAWENFLRSHVDSVAV
Ga0184637_104185711	3300018063	Groundwater Sediment	NVQAALNFTPISEGGKQKLQEKVAPSRAAWQNFLRSHDDTIAV
Ga0184637_105836871	3300018063	Groundwater Sediment	QLAPLEQNVQAAMNFIPISESGKQKLQEKVAPSRSAWENFLRTHEDSVAV
Ga0187773_100698621	3300018064	Tropical Peatland	APLEQNVQAALSFTPISESGKQKLQEKVAPSRAAWENFLRTHEDSVTV
Ga0184640_100518281	3300018074	Groundwater Sediment	VIGCEQLAPLEQNVQAALNFTPISESGKQKLQEKVAPSRAAWQNFLRTHEDTATV
Ga0184627_104236581	3300018079	Groundwater Sediment	NVQAAINFTPMSESGKEKLQEKVAPSRSAWENFLRTHEDSVTV
Ga0184625_101347641	3300018081	Groundwater Sediment	QPVASVVIGCEQMARLEENVQAALNFTPISENGKQKLQEKVAPSRAAWQNFLRSHDDSVA
Ga0184639_101106885	3300018082	Groundwater Sediment	VVIGCEQLAPLEQNVQAALNFTPISESGKQKLQEKVAPSRAAWQNFLRSHDDTIAV
Ga0190272_102487892	3300018429	Soil	FTPMDESGKQKLQEKVAPSRSAWENFLRTHEDTIPV
Ga0066655_101468191	3300018431	Grasslands Soil	RLEQNIQAARSFVAMNDGEKQKLRDAVAPSRSAWHRFLESHDDSLPV
Ga0190275_101617863	3300018432	Soil	TPMGESAKQRLQEKVAPSRSAWENFLRTHEDAATV
Ga0066662_123954322	3300018468	Grasslands Soil	PLEQNVQAALNFTPMSENGKQKLQEKVAPSRSAWQRFLQSHDDSVAV
Ga0190270_109434581	3300018469	Soil	VASVIIGCEQLAPLEQNVQAAMNFTPMGETGRHKLQEEVAPSRSAWENFLRTHEDTIPV
Ga0066669_104176843	3300018482	Grasslands Soil	APLEQNVQAALNFTPISETGKQKLQEKVAPSRSAWENFLRAHEDSVAV
Ga0190264_100832331	3300019377	Soil	SQPVASVVIGCEQLAPLEQNVQAAMNFTPIGESAKQRLQEKVAPSRSAWENFLRTHEDAATV
Ga0193743_11280632	3300019889	Soil	SFTPISESGKQKLQEKVAPSRSAWENFLRTHEDSIVV
Ga0193755_10642712	3300020004	Soil	LEQNVQATLNFTPMSEGGKQKLQEKVAPSRSAWENFLRSHEDSVTV
Ga0193753_102013062	3300020034	Soil	VQAALSFTPISESGKQKLQEKVAPSRSAWENFLRTHEDSIVV
Ga0193717_10153874	3300020060	Soil	NFTPISESGKQKLQEKIAPSRSAWENFLRGHEDSITV
Ga0210378_100642551	3300021073	Groundwater Sediment	AAMNFIPISENGKQKLQEKVAPSRSAWQKFLEMHDDSATV
Ga0222622_104071442	3300022756	Groundwater Sediment	SQPVASVIIGCEQLAPLEQNVQATLNFTPMSEGGKQKLKEKVAPSRSAWENFLRSHEDSVTV
Ga0209399_102771362	3300025157	Thermal Springs	RAALHFTPITEGAKHKLQEKVAPSRSAWQHFLQSHNDSPPV
Ga0209324_102259473	3300025174	Soil	EQMAPLEQNVQAALNFTPISESGKQELQEKVAPSRSAWQRFLQSHDDSVAA
Ga0209431_101185161	3300025313	Soil	HLEQNVQATLNFTPISESGKQKLQEKVAPSRSAWQRFLQSHGDSLPA
Ga0207705_110010322	3300025909	Corn Rhizosphere	MFCLSSVIIGCAQMALLGQNIQAALSFTPARESDKQRLREKIAPSRSAWENFLRTHEDGTVV
Ga0207644_116038552	3300025931	Switchgrass Rhizosphere	VIIGCEEMAPLEENVLAAASFTPMSENGKQRVKEKVAPSRAAWENFLRTHEDSAVV
Ga0210069_10592151	3300025958	Natural And Restored Wetlands	IGCEQFSPLEENIQAALNFKPISDGAKQRLQEKVAQSRSAWENFLRHHEDSATV
Ga0207668_104254771	3300025972	Switchgrass Rhizosphere	DGAARAKHQAALSYTPASESDTQRLREKIASSRSAWENFLRTHEDGTVV
Ga0208421_10144831	3300026058	Natural And Restored Wetlands	QPVASVVIGCEQLAPLEQNVQAAMNFRPISESGKQRLQEKVAPSRSAWENFLRTHEDSVA
Ga0207641_116684782	3300026088	Switchgrass Rhizosphere	IGCEEMAPLEENVLAAASFTPMSENGKQRVKEKVAPSRAAWENFLRTHEDSAVV
Ga0209874_10099473	3300027577	Groundwater Sand	VACVVIGCEQMAPLEQNIQAALNFTPMSESEKPKLQEKVAPSRSAWQRFLQSHDDSIAV
Ga0209387_10301672	3300027639	Agricultural Soil	EQNVQAAANFTPISESGKQKLQEKVAPSRSAWQKFL
Ga0209799_10924681	3300027654	Tropical Forest Soil	ARLEENVQAAMHFTPMSESGKQKLQERVAPSRSAWENFLRSHVDSLTV
Ga0209819_101249552	3300027722	Freshwater Sediment	PVACVVIGCEQMVRLEENVQAALNFTPINESGKQKLQEKVAPSRSAWQRFLQSHDDSVAI
Ga0209073_100740031	3300027765	Agricultural Soil	LGQNIQAVLSYTPASESDKQRLREKIAPSRSAWENFLRTHEDGTVV
Ga0209177_100863682	3300027775	Agricultural Soil	NLSQPVASVIIGCEQITPLEQNIQAALNFTPASDSRKQQLREKLAPARSAWENFLRTHEDGTVV
Ga0209074_103944941	3300027787	Agricultural Soil	PVASVIIGCEQMAALEQNIQAALNSTPMSESAKQQVREKVAPSRSAWENFLRTHEDSALV
Ga0209726_100954603	3300027815	Groundwater	MDPLEQNVQAALDFRPMSESGKQKLQEKVAPSWAAWENFLRTHEDSVAV
Ga0268266_123248842	3300028379	Switchgrass Rhizosphere	NLSQPVASVIIGCAQMALLGQNIQAALSFTPARESDKQRLREKIAPSRSAWENFLRTHEDGTVV
Ga0306921_113109112	3300031912	Soil	ALSFAPMSEPDKQKLQEKVAPSRSAWQRFLESHDDFVAV
Ga0214473_106809221	3300031949	Soil	ASVVIGCEQMARLEENVLAALNFTPISEIGKQKLQEKVAPSRSAWQNFLRNHDDSVAV
Ga0310895_107045262	3300032122	Soil	EQLAPLEQNVQAALNFTPISESSKQKLQEKVAPSRSAWENFLRSHEDSVTV
Ga0307471_1016253811	3300032180	Hardwood Forest Soil	VASVIIGCEQLAPLEQNVQAALNFTPISESSKQKLQEKVAPSRSAWENFLRSHEDSVTV
Ga0307471_1034254171	3300032180	Hardwood Forest Soil	PVACVVIGCEQMAPLEQNVQAAQSFVPMNENDKQKLQEKVAPSRSAWQQFLQSHDDSVAV
Ga0310812_102436711	3300032421	Soil	PVASVIIGCEQIAPLEQNIQAALNFTPASDSRKQRLREKLAPSRSAWENFLRTHEDGTVV
Ga0316604_105005691	3300033406	Soil	EQNVQAALNFTPLGETGKQKLQEQVAPSRSAWEKFLRAHEDSITV
Ga0316605_113959851	3300033408	Soil	LSQPVASVIIGCEQLSPLEENIRAALNFKPISDDAKQRLQEKVAPSRSAWEKFLRQHEDSITV
Ga0316620_106802092	3300033480	Soil	VACVVIGCEQMAPLEQNLQAAIKFTPLGENEKRKLQEKVVPSRSGWQQFLRSHADS
Ga0364935_0034775_1142_1291	3300034151	Sediment	MVRLEENVQAALNFTPISESGKQKLQEKVAPSRSAWQNFLRNHDDSVTV

Hidden Markov Model


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