Metagenome Family F058232

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F058232
Family Type	Metagenome
Number of Sequences	135
Average Sequence Length	93 residues
Representative Sequence	MTMWPSAAMIADYLEQRLPGKDGEIHVGFTSKQRDQVVAALRLREAAEPFIAFAKSGSFKLFGDDFVLTNGSRQAQRQLTAGDFRALLAAAGEEEA
Number of Associated Samples	107
Number of Associated Scaffolds	135

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	54.07 %
% of genes near scaffold ends (potentially truncated)	30.37 %
% of genes from short scaffolds (< 2000 bps)	89.63 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (56.296 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (15.556 % of family members)
Environment Ontology (ENVO)	Unclassified (57.037 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (70.370 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.21% β-sheet: 0.00% Coil/Unstructured: 44.79%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 135 Family Scaffolds
PF08867	FRG	2.22
PF00072	Response_reg	1.48
PF12833	HTH_18	1.48
PF00144	Beta-lactamase	0.74
PF00849	PseudoU_synth_2	0.74
PF07366	SnoaL	0.74
PF01527	HTH_Tnp_1	0.74
PF13450	NAD_binding_8	0.74
PF06411	HdeA	0.74
PF02586	SRAP	0.74
PF07750	GcrA	0.74
PF01757	Acyl_transf_3	0.74
PF01494	FAD_binding_3	0.74
PF07045	DUF1330	0.74
PF04392	ABC_sub_bind	0.74
PF05231	MASE1	0.74
PF01966	HD	0.74

COG ID	Name	Functional Category	% Frequency in 135 Family Scaffolds
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.48
COG0564	Pseudouridine synthase RluA, 23S rRNA- or tRNA-specific	Translation, ribosomal structure and biogenesis [J]	0.74
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.74
COG0642	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.74
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.74
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.74
COG1187	Pseudouridylate synthase RsuA, specific for 16S rRNA U516 and 23S rRNA U2605	Translation, ribosomal structure and biogenesis [J]	0.74
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.74
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.74
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.74
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.74
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.74
COG3447	Integral membrane sensor domain MASE1	Signal transduction mechanisms [T]	0.74
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.74
COG5352	Uncharacterized conserved protein	Function unknown [S]	0.74
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.30 %
All Organisms	root	All Organisms	43.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.30 %
cellular organisms	root	All Organisms → cellular organisms	43.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.30 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	43.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.30 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	40.74 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.30 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	31.85 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.30 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	24.44 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.30 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	16.30 %
Ahrensiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Ahrensiaceae	5.19 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.30 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	15.56 %
Ahrensia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Ahrensiaceae → Ahrensia	5.19 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.30 %
unclassified Ahrensia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Ahrensiaceae → Ahrensia → unclassified Ahrensia	5.19 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	2.96 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.74 %
Bradyrhizobium valentinum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium valentinum	0.74 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.74 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.30 %
Ahrensia sp. R2A130	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Ahrensiaceae → Ahrensia → unclassified Ahrensia → Ahrensia sp. R2A130	5.19 %
Bradyrhizobium sp. CCBAU 051011	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 051011	2.22 %
Bradyrhizobium sp. MOS001	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. MOS001	0.74 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.74 %
Bradyrhizobium valentinum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium valentinum	0.74 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.74 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.74 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352025\|deepsgr__Contig_88984	Not Available	821	Open in IMG/M
3300004081\|Ga0063454_101317949	Not Available	606	Open in IMG/M
