Metagenome / Metatranscriptome Family F058122

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F058122
Family Type	Metagenome / Metatranscriptome
Number of Sequences	135
Average Sequence Length	90 residues
Representative Sequence	MMLRRPARSLWVFLGLVVAVGALFGHVLEGAAFAVFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFLSWRRVLPQSPHDQRRMPNLDDY
Number of Associated Samples	112
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	38.52 %
% of genes near scaffold ends (potentially truncated)	39.26 %
% of genes from short scaffolds (< 2000 bps)	82.96 %
Associated GOLD sequencing projects	109
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.333 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (43.704 % of family members)
Environment Ontology (ENVO)	Unclassified (31.852 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.778 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 44.54% β-sheet: 0.00% Coil/Unstructured: 55.46%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF00528	BPD_transp_1	36.57
PF10604	Polyketide_cyc2	13.43
PF00881	Nitroreductase	12.69
PF00578	AhpC-TSA	2.24
PF00497	SBP_bac_3	1.49
PF00005	ABC_tran	1.49
PF00903	Glyoxalase	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.33 %
Unclassified	root	N/A	6.67 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.33 %
Unclassified	root	N/A	6.67 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.33 %
Unclassified	root	N/A	6.67 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	88.15 %
Unclassified	root	N/A	6.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	88.15 %
Unclassified	root	N/A	6.67 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	45.19 %
Unclassified	root	N/A	6.67 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1.48 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.74 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	30.37 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	10.37 %
Unclassified	root	N/A	6.67 %
Nakamurellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales	2.22 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.48 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.74 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.74 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	30.37 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	10.37 %
Unclassified	root	N/A	6.67 %
Nakamurellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae	2.22 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.48 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.74 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.74 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	30.37 %
Unclassified	root	N/A	6.67 %
Nakamurella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella	2.22 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2.22 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.48 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.74 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.74 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	30.37 %
Unclassified	root	N/A	6.67 %
Nakamurella lactea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella lactea	2.22 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.48 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.74 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.74 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.74 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	30.37 %
Unclassified	root	N/A	6.67 %
Nakamurella lactea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella lactea	2.22 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.48 %
Streptomyces sp. AcH 505	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. AcH 505	0.74 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.74 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000887\|AL16A1W_10053905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	696	Open in IMG/M
3300000956\|JGI10216J12902_116605428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	4010	Open in IMG/M
3300001333\|A21PFW6_1056965	All Organisms → cellular organisms → Bacteria	1841	Open in IMG/M
3300004156\|Ga0062589_100442997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1073	Open in IMG/M
3300005093\|Ga0062594_100039268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2287	Open in IMG/M
3300005093\|Ga0062594_103265032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	509	Open in IMG/M
3300005331\|Ga0070670_101879440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	551	Open in IMG/M
3300005335\|Ga0070666_11400023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	522	Open in IMG/M
3300005356\|Ga0070674_101331453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	641	Open in IMG/M
3300005446\|Ga0066686_10029790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella lactea	3170	Open in IMG/M
3300005456\|Ga0070678_100228137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella lactea	1551	Open in IMG/M
3300005458\|Ga0070681_11137602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	702	Open in IMG/M
3300005536\|Ga0070697_101326517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	642	Open in IMG/M
3300005544\|Ga0070686_100099572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella lactea	1961	Open in IMG/M
3300005545\|Ga0070695_100508298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	933	Open in IMG/M
3300005546\|Ga0070696_101876443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	519	Open in IMG/M
3300005614\|Ga0068856_102082346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	577	Open in IMG/M
3300006034\|Ga0066656_10099069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1767	Open in IMG/M
3300006578\|Ga0074059_11249965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	640	Open in IMG/M
3300006604\|Ga0074060_11828337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	993	Open in IMG/M
3300006791\|Ga0066653_10155294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1119	Open in IMG/M
3300009012\|Ga0066710_100244022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2594	Open in IMG/M
3300009012\|Ga0066710_101200686	All Organisms → cellular organisms → Bacteria	1175	Open in IMG/M
3300009038\|Ga0099829_11201507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	628	Open in IMG/M
3300009090\|Ga0099827_10012449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5573	Open in IMG/M
3300009137\|Ga0066709_103182863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	599	Open in IMG/M
3300009177\|Ga0105248_10042727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5083	Open in IMG/M
3300010304\|Ga0134088_10668440	Not Available	520	Open in IMG/M
3300010336\|Ga0134071_10207723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	967	Open in IMG/M
3300011003\|Ga0138514_100010948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1478	Open in IMG/M
3300011991\|Ga0120153_1003140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	6059	Open in IMG/M
3300011998\|Ga0120114_1013020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1842	Open in IMG/M
3300012008\|Ga0120174_1046827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1210	Open in IMG/M
3300012096\|Ga0137389_11175314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	657	Open in IMG/M
3300012189\|Ga0137388_10646324	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	983	Open in IMG/M
3300012204\|Ga0137374_10006852	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	13587	Open in IMG/M
3300012206\|Ga0137380_10090648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2794	Open in IMG/M
3300012207\|Ga0137381_10186003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1798	Open in IMG/M
3300012207\|Ga0137381_11648435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	532	Open in IMG/M
3300012209\|Ga0137379_10881076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	800	Open in IMG/M
3300012350\|Ga0137372_10717451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	723	Open in IMG/M
3300012360\|Ga0137375_10950982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	679	Open in IMG/M
3300012907\|Ga0157283_10068428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	869	Open in IMG/M
3300012922\|Ga0137394_10066888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2989	Open in IMG/M
3300012925\|Ga0137419_11512475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	569	Open in IMG/M
3300012951\|Ga0164300_10296115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	844	Open in IMG/M
3300012957\|Ga0164303_10024961	All Organisms → cellular organisms → Bacteria	2368	Open in IMG/M
3300012957\|Ga0164303_10024961	All Organisms → cellular organisms → Bacteria	2368	Open in IMG/M
3300012958\|Ga0164299_10066038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1757	Open in IMG/M
3300012960\|Ga0164301_10048751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2165	Open in IMG/M
3300012961\|Ga0164302_11646305	Not Available	536	Open in IMG/M
3300012984\|Ga0164309_10513931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	919	Open in IMG/M
3300012985\|Ga0164308_10215156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. AcH 505	1474	Open in IMG/M
3300012986\|Ga0164304_10738485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	752	Open in IMG/M
3300012988\|Ga0164306_10785891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	765	Open in IMG/M
3300012988\|Ga0164306_11768979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	537	Open in IMG/M
3300013294\|Ga0120150_1045750	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300013765\|Ga0120172_1037596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1301	Open in IMG/M
3300013768\|Ga0120155_1108537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	771	Open in IMG/M
3300013770\|Ga0120123_1097803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	667	Open in IMG/M
3300013772\|Ga0120158_10038818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	3486	Open in IMG/M
3300013772\|Ga0120158_10081358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2033	Open in IMG/M
3300014058\|Ga0120149_1221484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	530	Open in IMG/M
3300014326\|Ga0157380_11478840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	732	Open in IMG/M
3300014745\|Ga0157377_11202462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	587	Open in IMG/M
3300014823\|Ga0120170_1022593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1728	Open in IMG/M
3300014829\|Ga0120104_1136973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	502	Open in IMG/M
3300014968\|Ga0157379_11010651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	793	Open in IMG/M
3300018000\|Ga0184604_10053352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1124	Open in IMG/M
3300018028\|Ga0184608_10046241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1700	Open in IMG/M
3300018028\|Ga0184608_10453818	Not Available	552	Open in IMG/M
3300018054\|Ga0184621_10281056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	589	Open in IMG/M
3300018061\|Ga0184619_10156705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1040	Open in IMG/M
3300018066\|Ga0184617_1035657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1204	Open in IMG/M
3300018066\|Ga0184617_1093022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	833	Open in IMG/M
3300018071\|Ga0184618_10092689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1173	Open in IMG/M
3300018071\|Ga0184618_10308549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	674	Open in IMG/M
3300018071\|Ga0184618_10410974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	572	Open in IMG/M
3300019868\|Ga0193720_1002921	All Organisms → cellular organisms → Bacteria	2315	Open in IMG/M
3300019869\|Ga0193705_1102628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	520	Open in IMG/M
3300019873\|Ga0193700_1020478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1092	Open in IMG/M
3300019875\|Ga0193701_1004741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2561	Open in IMG/M
3300019878\|Ga0193715_1069313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	742	Open in IMG/M
3300020002\|Ga0193730_1036160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1431	Open in IMG/M
3300021080\|Ga0210382_10072238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1398	Open in IMG/M
3300022756\|Ga0222622_10052245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2316	Open in IMG/M
3300022756\|Ga0222622_11348282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	525	Open in IMG/M
3300023058\|Ga0193714_1029939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	800	Open in IMG/M
3300025903\|Ga0207680_11107470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	566	Open in IMG/M
3300025926\|Ga0207659_11236001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	642	Open in IMG/M
3300025927\|Ga0207687_10820136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	794	Open in IMG/M
3300025945\|Ga0207679_12170467	Not Available	504	Open in IMG/M
3300026121\|Ga0207683_10153053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2082	Open in IMG/M
3300027875\|Ga0209283_10493225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	789	Open in IMG/M
3300027882\|Ga0209590_10014266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3843	Open in IMG/M
3300028704\|Ga0307321_1059959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	732	Open in IMG/M
3300028705\|Ga0307276_10033012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1083	Open in IMG/M
3300028709\|Ga0307279_10009675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1144	Open in IMG/M
3300028711\|Ga0307293_10140332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	769	Open in IMG/M
3300028713\|Ga0307303_10015262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1418	Open in IMG/M
3300028715\|Ga0307313_10059556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1129	Open in IMG/M
3300028716\|Ga0307311_10128503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	721	Open in IMG/M
3300028717\|Ga0307298_10026751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1519	Open in IMG/M
3300028718\|Ga0307307_10012130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2302	Open in IMG/M
3300028718\|Ga0307307_10206492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	622	Open in IMG/M
3300028720\|Ga0307317_10322375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	522	Open in IMG/M
3300028720\|Ga0307317_10341397	Not Available	506	Open in IMG/M
3300028721\|Ga0307315_10065728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1029	Open in IMG/M
3300028722\|Ga0307319_10196137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	660	Open in IMG/M
3300028722\|Ga0307319_10324874	Not Available	510	Open in IMG/M
3300028755\|Ga0307316_10015764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2376	Open in IMG/M
3300028755\|Ga0307316_10163762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	795	Open in IMG/M
3300028771\|Ga0307320_10079899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1229	Open in IMG/M
3300028784\|Ga0307282_10066732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1629	Open in IMG/M
3300028784\|Ga0307282_10079315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1501	Open in IMG/M
3300028784\|Ga0307282_10331175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	735	Open in IMG/M
3300028784\|Ga0307282_10494434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	594	Open in IMG/M
3300028787\|Ga0307323_10085002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1130	Open in IMG/M
3300028791\|Ga0307290_10038394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1712	Open in IMG/M
3300028791\|Ga0307290_10248768	Not Available	651	Open in IMG/M
3300028793\|Ga0307299_10382432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	528	Open in IMG/M
3300028799\|Ga0307284_10097260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1097	Open in IMG/M
3300028802\|Ga0307503_10098540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1240	Open in IMG/M
3300028803\|Ga0307281_10125049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	884	Open in IMG/M
3300028807\|Ga0307305_10377774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	641	Open in IMG/M
3300028819\|Ga0307296_10105098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1515	Open in IMG/M
3300028824\|Ga0307310_10003888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	5666	Open in IMG/M
3300028824\|Ga0307310_10724901	Not Available	511	Open in IMG/M
3300028828\|Ga0307312_10147190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1492	Open in IMG/M
3300028828\|Ga0307312_10196972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1293	Open in IMG/M
3300028828\|Ga0307312_11014998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	549	Open in IMG/M
3300028828\|Ga0307312_11189958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	504	Open in IMG/M
3300028878\|Ga0307278_10082371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1449	Open in IMG/M
3300031198\|Ga0307500_10251731	Not Available	546	Open in IMG/M
3300031199\|Ga0307495_10092253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	704	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.63%
Host-Associated	Host-Associated	10.37%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.00%
Plants	Host-Associated → Plants	10.37%
Aquatic	Environmental → Aquatic	9.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.26%
Sediment	Environmental → Aquatic → Sediment	8.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.15%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.22%
Freshwater	Environmental → Aquatic → Freshwater	0.74%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.89%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.44%
Loam	Environmental → Terrestrial → Soil → Loam	3.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.70%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.48%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.74%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.74%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	57.78%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	10.37%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.89%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.44%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.70%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.22%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.48%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.74%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	43.70%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.11%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	10.37%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	7.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.22%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.22%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.22%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.96%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.48%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.48%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.48%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.74%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.74%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.74%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000887	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-65cm-16A)- 1 week illumina	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001333	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A21-PF)- 6 month illumina	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300011991	Permafrost microbial communities from Nunavut, Canada - A34_65cm_12M	Environmental	Open in IMG/M
3300011998	Permafrost microbial communities from Nunavut, Canada - A30_35cm_6M	Environmental	Open in IMG/M
3300012008	Permafrost microbial communities from Nunavut, Canada - A39_80cm_12M	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013294	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0M	Environmental	Open in IMG/M
3300013765	Permafrost microbial communities from Nunavut, Canada - A30_80cm_6M	Environmental	Open in IMG/M
3300013768	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0M	Environmental	Open in IMG/M
3300013770	Permafrost microbial communities from Nunavut, Canada - A15_5cm_18M	Environmental	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014058	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0.25M	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014823	Permafrost microbial communities from Nunavut, Canada - A3_80cm_0M	Environmental	Open in IMG/M
3300014829	Permafrost microbial communities from Nunavut, Canada - A10_35cm_6M	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300019868	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s1	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300019873	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300023058	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m1	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028704	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_379	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028709	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_118	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AL16A1W_100539051	3300000887	Permafrost	RTRAALNLCATIPRCGEADNPTMMLRWPARSLWLFLGLVVAVGAVFGHVLEGAAFAVFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFLSWRRVLPQSPDEQRRMPRLDDY*
JGI10216J12902_1166054285	3300000956	Soil	MMLRRPSRSLWVFLGLVVAVGALFGHILEGAAFAVFFLFIASIDHKPAFKAIFDPPGDQDSGRNAGRFLFGRYDGPMSPREQLRMPNYTNRRSK*
A21PFW6_10569651	3300001333	Permafrost	MMLRRPARSLWLFLGLLVAVATVLGHIWDGVAFGAFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFLSWRRVLPQSPHEQRRMPPLDDY*
Ga0062589_1004429973	3300004156	Soil	MMLRRPARSLWVFLGLVVAVGTLFGHVLEGAAFAVFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFLSWRRVPPQSPHDQRRMPNLDDY*
Ga0062594_1000392684	3300005093	Soil	MMLRWPARSLWGFLALIVSVAALFGHIWDGAALAAFLLYVSSIDGKPAFKAQFDAPGSQDSGRGAGRFCTWRRVVPQSPREQRRMPSLKSY*
Ga0062594_1032650321	3300005093	Soil	MMLRRPVRSLWLFLGLVIAVGAVFGHVLEGAAFAAFFLFIASIDHKPAFKALFDPPGNQDSGRSAGRFFLGRYVGPQSPGEQQRMPQQIDRGYK*
Ga0070670_1018794401	3300005331	Switchgrass Rhizosphere	MMLRWPARSLWGFLALIVSVAALFGHIWDGAALAAFLLYVSSIDGKPAFKAQFDAPGSQDSGRGAGRFCTWRRV
Ga0070666_114000231	3300005335	Switchgrass Rhizosphere	GFLALIVSVAALFGHIWDGAALAAFLLYVSSIDGKPAFKAQFDAPGSQDSGRGAGRFCTWRRVVPQSPREQRRMPSLKSY*
Ga0070674_1013314532	3300005356	Miscanthus Rhizosphere	MMLRRPARSLWVFLGLVLAVGTLFGHVLEGAAIAVFFLYVSSIDSKPAFKAQFDAPGSQDSGRGAGRFCTWRRVVPQSPREQRRMPRLNS
Ga0066686_100297903	3300005446	Soil	MMLRRPVRSLWLFLGLVVAVGSLFGHVLEGAAFAVFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFLSWRRVLPQSPREQQRMPRLDDY*
Ga0070678_1002281371	3300005456	Miscanthus Rhizosphere	MMLRWPARSLWGFLALIVSVAALFGHIWDGAALAAFLLYVSSIDGKPAFKAQFDPPGSQDSGRGAGRFCTWRRVVPQSPREQRRMPSLKSY*
Ga0070681_111376021	3300005458	Corn Rhizosphere	MMLRRPARSLWVFLGLVVAVGTLFGHVLEGAAFAVFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFLSWRRVPPQSPHDQRRMPSLDDY*
Ga0070697_1013265172	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MMLRRPAKSLWLFLGLVVAVAALLGHIWDGAGVAAFFLFISSIDHKPAFKAIFDPPGNQDSGRSAGRFLFGRYGGPMSPREQLRMPHYTNRRSR*
Ga0070686_1000995721	3300005544	Switchgrass Rhizosphere	LIVSVAALFGHIWDGAALAAFLLYVSSIDGKPAFKAQFDAPGSQDSGRGAGRFCTWRRVVPQSPREQRRMPSLKSY*
Ga0070695_1005082982	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	LWIFLGLVVAVGTLFGHVLEGAAFAVFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFQSWRRVPPQSPHEQRRMPNLDDY*
Ga0070696_1018764431	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	ARPIIRSMMLRRPVRSLLVFLGLVVAVPAVFGHVLEGVAFAVFFLFIASIDHKPAFKAIFDPPGNQDSGRSAGRFEFGRFNGPMSPQELRRMPQHINRRAK*
Ga0068856_1020823462	3300005614	Corn Rhizosphere	MMLRWPARSLWGFLALIVSVAALFGHIWDGAALAAFLLYVSSIDGKPAFKAQFDAPGSQDSGRGAGRFCTWRRVVPQSPREQRRMPSLKS
Ga0066656_100990693	3300006034	Soil	TVPRRREADNPSMMLRRPVRSLWLFLGLVVAVGSLFGHVLEGAAFAVFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFLSWRRVPPQSPREQQRMPRLDDY*
Ga0074059_112499651	3300006578	Soil	MMLRWPERSFLAFLALIVSVAAVFGHILEGAAIAAFLLYVSSIDGKPAFKAQFDPPGTQDSGRGAGRFCTWRRVVPQSPRDQRRMP
Ga0074060_118283372	3300006604	Soil	MMLRWPARSLWGFLALIVGVTAVFGHIWDGAAVAAFLLYVSSIDGKPAFKAQFDPPGTQDSGRGAGRFCTWRRVMPQSPREQRRMPSLKSY*
Ga0066653_101552941	3300006791	Soil	MMLRRPARSLWVFLGLLVAVGALFSHVLEGAAFAVFFLFISSIDAKPAFKAQFDAPGNQDSGRGAGRFLSWRRVLPQSPHDQRRLPNLDDY*
Ga0066710_1002440223	3300009012	Grasslands Soil	RPVRSLWLFLGLVVAVGSLFGHVLEGAAFAVFFLFISSIDAKPAFKAQFDAPGNQDSGRGAGRFLSWRRVLPQSPREQQRMPRLDDY
Ga0066710_1012006861	3300009012	Grasslands Soil	RPVRSLWLFLGLVVAVGSLFGHVLEGAAFAVFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFLSWRRVPPQSPREQQRMPRLDDY
Ga0099829_112015071	3300009038	Vadose Zone Soil	MMLRWPPRSLWLFLGLVVAVAAVLGHVWDGAAVAAFFLFISSIDAKPAFKAQFDPPGNQDSGRGAGRFLSWRRVLPQSPHEQRHMPRLDDY*
Ga0099827_100124495	3300009090	Vadose Zone Soil	MMLRRPARSLWLFLGLVVAVGAVFGHVSEGAAFAVFFLFISSIDNKPAFKAQFDAPGSQDSGRGAGRFLSWRRVLPQSPHEQRRMPRLDDY*
Ga0066709_1031828632	3300009137	Grasslands Soil	GLVVAVGSLFGHVLEGAAFAVFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFLSWRRVLPQSPREQQRMPRLDDY*
Ga0105248_100427273	3300009177	Switchgrass Rhizosphere	VSVAALFGHIWDGAALAAFLLYVSSIDGKPAFKAQFDAPGSQDSGRGAGRFCTWRRVVPQSPREQRRMPSLKSY*
Ga0134088_106684402	3300010304	Grasslands Soil	MMLRRPVRSLWLFLGLVVAVGSLFGHVLEGAAFAVFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFLSWRRVPPQSPREQQRMPRLDDY*
Ga0134071_102077232	3300010336	Grasslands Soil	MMLRRPVRSLWLFLGLVVAVGSLFGHVLEGAAFAVFFLFISSIDAKPAFKAQFDAPGNQDSGRGAGRFLSWRRVLPQSPREQQRMPRLDDY*
Ga0138514_1000109483	3300011003	Soil	MMLRRPARSLWVFLGLVVAVGTLFGHVMEGAAIAVFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFLTWRRVLPQSPHEQRDMPNLDDY*
Ga0120153_10031408	3300011991	Permafrost	MMLRRPARSLWLFLGLLVAVATVLGHIWDGVAFGAFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFLSWRRVLPQSPHEQRRMPRLDQ*
Ga0120114_10130202	3300011998	Permafrost	MMLRRPARSLWLFLGLLVAVATVLGHIWDGVAFGAFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFLSWRRVLPQSPHEQRRMPPVDDY*
Ga0120174_10468271	3300012008	Permafrost	MMLRRPARSLWLFLGLLVAVATVLGHIWDGVAFGAFFLFISSTDAKPAFKAQFDAPGSQDSGRGAGRFLSWRRVLPQSPHEQRRMPRLDQ*
Ga0137389_111753142	3300012096	Vadose Zone Soil	MMLRWPPRSLWLFLGLVVAVAAVLGHVWDGAAVAAFFLFISSIDAKPAFKAQFDPPGNQDSGRGAGRFLSWRRVLPQSPHEQRHM
Ga0137388_106463242	3300012189	Vadose Zone Soil	MMLRRPTRNLWLFLSLVVAVGALFGHVLEGAAFAVFFLFISSIDHKPAFKALFDPPGNQDSGRSAGRFFFGRYNGPMSPREQRRMPQHVNRRSK*
Ga0137374_100068528	3300012204	Vadose Zone Soil	MMLRRPARSLWVFLGLVVAVGALFGHVLEGAAFAAFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFQSWRRVLPQSPHEQRRMPRLDD*
Ga0137380_100906484	3300012206	Vadose Zone Soil	MMLRRPVRSLWLFLGLVVAVGSLFGHVLEGAAFAVFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFLSWRRVLPQSPHEQRRMPRLDDY*
Ga0137381_101860032	3300012207	Vadose Zone Soil	MMLRRPVRSLWLFLGLVVAVGALFGHVLEGAAFAVFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFLSWRRVPPQSPDEQRRMPRLDDY*
Ga0137381_116484352	3300012207	Vadose Zone Soil	MMLRRPARSLWLFLGLVVAVGAVFGHVSEGAAFAVFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFLSWRRVLPQSPHEQRRMPRLDDY*
Ga0137379_108810762	3300012209	Vadose Zone Soil	MMLRRPVRSLWLFLGLVVAVGSLFGHVLEGAAFAVFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFLSWRRVL
Ga0137372_107174512	3300012350	Vadose Zone Soil	MMLRRPVRSLWLFLGLVVAVGSLFGHVLEGAAFAVFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFLSWRRV
Ga0137375_109509822	3300012360	Vadose Zone Soil	MMLRRPARSLWVFLGLLVAVGALFGHVLEGAAFAVFFLFISSIDAKPAFKAQFDAPGNQDSGRGAGRFLSWRRVLPQSPHDQRRLPNLDDY*
Ga0157283_100684282	3300012907	Soil	MMLRRPARSLWVFLGLVVAVGTLFGHVLEGAAVAAFLLYVSSIDSKPAFKAQFDAPGSQDSGRGAGRFCTWRRVVPQSPRDQRRMPRLNSY*
Ga0137394_100668884	3300012922	Vadose Zone Soil	MVLRRPARSLWVFLGLVVAAGAPFGHILEGAAFAAFFLFIASIDHKPAFKALFDPPGDQDSGRSAGRFLFGRYDGPMSPREQLRMPNYTNRRSK*
Ga0137419_115124751	3300012925	Vadose Zone Soil	MMLRRPTRSLWLFLGLVVSVAAVFGHVLEGAAFAVFFLFISSIDHKPAFKALFDPPGDQDSGRSAGRFWFGRYNGPMSPGEQRRMPQHINRRSR*
Ga0164300_102961151	3300012951	Soil	MMLRWPARSLWGFLALIVSVAAVFGHIWDGAALAAFLLYVSSIDGKPAFKAQFDPPGTQDSGRGAGRFCTWRRVAPQSPRDQRRMPSLKSY*
Ga0164303_100249614	3300012957	Soil	MMLRRPARSLWVFLGLVLAVGTLFGHVLEGAAIAGFFLYVSSIDSKPAFKAQFDAPGSQDSGRGAGRFCTWRRVVPQSPREQRRMPRLNSY*
Ga0164303_100249615	3300012957	Soil	GLVLAVGTLFGHVLEGAAIAVFFLYVSSIDHKPAFKAIFDPPGNQDSGRSAGRYEFGRFSGPMSPQEQRKMPRHINRRAK*
Ga0164299_100660381	3300012958	Soil	MMLRWPARSLWGFLALIVSVAAVFGHIWDGAALAAFLLYVSSIDGKPAFKAQFDAPGSQDSGRGAGRFCTWRRV
Ga0164301_100487512	3300012960	Soil	MMLRRPARSLWIFLGLVLAVGTLFGHVLEGAAIAVFFLYVSSIDSKPAFKAQFDAPGSQDSGRGAGRFCTWRRVVPQSPREQRRMPRLNSY*
Ga0164302_116463052	3300012961	Soil	MMLRWPARSLWGFLALIVSVAAVFGHIWDGAALAAFLLYVSSIDGKPAFKAQFDPPGSQDSGRGAGRFCTWRRVVPQSPREQRRMPRLNSY*
Ga0164309_105139312	3300012984	Soil	MMLRRPVRSLWVFLGLVLAVGTLFGHVLEGAAIAVFFLYVSSIDSKPAFKAQFDAPGSQDSGRGAGRFCTWRRVVPQSPREQRRMPRLNSY*
Ga0164308_102151563	3300012985	Soil	GFLALIMTVSAVFGHILEGAAIAGFLLYVSSIDSKPAFKAQFDAPGSQDSGRGAGRFCTWRRVAPQSPREQQRMPSLKSY*
Ga0164304_107384852	3300012986	Soil	MMLRRPARSLWVFLGLVLAVGTLFGHVLEGAAIAVFFLYVSSIDSKPAFKAQFDAPGSQDSGRGAGRFCTWRRVVPQSPREQRRMPRLNSY*
Ga0164306_107858912	3300012988	Soil	MMLRRPARSLWVFLGLVLAVGTLFGHVLEGAAIAVFFLYVSSIDSKPAFKAQFDAPGSQDSGRGAGRFCTWRRVVPQSPREQRRMPSLKSY*
Ga0164306_117689792	3300012988	Soil	VSVAALFGHIWDGAALAAFLLYVSSIDGKPAFKAQFDPPGSQDSGRGAGRFCTWRRVVPQSPREQRRMPSLKSY*
Ga0120150_10457502	3300013294	Permafrost	MMLRWPARSLWLFLGLVVAVGAVFGHFLEGAAFAVFFLFISSIDAKPTFKAQFDAPGSQDSGRGAGRFLSWRRVLPQSPDEQRRMPRLDDY*
Ga0120172_10375963	3300013765	Permafrost	MMLRWPARSLWLFLGLVVAVGAVFGHVLEGAAFAVFFLFISSIDAKPAFKAQFDAPGTQDSGRGAGRFLSWRRVLPQSPDEQRRMPRLDDY*
Ga0120155_11085372	3300013768	Permafrost	MMLRRPARSLWLFLGLVVAVAALLGHIWDGAAVAAFFLFISSIDHKPAFKAIFDPPGNQDSGRSAGRFLFGRYAGPMSPREQRRMPHYTNRRSR*
Ga0120123_10978032	3300013770	Permafrost	MMLRRPARSLWLFLGLLVAVATVLGHIWDGVAFGAFFLFISSIDAKPAFKAQFDAPGDQDSGRGAGRFLSWRRVPPQSPDEQRRMPRLDDY*
Ga0120158_100388184	3300013772	Permafrost	MMLRRPARSLWVFLGLVVAVPALLGHVLEGAAFAVFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFLSWRRVLPQSPHDQRRMPRLDDH*
Ga0120158_100813582	3300013772	Permafrost	MMLRRPARSLWLFLGLVVVVGALFGHVLEGAAFAVFFLFISSIDAKPAFKAQFDAPGDQDSGRGAGRFVSWRRVQPQSPHEQRRMPNLDDY*
Ga0120149_12214842	3300014058	Permafrost	MMLRWPVRSLWLFLGLVVAVGAVFGHFLEGAAFAVFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFLSWRRVLPQSPDEQRRMPRLDDY*
Ga0157380_114788401	3300014326	Switchgrass Rhizosphere	MMLRWPARSLWGFLALIVSVAALFGHIWDGAALAAFLLYVSSIDGKPAFKAQFDAPGSQDSGRGAGRFCTWRRVVPQSPREQRRMPSLK
Ga0157377_112024621	3300014745	Miscanthus Rhizosphere	RSDGADNRPMMLRWPARSLWGFLALIVSVAALFGHIWDGAALAAFLLYVSSIDGKPAFKAQFDAPGSQDSGRGAGRFCTWRRAVPQSPREQRRMPSLKSY*
Ga0120170_10225933	3300014823	Permafrost	MMLRRPARSLWLFLGLLVAVATVLGHIWDGVAFGAFFLFISSIDAKPAFKAQFDAPGTQDSGRGAGRFLSWRRVLPQSPHEQRRMPRLDDY*
Ga0120104_11369731	3300014829	Permafrost	MMLRRPARSLWLFLGLLVAVATVLGHIWDGVAFGAFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFLSWRRVPP
Ga0157379_110106511	3300014968	Switchgrass Rhizosphere	SATIPRSDGADNRPMMLRWPARSLWGFLALIVSVAALFGHIWDGAALAAFLLYVSSIDGKPAFKAQFDAPGSQDSGRGAGRFCTWRRVVPQSPREQRRMPSLKSY*
Ga0184604_100533521	3300018000	Groundwater Sediment	ATTRSILLPMMLRRPARSLWVFLGLVVAVGTLFGHVLEGAAFAVFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFLSWRRVPPLSPHDQRRMPNLDDY
Ga0184608_100462414	3300018028	Groundwater Sediment	MMLRRPAKSLWVFLGLLVAVGALFGHVLEGAAFAAFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFLSWRRVLPESPHDQRRLPNLDDY
Ga0184608_104538181	3300018028	Groundwater Sediment	VDTSPMMLRRPARSLWVFLGLVFAVGALFGHVLEGTAFAVFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFCSWRRVPPQSPHDQRRMPNLDDY
Ga0184621_102810562	3300018054	Groundwater Sediment	MMLRRPARSLWVFLGLVVAVGTLFGHVLEGAAFAVFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFLSWRRVLPESPHDQRRLPSLDDY
Ga0184619_101567052	3300018061	Groundwater Sediment	MMVRRPVKSLWLFLGLVVVVGAVFGHVLEGVAFAVFFLFISSIDAKPAFKAQFDAPGSQDSGRSAGRFWFGRYNGPMSPREQLRMPQYYTKRRSR
Ga0184617_10356572	3300018066	Groundwater Sediment	MMLRRPARSLWVFLGLVVAVGTLFGHVLEGAAFAVFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFLSWRRVPPQSPHDQRRMPNLDDY
Ga0184617_10930222	3300018066	Groundwater Sediment	LRRPARSLWVFLGLVVAVGTLFGHVLEGAAFAVFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFLTWRRVLPQSPHEQRHMPNLDDY
Ga0184618_100926892	3300018071	Groundwater Sediment	MMLRRPARSLWLFLGLVVVVGAVFGHVLEGAAFAAFFLFISSIDHKPAFKAIFDPPGNQDSGRDAGRFLFARYNGPMSPREQLKMPNYTNRRSK
Ga0184618_103085491	3300018071	Groundwater Sediment	MMLRRPARSLWVFLGLVVAVGAVFGHVLEGAAFAVFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFLSWRRVLPESPHDQRRLPNLDDY
Ga0184618_104109741	3300018071	Groundwater Sediment	LGLVVAVPALFGHVLEGAAFAVFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFLSWRRVPPQSPHDQRRMPNLDDY
Ga0193720_10029214	3300019868	Soil	LGLVVAVGALFGHVLEGAAFAVFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFLSWRRVLPQSPHDQRRMPNLDDY
Ga0193705_11026282	3300019869	Soil	MMLRRPARSLWVFLGLVVAVGTLFGHVLEGAAFAVFFLFISSIDAKPAFKAQFDAPGTQDSGRGAGRFLSWRRVPPQSPHDQRRMPNLDDY
Ga0193700_10204783	3300019873	Soil	RPARSLWVFLGLVFAVGALFGHVLEGTAFAVFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFCSWRRVPPQSPHDQRRMPNLDDY
Ga0193701_10047414	3300019875	Soil	MMLRRPARSLWVFLGLVVAVGALFSHVLEGAAFAVFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFLSWRRVLPQSPHDQRRMPNLDDY
Ga0193715_10693132	3300019878	Soil	SATIPRASEADNPFMMVRRPARSLWLFLGLVVAVPALFGHVLEGAAFAVFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFLSWRRVLPQSPHDQRRMPNLDDY
Ga0193730_10361602	3300020002	Soil	MMLRRPARSLWVFLGLVVAVGALFSHVLEGAAFAVFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFCSWRRVPPQSPHDQRRMPNLDDY
Ga0210382_100722382	3300021080	Groundwater Sediment	MMLRKPARSLWVFLGLVVAVPALFGHVLEGAAFAVFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFLSWRRVSPQSPHDQRRMPNLDDY
Ga0222622_100522454	3300022756	Groundwater Sediment	GFRIEGTAYSHPRTRAALNLSATIRRASEADNPFMMVRRPVRSLWLFLGLVVAVPALFGHVLEGAAFAVFFLFISSIDAKPAFKAQFDAPGTQDSGRGAGRFLSWRRVPPQSPHDQRRMPNLDDY
Ga0222622_113482822	3300022756	Groundwater Sediment	VIVSVAAVFGHIWDGAAVAAFLLYVSSIDSKPAFKAQFDAPGSQDSGRGAGRFCTWRRVVPQSPREQRRMPRLNSY
Ga0193714_10299391	3300023058	Soil	LWVFLGLVVAVGALFSHVLEGAAFAVFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFLSWRRVLPLSPHDQRRMPNLDDY
Ga0207680_111074702	3300025903	Switchgrass Rhizosphere	GFLALIVSVAALFGHIWDGAALAAFLLYVSSIDGKPAFKAQFDAPGSQDSGRGAGRFCTWRRVVPQSPREQRRMPSLKSY
Ga0207659_112360012	3300025926	Miscanthus Rhizosphere	MMLRWPARSLWGFLALIVSVAALFGHIWDGAALAAFLLYVSSIDGKPAFKAQFDAPGSQDSGRGAGRFCTWRRVVPQSPREQRRMPSLKSY
Ga0207687_108201362	3300025927	Miscanthus Rhizosphere	PARSLWGFLALIVSVAALFGHIWDGAALAAFLLYVSSIDGKPAFKAQFDAPGSQDSGRGAGRFCTWRRVVPQSPREQRRMPSLKSY
Ga0207679_121704671	3300025945	Corn Rhizosphere	MLRWPARSLWGFLALIVSVAALFGHIWDGAALAAFLLYVSSIDGKPAFKAQFDAPGSQDSGRGAGRFCTWRRVVPQSPREQRRMPSLKSY
Ga0207683_101530533	3300026121	Miscanthus Rhizosphere	MMLRWPARSLWGFLALIVSVAALFGHIWDGAALAAFLLYVSSIDGKPAFKAQFDPPGSQDSGRGAGRFCTWRRVVPQSPREQRRMPSLKSY
Ga0209283_104932252	3300027875	Vadose Zone Soil	MMLRWPPRSLWLFLGLVVAVAAVLGHVWDGAAVAAFFLFISSIDAKPAFKAQFDPPGNQDSGRGAGRFLSWRRVLPQSPHEQRHMPRLDDY
Ga0209590_100142664	3300027882	Vadose Zone Soil	MMLRRPARSLWLFLGLVVAVGAVFGHVSEGAAFAVFFLFISSIDNKPAFKAQFDAPGSQDSGRGAGRFLSWRRVLPQSPHEQRRMPRLDDY
Ga0307321_10599591	3300028704	Soil	RKPARSLWVFLGLVVAVGALFGHVLEGAAFAVFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFLSWRRVLPQSPHDQRRMPNLDDY
Ga0307276_100330122	3300028705	Soil	MMLRRPARSLWVFLGLIVAVGTLFGHVMEGAAIAVFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFLTWRRVLPQSPHEQRHMPNLDDY
Ga0307279_100096752	3300028709	Soil	MMLRRPARSLWVFLGLVVAVGALFGHVLEGAAFAVFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFLSWRRVLPQSPHDQRRMPNLDDY
Ga0307293_101403322	3300028711	Soil	VRSLWLFLGLVVVVGAVFGHVLEGAAFAAFFLFIASIDHKPAFKALFDPPGDQDSGRSAGRFLFGRYDGPMSPREQLRMPNYTNRRSK
Ga0307303_100152621	3300028713	Soil	MMLRRPARSLWVFLGLVVAVGALFGHVLEGAAFAVFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFCSWRRVPPQSPHDQRRMPNLDDY
Ga0307313_100595563	3300028715	Soil	AVLNGNTTLSGDDEADTSPMMLRRPARSLWVFLGLVVAVGALFGHVLEGAAFAVFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFCSWRRVPPQSPHDQRRMPNLDDY
Ga0307311_101285032	3300028716	Soil	VLGLLVAVGALFGHVLEGAAFAAFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFLSWRRVLPESPHGQRRLPNLDDY
Ga0307298_100267511	3300028717	Soil	VFAVGALFGHVLEGTAFAVFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFLSWRRVLPQSPHDQRRMPNLDDY
Ga0307307_100121303	3300028718	Soil	MMLRRPARSLWVFLGLVVAVGALFSHVLEGAAFAVFFLFISSIDAKPAFKAQFDAPGTQDSGRGAGRFCSWRRVPPQSPHDQRRMPNLDDY
Ga0307307_102064921	3300028718	Soil	RSLWVFLGLVVAVGALFGHVLEGAAFAVFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFLSWRRVLPQSPHDQRRMPNLDDY
Ga0307317_103223751	3300028720	Soil	MMLRRPAKSLWVFLGLLVAVGALFGHVLEGAAFAAFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFLSWRRVLPESPHGQRRLPNLDDY
Ga0307317_103413971	3300028720	Soil	RAVLNGNATVSGDNEVDTSPMMLRRPARSLWVFLGLVFAVGALFGHVLEGTAFAVFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFLSWRRVLPQSPHDQRRMPNLDDY
Ga0307315_100657282	3300028721	Soil	MLRRPARSLWVFLGLVFAVGALFGHVLEGTAFAVFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFCSWRRVPPQSPHDQRRMPNLDDY
Ga0307319_101961371	3300028722	Soil	DPHAATELHGQPLAVRSLWLFLGLVVVVGAVFGHVLEGAAFAAFFLFIASIDHKPAFKALFDPPGDQDSGRSAGRFLFGRYDGPMSPREQLRMPNYTNRRSK
Ga0307319_103248741	3300028722	Soil	DTLPMMLRRPARSLWVFLGLVVAVGTLFGHVLEGAAFAVFFLFISSIDAKPAFKAQFDAPGTQDSGRGAGRFLSWRRVPPQSPHDQRRMPNLDDY
Ga0307316_100157643	3300028755	Soil	MMLRRPARSLWVFLGLVFAVGALFGHVLEGTAFAVFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFCSWRRVPPQSPHDQRRMPNLDDY
Ga0307316_101637622	3300028755	Soil	TASCDDEVDTLPMMLRRPARSLWVFLGLVVAVGTLFGHVLEGAAFAVFFLFISSIDAKPAFKAQFDAPGTQDSGRGAGRFLSWRRVPPQSPHDQRRMPNLDDY
Ga0307320_100798993	3300028771	Soil	MMLRRPARSLWVFLGLVVAVGTLFGHVLEGAAFAVFFLFISSIDAKPAFKAQFDAPGTQDSGRGAGRFLSWRRVLPLSPHDQRRMPNLDDY
Ga0307282_100667322	3300028784	Soil	MMLRRPVRSLWLFLGLVVAVPAVFGHVLEGTAFAIFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFLSWRRVLPQSPHEQRRMPNLDDY
Ga0307282_100793153	3300028784	Soil	AVGALFGHVLEGTAFAVFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFCSWRRVPPQSPHDQRRMPNLDDY
Ga0307282_103311751	3300028784	Soil	MMLRRPARSLWVFLGLLVAVGTLFGHVLEGAAFAVFFLFISSIDAKPAFKAQFDAPGTQDSGRGAGRFLSWRRVPPQSPHDQRRMPNLD
Ga0307282_104944341	3300028784	Soil	ASYRPRTRAALNSSATIPPSGEADNRSMMLRRPAKSLWLFLGLVVAVAALLGHIWDGAGVAAFFLFISSIDHKPAFKAIFDPPGNQDSGRSAGRFLFGRYGGPMSPREQLRMPHYTNRRS
Ga0307323_100850023	3300028787	Soil	LVFAVGALFGHVLEGTAFAVFFLFISSIDAKPAFKAQFDAPGTQDSGRGAGRFCSWRRVPPQSPHDQRRMPNLDDY
Ga0307290_100383942	3300028791	Soil	LWVFLGLVVAVGALFGHVLEGAAFAVFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFLSWRRVLPQSPHDQRRMPNLDDY
Ga0307290_102487681	3300028791	Soil	ASRSRATASCRPRNRAILNRNTTASCDDEVDTLPMMLRRPARSLWVFLGLVVAVGTLFGHVLEGAAFAVFFLFISSIDAKPAFKAQFDAPGTQDSGRGAGRFLSWRRVPPQSPHDQRRMPNLDDY
Ga0307299_103824321	3300028793	Soil	MMLRRPARSLWVFLGLVVAVGTLFGHVLEGAAFAVFFLFISSIDAKPAFKAQFDAPGTQDSGRGAGRFCSWRRVPPQSPHDQR
Ga0307284_100972601	3300028799	Soil	MMLRRPARSLWVFLGLLVAVGTLFGHVLEGAAFAVFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFLSWRRVPPQSPHDQRRMPNLDDY
Ga0307503_100985402	3300028802	Soil	MMLRWPARSLWGFLALIVSVAAVFGHIWDGAALAAFLLYVSSIDGKPAFKAQFDAPGSQDSGRGAGRFCTWRRVVPQSPREQRRMPPLNSY
Ga0307281_101250491	3300028803	Soil	MMLRRPAKSLWLFLGLVVAVGAVFGHVLEGAAFAVFFLFITSIDHKPAFKALFDPPGNQDSGRSAGRFMFGRFGGPMSPREQRQMPQHINHRSK
Ga0307305_103777741	3300028807	Soil	MMLRRPARSLWVFLGLVVAVGAVFGHVLEGAAFATFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFLSWRRVLPQS
Ga0307296_101050981	3300028819	Soil	MLNRNTTVSCDDEVDTLPMMLRRPARSLWVFLGLVVAVGTLFGHVLEGAAFAVFFLFISSIDAKPAFKAQFDAPGTQDSGRGAGRFLSWRRVPPQSPHDQRRMPNLDDY
Ga0307310_100038886	3300028824	Soil	MMLRRPARSLWVFLGLVFAVGALFGHVLEGTAFAVFFLFISSIDAKPAFKAQFDAPGTQDSGRGAGRFCSWRRVPPQSPHDQRRMPNLDDY
Ga0307310_107249012	3300028824	Soil	NTTASCDDEVDTLPMMLRRPARSLWVFLGLVVAVGTLFGHVLEGAAFAVFFLFISSIDAKPAFKAQFDAPGTQDSGRGAGRFLSWRRVPPQSPHDQRRMPNLDDY
Ga0307312_101471901	3300028828	Soil	FLGLVFAVGALFGHVLEGTAFAVFFLFISSIDAKPAFKAQFDAPGTQDSGRGAGRFCSWRRVPPQSPHDQRRMPNLDDY
Ga0307312_101969722	3300028828	Soil	MMLRRPAKSLWLFLGLVVAVAALLGHIWDGAGVAAFFLFISSIDHKPAFKAIFDPPGNQDSGRSAGRFLFGRYGGPMSPREQLRMPHYTNRRSR
Ga0307312_110149982	3300028828	Soil	EADNPPMMLRRPAGSLWIFLGLLVAVATVLGHIWDGVAFGVFFLFISSIDAKPAFKAQFDAPGDQDSGRGAGRFLTWRRVLPQSPHEQRRMPRLDDY
Ga0307312_111899582	3300028828	Soil	MMLRRPARSLWLFLGLVVAVPAVFGHILEGMAFAVFFLFISSIDAKPAFKAQFDAPGSQDSGRGAGRFLSWRRVLPQSPDEQRRMPRLDDY
Ga0307278_100823713	3300028878	Soil	MMLRRPVRSLWLFLGLVVVVGAVFGHVLEGVAFAVFFLFVSSIDNKPAFKALYDPPGDQDSGRSAGRFWFGRYDGPMSPREQLRMPQYYNRRSR
Ga0307500_102517312	3300031198	Soil	MMLRAPARSLWVFLGLVVAVGTLFGHVLEGAAVAAFLLYVSSIDSKPAFKAQFDAPGSQDSGRGAGRFCTWRRVVPQSPREQRRMPRLNSY
Ga0307495_100922532	3300031199	Soil	MMLRAPARSFWVFLGLVVAVGTLFGHVLEGAAVAAFLLYVSSIDSKPAFKAQFDAPGSQDSGRGAGRFCTWRRVVPQSPREQRRMPRLNSY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F058122

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences