NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F058204

Metagenome / Metatranscriptome Family F058204

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F058204
Family Type Metagenome / Metatranscriptome
Number of Sequences 135
Average Sequence Length 52 residues
Representative Sequence KKIEKIVVNIGAAKEILTTVANGRFLKAINIAIKAIKPDKHLKKCNPGLLV
Number of Associated Samples 115
Number of Associated Scaffolds 135

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 96.30 %
% of genes from short scaffolds (< 2000 bps) 91.11 %
Associated GOLD sequencing projects 111
AlphaFold2 3D model prediction Yes
3D model pTM-score0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (55.556 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine
(23.704 % of family members)
Environment Ontology (ENVO) Unclassified
(61.481 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(91.852 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 54.43%    β-sheet: 0.00%    Coil/Unstructured: 45.57%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.57
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 135 Family Scaffolds
PF01625PMSR 73.33
PF00581Rhodanese 13.33
PF16576HlyD_D23 4.44
PF00873ACR_tran 1.48
PF00892EamA 1.48
PF01176eIF-1a 0.74
PF04892VanZ 0.74

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 135 Family Scaffolds
COG0225Peptide methionine sulfoxide reductase MsrAPosttranslational modification, protein turnover, chaperones [O] 73.33
COG0361Translation initiation factor IF-1Translation, ribosomal structure and biogenesis [J] 0.74


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A55.56 %
All OrganismsrootAll Organisms44.44 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2166559017|JCVI_READ_748913Not Available949Open in IMG/M
3300001355|JGI20158J14315_10046684All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1869Open in IMG/M
3300002040|GOScombined01_100962432All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1935Open in IMG/M
3300002176|JGI24820J26691_1114774Not Available522Open in IMG/M
3300002242|KVWGV2_10871004Not Available616Open in IMG/M
3300005432|Ga0066845_10240560All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria699Open in IMG/M
3300005523|Ga0066865_10365060Not Available548Open in IMG/M
3300005837|Ga0078893_10951373Not Available506Open in IMG/M
3300005960|Ga0066364_10125964Not Available870Open in IMG/M
3300006024|Ga0066371_10046139All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1249Open in IMG/M
3300006329|Ga0068486_1458226All Organisms → cellular organisms → Bacteria → Proteobacteria514Open in IMG/M
3300006337|Ga0068495_1076136All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster578Open in IMG/M
3300006337|Ga0068495_1207858All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1325Open in IMG/M
3300006345|Ga0099693_1474355All Organisms → cellular organisms → Bacteria659Open in IMG/M
3300006345|Ga0099693_1584377Not Available502Open in IMG/M
3300006350|Ga0099954_1334931All Organisms → cellular organisms → Bacteria1610Open in IMG/M
3300006412|Ga0099955_1236203Not Available696Open in IMG/M
3300007236|Ga0075463_10069357All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae1138Open in IMG/M
3300007510|Ga0105013_1209376All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1139Open in IMG/M
3300007755|Ga0105014_1063523All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1129Open in IMG/M
3300007962|Ga0102907_1064295All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter979Open in IMG/M
3300008097|Ga0111541_10479351Not Available546Open in IMG/M
3300008097|Ga0111541_10506980Not Available531Open in IMG/M
3300008225|Ga0105352_1045339All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1104Open in IMG/M
3300008954|Ga0115650_1143687All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae1593Open in IMG/M
3300009058|Ga0102854_1229431Not Available532Open in IMG/M
3300009071|Ga0115566_10499884All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium690Open in IMG/M
3300009071|Ga0115566_10717689All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium553Open in IMG/M
3300009126|Ga0118723_1145695All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1373Open in IMG/M
3300009376|Ga0118722_1015992All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique7578Open in IMG/M
3300009409|Ga0114993_10221183All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1459Open in IMG/M
3300009436|Ga0115008_11235677Not Available568Open in IMG/M
3300009437|Ga0115556_1370821Not Available501Open in IMG/M
3300009443|Ga0115557_1364574Not Available536Open in IMG/M
3300009445|Ga0115553_1008284All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter5806Open in IMG/M
3300009445|Ga0115553_1225298All Organisms → cellular organisms → Bacteria → Proteobacteria740Open in IMG/M
3300009472|Ga0115554_1016892All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter3930Open in IMG/M
3300009476|Ga0115555_1063169All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1641Open in IMG/M
3300009476|Ga0115555_1344525Not Available596Open in IMG/M
3300009481|Ga0114932_10452251Not Available758Open in IMG/M
3300009481|Ga0114932_10683807Not Available598Open in IMG/M
3300009481|Ga0114932_10837931Not Available532Open in IMG/M
3300009497|Ga0115569_10494340All Organisms → cellular organisms → Bacteria → Proteobacteria517Open in IMG/M
3300009498|Ga0115568_10381405Not Available612Open in IMG/M
3300009508|Ga0115567_10338505All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter936Open in IMG/M
3300009512|Ga0115003_10363603Not Available852Open in IMG/M
3300009550|Ga0115013_10120594All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1510Open in IMG/M
3300009550|Ga0115013_11251463Not Available543Open in IMG/M
3300009550|Ga0115013_11376015Not Available523Open in IMG/M
3300010300|Ga0129351_1097461All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1182Open in IMG/M
3300010368|Ga0129324_10387023Not Available541Open in IMG/M
3300010883|Ga0133547_10763028All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1905Open in IMG/M
3300012928|Ga0163110_11396989Not Available566Open in IMG/M
3300012950|Ga0163108_10362403Not Available934Open in IMG/M
3300012952|Ga0163180_10671599Not Available797Open in IMG/M
3300012952|Ga0163180_11609082Not Available547Open in IMG/M
3300012954|Ga0163111_11247040Not Available727Open in IMG/M
3300012954|Ga0163111_11287949Not Available716Open in IMG/M
3300012954|Ga0163111_12126404Not Available567Open in IMG/M
3300013010|Ga0129327_10803453All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium534Open in IMG/M
3300013110|Ga0171652_1033665All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique1397Open in IMG/M
3300017710|Ga0181403_1079489Not Available682Open in IMG/M
3300017726|Ga0181381_1032844All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique1162Open in IMG/M
3300017738|Ga0181428_1167271All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter513Open in IMG/M
3300017742|Ga0181399_1010590All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter2700Open in IMG/M
3300017759|Ga0181414_1191019Not Available531Open in IMG/M
3300017824|Ga0181552_10421377Not Available637Open in IMG/M
3300017962|Ga0181581_10575975Not Available688Open in IMG/M
3300018413|Ga0181560_10180918All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1041Open in IMG/M
3300019283|Ga0182058_1075307Not Available588Open in IMG/M
3300020173|Ga0181602_10382964Not Available557Open in IMG/M
3300020265|Ga0211533_1065565Not Available598Open in IMG/M
3300020269|Ga0211484_1009977All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2063Open in IMG/M
3300020281|Ga0211483_10330221Not Available505Open in IMG/M
3300020296|Ga0211474_1059448Not Available581Open in IMG/M
3300020341|Ga0211592_1114299Not Available558Open in IMG/M
3300020342|Ga0211604_1069287Not Available701Open in IMG/M
3300020350|Ga0211599_1039771All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique1108Open in IMG/M
3300020350|Ga0211599_1041896All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique1078Open in IMG/M
3300020363|Ga0211493_1201727Not Available522Open in IMG/M
3300020371|Ga0211500_1216507Not Available548Open in IMG/M
3300020397|Ga0211583_10091869All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique1147Open in IMG/M
3300020405|Ga0211496_10363512Not Available540Open in IMG/M
3300020413|Ga0211516_10265548Not Available776Open in IMG/M
3300020414|Ga0211523_10406158Not Available550Open in IMG/M
3300020414|Ga0211523_10425695Not Available535Open in IMG/M
3300020419|Ga0211512_10392002Not Available626Open in IMG/M
3300020429|Ga0211581_10075946All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1356Open in IMG/M
3300020429|Ga0211581_10079783All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1321Open in IMG/M
3300020429|Ga0211581_10409065Not Available554Open in IMG/M
3300020430|Ga0211622_10211798Not Available831Open in IMG/M
3300020440|Ga0211518_10016570All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique4805Open in IMG/M
3300020442|Ga0211559_10508555Not Available550Open in IMG/M
3300020446|Ga0211574_10084393All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique1405Open in IMG/M
3300020452|Ga0211545_10185557All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique963Open in IMG/M
3300020456|Ga0211551_10191338All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique971Open in IMG/M
3300020456|Ga0211551_10567060Not Available539Open in IMG/M
3300020462|Ga0211546_10033175All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique2536Open in IMG/M
3300020464|Ga0211694_10148589All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique947Open in IMG/M
3300020465|Ga0211640_10381377Not Available776Open in IMG/M
3300020466|Ga0211714_10476344Not Available590Open in IMG/M
3300020470|Ga0211543_10223720All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique927Open in IMG/M
3300020477|Ga0211585_10022433All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter5193Open in IMG/M
3300021185|Ga0206682_10380160All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium601Open in IMG/M
3300021371|Ga0213863_10257650Not Available745Open in IMG/M
3300022905|Ga0255756_1192014Not Available750Open in IMG/M
3300022921|Ga0255765_1377994Not Available528Open in IMG/M
3300022923|Ga0255783_10056498All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique2328Open in IMG/M
3300022928|Ga0255758_10323148Not Available645Open in IMG/M
3300023105|Ga0255782_10475485All Organisms → cellular organisms → Bacteria → Proteobacteria540Open in IMG/M
3300023175|Ga0255777_10656012All Organisms → cellular organisms → Bacteria → Proteobacteria510Open in IMG/M
3300024180|Ga0228668_1002593All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique5456Open in IMG/M
3300024180|Ga0228668_1076913Not Available619Open in IMG/M
3300024226|Ga0228667_1046169Not Available846Open in IMG/M
3300024235|Ga0228665_1033445All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1056Open in IMG/M
(restricted) 3300024261|Ga0233439_10307105All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium678Open in IMG/M
3300025830|Ga0209832_1204721Not Available550Open in IMG/M
3300025840|Ga0208917_1156000Not Available790Open in IMG/M
3300025876|Ga0209223_10474164All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium515Open in IMG/M
3300025890|Ga0209631_10444388Not Available591Open in IMG/M
3300026199|Ga0208638_1176100Not Available559Open in IMG/M
3300026513|Ga0247590_1107821Not Available719Open in IMG/M
3300027830|Ga0209359_10042968Not Available1724Open in IMG/M
3300027906|Ga0209404_10885844Not Available609Open in IMG/M
3300028132|Ga0228649_1109778Not Available680Open in IMG/M
3300028196|Ga0257114_1045360All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1972Open in IMG/M
3300028196|Ga0257114_1347056Not Available500Open in IMG/M
3300028418|Ga0228615_1094668Not Available825Open in IMG/M
3300028488|Ga0257113_1215432Not Available556Open in IMG/M
3300031644|Ga0308001_10348419Not Available545Open in IMG/M
3300032006|Ga0310344_11629991Not Available523Open in IMG/M
3300032011|Ga0315316_10035592All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique3923Open in IMG/M
3300032073|Ga0315315_11433083Not Available601Open in IMG/M
3300032088|Ga0315321_10537122All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium703Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine23.70%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine12.59%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine9.63%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh8.15%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater5.93%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine5.19%
MarineEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Marine4.44%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater3.70%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient2.22%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine2.22%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface2.22%
Surface SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater2.96%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater2.96%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater1.48%
MarineEnvironmental → Aquatic → Marine → Inlet → Unclassified → Marine1.48%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous1.48%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine1.48%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater0.74%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine0.74%
Environmental And Host-AssociatedEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Environmental And Host-Associated0.74%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater0.74%
MarineEnvironmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine0.74%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater0.74%
Marine Surface WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water0.74%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine0.74%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine0.74%
Methane Seep MesocosmEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Methane Seep Mesocosm0.74%
Marine SedimentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment0.74%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2166559017Marine microbial communities from the Atlantic Ocean, for comparison studies - Ocean5 (GOS 4441573)EnvironmentalOpen in IMG/M
3300001355Pelagic Microbial community sample from North Sea - COGITO 998_met_08EnvironmentalOpen in IMG/M
3300002040GS000c - Sargasso Station 3EnvironmentalOpen in IMG/M
3300002176Marine microbial communities from oxygen minimum zone in mesopelagic equatorial Pacific - METZYME_5_50mEnvironmentalOpen in IMG/M
3300002242Marine sediment microbial communities from Kolumbo Volcano mats, Greece - white/grey matEnvironmentalOpen in IMG/M
3300005432Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV78EnvironmentalOpen in IMG/M
3300005523Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV265EnvironmentalOpen in IMG/M
3300005837Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18EnvironmentalOpen in IMG/M
3300005960Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_SurfaceA_ad_6m_LV_AEnvironmentalOpen in IMG/M
3300006024Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_DCM_ad_63m_LV_BEnvironmentalOpen in IMG/M
3300006329Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT233_1_0500mEnvironmentalOpen in IMG/M
3300006337Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT237_3_0025mEnvironmentalOpen in IMG/M
3300006345Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_0075mEnvironmentalOpen in IMG/M
3300006350Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0075mEnvironmentalOpen in IMG/M
3300006412Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0125mEnvironmentalOpen in IMG/M
3300007236Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNAEnvironmentalOpen in IMG/M
3300007510Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 267m, 250-2.7um, replicate aEnvironmentalOpen in IMG/M
3300007755Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 267m, 2.7-0.2um, replicate bEnvironmentalOpen in IMG/M
3300007962Estuarine microbial communities from the Columbia River estuary - metaG 1556B-02EnvironmentalOpen in IMG/M
3300008097Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_DCM_ad_131m_LV_B (version 2)EnvironmentalOpen in IMG/M
3300008225Methane-oxidizing microbial communities from mesocosms in the Hudson Canyon - EN8B Hudson CanyonEnvironmentalOpen in IMG/M
3300008629Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 200m, 2.7-0.2umEnvironmentalOpen in IMG/M
3300008954Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 247m, 250-2.7umEnvironmentalOpen in IMG/M
3300009058Estuarine microbial communities from the Columbia River estuary - metaG 1370A-02EnvironmentalOpen in IMG/M
3300009071Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405EnvironmentalOpen in IMG/M
3300009126Combined Assembly of Gp0139357, Gp0139356EnvironmentalOpen in IMG/M
3300009376Combined Assembly of Gp0137079, Gp0137080EnvironmentalOpen in IMG/M
3300009409Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150EnvironmentalOpen in IMG/M
3300009436Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M MetagenomeEnvironmentalOpen in IMG/M
3300009437Pelagic marine microbial communities from North Sea - COGITO_mtgs_110414EnvironmentalOpen in IMG/M
3300009443Pelagic marine microbial communities from North Sea - COGITO_mtgs_110421EnvironmentalOpen in IMG/M
3300009445Pelagic marine microbial communities from North Sea - COGITO_mtgs_110331EnvironmentalOpen in IMG/M
3300009472Pelagic marine microbial communities from North Sea - COGITO_mtgs_110404EnvironmentalOpen in IMG/M
3300009476Pelagic marine microbial communities from North Sea - COGITO_mtgs_110407EnvironmentalOpen in IMG/M
3300009481Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaGEnvironmentalOpen in IMG/M
3300009497Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503EnvironmentalOpen in IMG/M
3300009498Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426EnvironmentalOpen in IMG/M
3300009508Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412EnvironmentalOpen in IMG/M
3300009512Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88EnvironmentalOpen in IMG/M
3300009550Marine eukaryotic phytoplankton communities from Atlantic Ocean - South Atlantic ANT15 MetagenomeEnvironmentalOpen in IMG/M
3300010300Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNAEnvironmentalOpen in IMG/M
3300010368Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNAEnvironmentalOpen in IMG/M
3300010883western Arctic Ocean co-assemblyEnvironmentalOpen in IMG/M
3300012928Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaGEnvironmentalOpen in IMG/M
3300012950Marine microbial communities from the Central Pacific Ocean - Fk160115 155m metaGEnvironmentalOpen in IMG/M
3300012952Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 MetagenomeEnvironmentalOpen in IMG/M
3300012954Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaGEnvironmentalOpen in IMG/M
3300013010Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_DNAEnvironmentalOpen in IMG/M
3300013110Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, May cruise - 234m, 250-2.7um, replicate bEnvironmentalOpen in IMG/M
3300017710Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 26 SPOT_SRF_2011-09-28EnvironmentalOpen in IMG/M
3300017726Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24EnvironmentalOpen in IMG/M
3300017738Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 51 SPOT_SRF_2014-02-12EnvironmentalOpen in IMG/M
3300017742Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 22 SPOT_SRF_2011-05-21EnvironmentalOpen in IMG/M
3300017759Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28EnvironmentalOpen in IMG/M
3300017824Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017962Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018413Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011509CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019283Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101404CT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020173Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041408US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020265Marine microbial communities from Tara Oceans - TARA_B100000401 (ERX556012-ERR599088)EnvironmentalOpen in IMG/M
3300020269Marine microbial communities from Tara Oceans - TARA_A100001035 (ERX556080-ERR599041)EnvironmentalOpen in IMG/M
3300020281Marine microbial communities from Tara Oceans - TARA_A100001035 (ERX556022-ERR599116)EnvironmentalOpen in IMG/M
3300020296Marine microbial communities from Tara Oceans - TARA_A100000164 (ERX556002-ERR599140)EnvironmentalOpen in IMG/M
3300020341Marine microbial communities from Tara Oceans - TARA_B100001121 (ERX555908-ERR599066)EnvironmentalOpen in IMG/M
3300020342Marine microbial communities from Tara Oceans - TARA_B100000674 (ERX556117-ERR599036)EnvironmentalOpen in IMG/M
3300020350Marine microbial communities from Tara Oceans - TARA_B100000676 (ERX556036-ERR599084)EnvironmentalOpen in IMG/M
3300020363Marine microbial communities from Tara Oceans - TARA_B000000475 (ERX555958-ERR599173)EnvironmentalOpen in IMG/M
3300020371Marine microbial communities from Tara Oceans - TARA_B100000003 (ERX555978-ERR598991)EnvironmentalOpen in IMG/M
3300020397Marine microbial communities from Tara Oceans - TARA_B100000123 (ERX556052-ERR599075)EnvironmentalOpen in IMG/M
3300020405Marine microbial communities from Tara Oceans - TARA_B000000532 (ERX556129-ERR599012)EnvironmentalOpen in IMG/M
3300020413Marine microbial communities from Tara Oceans - TARA_S200000501 (ERX555962-ERR599092)EnvironmentalOpen in IMG/M
3300020414Marine microbial communities from Tara Oceans - TARA_B100000035 (ERX556019-ERR599028)EnvironmentalOpen in IMG/M
3300020419Marine microbial communities from Tara Oceans - TARA_X000000263 (ERX555964-ERR598955)EnvironmentalOpen in IMG/M
3300020429Marine microbial communities from Tara Oceans - TARA_B100000614 (ERX556134-ERR599032)EnvironmentalOpen in IMG/M
3300020430Marine microbial communities from Tara Oceans - TARA_B100000683 (ERX556126-ERR599160)EnvironmentalOpen in IMG/M
3300020440Marine microbial communities from Tara Oceans - TARA_E500000178 (ERX555952-ERR599043)EnvironmentalOpen in IMG/M
3300020442Marine microbial communities from Tara Oceans - TARA_B100002019 (ERX556121-ERR599162)EnvironmentalOpen in IMG/M
3300020446Marine microbial communities from Tara Oceans - TARA_B100001287 (ERX556031-ERR598989)EnvironmentalOpen in IMG/M
3300020452Marine microbial communities from Tara Oceans - TARA_B100001173 (ERX556054-ERR599078)EnvironmentalOpen in IMG/M
3300020456Marine microbial communities from Tara Oceans - TARA_B100001741 (ERX555984-ERR599123)EnvironmentalOpen in IMG/M
3300020462Marine microbial communities from Tara Oceans - TARA_B100001559 (ERX556040-ERR598986)EnvironmentalOpen in IMG/M
3300020464Marine microbial communities from Tara Oceans - TARA_B100000530 (ERX556075-ERR599101)EnvironmentalOpen in IMG/M
3300020465Marine microbial communities from Tara Oceans - TARA_B100000579 (ERX556060-ERR598961)EnvironmentalOpen in IMG/M
3300020466Marine microbial communities from Tara Oceans - TARA_B100001540 (ERX556059-ERR598968)EnvironmentalOpen in IMG/M
3300020470Marine microbial communities from Tara Oceans - TARA_B100000287 (ERX555976-ERR599053)EnvironmentalOpen in IMG/M
3300020477Marine microbial communities from Tara Oceans - TARA_B100001123 (ERX555935-ERR599156)EnvironmentalOpen in IMG/M
3300021185Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015EnvironmentalOpen in IMG/M
3300021371Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO497EnvironmentalOpen in IMG/M
3300022905Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011509CT metaGEnvironmentalOpen in IMG/M
3300022921Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaGEnvironmentalOpen in IMG/M
3300022923Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaGEnvironmentalOpen in IMG/M
3300022928Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011513CT metaGEnvironmentalOpen in IMG/M
3300023105Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaGEnvironmentalOpen in IMG/M
3300023175Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaGEnvironmentalOpen in IMG/M
3300024180Seawater microbial communities from Monterey Bay, California, United States - 82DEnvironmentalOpen in IMG/M
3300024226Seawater microbial communities from Monterey Bay, California, United States - 81DEnvironmentalOpen in IMG/M
3300024235Seawater microbial communities from Monterey Bay, California, United States - 79DEnvironmentalOpen in IMG/M
3300024261 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_100_MGEnvironmentalOpen in IMG/M
3300025830Pelagic marine microbial communities from North Sea - COGITO_mtgs_110407 (SPAdes)EnvironmentalOpen in IMG/M
3300025840Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025876Pelagic Microbial community sample from North Sea - COGITO 998_met_06 (SPAdes)EnvironmentalOpen in IMG/M
3300025890Pelagic Microbial community sample from North Sea - COGITO 998_met_08 (SPAdes)EnvironmentalOpen in IMG/M
3300026199Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV51 (SPAdes)EnvironmentalOpen in IMG/M
3300026513Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 51R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300027830Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - Surface_A/KNORR_S2/LV (SPAdes)EnvironmentalOpen in IMG/M
3300027906Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300028132Seawater microbial communities from Monterey Bay, California, United States - 61DEnvironmentalOpen in IMG/M
3300028196Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI112_10mEnvironmentalOpen in IMG/M
3300028418Seawater microbial communities from Monterey Bay, California, United States - 16DEnvironmentalOpen in IMG/M
3300028488Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_1320mEnvironmentalOpen in IMG/M
3300031644Marine microbial communities from water near the shore, Antarctic Ocean - #5EnvironmentalOpen in IMG/M
3300032006Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-200_MGEnvironmentalOpen in IMG/M
3300032011Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 3416EnvironmentalOpen in IMG/M
3300032073Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416EnvironmentalOpen in IMG/M
3300032088Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 21515EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
Ocean5-_019523702166559017Environmental And Host-AssociatedPTLSLKKKIEKIVVKIGAANEILTTVANGRFLNAVNIDSNAIRPKKHLEKCNIGLLV
JGI20158J14315_1004668413300001355Pelagic MarineLNKKIEKIVVNIGAAKDILTTVAKGSFLKAMNIATKAINPEKHLKKCKPGLFVL*
GOScombined01_10096243243300002040MarineIDSKVVNIGAANEILVTVASGRFLNAKNIAAKAISPEQHLIKCNPGLFVL*
JGI24820J26691_111477413300002176MarineVVKIGAAKEILTTVASGNFLKAIKIATKAIKPDKHLKECKPGLLV*
KVWGV2_1087100413300002242Marine SedimentANHLNKPTFSLKKKIEKIVVKIGAAKEILTTVARGKFLNAIKIAKSAINPNMHLKKCSPALFV*
Ga0066845_1024056033300005432MarinePTFSLNRNIENIVVKIGAAKDMLTTVARGNFLRAIKIATMAIKPARHLNECNPGLLV**
Ga0066865_1036506013300005523MarineIVVKIGAAKEMLTTVAKGNSLKAINIATSAIKPDMHLNACKPGLFV*
Ga0078893_1095137323300005837Marine Surface WaterKNIEKIVVNIGAANVILTTVANGRFLREINIEINAIKPTRHLFKCKMGLSVL*
Ga0066364_1012596423300005960MarineKKIEKMVVNIGAAKDILTTVAKGKFLNAVNIDSKAIRPKKHLKKCSPALFV*
Ga0066371_1004613913300006024MarineEKIVVKMGAANEILTTVAKGKFHKAINIDIRAIRPNKHLKKCNPALFV*
Ga0068486_145822633300006329MarineTANHLKYPTFSFIRKMEKIVVKIGAAKDILTTVARGRFLIAVNIDKSATRPKKHLKKCKPALLV*
Ga0068495_107613613300006337MarineVNIGAANEILTTVANGKFLKAINIATKAINPKAHLKKCNPALLV*
Ga0068495_120785833300006337MarineLLAKKKIEKIVVNIGAANEMLTTVANGKFRKAINIAIKAINPEPHLKACNPGR*
Ga0099693_147435513300006345MarineNIGAAKEMLTTVANGSCLKAINIAIRAINPEPHLKACKPGR*
Ga0099693_158437713300006345MarineNKKIEKIVVKIGAANEILTTVAKGNFLKAMNIATRAINPDKHLNKCNPGLFV*
Ga0099954_133493133300006350MarineVNIGAAKDMLTTVANGSCLKAINIAISAISPEPHLKACNPGR*
Ga0099955_123620313300006412MarineKIEKIVVNIGAAKEILTTVAKGNFLKAINIATRAINPEIHLRACKPGLLVL*
Ga0075463_1006935733300007236AqueousTFSLRNSIEKIVVKIGVANEMLTTVASGNFLRAIKIAIKEIKPAKHLKKCKFFLLV*
Ga0105013_120937613300007510MarineFSLRKKIEKIVVKIGAANEILTTVAKGKFLKAINIEIKAIRPNRHLKKCSPPLFV*
Ga0105014_106352333300007755MarineFSLRKKIEKIVVKIGAANEILTTVAKGRFLNAINIEIRAIKPNKHLKKCNPALFV*
Ga0102907_106429513300007962EstuarineKNIEKIVVNIGAANEILTTVARGKFLKAINIDIKAIKPAKHLFKCNNGRLVL*
Ga0111541_1047935113300008097MarineHLYKPTLSFNKKIEKIVVKIGAAKEMLTTVANGKLLNAIKIATKAINPDKHLKK*
Ga0111541_1050698013300008097MarineIVVKIGAAKEILTTVASGNFLKAIKIATKAIKPDKHLKVCKPALLV*
Ga0105352_104533933300008225Methane Seep MesocosmFSLKKKIENIVVKIGAAKEILTTVAKGKFLNAINIATKAINPNKHLKKCKPTLFV*
Ga0115658_105520443300008629MarineSLRKNIEKIVVKIGAANEILTTVAKGSFLRAIKMAIIAINPDKHLLK*
Ga0115650_114368713300008954MarineKKIEKIVVKIGAANEILTTVAKGRFLNAINIEIRAIKPNKHLKKCNPALFV*
Ga0102854_122943113300009058EstuarineTRSFSKNIERIVVKIGAAKDMLTTVANGNSLKAIKIATMAIKPEIDLNKCKPGLFVK*
Ga0115566_1049988413300009071Pelagic MarineKIEKIVVKMGAANEILTTVAKGKFLKAINIAIKAINPNKHLKKCKPALFVR*
Ga0115566_1071768913300009071Pelagic MarineKKIENIVVKIGAAKEILTTVANGKFLKAINIETKAIKPNKLLKKCKPALFV*
Ga0118723_114569533300009126MarineFSLNKKIEKIVVKIGAANEMLTTVAKGKFLKAVKIESKAIKPMKHLKKCKPGLFV*
Ga0118722_101599213300009376MarineVVKIGAANEMLTTVANGKFLNAVKIAKRAINPNMHLRKCSPALFV*
Ga0114993_1022118313300009409MarineTFSFKKKIEKIVVKIGAAKEILTTVANGKFLSAINIAIKAINPNKDLKKCKPALFV*
Ga0115008_1123567713300009436MarineIPTFSLNKNIDKIVVKIGAAKDILTTVANGNSLRAIKIATMAINPDRHLNECKPGLFV*
Ga0115556_137082113300009437Pelagic MarineKIEKIVVNIGAAKEILTTVANGKFLKAINIAIKAINPNKHLKKCKPALFVR*
Ga0115557_136457413300009443Pelagic MarineNPTFSLKKKIEKIVVNIGAAKEMLTTVANGKFLSATNIAIKAINPNKHLKKCKPALFVR*
Ga0115553_100828463300009445Pelagic MarineLKIPTFSLNKKIEKIVVNIGAAKDILTTVAKGSFLKAMNIATKAINPEKHLKKCKPGLFVL*
Ga0115553_122529813300009445Pelagic MarineVVKIGAAKEILTTVASGKFLRAINIAIIAIRPKKHLKKCNPALL
Ga0115554_101689213300009472Pelagic MarineLKIPTFSLNKKIEKIVVNIGAAKDILTTVAKGSFLKAMNIATKAINPEKHLKKCKPSLFVL*
Ga0115555_106316933300009476Pelagic MarineKNIEKIVVKIGAAKDMLTTVANGNSLKAIKIATMAIKPEIDLNKCKPGLFVK*
Ga0115555_134452513300009476Pelagic MarineEKIVVKIGAAKDILTTVANGNSLRAIKIATMAINPETHLNKCKPGLFVR*
Ga0114932_1045225113300009481Deep SubsurfaceLSKKIDKIVVKIGAANEMLTTVAKGKFLKAVNIAKSAIKPKKHLKKCKPGLFV*
Ga0114932_1068380713300009481Deep SubsurfaceVKIGAAKDMLTTVANGNSLKAIKIATKAINPDVHLKACKPGRFV*
Ga0114932_1083793113300009481Deep SubsurfaceGAAKDMLTTVANGRLLRAIKIATKAIRPDRHLKRCKPTLLVK*
Ga0115569_1049434023300009497Pelagic MarineMVVNIGAAKEMLTTVASGNSLRAIKIATKAINPEIHLNKCKPGLLVI*
Ga0115568_1038140513300009498Pelagic MarineLKKKIEKIVVNMGAAKEILTTVANGKFLNAINIAIKAIRPNKHLKKCKPALFV*
Ga0115567_1033850533300009508Pelagic MarineTFSLKKKIEKIVVKIGAAKEMLTTVANVKFLSATKIAIKAINPKKHLKKCKPALFVK*
Ga0115003_1036360323300009512MarineLKKKIEKIVVNIGAAKEILTTVANGKFLNAINIAIKATKPNKHLKKCRPALFVE*
Ga0115013_1012059433300009550MarineIEKIVVNIGAANEILTTVANGRFLKAINIAIKAINPKKHLKKCKPALLV*
Ga0115013_1125146323300009550MarineNKKIENIVINIGAAKEILTTVAKGKFLKAINMETKAINPAIHLLKWRKGLVVL*
Ga0115013_1137601513300009550MarineKNIESMVVNIGAAKEILTTVAKGNFLKAIKIAIIAIKPAIHLNACRPGLFV*
Ga0129351_109746113300010300Freshwater To Marine Saline GradientIEKIVVNIGAAKDMLTTVAKGSSLKAINIATSAIKPDKHLSKWSPGLFVW*
Ga0129324_1038702323300010368Freshwater To Marine Saline GradientPTFSLNKNIDKIVVKIGAAKEILTTVAKGNFLSAMKIEINAIKPAMHLAI*
Ga0133547_1076302813300010883MarineNPTFSLKKNIEKIVVKIGAAKEILTTVANGRFLNAINIAIRAINPNKHLKKCKPALFV*
Ga0163110_1139698913300012928Surface SeawaterVKIGAAKDMLTTVARGNFLKAIKIATMAIKPARHLNECNPGLLV*
Ga0163108_1036240313300012950SeawaterHLKKPTFSLKKKIEKIVVKIGAANEMLTTVAKGKFLKAIKIAKRAISPKIHLKKCNPALFV*
Ga0163180_1067159913300012952SeawaterNIEKIVVKIGAANVMLTTVAKGRFLKAVKIESNAAKPKKHLDRCNKGRLVK*
Ga0163180_1160908223300012952SeawaterFNKKIENMVVNIGAANEILTTVANGNSLKAINIATSAIKPDIHLKK*
Ga0163111_1124704023300012954Surface SeawaterPTFSLNKKIEKIVVNIGAAKEILTTVANGNSLKAINIATKAINPEVHLNK*
Ga0163111_1128794913300012954Surface SeawaterIHLKIPTFSLNKKIEKIVVNIGAAKEILTTVARGNFLSAINIATRAIKPDMHLSKCRPALLVI*
Ga0163111_1212640413300012954Surface SeawaterKIEKIVVKIGAAKDMLTTVAKGNFLKAINIATSAINPEAHLKK*
Ga0129327_1080345323300013010Freshwater To Marine Saline GradientEKIVVKIGAAKEILTTVANGKFLKAINIATKAINPNKHLKKCKPTLFV*
Ga0171652_103366533300013110MarineIEKIVVKIGAANEMLTTVAKGKFLKAVKIESKAIKPMKHLKKCKPGLFV*
Ga0181403_107948923300017710SeawaterFNKKIEKIVVNIGAAKEMLTTVAKGKLLKAMKIATKAINPDKHLKKWSPALLVK
Ga0181381_103284413300017726SeawaterRSFNKNIDKIVVKIGAAKDMLTTVANGNSLKAIKIATMAIKPEIDLNKCKPGLFVK
Ga0181428_116727133300017738SeawaterDHLKIPTFSLKKKIEKIVVNIGAAKEILTTVAKGNSLKAINIATSAINPEVHLSMWRPGLFVW
Ga0181399_101059013300017742SeawaterIIEKIVVNIGAAKEILTTVANGKFLNAINIAIKAINPKKHLKKCKPALFVX
Ga0181414_119101923300017759SeawaterNKKIDKIVVKIGAAKEILTTVAKGNSLKAINIATKAIKPDKHLNKCNPALFVX
Ga0181552_1042137723300017824Salt MarshFSPRNNIEKIVVKIGVANEMLTTVARGNFLKAIKIAIKEIIPAKHLRKCKFFRLVK
Ga0181581_1057597523300017962Salt MarshSPRNNIEKIVVKIGVANEMLTTVARGNFLKAIKIAIKEIIPAKHLRKCKFFRLVK
Ga0181560_1018091813300018413Salt MarshRNNIEKIVVKTGVANEMLTTVARGNFLKAIKIAIKEIMPAKHLRKCKFFRLVK
Ga0182058_107530713300019283Salt MarshVKIGVANEMLTTVARGNFLKAIKIAIKEIMPAKHLRKCKFFRLVK
Ga0181602_1038296413300020173Salt MarshFSFNKNIEKMVVKIGAAKEMLTTVARGNFLKAINIAIKAIKPEKHLKKCKPGLFVS
Ga0211533_106556523300020265MarineIEKIVVNIGAAKDMLTTVAKGNFLNAIKIATSAINPDTHLNRCKPGLFVS
Ga0211484_100997713300020269MarineTFSLKKKIENIVVKIGAANEILTTVANGRFLNAVKIDSNAISPKKHLEKCNIGLFVT
Ga0211483_1033022113300020281MarineNIEKIVVNIGAAKVILTTVANGRFLNATNIEIKAIKPARHLFKCKKGLSVL
Ga0211474_105944813300020296MarineKRKMEKIVVKIGAAKDILTTVARGKFLIAVNIDKSATKPKKHLKKCKPALLV
Ga0211592_111429913300020341MarineSLKKKIEKIVVNIGAANEILTTVAKGRFLNAVNIESRAARPKKHLEKCNNGLLVK
Ga0211604_106928723300020342MarineTFSFNKNIEKIVVNIGAAKVILTTVANGRFLRATNIEIKAIKPARHLFKCKKGLSVL
Ga0211599_103977133300020350MarineKIEKIVVNIGAANEMLTTVAKGKFLNAVNIESKAAKPKKHLEKCNNGLLV
Ga0211599_104189613300020350MarineSKNIDSKVVNIGAANEILVTVASGRFLSAKNIAAKAISPEQHLIKCNPGLFVL
Ga0211493_120172713300020363MarineNIGAANEILTTVAKGKFLKAINIDIRAIKPNKHLKKCNPALFV
Ga0211500_121650713300020371MarineFSLKKKIEKMVVNIGAAKDILTTVAKGKFLNAVNIDSKAIRPKKHLKKCSPALFV
Ga0211583_1009186913300020397MarineSFNKNIEKIVVNIGAAKVMLTTVANGRFLSATNIEIKAIKPARHLFK
Ga0211496_1036351223300020405MarineHQKKPTFSLKKKIEKIVVKIGAAKEILTTVAKGKFLNAINIANRAINPKIHLKK
Ga0211516_1026554813300020413MarineKIENIVVNMGAANEMLTTVANGKFLKAMNIATRAINPKAHLKKCNPALLV
Ga0211523_1040615823300020414MarineLNKKIEKIVVNIGAAKEILTTVAKGSSLNAMKMATKAIKPDMHLSECKPGLPVX
Ga0211523_1042569523300020414MarineSFNKKIEKIVVNIGAANEILTTVASGKFLNAMNIEIKATKPAKHLLKCKNGRLVL
Ga0211512_1039200223300020419MarineQLSHLKKKIEKIVVKIGAAKEILTTVARGKFLNAIKIAKSAINPKMHLKKCSPALFV
Ga0211581_1007594613300020429MarineRTFSFNKNIEKIVVNIGAAKVMLTTVANGRFLNATNIEIKAIKPARHLFKCKKGLSVL
Ga0211581_1007978333300020429MarineKIVVNIGAANEILTTVAKGRFLNAVNIESKAAKPKKHLEKCNNGLLV
Ga0211581_1040906513300020429MarineKRTFSFNKNIEKIVVNIGAAKVILTTVANGRFLSATNMDINAIKPARHLFKCRKGRSVL
Ga0211622_1021179813300020430MarineKNIEKIVVNIGAAKVILTTVANGRFLSATNMDINAIKPARHLFKCRKGRSVL
Ga0211518_1001657013300020440MarineIEKIVVNIGAANEILTTVANGRFLKAINIAIKAINPNKHLKKCKPTLFV
Ga0211559_1050855523300020442MarineLLFHLKKKIEKIVVNIGAANEMLTTVAKGKFLNAVNIESKAAKPKKHLEKCNNGLLV
Ga0211574_1008439313300020446MarineKKIEKMVVNIGAANEILTTVANGRFLNAVKIDNKAMRPNKHLLKCSNGLSVV
Ga0211545_1018555713300020452MarineKNQLFHLKKKIEKIVVNIGAAKEILTTVANGRFLKAINIAIKAINPKKHLKKCKLALLV
Ga0211551_1019133833300020456MarineIPTFSLKRKIEKIVVNIGAAKEILTTVANGSSLKAMNIATNAINPDVHLNM
Ga0211551_1056706023300020456MarineANHLKIPTLSLNKNIENIVVKIGAAKDILTTVAKGNSLKAIKIATKAINPDVHLNTCKPGLFV
Ga0211546_1003317513300020462MarineEKIVVKIGAAKEILTTVARGKFLNAIKIAKSAINPNMHLKKCSPALLV
Ga0211694_1014858913300020464MarineIENIVVKIGAAKDILTTVASGKLLRAIKIATKAINPERHLKK
Ga0211640_1038137723300020465MarineASHLYNLTFSFNKKIEKMVVKIGAANVMLTTVANGRFLNAINIEIKATKPARHLFKXRKGLLVL
Ga0211714_1047634413300020466MarineLSKKIDKIVVKIGAANDMLTTVAKGKFLNAVNMDKSAIKPKKHLKKCKPGLLV
Ga0211543_1022372013300020470MarineVVNIGAAKEILTTVANGNFLKAINIATKAIKPEIHLKKCKPGLFVL
Ga0211585_1002243313300020477MarineKKIEKIVVNIGAAKEILTTVANGRFLKAINIAIKAIKPDKHLKKCNPGLLV
Ga0206682_1038016013300021185SeawaterIEKTVVNIGAAKEILTTVASGKFLNAINIAIKAINPNIHLKKCKPTLFV
Ga0213863_1025765023300021371SeawaterFSLNKNMDKIVVKIGAAKEMLTTVAKGNFLSAINIATKAIKPEMHLKK
Ga0255756_119201423300022905Salt MarshNIEKIVVKIGVANEILTTVARGNFLRAIKIAIKEIKPAKHLKKCKFFLLV
Ga0255765_137799413300022921Salt MarshPRNNIEKIVVKIGVANEMLTTVARGNFLKAIKIAIKEIIPAKHLRKCKFFRLVK
Ga0255783_1005649843300022923Salt MarshKIEKIVIKIGAANEILTTVAKGKFLSATNIETKAISPAKHLLKXSTGRVVL
Ga0255758_1032314813300022928Salt MarshTFSPRNNIEKIVVKIGVANEMLTTVARGNFLKAIKIAIKEIMPAKHLRKCKFFRLVK
Ga0255782_1047548513300023105Salt MarshMPTFSLNKKIENIVVNIGAAKEILTTVANGKLLRAIKIATKAINPEKHLKKCKPALFV
Ga0255777_1065601213300023175Salt MarshMPTFSLNKKIENIVVNIGAAKEMLTTVANGKLLRAIKIATKAINPEKHLKKCKPALFV
Ga0228668_100259353300024180SeawaterNPTFSFNRNIEKIVVKIGAANEILTTVARGKFLKAINIDIKAIKPAKHLFKCNNGRLVL
Ga0228668_107691323300024180SeawaterIVVKIGAAKDMLTTVANGNSLKAIKIATMAIKPEIDLNKCKPGLFVK
Ga0228667_104616923300024226SeawaterKIEKIVVNIGAANEILTTVASGKFLNAINIEIKATKPAKHLFKCKNGRLVL
Ga0228665_103344513300024235SeawaterFSFNKKIEKIVVNIGAANEILTTVASGKFLNAINIEIKATKPAKHLLKCKNGRLVL
(restricted) Ga0233439_1030710523300024261SeawaterKIEKIVVNIGAAKEILTTVANGKFLNAINIAIKAINPNMHLKKXRPALFVE
Ga0209832_120472123300025830Pelagic MarineNKKIEKIVVNIGAAKEMLTTVAKGSFLKAINIATKAIKPDIHLSACKPGL
Ga0208917_115600013300025840AqueousFSLRNNIEKIVVKIGVANEMLTTVARGNFLKAIKIAIKEIMPAKHLRKCKFFRLVK
Ga0209223_1047416423300025876Pelagic MarineHLKKPTFSLKKKIENIVVKIGAAKEILTTVANGKFLKAINIAISAIRPKRHLKKCKHALFVW
Ga0209631_1044438823300025890Pelagic MarineNKKIEKIVVNIGAAKDILTTVAKGSFLKAMNIATKAINPEKHLKKCKPGLFVL
Ga0208638_117610013300026199MarineNIEKMVVKTGAANEMLTTVANGRFRNAINMDIKANNPAKHLFKXSKGLFVL
Ga0247590_110782113300026513SeawaterKKIEKIVVNIGAANEMLTTVARGKFLKAINIDINAIKPAKHLLKCKNGRLVL
Ga0209359_1004296813300027830MarineFSPKKKIEKMVVNIGAANEILTTVANGRFLNAVKIDNKAMRPNKHLLKCSNGLSVV
Ga0209404_1088584423300027906MarineEKIVVNIGAAKDILTTVANGNSLKAIKIATKAISPDVHLKKCKPALFV
Ga0228649_110977823300028132SeawaterVVKIGAAKDMLTTVANGNSLKAIKIATMAIKPEIDLNKCKPGLFVK
Ga0257114_104536013300028196MarinePTFSIKKKIEKIVVNIGAAKEILTTVAKGNSLKAMNIATKAIKPETHLSACKPGLSVR
Ga0257114_134705613300028196MarineIGAAKDMLTTVANGNSLKAIKIATMAIKPEIDLNKCKPGLFVK
Ga0228615_109466823300028418SeawaterEKIVVKIGAAKDMLTTVANGNFLKAIKIATMAIKPEIDLNKCKPGLFVK
Ga0257113_121543223300028488MarineFSLSKKIDKIVVKIGAANEILTTVAKGKFLNAVNIDKSAINPKKHLKKCKPGLLV
Ga0308001_1034841923300031644MarineVNMGAAKEILTTVANGKFLSAINIATKAIKPNKHLKKCKPTLLV
Ga0310344_1162999123300032006SeawaterNIEKIVVKIGAANDMLTTVAKGRFRNAINMDTKATNPAKHLFK
Ga0315316_1003559253300032011SeawaterIEKIVVKIGAAKEMLTTVANGKFLNAINIAIKAISPNRHLKKCRPTLFV
Ga0315315_1143308313300032073SeawaterKNIENIVVKIGAAKDILTTVAKGNFLRAIKIATIAMRPAIHLSECKPGLLV
Ga0315321_1053712213300032088SeawaterFSLRKKIEKTVVNIGAAKEILTTVASGKFLNAINIAIKAINPNIHLKKCKPTLFV


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.