3300004153\|Ga0063455_100068639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1313	Open in IMG/M
3300004156\|Ga0062589_101383733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	685	Open in IMG/M
3300004157\|Ga0062590_100739654	Not Available	893	Open in IMG/M
3300004157\|Ga0062590_102465453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Ahrensiaceae → Ahrensia → unclassified Ahrensia → Ahrensia sp. R2A130	550	Open in IMG/M
3300004479\|Ga0062595_101086060	Not Available	698	Open in IMG/M
3300005093\|Ga0062594_102451128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Ahrensiaceae → Ahrensia → unclassified Ahrensia → Ahrensia sp. R2A130	571	Open in IMG/M
3300005328\|Ga0070676_10413660	Not Available	941	Open in IMG/M
3300005329\|Ga0070683_101436226	Not Available	663	Open in IMG/M
3300005330\|Ga0070690_100276874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1196	Open in IMG/M
3300005331\|Ga0070670_100550237	Not Available	1029	Open in IMG/M
3300005334\|Ga0068869_100209659	All Organisms → cellular organisms → Bacteria → Proteobacteria	1540	Open in IMG/M
3300005337\|Ga0070682_100970854	Not Available	703	Open in IMG/M
3300005338\|Ga0068868_100214241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1611	Open in IMG/M
3300005338\|Ga0068868_102440674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Ahrensiaceae → Ahrensia → unclassified Ahrensia → Ahrensia sp. R2A130	500	Open in IMG/M
3300005339\|Ga0070660_101605064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Ahrensiaceae → Ahrensia → unclassified Ahrensia → Ahrensia sp. R2A130	554	Open in IMG/M
3300005343\|Ga0070687_100564965	Not Available	776	Open in IMG/M
3300005345\|Ga0070692_11060482	Not Available	570	Open in IMG/M
3300005354\|Ga0070675_100858699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	831	Open in IMG/M
3300005354\|Ga0070675_101378480	Not Available	650	Open in IMG/M
3300005356\|Ga0070674_100111944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2006	Open in IMG/M
3300005356\|Ga0070674_101859649	Not Available	547	Open in IMG/M
3300005364\|Ga0070673_100148286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. MOS001	1985	Open in IMG/M
3300005441\|Ga0070700_100290240	All Organisms → cellular organisms → Bacteria → Proteobacteria	1190	Open in IMG/M
3300005458\|Ga0070681_11589664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Ahrensiaceae → Ahrensia → unclassified Ahrensia → Ahrensia sp. R2A130	579	Open in IMG/M
3300005459\|Ga0068867_100160112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1775	Open in IMG/M
3300005459\|Ga0068867_101326908	Not Available	665	Open in IMG/M
3300005544\|Ga0070686_101436485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Ahrensiaceae → Ahrensia → unclassified Ahrensia → Ahrensia sp. R2A130	580	Open in IMG/M
3300005564\|Ga0070664_100138236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2143	Open in IMG/M
3300005577\|Ga0068857_102200580	Not Available	541	Open in IMG/M
3300005578\|Ga0068854_101180645	Not Available	685	Open in IMG/M
3300005719\|Ga0068861_101901719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Ahrensiaceae → Ahrensia → unclassified Ahrensia → Ahrensia sp. R2A130	592	Open in IMG/M
3300005843\|Ga0068860_101135254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	801	Open in IMG/M
3300005844\|Ga0068862_100145214	All Organisms → cellular organisms → Bacteria → Proteobacteria	2108	Open in IMG/M
3300006237\|Ga0097621_100773482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	888	Open in IMG/M
3300006881\|Ga0068865_100986826	Not Available	737	Open in IMG/M
3300009094\|Ga0111539_13519302	Not Available	502	Open in IMG/M
3300009098\|Ga0105245_10475178	Not Available	1262	Open in IMG/M
3300009098\|Ga0105245_10491535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1242	Open in IMG/M
3300009098\|Ga0105245_11023650	Not Available	871	Open in IMG/M
3300009101\|Ga0105247_10062049	All Organisms → cellular organisms → Bacteria → Proteobacteria	2318	Open in IMG/M
3300009148\|Ga0105243_10391411	All Organisms → cellular organisms → Bacteria → Proteobacteria	1288	Open in IMG/M
3300009148\|Ga0105243_12101025	Not Available	600	Open in IMG/M
3300009174\|Ga0105241_11193215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	720	Open in IMG/M
3300009177\|Ga0105248_10436639	All Organisms → cellular organisms → Bacteria → Proteobacteria	1475	Open in IMG/M
3300009177\|Ga0105248_10903510	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	997	Open in IMG/M
3300009177\|Ga0105248_12607074	Not Available	576	Open in IMG/M
3300009545\|Ga0105237_11174505	Not Available	774	Open in IMG/M
3300009551\|Ga0105238_12044296	Not Available	607	Open in IMG/M
3300009551\|Ga0105238_12839880	Not Available	521	Open in IMG/M
3300009789\|Ga0126307_10060235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2976	Open in IMG/M
3300010037\|Ga0126304_10058361	All Organisms → cellular organisms → Bacteria	2361	Open in IMG/M
3300010038\|Ga0126315_10346471	Not Available	925	Open in IMG/M
3300010373\|Ga0134128_11900933	Not Available	655	Open in IMG/M
3300010397\|Ga0134124_11639645	Not Available	674	Open in IMG/M
3300010400\|Ga0134122_12963051	Not Available	529	Open in IMG/M
3300011119\|Ga0105246_11065662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	736	Open in IMG/M
3300012212\|Ga0150985_118896286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1989	Open in IMG/M
3300012901\|Ga0157288_10350286	Not Available	535	Open in IMG/M
3300012922\|Ga0137394_11056309	Not Available	673	Open in IMG/M
3300012922\|Ga0137394_11365675	Not Available	570	Open in IMG/M
3300012929\|Ga0137404_10208132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	1660	Open in IMG/M
3300012984\|Ga0164309_10015774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3849	Open in IMG/M
3300012985\|Ga0164308_10692715	Not Available	878	Open in IMG/M
3300013104\|Ga0157370_11168073	Not Available	695	Open in IMG/M
3300013296\|Ga0157374_11826805	Not Available	633	Open in IMG/M
3300013297\|Ga0157378_11823380	Not Available	657	Open in IMG/M
3300013308\|Ga0157375_10403463	All Organisms → cellular organisms → Bacteria → Proteobacteria	1534	Open in IMG/M
3300014326\|Ga0157380_11625954	Not Available	702	Open in IMG/M
3300014326\|Ga0157380_12188112	Not Available	617	Open in IMG/M
3300014326\|Ga0157380_12235530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	611	Open in IMG/M
3300015200\|Ga0173480_10147423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1198	Open in IMG/M
3300017792\|Ga0163161_10297662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1270	Open in IMG/M
3300017965\|Ga0190266_10075637	Not Available	1297	Open in IMG/M
3300018067\|Ga0184611_1122917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 051011	911	Open in IMG/M
3300018072\|Ga0184635_10234923	Not Available	727	Open in IMG/M
3300018073\|Ga0184624_10281843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	745	Open in IMG/M
3300018073\|Ga0184624_10327835	Not Available	686	Open in IMG/M
3300018081\|Ga0184625_10044812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2204	Open in IMG/M
3300018081\|Ga0184625_10196445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 051011	1057	Open in IMG/M
3300018083\|Ga0184628_10437055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	682	Open in IMG/M
3300018469\|Ga0190270_10047085	Not Available	2964	Open in IMG/M
3300018469\|Ga0190270_10557080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1107	Open in IMG/M
3300018469\|Ga0190270_13106254	Not Available	525	Open in IMG/M
3300018476\|Ga0190274_10016108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4781	Open in IMG/M
3300018476\|Ga0190274_10210119	All Organisms → cellular organisms → Bacteria	1722	Open in IMG/M
3300018481\|Ga0190271_11260438	Not Available	860	Open in IMG/M
3300018481\|Ga0190271_11766048	Not Available	731	Open in IMG/M
3300019789\|Ga0137408_1220455	Not Available	815	Open in IMG/M
3300020579\|Ga0210407_10535917	Not Available	914	Open in IMG/M
3300021078\|Ga0210381_10100507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 051011	938	Open in IMG/M
3300021082\|Ga0210380_10213460	Not Available	873	Open in IMG/M
3300022756\|Ga0222622_10070771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2051	Open in IMG/M
3300025901\|Ga0207688_10398149	Not Available	854	Open in IMG/M
3300025903\|Ga0207680_10478668	Not Available	885	Open in IMG/M
3300025904\|Ga0207647_10621497	Not Available	594	Open in IMG/M
3300025914\|Ga0207671_11180436	Not Available	599	Open in IMG/M
3300025914\|Ga0207671_11575624	Not Available	506	Open in IMG/M
3300025919\|Ga0207657_10254470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1399	Open in IMG/M
3300025925\|Ga0207650_10646823	Not Available	891	Open in IMG/M
3300025926\|Ga0207659_10678966	Not Available	881	Open in IMG/M
3300025927\|Ga0207687_10414265	Not Available	1111	Open in IMG/M
3300025927\|Ga0207687_10504377	Not Available	1010	Open in IMG/M
3300025935\|Ga0207709_10424646	All Organisms → cellular organisms → Bacteria → Proteobacteria	1022	Open in IMG/M
3300025941\|Ga0207711_10313273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium valentinum	1449	Open in IMG/M
3300025941\|Ga0207711_10705319	Not Available	941	Open in IMG/M
3300025942\|Ga0207689_10173623	All Organisms → cellular organisms → Bacteria → Proteobacteria	1777	Open in IMG/M
3300025942\|Ga0207689_10927606	Not Available	735	Open in IMG/M
3300025945\|Ga0207679_10295023	Not Available	1395	Open in IMG/M
3300025961\|Ga0207712_10271200	All Organisms → cellular organisms → Bacteria → Proteobacteria	1380	Open in IMG/M
3300025972\|Ga0207668_10762352	Not Available	854	Open in IMG/M
3300025972\|Ga0207668_11332742	Not Available	646	Open in IMG/M
3300026023\|Ga0207677_10337826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1257	Open in IMG/M
3300026023\|Ga0207677_10808977	Not Available	839	Open in IMG/M
3300026035\|Ga0207703_12175935	Not Available	531	Open in IMG/M
3300026067\|Ga0207678_10134993	All Organisms → cellular organisms → Bacteria → Proteobacteria	2105	Open in IMG/M
3300026118\|Ga0207675_101708978	Not Available	649	Open in IMG/M
3300026557\|Ga0179587_10506588	Not Available	792	Open in IMG/M
3300027903\|Ga0209488_10316969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1163	Open in IMG/M
3300028379\|Ga0268266_10007577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9774	Open in IMG/M
3300028380\|Ga0268265_12351143	Not Available	539	Open in IMG/M
3300028381\|Ga0268264_11985624	Not Available	591	Open in IMG/M
3300028710\|Ga0307322_10203785	Not Available	540	Open in IMG/M
3300028719\|Ga0307301_10066534	Not Available	1121	Open in IMG/M
3300028755\|Ga0307316_10284401	Not Available	604	Open in IMG/M
3300028786\|Ga0307517_10645246	Not Available	516	Open in IMG/M
3300028875\|Ga0307289_10236698	Not Available	751	Open in IMG/M
3300028876\|Ga0307286_10156536	Not Available	818	Open in IMG/M
3300028876\|Ga0307286_10299447	Not Available	594	Open in IMG/M
3300031170\|Ga0307498_10009341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1915	Open in IMG/M
3300031170\|Ga0307498_10012333	All Organisms → cellular organisms → Bacteria	1752	Open in IMG/M
3300031198\|Ga0307500_10015079	Not Available	1614	Open in IMG/M
3300031616\|Ga0307508_10424120	Not Available	922	Open in IMG/M
3300033180\|Ga0307510_10003888	All Organisms → cellular organisms → Bacteria → Proteobacteria	17506	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	55.56%
Environmental	Environmental	44.44%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	55.56%
Terrestrial	Environmental → Terrestrial	37.04%
Aquatic	Environmental → Aquatic	7.41%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	37.04%
Rhizosphere	Host-Associated → Plants → Rhizosphere	35.56%
Rhizoplane	Host-Associated → Plants → Rhizoplane	17.04%
Sediment	Environmental → Aquatic → Sediment	5.93%
Roots	Host-Associated → Plants → Roots	2.96%
Freshwater	Environmental → Aquatic → Freshwater	1.48%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	29.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	22.22%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	16.30%
Soil	Host-Associated → Plants → Rhizosphere → Soil	13.33%
Loam	Environmental → Terrestrial → Soil → Loam	7.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.93%
Unclassified	Host-Associated → Plants → Roots → Unclassified	2.22%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.74%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	22.22%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	16.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	13.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.93%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.70%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	2.22%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.48%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.48%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.74%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	7.41%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	6.67%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.19%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.19%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	5.19%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.19%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.44%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.44%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.70%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.22%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.22%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.22%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.22%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.22%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	2.22%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.22%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.22%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.48%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.48%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.74%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.74%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.74%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028786	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM	Host-Associated	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031616	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM	Host-Associated	Open in IMG/M
3300033180	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM	Host-Associated	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deepsgr_01316290	2199352025	Soil	VAIRGVIADYLEQLLPGKDGEIHVGFTSKQRDQVVAALRLREAAEPFIAFAKSGSFKLFGDDFVLTNGARQAHRQLTASDFRALLAAVGEKEA
Ga0063454_1013179491	3300004081	Soil	LRQHMPTVPKKGQSAMTMLPSAAVIADYLEERMPDKDGEIRVGFTSKQRDQIVAALRQCEAVEPFIVFAKAGTFKQFGDDFVLTNGSRQAQRQLTAGDFRALLAAAGEEEA*
Ga0063455_1000686391	3300004153	Soil	MTMWPTAAMMADYLEERIPDKDGEIHVGFTSQQRDEVVAALRLREAAEPFIAFAKSGNFKLFGDGFVLTNGSRQAHRQLTAGDFRVLLAAVGEEEA*
Ga0062589_1013837331	3300004156	Soil	PGKDGEIHVGFTSKQRDQVVAALRLREAAEPFIAFAKSGSFKLFGDDFVLTNGSRQDHRQLTAGNFRALLAAVGE*
Ga0062590_1007396542	3300004157	Soil	MTMWPSATMIADYLEERKPGKDGEIHVGFTSKQRDEIVAALRLRAAVQPFIAYAKGGSFKLFGDGFVLTNGSREVQHQLTAGDFRALLAAAGEEDA*
Ga0062590_1024654531	3300004157	Soil	MIADYLEQRLPGKDGEIHVGFTSKQRDQVVAALRLREAAEPFIAFAKSGSFKLFGDDFVLTNGQRQAQRQLTAGDFRALLASVGEDEC*
Ga0062595_1010860602	3300004479	Soil	MIADYLEERIPGKDGEIHVGFTSKQRDEIVAALRLRAAVQPFIDYAKGGGFKLFGDGFVLTNGSREVQHQLTAGDFRALLAAAGEEEA*
Ga0062594_1024511281	3300005093	Soil	MTMWPSAAMIADYLEQRLPGKDGEIHVGFTSKQRDQVVAALRLREAAEPFIAFAKSGSFKLFGDDFVLTNGQRQAQRQLTAGDFRALLASVGEDECENLRRD*
Ga0070676_104136602	3300005328	Miscanthus Rhizosphere	MTMLPSATMIADYLEERIPDKDGEIRVGFTSKERDQIVAALRQREAMEPFIAFAKAGTFKLFGDGFVLTNGSREAQRQLTAGDFRALLAAAGEEEA*
Ga0070683_1014362262	3300005329	Corn Rhizosphere	MTMWPSAAMIADYLEQRLPGKDGEIHVGFTSKQRDQVVAALRLREAAEPFIAFAKSGSFKLFGDDFVLTNGQRQAQHRLTAGDFRALLASVGEDECENLRRD*
Ga0070690_1002768742	3300005330	Switchgrass Rhizosphere	MTMWPSATMIADYLEERKPGKDGEIHVGFTSKQRDEIVAALRLRAAVQPFIDYAKGGGFKLFGDGFVLTNGSREVQHQLTAGDFRALLAAAGEEEA*
Ga0070670_1005502373	3300005331	Switchgrass Rhizosphere	MTMWPSATMIADYLEERIPGKDGEIHVGFTSKQRDEIVAALRLRAAVQPFIDYAKGGGFKLFGDGFVLTNGSREVQHQLTAGDFRALLAAAGEEEA*
Ga0068869_1002096594	3300005334	Miscanthus Rhizosphere	MTMWPSATMIADYLEERIPGKDGEIHVGFTSKQRDEIVAALRLRAAVQPFIAYAKGGSFKLFGDGFVLTNGSREVQHQLTAGDFRALLAAAGEEEA*
Ga0070682_1009708541	3300005337	Corn Rhizosphere	MTMWPSATMIADYLEERKPGKDGEIHVGFTSKQRDEIVAALRLRAAVQPFIAYAKGGSFKLFGDGFVLTNGSREVQHQLTAG
Ga0068868_1002142411	3300005338	Miscanthus Rhizosphere	MIADYLEERIPGKDGEIHVGFTSKQRDEIVAALRLRAAVQPFIAYAKGGSFKLFGDGFVLTNGSREVQHQLTAGDFRALLAAAGEEDA*
Ga0068868_1024406741	3300005338	Miscanthus Rhizosphere	PSATMIADYLEERIPDKDGEIRVGFTSKERDQIVAALRQREAMEPFIAFAKAGTFKLFGDGFVLTNGSREAQRQLTAGDFRALLAAAGEEEA*
Ga0070660_1016050641	3300005339	Corn Rhizosphere	HMPTVPKQGQSAMTMLPSATMIADYLEERIPDKDGEIRVGFTSKERDQIVAALRQREAMEPFIAFAKAGTFKLFGDGFVLTNGSREAQRQLTAGDFRALLAAAGEEEA*
Ga0070687_1005649653	3300005343	Switchgrass Rhizosphere	MIADYLEERIPGKDGEIHVGFTSKQRDEIVAALRLRAAVQPFIAYAKGGSFKLFGDAFVLTNGSREVQHQLTAGDFRALLAAAGEEEA*
Ga0070692_110604822	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MPTVPKQGQSAMTMLPSATMIADYLEERIPDKDGEIRVGFTSKERDQIVAALRQREAMEPFIAFAKAGTFKLFGDGFVLTNGSREAQRQLTAGDFRALLAAAGEEEA*
Ga0070675_1008586991	3300005354	Miscanthus Rhizosphere	MTMWPSAAMIADYLEQRLPGKDGEIHVGFTSKQRDQVVAALRLREAAEPFIAFAKSGSFKLFGDDFVLTNGQRQAQRQLTAGDFRALLASVGEDECENLHRD*
Ga0070675_1013784802	3300005354	Miscanthus Rhizosphere	YLEERIPGKDGEIHVGFTSKQRDEIVAALRLRAAVQPFIAYAKGGSFKLFGDGFVLTNGSREVQHQLTAGDFRALLAAAGEEDA*
Ga0070674_1001119445	3300005356	Miscanthus Rhizosphere	MIADYLEERIPDKDGEIRVGFTSKERDQIVAALRQREAMEPFIAFAKAGTFKLFGDGFVLTNGSREAQRQLTAGDFRALLAAAGEEEA*
Ga0070674_1018596492	3300005356	Miscanthus Rhizosphere	MTMWPTAAMIADYLEQRLPGKDGEIHVGFTSKQRDQVVAALRLREAAEPFIAFAKSGSFKLFGDDFVLTNGARQAHRQLTASDFRALLAAVGEKEA*
Ga0070673_1001482865	3300005364	Switchgrass Rhizosphere	EIHVGFTSKQRDEIVAALRLRAAVQPFIDYAKGGGFKLFGDGFVLTNGSREVQHQLTAGDFRALLAAAGEEEA*
Ga0070700_1002902401	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MIADYLEERIPGKDGEIHVGFTSKQRDEIVAALRLRAAVQPFIAYAKGGSFKLFGDGFVLTNGSREVQHQLTAGDFRALLAAAGEEEA*
Ga0070681_115896641	3300005458	Corn Rhizosphere	MTMWPSAALIADYLEQLLPGKDGEIHVGFTSKQRDQVVAALRLREAAEPFIAFAKSGSFKLFGDDFVLTNGARQAHRQLTASDFRALLAAVGEKEA*
Ga0068867_1001601123	3300005459	Miscanthus Rhizosphere	MIADYLEERIPDKDGEIRVGFTSKERDQIVAALRQREAMEPFIAFAKAGTFKLFGDGFVLTNGSREAQRQLTAGDFRALLA
Ga0068867_1013269081	3300005459	Miscanthus Rhizosphere	MTMWPSATMIADYLEERIPGKDGEIHVGFTSKQRDEIVAALRLRAAVQPFIDYAKGGGFKLFGDGFVLTNGSREVQHQLTAGDFRALLAAAGEEE
Ga0070686_1014364851	3300005544	Switchgrass Rhizosphere	DYLEERIPDKDGEIRVGFTSKERDQIVAALRQREAMEPFIAFAKAGTFKLFGDGFVLTNGSREAQRQLTAGDFRALLAAAGEEEA*
Ga0070664_1001382362	3300005564	Corn Rhizosphere	MTMWPSAAMIADYLEQRLPGKDGEIHVGFTSKQRDQVVAALRLREAAEPFIAFAKSGGFKLFGDDFVLTNGQRQAQHRLTAGDFRALLASVGEDECENLRRD*
Ga0068857_1022005801	3300005577	Corn Rhizosphere	MTMWPSATMIADYLEERIPGKDGEIHVGFTSKQRDEIVAALRLRAAVQPFIDYAKGGGFKLFGDGFVLTNGSREVQHQLTAGDFRKLAAAGEEEA*
Ga0068854_1011806452	3300005578	Corn Rhizosphere	MTMWPSAAMIADYLEQRLPGKDGEIHVGFTSKQRDQVVAALRLREAAEPFIAFAKSGSFKLFGDDFVLTNGQRQAQHRLTAGDFRALLAAAGEEEA*
Ga0068861_1019017191	3300005719	Switchgrass Rhizosphere	MWPAAAMIADYLEQRLPGKDGEIHVGFTSKQRDQVVAALRLREAAEPFIAFAKSGSFKLFGDDFVLTNGSRQAQRQLTAGDFRALLAAAGEEEA*
Ga0068860_1011352543	3300005843	Switchgrass Rhizosphere	AMIADYLEQRLPGKDGEIHVGFTSKQRDQVVAALRLREAAEPFIAFAKSGSFKLFGDDFVLTNGPRQAHRQLTARDFRALLAAVGEKEA*
Ga0068862_1001452141	3300005844	Switchgrass Rhizosphere	MTMWPSATMIADYLEERIPGKDGEIHVGFTSKQRDEIVAALRLRAAVQPFIAYAKGGSFKLFGDGFVLTNGSREVQHQLTAGDFRALLAAAGEEDA*
Ga0097621_1007734821	3300006237	Miscanthus Rhizosphere	MIADYLEQRLPGKDGEIHVGFTSKQRDQVVAALRLREAAEPFIAFAKSGSFKLFGDDFVLTNGSRQDHRQLTAGNFRALLAAVGE*
Ga0068865_1009868261	3300006881	Miscanthus Rhizosphere	PSATMIADYLEERIPGKDGEIHVGFTSKQRDEIVAALRLRAAVQPFIDYAKGGGFKLFGDGFVLTNGSREVQHQLTAGDFRALLAAAGEEEA*
Ga0111539_135193021	3300009094	Populus Rhizosphere	DGEIHVGFTSKQRDEIVAALRLRAAVQPFIDYAKGGGFKLFGDGFVLTNGSREVQHQLTAGDFRALLAAAGEEEA*
Ga0105245_104751783	3300009098	Miscanthus Rhizosphere	MIADYLEQRLPGKDGEIHVGFTSKQRDQVVAALRLREAAEPFIAFAKSGSFKLFGDDFVLTNGQRQAQRQLTAGDFRALLASVGEDECENLRRD*
Ga0105245_104915351	3300009098	Miscanthus Rhizosphere	MPTVPKQGQSAMTMLPSATMIADYLEERIPDKDGEIRVGFTSKERDQIVAALRQREAMEPFIAFAKAGTFKLFGDGFVLTNGSREVQHQ
Ga0105245_110236502	3300009098	Miscanthus Rhizosphere	MWPSATMIADYLEERVPDKDGEIHVGFTSKQRDEVVAALRLRAAVQPFIAYAKGGSFKLFGDGFVLTNGSREVQHQLTAGDFRALLAAAGEEEA*
Ga0105247_100620493	3300009101	Switchgrass Rhizosphere	MWPSATMIADYLEERIPGKDGEIHVGFTSKQRDEIVAALRLRAAVQPFIDYAKGGGFKLFGDGFVLTNGSREVQHQLTAGDFRALLAAAGEEEA*
Ga0105243_103914112	3300009148	Miscanthus Rhizosphere	MWPSATMIADYLEERIPGKDGEIHVGFTSKQRDEIVAALRLRAAVQPFIAYAKGGSFKLFGDGFVLTNGSREVQHQLTAGDFRALLAAAGEEEA*
Ga0105243_121010252	3300009148	Miscanthus Rhizosphere	MWPTAAMIADYLEQRLPGKDGEIHVGFTSKQRDQVVAALRLREAAEPFIAFAKSGSFKLFGDDFVLTNGQRQAQHRLTAGDFRALLASVGEDECENLRRD*
Ga0105241_111932151	3300009174	Corn Rhizosphere	MIADYLEQRLPGKDGEIHVGFTSKQRDQVVAALRLREAAEPFIAFAKSGGFKLFGDDFVLTNGQRQAQHRLTAGDFRALLASVGEDECENLRRD*
Ga0105248_104366393	3300009177	Switchgrass Rhizosphere	MWPSATMIADYLEERKPGKDGEIHVGFTSKQRDEIVAALRLRAAVQPFIDYAKGGGFKLFGDGFVLTNGSREVQHQLTAGDFRALLAAAGEEEA*
Ga0105248_109035103	3300009177	Switchgrass Rhizosphere	MIADYLEQRLPGKDGEIHVGFTSKQRDQVVAALRLREAAEPFIAFAKSGSFKLFGDDFVLTNGQRQAQRQLTAGDFRALLASVGEDECDNLRRD*
Ga0105248_126070741	3300009177	Switchgrass Rhizosphere	EIHVGFTSKQRDEIVAALRLRAAVQPFIAYAKGGSFKLFGDGFVLTNGSREVQHQLTAGDFRALLAAAGEEDA*
Ga0105237_111745051	3300009545	Corn Rhizosphere	MWPSAAMIADYLEQRLPGKDGEIHVGFTSKQRDQVVAALRLREAAEPFIAFAKSGSFKLFGDDFVLTNGQRQAQRQLTAGDFRALLASVGEDECENLRRD*
Ga0105238_120442961	3300009551	Corn Rhizosphere	MPTVPKQGQSAMTMLPSATMIADYLEERIPDKDGEIRVGFTSKERDQIVAALRQREAMEPFIAFAKAGTFKLFGDGFVLTNGSREVQHQLTAGDFRALLAAAGEEEA*
Ga0105238_128398801	3300009551	Corn Rhizosphere	GASPMTMWPPATMIADYLEERKPGKDGEIHVGFTSKQRDEIVAALRLRAAVQPFIDYAKGGGFKLFGDGFVLTNGSREVQHQLTAGDFRALLAAAGEEEA*
Ga0126307_100602352	3300009789	Serpentine Soil	MWPTAAMIADYLEQRLPGKDGEIHVGFTSKQRDQVVAALRLREAAEPFIAFAMSGSFKLFGDDFVLTNGPRQAHRQLTARDFRALLAAVGEKEA*
Ga0126304_100583611	3300010037	Serpentine Soil	MWPTAAMIADYLEQRLPGKDGEIHVGFTSKQRDQVVAALRLREAAEPFIAFAMSGSFKLFGDDFVLTNGPRQAHRQLTARDFRALQPLFEI
Ga0126315_103464712	3300010038	Serpentine Soil	MPDKDGKIRVGFTSKQRDQIVAALRQREAVEPFIAFAKAGTFKLFSDDFVLTNGSRQAQRQLTAGDFRALLAAAGEEEA*
Ga0134128_119009331	3300010373	Terrestrial Soil	MWPSAAMIADYLEGRMLDKDGEVHLRFNSKQRVQLVAALQLREAAEPFIAFAKSGSFKLFGDDFVLTNGSRQAQRQLTAGDFRALLAAAGEEEA*
Ga0134124_116396451	3300010397	Terrestrial Soil	TMIADYLEERIPGKDGEIHVGFTSKQRDEIVAALRLRAAVQPFIAYAKGGSFKLFGDGFVLTNGSREVQHQLTAGDFRALLAAAGEEEA*
Ga0134122_129630511	3300010400	Terrestrial Soil	ERIPGKDGEIHVGFTSKKRDEIVAALRLRAAVQPFIDYAKGGGFKLFGDGFVLTNGSREVQHQLTAGDFRALLAAAGEEEA*
Ga0105246_110656622	3300011119	Miscanthus Rhizosphere	MWPSAAMIADYLEGRMPDKDGEIHARFNSKQRDQLVAALRLREAVEPFIAFAKSGSFKLFGNDFVLTNGSRQAQRQLTAGDFRALLAAAGEKEA*
Ga0150985_1188962863	3300012212	Avena Fatua Rhizosphere	MWPTAAMMADYLEERIPDKDGEIHVGFTSQQRDEVVAALRLREAAEPFIAFAKSGNFKLFGDGFVLTNGSRQAHRQLTAGDFRVLLAAVGEEEA*
Ga0157288_103502861	3300012901	Soil	MIADYLEERVPDKDGEIHVGFTSKQRDEVVAALRLRAAVQPFIAYAKGGSFKLFGDGFVLTNGSREVQHQLTAGDFRALLAAAGEEDA*
Ga0137394_110563091	3300012922	Vadose Zone Soil	SAAVIADYLEERMPDKDGEIRVGFTSKQRDQIVAALRQREAVEPFIAFAKAGTFKLFGDDFVLTNGSRQAQRQLTAGDFRALLAAAGEEEA*
Ga0137394_113656751	3300012922	Vadose Zone Soil	SAAVIADYLEERMPDKDGEIRVGFTSKQRDQIVAALRQREALEPFIAFAKAGTFKLFGDDFVLTNGSRQAQRQLTAGDFRALLAAAGEEEA*
Ga0137404_102081322	3300012929	Vadose Zone Soil	MWPSAAMIADYLEERQSDKDGEIHVAFTSKRRDQVVAALRLREAAEPFITFAKSGSFKLFGDDFVLTNGSRQAHRQLTAGDFRALLAAAGEEEA*
Ga0164309_100157745	3300012984	Soil	EWLPDTDRDHMAFTSKQRDQIVAALRLREAAEPFITFAKSGSFKLFGDDFVLTNGSRLAHRQLTAGDFRALLAAAGEEEA*
Ga0164308_106927152	3300012985	Soil	MIADYLEQRLPGKDGEIHVGFTSKQRDQVVAALRLREAAEPFIAFAKSGSFKLFGDDFVLTNGQRQAQHRLTAGDFRALLASVGEDECENLRRD*
Ga0157370_111680733	3300013104	Corn Rhizosphere	MIADYLEQRLPGKDGEIHVGFTSKQRDQVVAALRLREAAEPFIAFAKSGSFKLFGDDFVLTNGQRQAQHRLTAGDFRALLASVGEDECENL
Ga0157374_118268051	3300013296	Miscanthus Rhizosphere	MWPSATMIADYLEERKPGKDGEIHVGFTSKQRDEIVAALRLRAAVQPFIAYAKGGSFKLFGDGFVLTNGSREVQHQLTAGDFRALLAAAGEEDA*
Ga0157378_118233801	3300013297	Miscanthus Rhizosphere	MLPSATMIADYLEERIPDKDGEIRVGFTSKERDQIVAALRQREAMEPFIAFAKAGTFKLFGDGFVLTNGSREAQRQLTAGDFRALLAAAGEEEA*
Ga0157375_104034632	3300013308	Miscanthus Rhizosphere	MWPSATMIADYLEERKPGKDGEIHVGFTSKQRDEIVAALRLRAAVQPFIAYAKGGSFKLFGDGFVLTNGSREVQHQLTAGDFRALLAAAGEEEA*
Ga0157380_116259541	3300014326	Switchgrass Rhizosphere	PGKDGEIHVGFTSKQRDEIVAALRLRAAVQPFIDYAKGGGFKLFGDGFVLTNGSREVQHQLTAGDFRALLAAAGEEEA*
Ga0157380_121881122	3300014326	Switchgrass Rhizosphere	MWPSAAMIADYLEGRMLDKDGEVHLRFNSKQRDQLVAALRLREAAEPFIAFAKSGSFKLFGDDFVLTNGSRQAQRQLTAGDFRALLAAAGEEEA*
Ga0157380_122355301	3300014326	Switchgrass Rhizosphere	MIADYLEQRLPGKDGEIHVGFTSKQRDEVVAALRLREAAEPFLAFAKSGSFKLFGDDFVLTNGSRQDHRQLTAGNFRALLAAVGE*
Ga0173480_101474232	3300015200	Soil	MWPSAAMIADYLEQRLPGKDGEIHVGFTSKQRDEIVAALRLRAAVQPFIAYAKGGSFKLFGDGFVLTNGSREVQHQLTAGDFRALLAAAGEEEA*
Ga0163161_102976622	3300017792	Switchgrass Rhizosphere	MTMWPSATMIADYLEERIPGKDGEIHVGFTSKQRDEIVAALRLRAAVQPFIDYAKGGGFKLFGDGFVLTNGSREVQHQLTAGDFRALLAAAGEEDA
Ga0190266_100756372	3300017965	Soil	MIADYLEERKPGKDGEIHVGFTSKQRDEIVAALRLRAAVQPFIAYAKGGSFKLFGDGFVLTNGSREVQHQLTAGDFRALLAAAGEEEA
Ga0184611_11229171	3300018067	Groundwater Sediment	MTMWPTAAMIADYLEQRLPGKDGEIHVGFTSKQRDQVVAALRLREAAEPFITFAKSGNFKLFGDDFVLTNGSRQAHRQLTASDFRALLAAVGEKEA
Ga0184635_102349231	3300018072	Groundwater Sediment	MTMLPSGAVIADYLEERIPDKDGEIRVGFTSKQRDQIVAALRLHEAVQPFIAFAKSGSFKLFGDGFVLTNGSQTQRQLTAGDFRALLAAAGEKEA
Ga0184624_102818431	3300018073	Groundwater Sediment	HMPTVPKQRQSAMTMLPSGAVIADYLEERMPDKDGEIRLGFTSKQRDQIVAALRLHEAVQPFIAFAKSGSFKLFGDGFVLTNGSQTQRQLTAGDFRALLAAAGEKEA
Ga0184624_103278351	3300018073	Groundwater Sediment	MTMWPSAAMIANYLEERLSDKDGEIHVAFTSKQRDQVVAALRLREAAEPFITFAKSGNFKLFGDDFVLTNGSRQAHRQLTAGDFRALLAAAGEEEA
Ga0184625_100448122	3300018081	Groundwater Sediment	MTMLPGAVIADYLEERMPDKDGEIRLGFTSKQRDQIVAALRLHEAVQPFIAFAKSGSFKLFGDGFVLTNGSQTQRQLTAGDFRALLAAAGEKEA
Ga0184625_101964451	3300018081	Groundwater Sediment	MWPTAAMIADYLEQRLPGKDGEIHVGFTSRQRDQVVAALRLREAAEPFIAFAKSGSFKLFGDDFVLTNGARQAHRQLTASDFRALLAAVGEKEA
Ga0184628_104370552	3300018083	Groundwater Sediment	MTMLPSGAVIADYLEERMPDKDGEIRLGFTSKQRDQIVAALRLHEAVQPFIAFAKSGSFKLFGDGFVLTNGSQTQRQLTAGDFRALLAAAGEKEA
Ga0190270_100470852	3300018469	Soil	MTMWPSAAMIADYLEERLSDKDGEIHVAFTSKQRDQVVAALRLREAAEPFITFAKSGNFKLFGDDFVLTNGSRQAHRQLTAGDFRALLAAAGEEEA
Ga0190270_105570801	3300018469	Soil	MTMLPSGAVIADYLEERMPDKDGEIRLGFTSKQRDQIVAALRLLEAVQPFIAFAKSGSFKLFGDGFVLTNGSQTQRQLTAGDFRALLAAAGEKEV
Ga0190270_131062541	3300018469	Soil	MTMWPSARMIADYLEERIPGKDGEIHVGFTSKQRDDIVAALRLRAAVQPFIAYAKGGSFKLFGDGFVLTNGSREVQHQLTAGDFRALLAAAGEEDA
Ga0190274_100161085	3300018476	Soil	MTMWPSATMIADYLEERKPGKDGEIHVGFTSKQRDEIVAALRLRAAVQPFIAYAKGGSFKLFGDGFVLTNGSREVQHQLTAGDFRALLAAAGEEEA
Ga0190274_102101192	3300018476	Soil	MTMWPTAAMIADYLEQRLPGKDGEIHVGFTSKQRDQVVAALRLREAAEPFIAFAKSGSFKLFGDDFVLTNGARQAHRQLTASDFRALLAAVGEKEA
Ga0190271_112604381	3300018481	Soil	MTMWPSAAMIADYLEERLSDKDGEIHVAFTSKQRDQVVAALRLREAAEPFITFAKSGNFKLFGDDFVLTSGSRQAHRQLTAGDFRALLAAA
Ga0190271_117660481	3300018481	Soil	MTMWPSATMIADYLEERIPGKDGEIHVGFTSKQRDDIVTALRLRAAVQPFIAYAKGGSFKLFGDGFVLTNGSREVRHQLTAGDFRALLAAAGEEEA
Ga0137408_12204551	3300019789	Vadose Zone Soil	MTMWPSAAMIADYLEERQSDKDGEIHVAFTSKRRDQVVAALRLREAAEPFITFAKSGSFKLFGDDFVLTNGSRQAHRQLTAGDFRALLAAAGEEEA
Ga0210407_105359171	3300020579	Soil	MMTMWPTAAMIAHYLEQRTPDQHGDIHIGITSKQRDQLVAALRLRDAVEPFLSFAKSGAFKLFGDDFVLTNGSPLAHRQLTAGDFRALLTAAAEEEA
Ga0210381_101005072	3300021078	Groundwater Sediment	MTMWPTAAMIADYLEQRLPGKDGEIHVGFTSRQRDQVVAALRLREAAEPFIAFAKSGSFKLFGDDFVLTNGPRQAHRQLTASDFRALLAAVGEKEA
Ga0210380_102134601	3300021082	Groundwater Sediment	MTMLPSGAVIADYLEERMPDKDGEIRLGFTSKQRDQIVAALRLHEAVQPFIAFAKSGSFKLFGDGFVLTNGSQTQRQLTAGDFRALLAAAGE
Ga0222622_100707714	3300022756	Groundwater Sediment	MTMWPSAALIADYLEQLLPGKDGEIHVDFTSKQRDQVVAALRLREAAEPFIAFAKSGSFKLFGDDFVLTNGARQAHRQLTASDFRALLAAVGEKEA
Ga0207688_103981492	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MTMWPSAAMIADYLEQRLPGKDGEIHVGFTSKKRDQVVAALRLREAAEPFIAFAKSGSFKLFGDDFVLTNGQRQAQRQLTAGDFRALLASVGEDECENLRRD
Ga0207680_104786682	3300025903	Switchgrass Rhizosphere	MTMWPSATMIADYLEERKPGKDGEIHVGFTSKQRDEIVAALRLRAAVQPFIDYAKGGGFKLFGDGFVLTNGSREVQHQLTAGDFRALLAAAGEEEA
Ga0207647_106214971	3300025904	Corn Rhizosphere	MTMLPSATMIADYLEERIPDKDGEIRVGFTSKERDQIVAALRQREAMEPFIAFAKAGTFKLFGDGFVLTNGSREAQRQLTAGDFRALLAAAGEEEA
Ga0207671_111804361	3300025914	Corn Rhizosphere	MPSATMIADYLEERIPGKDGEIHVGFTSKQRDEIVAALRLRAAVQPFIAYAKGGSFKLFGDGFVLTNGSREAQRQLTAGDFRALLAAAGEEEA
Ga0207671_115756242	3300025914	Corn Rhizosphere	MTMWPSAAMIADYLEQRLPGKDGEIHVGFTSKQRDQVVAALRLREAAEPFIAFAKSGSFKLFGDDFVLTNGQRQAQRQLTAGDFRALLASV
Ga0207657_102544703	3300025919	Corn Rhizosphere	MIADYLEERIPDKDGEIRVGFTSKERDQIVAALRQREAMEPFIAFAKAGTFKLFGDGFVLTNGSREAQRQLTAGDFRALLAAAGEEEA
Ga0207650_106468232	3300025925	Switchgrass Rhizosphere	MIADYLEERIPGKDGEIHVGFTSKQRDEIVAALRLRAAVQPFIDYAKGGGFKLFGDGFVLTNGSREVQHQLTAGDFRALLAAAGEEEA
Ga0207659_106789662	3300025926	Miscanthus Rhizosphere	MTMWPSAAMIADYLEQRLPGKDGEIHVGFTSKQRDQVVAALRLREAAEPFIAFAKSGSFKLFGDDFVLTNGQRQAQRQLTAGDFRALLASVGEDECENLHRD
Ga0207687_104142651	3300025927	Miscanthus Rhizosphere	MIADYLEERVPDKDGEIHVGFTSKQRDEVVAALRLRAAVQPFIAYAKGGSFKLFGDGFVLTNGSREVQHQLTAGDFRALLAAAGEEEA
Ga0207687_105043771	3300025927	Miscanthus Rhizosphere	MTMWPSAAMIADYLEQRLPGKDGEIHVGFTSKQRDQVVAALRLREAAEPFIAFAKSGSFKLFGDDFVLTNGQRQAQRQLTAGDFRALLASVGEDECENLRRD
Ga0207709_104246461	3300025935	Miscanthus Rhizosphere	MTMWPSATMIADYLEERIPGKDGEIHVGFTSKQRDEIVAALRLRAAVQPFIAYAKGGSFKLFGDGFVLTNGSREAQRQLTAGDFRALLAAAGEEEA
Ga0207711_103132733	3300025941	Switchgrass Rhizosphere	MTMWPSAAMIADYLEQRLPGKDGEIHVGFTSKQRDQVVAALRLREAAEPFIAFAKSGSFKLFGDDFVLTNGQRQAQHRLTAGDFRALLASVGEDEC
Ga0207711_107053191	3300025941	Switchgrass Rhizosphere	MTMWPSATMIADYLEERKPGKDGEIHVGFTSKQRDEIVAALRLRAAVQPFIAYAKGGSFKLFGDGFVLTNGSREVQHQLTAGDFRALLAAAGEEDA
Ga0207689_101736233	3300025942	Miscanthus Rhizosphere	MTMWPSATMIADYLEERIPGKDGEIHVGFTSKQRDEIVAALRLRAAVQPFIAYAKGGSFKLFGDGFVLTNGSREVQHQLTAGDFRALLAAAGEEEA
Ga0207689_109276062	3300025942	Miscanthus Rhizosphere	MTMWPSAAMIADYLEQRLPGKDGEIHVGFTSKQRDQVVAALRLREAAEPFIAFAKSGSFKLFGDDFVLTNGSRQAQRQLTAGDFRALLAAAGEEEA
Ga0207679_102950233	3300025945	Corn Rhizosphere	MTMWPSAAMIADYLEQRLPGKDGEIHVGFTSKQRDQVVAALRLREAAEPFIAFAKSGSFKLFGDDFVLTNGQRQAQHRLTAGDFRALLASVGEDECENLRRD
Ga0207712_102712001	3300025961	Switchgrass Rhizosphere	MTMWPSATMIADYLEERIPGKDGEIHVGFTSKQRDEIVAALRLRAAVQPFIDYAKGGGFKLFGDGFVLTNGSREVQHQLTAGDF
Ga0207668_107623521	3300025972	Switchgrass Rhizosphere	MWPAAAMIADYLEQRLPGKDGEIHVGFTSKQRDQVVAALRLREAAEPFIAFAKSGSFKLFGDDFVLTNGPRQAHRQLTARDFRALLAVGE
Ga0207668_113327421	3300025972	Switchgrass Rhizosphere	GKDGEIHVGFTSKQRDEIVAALRLRAAVQPFIAYAKGGSFKLFGDGFVLTNGSREVQHQLTAGDFRALLAAAGEEEA
Ga0207677_103378262	3300026023	Miscanthus Rhizosphere	MIADYLEERIPGKDGEIHVGFTSKQRDEIVAALRLRAAVQPFIAYAKGGSFKLFGDGFVLTNGSREVQHQLTAGDFRALLAAAGEEDA
Ga0207677_108089772	3300026023	Miscanthus Rhizosphere	MPTVPKQGQSAMTMLPSATMIADYLEERIPDKDGEIRVGFTSKERDQIVAALRQREAMEPFIAFAKAGTFKLFGDGFVLTNGSREAQRQLTAGDFRALLAAAGEEEA
Ga0207703_121759351	3300026035	Switchgrass Rhizosphere	TMLPSATMIADYLEERIPDKDGEIRVGFTSKERDQIVAALRQREAMEPFIAFAKAGTFKLFGDGFVLTNGSREAQRQLTAGDFRALLAAAGEEEA
Ga0207678_101349933	3300026067	Corn Rhizosphere	MIADYLEERIPGKDGEIHVGFTSKQRDEIVAALRLRAAVQPFIAYAKGGSFKLFGDGFVLTNGSREVQHQLTAGDFRALLAAAGEEEA
Ga0207675_1017089781	3300026118	Switchgrass Rhizosphere	MWPAAAMIADYLEQRLPGKDGEIHVGFTSKQRDQVVAALRLREAAEPFIAFAKSGSFKLFGDDFVLTNGSRQAQRQLTAGDFRALLAAAGEEEA
Ga0179587_105065882	3300026557	Vadose Zone Soil	MIAHYLEERIPDKDGEIHVAFTSKQREQIVAALRLREAAEPFIAFAKSGSFKLFGDDFVLTNGSRLAHRQLTAGDFRALAAAAGEQEA
Ga0209488_103169693	3300027903	Vadose Zone Soil	MTMWPSAAMIAHYLEERIPDKDGEIHVAFTSKQREQIVAALRLREAAEPFIAFAKSGSFKLFGDDFVLTNGSRLAHRQLTAGDFRALAAAAGEQEA
Ga0268266_100075779	3300028379	Switchgrass Rhizosphere	MTMWPSATMIADYLEERIPGKDGEIHVGFTSKQRDEIVAALRLRAAVQPFIDYAKGGGFKLFGDGFVLTNGSREVQHQLTAGDFRALLAAAGEEEA
Ga0268265_123511432	3300028380	Switchgrass Rhizosphere	LEQLLPGKDGEIHVGFTSKQRDQVVAALRLREAAEPFIAFAKSGSFKLFGDDFVLTNGARQAHRQLTASDFRALLAAVGEKEA
Ga0268264_119856241	3300028381	Switchgrass Rhizosphere	KDGEIHVGFTSKQRDQVVAALRLREAAEPFIAFAKSGSFKLFGDDFVLTNGPRQAHRQLTARDFRALLAAVGEKEA
Ga0307322_102037851	3300028710	Soil	MTMWPSAAMIANYLEERLSDKDGEIHVAFTSKQRDQVVAALRLREAAEPFITFAKSGNFKLFGDDFVLTNGSRQAHRQLTAGDFRALLAAAGEDEA
Ga0307301_100665342	3300028719	Soil	MTMWPSAAMIANYLEERLSDKDGEIHVAFTSKQRDQVVAALRLREAAEPFIAFAKSGSFKLFGDDFVLTNGSRQAHRQLTAGDFRALLAAAGEEEA
Ga0307316_102844011	3300028755	Soil	AMIANYLEERLSDKDGEIHVAFTSKQRDQVVAALRLREAAEPFIAFAKSGSFKLFGDDFVLTNGSRQAHRQLTAGDFRALLAAAGEEEA
Ga0307517_106452461	3300028786	Ectomycorrhiza	LSKDNLSPPCLFRTAGAGAMTMWPSAALIADYLEQLLPGKDGEIHVGFTSKQRDQVVAALRLREAAEPFIAFAKSGSFKLFGDDFVLTNGPRQAHRQLTASDFRALLAAVGEKEA
Ga0307289_102366981	3300028875	Soil	MWPSAALIADYLEQLLPGKDGEIHVDFTSKQRDQVVAALRLREAAEPFITFAKSGNFKLFGDDFVLTNGSRQAHRQLTAGDFRALLAAAGEEEA
Ga0307286_101565361	3300028876	Soil	MWPSAALIADYLEQLLPGKDGEIHVDFTSKQRDQVLAALRLREAAEPFIAFAKSGSFKLFGDDFVLTNGARQAHRQLTASDFRALLAAVGEKEA
Ga0307286_102994472	3300028876	Soil	MTMWPSAAMIANYLEERLSDKDGEIHVAFTSKQRDQVVAALRLREAAEPFITFAKSGNFKLFGDDFVLTNGSRQAHRQLTAGDFRALLAAAGEE
Ga0307498_100093413	3300031170	Soil	MTMWPSAASIADYLEQLLPGKDGEIHVGFTSKQRDQVVAALRLREAAEPFIAFAKSGSFKLFGDDFVLTNGARQAHRQLTASDFRALLAAVGEKEA
Ga0307498_100123331	3300031170	Soil	MTMWPSAAVIADYLEERMPDKDGEIRVGFTSKQRDQIVAALRQSEAVEPFIVFAKAGTFKQFGDEFVLTNGSRQAERQLTAGDFRALLAAVGEEEA
Ga0307500_100150791	3300031198	Soil	MTMWPSAALIADYLEQLLPGKDGEIHVGFTSKQRDQVVAALRLREAAEPFIAFAKSGSFKLFGDDFVLTNGARQAHRQLTASDFRALLAAVGEKEA
Ga0307508_104241201	3300031616	Ectomycorrhiza	MWPTAAMIADYLEQRLPGKDGEIHVGFTSKQRDQVVAALRLREAAEPFIAFAKSGSFKLFGDDFVLTNGARQAHRQLTASDFRALLAAVGEKEA
Ga0307510_1000388821	3300033180	Ectomycorrhiza	MWPSAASIADYLEQLLPGKDGEIHVGFTSKQRDQVVAALRLREAAEPFIAFAKSGSFKLFGDDFVLTNGARQAHRQLTASDFRALLAAVGEKEA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F058232

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences