Metagenome Family F058102

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F058102
Family Type	Metagenome
Number of Sequences	135
Average Sequence Length	65 residues
Representative Sequence	MSSKAQAVIEEFNRLPQSEQLAVYEAIARKVTPASYGPLSDEDLTAIAAETFALLDEEESRAQSR
Number of Associated Samples	102
Number of Associated Scaffolds	135

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	21.64 %
% of genes near scaffold ends (potentially truncated)	26.67 %
% of genes from short scaffolds (< 2000 bps)	68.89 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (75.556 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen (10.370 % of family members)
Environment Ontology (ENVO)	Unclassified (38.519 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.889 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.76% β-sheet: 0.00% Coil/Unstructured: 46.24%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 135 Family Scaffolds
PF02452	PemK_toxin	29.63
PF13274	DUF4065	2.22
PF14099	Polysacc_lyase	1.48
PF04198	Sugar-bind	1.48
PF07638	Sigma70_ECF	1.48
PF00814	TsaD	1.48
PF01977	UbiD	0.74
PF01833	TIG	0.74
PF13240	zinc_ribbon_2	0.74
PF00202	Aminotran_3	0.74
PF11026	DUF2721	0.74
PF14714	KH_dom-like	0.74
PF02738	MoCoBD_1	0.74
PF13709	DUF4159	0.74
PF09723	Zn-ribbon_8	0.74
PF03484	B5	0.74
PF13395	HNH_4	0.74
PF07586	HXXSHH	0.74
PF02416	TatA_B_E	0.74
PF07637	PSD5	0.74
PF07690	MFS_1	0.74
PF13544	Obsolete Pfam Family	0.74
PF00483	NTP_transferase	0.74
PF00724	Oxidored_FMN	0.74
PF06250	YhcG_C	0.74
PF00575	S1	0.74
PF03720	UDPG_MGDP_dh_C	0.74
PF07963	N_methyl	0.74
PF12894	ANAPC4_WD40	0.74
PF13419	HAD_2	0.74
PF00486	Trans_reg_C	0.74
PF10543	ORF6N	0.74
PF13088	BNR_2	0.74
PF02729	OTCace_N	0.74
PF17132	Glyco_hydro_106	0.74
PF02608	Bmp	0.74
PF01455	HupF_HypC	0.74
PF00903	Glyoxalase	0.74
PF07495	Y_Y_Y	0.74
PF17189	Glyco_hydro_30C	0.74
PF00899	ThiF	0.74
PF13500	AAA_26	0.74
PF06071	YchF-GTPase_C	0.74
PF12215	Glyco_hydr_116N	0.74
PF01402	RHH_1	0.74
PF00011	HSP20	0.74
PF01609	DDE_Tnp_1	0.74
PF13360	PQQ_2	0.74
PF00012	HSP70	0.74
PF01909	NTP_transf_2	0.74
PF08327	AHSA1	0.74
PF02780	Transketolase_C	0.74
PF00180	Iso_dh	0.74
PF01408	GFO_IDH_MocA	0.74
PF13478	XdhC_C	0.74

COG ID	Name	Functional Category	% Frequency in 135 Family Scaffolds
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	29.63
COG0533	tRNA A37 threonylcarbamoyltransferase TsaD	Translation, ribosomal structure and biogenesis [J]	1.48
COG1214	tRNA A37 threonylcarbamoyladenosine modification protein TsaB	Translation, ribosomal structure and biogenesis [J]	1.48
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	1.48
COG2390	DNA-binding transcriptional regulator LsrR, DeoR family	Transcription [K]	1.48
COG1744	Lipoprotein Med, regulator of KinD/Spo0A, PBP1-ABC superfamily, includes NupN	Signal transduction mechanisms [T]	0.74
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.74
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.74
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.74
COG4804	Predicted nuclease of restriction endonuclease-like (RecB) superfamily, DUF1016 family	General function prediction only [R]	0.74
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.74
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.74
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.74
COG1902	2,4-dienoyl-CoA reductase or related NADH-dependent reductase, Old Yellow Enzyme (OYE) family	Energy production and conversion [C]	0.74
COG1826	Twin-arginine protein secretion pathway components TatA and TatB	Intracellular trafficking, secretion, and vesicular transport [U]	0.74
COG0012	Ribosome-binding ATPase YchF, GTP1/OBG family	Translation, ribosomal structure and biogenesis [J]	0.74
COG0642	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.74
COG0443	Molecular chaperone DnaK (HSP70)	Posttranslational modification, protein turnover, chaperones [O]	0.74
COG0298	Hydrogenase maturation factor HybG, HypC/HupF family	Posttranslational modification, protein turnover, chaperones [O]	0.74
COG0072	Phenylalanyl-tRNA synthetase beta subunit	Translation, ribosomal structure and biogenesis [J]	0.74
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.74
COG0043	3-polyprenyl-4-hydroxybenzoate decarboxylase	Coenzyme transport and metabolism [H]	0.74
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	75.56 %
Unclassified	root	N/A	24.44 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	75.56 %
Unclassified	root	N/A	24.44 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	75.56 %
Unclassified	root	N/A	24.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.44 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	17.04 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.48 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.74 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.74 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.44 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	14.81 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	2.22 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.74 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.74 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.74 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.74 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.44 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	7.41 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	2.22 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	1.48 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.74 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.74 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.74 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.44 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	7.41 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.22 %
Phycisphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales	1.48 %
Oscillatoriophycideae	subclass	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae	0.74 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	0.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.74 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.74 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.44 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	5.93 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.22 %
Phycisphaeraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → Phycisphaeraceae	1.48 %
Chroococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales	0.74 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	0.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.74 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.74 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.44 %
Pedosphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	3.70 %
unclassified Verrucomicrobia subdivision 3	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3	2.22 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.22 %
unclassified Phycisphaeraceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → Phycisphaeraceae → unclassified Phycisphaeraceae	1.48 %
Chroococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales	0.74 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	0.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.74 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.74 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.44 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	3.70 %
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	2.22 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.22 %
Phycisphaeraceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → Phycisphaeraceae → unclassified Phycisphaeraceae → Phycisphaeraceae bacterium	1.48 %
Chroococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales	0.74 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	0.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.74 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.74 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10267020	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300000567\|JGI12270J11330_10267403	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300001213\|JGIcombinedJ13530_101342931	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300002183\|JGI24145J26757_10033538	Not Available	1222	Open in IMG/M
3300005529\|Ga0070741_10001938	All Organisms → cellular organisms → Bacteria	58370	Open in IMG/M
3300005534\|Ga0070735_10174451	All Organisms → cellular organisms → Bacteria	1325	Open in IMG/M
3300005576\|Ga0066708_10831215	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300005994\|Ga0066789_10436096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales	547	Open in IMG/M
3300006055\|Ga0097691_1043083	All Organisms → cellular organisms → Bacteria	1634	Open in IMG/M
3300006638\|Ga0075522_10476497	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300009012\|Ga0066710_104303799	Not Available	532	Open in IMG/M
3300009444\|Ga0114945_10021359	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	3459	Open in IMG/M
3300009502\|Ga0114951_10332824	Not Available	772	Open in IMG/M
3300009552\|Ga0116138_1004448	All Organisms → cellular organisms → Bacteria	5999	Open in IMG/M
3300009630\|Ga0116114_1150314	Not Available	595	Open in IMG/M
3300009637\|Ga0116118_1256216	Not Available	536	Open in IMG/M
3300009639\|Ga0116122_1083414	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1049	Open in IMG/M
3300009700\|Ga0116217_10148161	All Organisms → cellular organisms → Bacteria	1569	Open in IMG/M
3300009868\|Ga0130016_10011219	All Organisms → cellular organisms → Bacteria	14778	Open in IMG/M
3300010341\|Ga0074045_10272306	All Organisms → cellular organisms → Bacteria	1115	Open in IMG/M
3300010343\|Ga0074044_10389306	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300010379\|Ga0136449_100567400	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1946	Open in IMG/M
3300010379\|Ga0136449_102301249	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300011270\|Ga0137391_11436690	Not Available	535	Open in IMG/M
3300012210\|Ga0137378_11414002	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300012361\|Ga0137360_10662473	Not Available	895	Open in IMG/M
3300012362\|Ga0137361_10115606	All Organisms → cellular organisms → Bacteria	2357	Open in IMG/M
3300012923\|Ga0137359_10549426	All Organisms → cellular organisms → Bacteria	1016	Open in IMG/M
3300014155\|Ga0181524_10449947	Not Available	554	Open in IMG/M
3300014155\|Ga0181524_10501573	Not Available	516	Open in IMG/M
3300014158\|Ga0181521_10012423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	8005	Open in IMG/M
3300014160\|Ga0181517_10018091	All Organisms → cellular organisms → Bacteria	4991	Open in IMG/M
3300014489\|Ga0182018_10211232	All Organisms → cellular organisms → Bacteria	1081	Open in IMG/M
3300014489\|Ga0182018_10578280	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300014490\|Ga0182010_10414689	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300014491\|Ga0182014_10012890	All Organisms → cellular organisms → Bacteria	7911	Open in IMG/M
3300014491\|Ga0182014_10056486	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → Phycisphaeraceae → unclassified Phycisphaeraceae → Phycisphaeraceae bacterium	2645	Open in IMG/M
3300014492\|Ga0182013_10042734	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3564	Open in IMG/M
3300014493\|Ga0182016_10545372	Not Available	665	Open in IMG/M
3300014494\|Ga0182017_10189894	All Organisms → cellular organisms → Bacteria	1316	Open in IMG/M
3300014496\|Ga0182011_10211952	Not Available	1314	Open in IMG/M
3300014498\|Ga0182019_10020926	All Organisms → cellular organisms → Bacteria	3572	Open in IMG/M
3300014498\|Ga0182019_10052505	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2366	Open in IMG/M
3300014498\|Ga0182019_10158658	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1438	Open in IMG/M
3300014501\|Ga0182024_10094192	All Organisms → cellular organisms → Bacteria	4393	Open in IMG/M
3300014502\|Ga0182021_10622231	All Organisms → cellular organisms → Bacteria	1293	Open in IMG/M
3300014502\|Ga0182021_12447649	Not Available	628	Open in IMG/M
3300014839\|Ga0182027_10001059	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	46357	Open in IMG/M
3300014839\|Ga0182027_10003664	All Organisms → cellular organisms → Bacteria	24158	Open in IMG/M
3300014839\|Ga0182027_10006406	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	17616	Open in IMG/M
3300014839\|Ga0182027_10280000	All Organisms → cellular organisms → Bacteria	1895	Open in IMG/M
3300014839\|Ga0182027_10291414	All Organisms → cellular organisms → Bacteria	1850	Open in IMG/M
3300017935\|Ga0187848_10035958	All Organisms → cellular organisms → Bacteria	2464	Open in IMG/M
3300017935\|Ga0187848_10076552	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1557	Open in IMG/M
3300017941\|Ga0187850_10001144	All Organisms → cellular organisms → Bacteria	30177	Open in IMG/M
3300017988\|Ga0181520_10161234	All Organisms → cellular organisms → Bacteria	1810	Open in IMG/M
3300017988\|Ga0181520_10237638	All Organisms → cellular organisms → Bacteria	1403	Open in IMG/M
3300017988\|Ga0181520_10743419	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300017988\|Ga0181520_10948745	Not Available	572	Open in IMG/M
3300018017\|Ga0187872_10029083	All Organisms → cellular organisms → Bacteria	3106	Open in IMG/M
3300018021\|Ga0187882_1136954	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300018021\|Ga0187882_1322588	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300018023\|Ga0187889_10192342	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300018024\|Ga0187881_10360708	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	598	Open in IMG/M
3300018038\|Ga0187855_10754689	Not Available	567	Open in IMG/M
3300018088\|Ga0187771_11176548	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300019785\|Ga0182022_1144009	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1217	Open in IMG/M
3300020084\|Ga0194110_10040714	All Organisms → cellular organisms → Bacteria	4337	Open in IMG/M
3300021171\|Ga0210405_10108351	All Organisms → cellular organisms → Bacteria	2193	Open in IMG/M
3300021405\|Ga0210387_10683261	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300021602\|Ga0194060_10022059	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3941	Open in IMG/M
3300022524\|Ga0224534_1008087	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → Phycisphaeraceae → unclassified Phycisphaeraceae → Phycisphaeraceae bacterium	3506	Open in IMG/M
3300022555\|Ga0212088_10001546	All Organisms → cellular organisms → Bacteria	50514	Open in IMG/M
3300022563\|Ga0212128_10064283	All Organisms → cellular organisms → Bacteria	2366	Open in IMG/M
3300023101\|Ga0224557_1185151	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300023101\|Ga0224557_1306379	Not Available	503	Open in IMG/M
3300025444\|Ga0208189_1021324	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1387	Open in IMG/M
3300025548\|Ga0208716_1058944	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300025619\|Ga0207926_1138187	Not Available	559	Open in IMG/M
3300025664\|Ga0208849_1134720	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300025852\|Ga0209124_10107153	Not Available	1152	Open in IMG/M
3300027854\|Ga0209517_10011231	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	9786	Open in IMG/M
3300027854\|Ga0209517_10126610	All Organisms → cellular organisms → Bacteria	1672	Open in IMG/M
3300027896\|Ga0209777_10611832	Not Available	787	Open in IMG/M
3300027903\|Ga0209488_10376425	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1053	Open in IMG/M
3300027905\|Ga0209415_10603860	All Organisms → cellular organisms → Bacteria	812	Open in IMG/M
3300027905\|Ga0209415_11075357	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	526	Open in IMG/M
3300027908\|Ga0209006_10072845	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	3062	Open in IMG/M
3300028146\|Ga0247682_1009117	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1711	Open in IMG/M
3300028800\|Ga0265338_10502117	Not Available	854	Open in IMG/M
3300028800\|Ga0265338_10796000	Not Available	648	Open in IMG/M
3300028866\|Ga0302278_10095805	All Organisms → cellular organisms → Bacteria	1665	Open in IMG/M
3300029882\|Ga0311368_10904840	Not Available	591	Open in IMG/M
3300029889\|Ga0246001_1020672	All Organisms → cellular organisms → Bacteria	1927	Open in IMG/M
3300029910\|Ga0311369_11116147	Not Available	615	Open in IMG/M
3300029922\|Ga0311363_10098868	All Organisms → cellular organisms → Bacteria	4029	Open in IMG/M
3300029952\|Ga0311346_10059696	All Organisms → cellular organisms → Bacteria	5335	Open in IMG/M
3300029952\|Ga0311346_11166751	Not Available	604	Open in IMG/M
3300030399\|Ga0311353_10010236	All Organisms → cellular organisms → Bacteria	11164	Open in IMG/M
3300030399\|Ga0311353_10866272	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300030503\|Ga0311370_10173981	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	2933	Open in IMG/M
3300030518\|Ga0302275_10046898	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3279	Open in IMG/M
3300030518\|Ga0302275_10559532	Not Available	561	Open in IMG/M
3300031057\|Ga0170834_111908843	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300031128\|Ga0170823_17080730	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300031231\|Ga0170824_109162209	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300031234\|Ga0302325_12560751	Not Available	606	Open in IMG/M
3300031236\|Ga0302324_102674050	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300031236\|Ga0302324_103247326	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300031525\|Ga0302326_12542962	Not Available	641	Open in IMG/M
3300031708\|Ga0310686_109023455	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	3752	Open in IMG/M
3300031708\|Ga0310686_110232958	Not Available	811	Open in IMG/M
3300031708\|Ga0310686_117717307	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300031718\|Ga0307474_11418189	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300031753\|Ga0307477_10194959	Not Available	1410	Open in IMG/M
3300032069\|Ga0315282_10027563	All Organisms → cellular organisms → Bacteria	7415	Open in IMG/M
3300032070\|Ga0315279_10036684	All Organisms → cellular organisms → Bacteria	4869	Open in IMG/M
3300032160\|Ga0311301_10265869	All Organisms → cellular organisms → Bacteria	2802	Open in IMG/M
3300032160\|Ga0311301_10671107	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1468	Open in IMG/M
3300032256\|Ga0315271_11551006	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300032397\|Ga0315287_11740212	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300032515\|Ga0348332_13994759	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300032893\|Ga0335069_10530349	All Organisms → cellular organisms → Bacteria	1361	Open in IMG/M
3300033004\|Ga0335084_10780396	Not Available	971	Open in IMG/M
3300033402\|Ga0326728_10012272	All Organisms → cellular organisms → Bacteria	19111	Open in IMG/M
3300033402\|Ga0326728_10015698	All Organisms → cellular organisms → Bacteria	15677	Open in IMG/M
3300033402\|Ga0326728_10096929	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3599	Open in IMG/M
3300033402\|Ga0326728_10377385	Not Available	1228	Open in IMG/M
3300033405\|Ga0326727_10012935	All Organisms → cellular organisms → Bacteria	18795	Open in IMG/M
3300033405\|Ga0326727_10037471	All Organisms → cellular organisms → Bacteria	8236	Open in IMG/M
3300033433\|Ga0326726_11477486	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	662	Open in IMG/M
3300033513\|Ga0316628_101248714	Not Available	989	Open in IMG/M
3300033890\|Ga0334810_170937	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300034125\|Ga0370484_0226491	Not Available	515	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.78%
Host-Associated	Host-Associated	1.48%
Engineered	Engineered	0.74%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.59%
Aquatic	Environmental → Aquatic	25.19%
Plants	Host-Associated → Plants	1.48%
Wastewater	Engineered → Wastewater	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	51.85%
Freshwater	Environmental → Aquatic → Freshwater	22.96%
Peat	Environmental → Terrestrial → Peat	20.00%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.48%
Marine	Environmental → Aquatic → Marine	0.74%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.74%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	28.89%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	22.22%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	20.00%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	16.30%
Lake	Environmental → Aquatic → Freshwater → Lake	5.93%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.48%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.48%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.74%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.74%
Loam	Environmental → Terrestrial → Soil → Loam	0.74%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.74%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	20.00%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	17.04%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.30%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	12.59%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.93%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	5.19%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.19%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.70%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	2.96%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.96%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	1.48%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.48%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.74%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.74%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.74%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	10.37%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	8.15%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	6.67%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	6.67%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	5.93%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	5.19%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	5.19%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.44%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.70%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	3.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.22%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.22%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.22%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	2.96%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	2.96%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	2.96%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	1.48%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.48%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.48%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.48%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.48%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.48%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.74%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.74%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.74%
Freshwater Lake Hypolimnion	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion	0.74%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.74%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.74%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.74%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.74%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.74%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.74%
Peat	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat	0.74%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.74%
Wastewater	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300002183	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-22A	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006055	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009444	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3	Environmental	Open in IMG/M
3300009502	Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaG	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300009630	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40	Environmental	Open in IMG/M
3300009637	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40	Environmental	Open in IMG/M
3300009639	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009868	Activated sludge microbial diversity in wastewater treatment plant from Tai Wan - Bali plant Bali plant	Engineered	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300019785	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020084	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015032 Kigoma Deep Cast 1200m	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021602	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L222-5m	Environmental	Open in IMG/M
3300022524	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 20-24	Environmental	Open in IMG/M
3300022555	Alinen_combined assembly	Environmental	Open in IMG/M
3300022563	OV2_combined assembly	Environmental	Open in IMG/M
3300023101	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 10-14	Environmental	Open in IMG/M
3300025444	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40 (SPAdes)	Environmental	Open in IMG/M
3300025548	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025619	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025664	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025852	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-22A (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028146	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK23	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028866	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029889	Peat microbial communities from Marcell Experimental Forest bog in Minnesota, USA - MG_T3F_30cm	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030518	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_2	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300032069	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_20	Environmental	Open in IMG/M
3300032070	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_20	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033890	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-1-M	Environmental	Open in IMG/M
3300034125	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_tus_01_15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_102670201	3300000567	Peatlands Soil	MSSKAQAVLREFNSLPPVEQMAVYEAIARKVTPADYGPLSDEDLTAIAAETFALLDEEEGRAQRTVGADVRRLTF*
JGI12270J11330_102674031	3300000567	Peatlands Soil	LKLQFYRTSFNLQYMSNRALAVIEEFNSLPQVEQLAVYEAIARKVTPAEYGPLSDEDLTAIAAETFALLDQEESRAQSR*
JGIcombinedJ13530_1013429313	3300001213	Wetland	FQGMSTKAQAVLEGFRTLPREEQYAVYESIARSVVPGDYGPMSDDDLTAVAAQTFALLDEEESRAESR*
JGI24145J26757_100335382	3300002183	Arctic Peat Soil	MSSKAQVVLDEFKRLPQGEQRAVYEAIAHTLAPADCGPLSDDELTALAAETFALLDEEESRAQSR*
Ga0070741_1000193840	3300005529	Surface Soil	MSSEAKAVIEEFNRLSRLDQLAVYEAIARKVTPADYGPLSDEDLTTIAAQTFALLDEEEDRARPR*
Ga0070735_101744513	3300005534	Surface Soil	MSSEAQAVIEEFSRLPRTEQLAVYEAIARKVTPADYGPLSDEDLTAIAAETFALLDEEEGRARSR*
Ga0066708_108312151	3300005576	Soil	MSTKAQAVLDTFKSLPRPEQLDVYEKIARSVVPADYGPLSDDDLTSIAAQTFGLLDEEESRAKPR*
Ga0066789_104360961	3300005994	Soil	MSSEAKAVIEEFSRLPRFDQLAVYEAIARKVIPADYGPLSDENLTAIAAQTFALLDEEEDRARPR*
Ga0097691_10430833	3300006055	Arctic Peat Soil	MSTKAQTVLEGFRSLPRDEQYAVYETIARSVTPGDYGRLSDDDLTAIAAQTFSLLDEEESRAQSR*
Ga0075522_104764972	3300006638	Arctic Peat Soil	MSSHAEAVIQEFNILPRMEQMAVYEAIARKVTAADYGPLSDEDLTAIAAETFGLLDKESSQQA*
Ga0066710_1043037991	3300009012	Grasslands Soil	MSAEAQAVLERFTKLPRAEQLSVYEAIARTVGPEDYGPLSDDELTAIAAQAFALLDEEEAGAQPR
Ga0114945_100213594	3300009444	Thermal Springs	MSTKAQALVDEFRNLPRQEQFEVYEAIARSVVPDDYGPLSDDELTAIAAQSFARLDEEESRAQAG*
Ga0114951_103328241	3300009502	Freshwater	VLEGFRSLPRDEQYAVYETIARSVTPGDYGPLSDDDLTTIAAQTFSLLDEEESHAQSR*
Ga0116138_10044481	3300009552	Peatland	MSADAQAVLEKFIKLPRAEQLSVYEAIARTVGPQDYGPLSDNELTAIAAQTFALLDEEETRAHTR*
Ga0116114_11503142	3300009630	Peatland	MSNRALAVIQEFNSLPQVEQLAVYEAIARKVTPVDYGPLSDEDLTAIAAETFALLDEEESRAQSR*
Ga0116118_12562162	3300009637	Peatland	MSFNLLFMSSKAQAVIEEFNRLPQSEQLAVYEAIARKVTPASYGPLSDEDLTAIAAETFALLDEEESRAQSR*
Ga0116122_10834142	3300009639	Peatland	MRVSFQGMSTKAQAVLEGFRSLPRDEQYTVYEMIARSVVPGDYGPLSDDDLTVIAAQTFSLLDEEESRAQSR*
Ga0116217_101481613	3300009700	Peatlands Soil	SMSSKAQAVLREFNSLPPVEQMAVYEAIARKVTPADYGPLSDEDLTAIAAETFALLDEEEGRAQRTVGADVRRLTF*
Ga0130016_100112196	3300009868	Wastewater	MSTKAQAVLEGFKSLPRDEQYVVYETIARTVVPGDYGPLSDDELTDIAAQTFSLLDEEESRAQSG*
Ga0074045_102723062	3300010341	Bog Forest Soil	MSTKAQAVLEGFRSLPRDEQYAVYETIARSVVPGDYGPLSDDDLTAIAAQTFSLLDEEESRAQSR*
Ga0074044_103893063	3300010343	Bog Forest Soil	MSSKAQSVIQEFNNLPQVEQLAVYEAIARKVTPADYGPLSDEDLTAIAAKTFALLDQEEI
Ga0136449_1005674003	3300010379	Peatlands Soil	MEEFNRLPQVEQLAVSEPIARKVTPADYGPLSDEDLTAIAAETFALLDEEESRARSR*
Ga0136449_1023012493	3300010379	Peatlands Soil	LEGFRSLPRDEQYVVYETIARAVAPGDYGPLSDDDLTAIAAQTFSLLDEEESRAQSR*
Ga0137391_114366901	3300011270	Vadose Zone Soil	MSTKAQAVLAEFLNLPRDEQFAVFEAIAHTVTPADYGPLTDEELTAIAAESLAEQRIE
Ga0137378_114140022	3300012210	Vadose Zone Soil	RGGLRFSSNVGKFRSMSTKAQAVLDRFQSLPRDEQLDVYEKIARCLIPEDYGPLSDDDLTGIAAQTFALLDEEESRAKSR*
Ga0137360_106624732	3300012361	Vadose Zone Soil	MSTKAEAIIEQFKSLPKAEQWGVYEAIARSVVPQDYSELSDDELTAIAAQTFALLDEEDERAKSR*
Ga0137361_101156062	3300012362	Vadose Zone Soil	VSTKAQAVVESFYSLPKPEQLVVYVAIARTVVPGNYRPLSDEDLTAIAAETFSSLDEEEQGSKPR*
Ga0137359_105494262	3300012923	Vadose Zone Soil	VSTKAQAVVESFYSLPKPEQLAVYEAIARTLVPGNYGPLSDEDLTAIAAETFSSLDEEEQGAKPR*
Ga0181524_104499471	3300014155	Bog	MSSKAQAVIEEFNSLPPLEQLAVYEAIARKVTPANYGPLSDEDLTAIAAETFALL
Ga0181524_105015731	3300014155	Bog	TSFNLQYMSSKAQSVIQEFNRLPQLEQLAVYEAIARKVTPADYGPLTDEELTAIAAESFALLDREESRAQSR*
Ga0181521_100124231	3300014158	Bog	MSSKAQSVIHEFNSLPQVEQLAVFEAIARKVTPADYGPLSDEDLTAIAAETFA
Ga0181517_100180915	3300014160	Bog	MSSKAQAVIQEFNRLPQIDQLAVYEAIARKVTPADYEPLSDEDLTAIAAETFALLDQEESRAQSR*
Ga0182018_102112324	3300014489	Palsa	MSSKAQAVIEEFNSLPQAEQLAVYEAIARKVIPENYGPLSDEDLTSIAAETFALLDEEESRARSR*
Ga0182018_105782801	3300014489	Palsa	IEEFNSLPQVEQLAVYEAIARKVIPTNYGPLSDEDLTSIAAETFALLDEEEKRAESR*
Ga0182010_104146892	3300014490	Fen	MRVSFQGMSTKAQAVLEGFRSLPRDEQYTVYEMIARSVVPGDYGPLSDDDLTVIAAQ
Ga0182014_100128907	3300014491	Bog	MSTKAEAVLEGFRSLPRDEQYAVYETIARSVVPGDYGALSDDDLTAIAAQTFSLLDEEESRAQSR*
Ga0182014_100564862	3300014491	Bog	MSTKAQTVLEGFRSLPRDEQYTVYEMIARSVVPGDYGPLSDDDLTAIAAQTFSLLDEEESRAQSR*
Ga0182013_100427341	3300014492	Bog	MSDKAQAVIQEFNSLPQAEQLAVYEAIARKVVPANYGPLSDEDLTAIAAETFGFLDGEESRAQTR*
Ga0182016_105453721	3300014493	Bog	HRRPFNLYLMSDKAQAVIQEFNSLPQAEQLAVYEAIARKVVPANYGPLSDEDLTAIAAETFGFLDGEESRAQTR*
Ga0182017_101898942	3300014494	Fen	MSTKAQAVLEGFRTLPREEQYAVYETIARSVVPGDYGPLSDDDLTAVAGQTFALLDEEESRAQSR*
Ga0182011_102119522	3300014496	Fen	MSNRALAVIEEFNSLPQVEQLAVYEAIARKVTPADYGPLSDEDLTAIAAETFALLDEEED
Ga0182019_100209266	3300014498	Fen	MSKKAQAVLEEFKSLPRDEQYAVYETIARTVVPGDYGPLSDGDLTATAAQTFSLLDEEESRAQSR*
Ga0182019_100525053	3300014498	Fen	LDDFKELPREAQWNVYEAIARSVVPEDYGPLSDGDLTAIAARSFAQLDEEEAGAEAR*
Ga0182019_101586582	3300014498	Fen	MSTKAQAVLEGFRTLPREEQYAVYETIARSVVPGDCGPLSDDDLTAVAGQTFALLDEEESRAQSR*
Ga0182024_100941924	3300014501	Permafrost	MSSKAQAVIQDFNSLPQVEQLAVYEAIARKVIPADYGPLSDEDLTAIAAESFALLDEEERRAGSR*
Ga0182024_107831142	3300014501	Permafrost	MGFGLQFRQTSFNLQSMSNRALAFIQEFNSLPQVEQLAVYEAIARKVTPTEYGPLSDEDLTSIAAESFELLDQEESRAQSR*
Ga0182021_106222312	3300014502	Fen	MSTKAQAVLEEFKSLPREEQYAVYETIARTVVPGDYGPLSDDDLTAIAAQTFSLLDEEESRAQSR*
Ga0182021_124476491	3300014502	Fen	MSTKAQTVLAGFRSLPRDEQYAVYETIARSVTPGDYGPLSDDDLTAIAAQTFSLLDEEESRAQSR*
Ga0182027_1000105930	3300014839	Fen	MSNKAQAVIQQFNSLPQVEQLAVYEAIARKVTPADYGPLSDEDLTAIAAESFALLDQEESRAQSR*
Ga0182027_1000366419	3300014839	Fen	MSNRAEAVVREFNSLPHVEQLAVYEAIARTVAPADYGPLSDEDLTAIAAESFALLDEEHSRAQSR*
Ga0182027_1000640619	3300014839	Fen	MSSKAQAVIQEFNRLPQVEQLAVYEAIARKVTPVDYGPLSDEDLTSIAAETFALLDQEESGAQSR*
Ga0182027_102800001	3300014839	Fen	MSTQAQAVLEGFKKLPRAEQYAVYETIARAVAPGDYGPLSDDDLTAIATQTFSLLDEEEACAQSR*
Ga0182027_102914142	3300014839	Fen	MSTKAQAVLEGFRSLPCDEQYAVYEMIARSVIPGDYGALSDDDLTAIAAQTFSLLDEEESRAQPR*
Ga0187848_100359582	3300017935	Peatland	MSSKAQAVIEEFNRLPQSEQLAVYEAIARKVTPASYGPLSDEDLTAIAAETFALLDEEESRAQSR
Ga0187848_100765522	3300017935	Peatland	MRVSFQGMSTKAQAVLEGFRSLPRDEQYTVYEMIARSVVPGDYGPLSDDDLTVIAAQTFSLLDEEESRAQSR
Ga0187850_100011441	3300017941	Peatland	MMPQSMFTCMSADAQAVLEKFIKLPRAEQLSVYEAIARTVGPQDYGPLSDNELTAIAAQTFALLDEEETRAHTR
Ga0181520_101612341	3300017988	Bog	FNSLPRIEQLAVYQVIARKVTPADYGPLSDEDLTAIAAETFALLDEEESRAQSR
Ga0181520_102376384	3300017988	Bog	MSSEAQTVIAEFNNLPPDEQLAVYEVIARKVTPADYGPLSDEDLTAIAAESFALLDQEESRAQSR
Ga0181520_107434193	3300017988	Bog	EFNSLPQAEQMAVYEVIAHKVTPAENGPLSDEDLTAIAAETFGMLDQEERRAESR
Ga0181520_109487452	3300017988	Bog	MSNRALAVIQEFSSLPQAEQLAVYEAIARKVTPADYGPLSDEDLTAIAAESFALLDQEESRAQSR
Ga0187872_100290835	3300018017	Peatland	MSSKAQAVIEEFNRLPQSEQLAVYEAIARKVTPASYGPLSDEDLTAIAAETFALLDEEESRAQLR
Ga0187882_11369541	3300018021	Peatland	AVIQEFNSLPQVEQLAVYEAIARKVTPADYGPLSDEDLTSIAAETFALLDQEEKRAQSR
Ga0187882_13225881	3300018021	Peatland	VLEGFRSLPRDEQYTVYEMIARSVVPGDYGPLSDDDLTVIAAQTFSLLDEEESRAQSR
Ga0187889_101923422	3300018023	Peatland	MRVTFQGMSTKAQAVLEGFRSLPRDEQYTVYEMIARSVVPGDYGPLSDDDLTVIAAQTFSLLDEEESRAQSR
Ga0187881_103607082	3300018024	Peatland	CPFHAMRVSFQGMSTKAQAVLEGFRSLPRDEQYTVYEMIARSVVPGDYGPLSDDDLTVIAAQTFSLLDEEESRAQSR
Ga0187855_107546891	3300018038	Peatland	MSNRAEAVVKEFNSLPQVEQLAVYEAIARTVAPAGYGPLSEEELTAIAAESFALLDE
Ga0187771_111765482	3300018088	Tropical Peatland	MSTKAQAVLEGFRSLPRDEQYAVYETIARSVVPGDYGALSDDDLTAIAAQTFSLLDEEESRAQSR
Ga0182022_11440092	3300019785	Fen	MRSKAQAVLEGFRTLPREEQYAVYETIARSLVPGHCGPLSDEDLTVVAAQTFALLDEDESRAQSW
Ga0194110_100407143	3300020084	Freshwater Lake	MSTKAEAVLEQFKSLRRAEQLAVYEVIARSVVPEDYGPLSDDDLTAIAAETFGLLDEEDLLFS
Ga0210405_101083512	3300021171	Soil	MSSEAKAVIEEFIRLPRHDQLAVYEAIARKVTSADYGPLSDDDLTAIAAESFALLDEEENRAKSR
Ga0210387_106832612	3300021405	Soil	MSSDAKAVIEEFSRLPRPDQLAVYEAIARKVTPADYGPLSDEDLTAIAAQSFALLDEEEDRARPR
Ga0194060_100220594	3300021602	Anoxic Zone Freshwater	VLEGFRSLPRDEQYAVYETIARSVTPGDYGPLSDDDLTTIAAQTFSLLDEEESHAQSR
Ga0224534_10080872	3300022524	Soil	MSTKAQTVLEGFRSLPRDEQYTVYEMIARSVVPGDYGPLSDDDLTAIAAQTFSLLDEEESRAQSR
Ga0212088_1000154624	3300022555	Freshwater Lake Hypolimnion	MSTKAQAVLEGFRSLPRDEQYTVYEMIARFVVPGDYSPLSDDDLTVIAAQTFSLLDEEESRAQSR
Ga0212128_100642834	3300022563	Thermal Springs	MSTKAQALVDEFRNLPRQEQFEVYEAIARSVVPDDYGPLSDDELTAIAAQSFARLDEEESRAQAG
Ga0224557_11851511	3300023101	Soil	MSSKAQAVIQEFNRLPQVEQLAVYEAIARKVTPVDYGPLSDEDLTSIAAETFALLDQEESGAQSR
Ga0224557_13063791	3300023101	Soil	MSNRAEAVVREFNSLPHVEQLAVYEAIARTVAPAGYGPLSDEDLTAIAAESFALLDEEERRAQS
Ga0208189_10213242	3300025444	Peatland	MSSKAQSVIQEFNRLPQLEQLAVYEAIARKVTPADYGPLTDEELTAIAAESFALLDREESRAQSR
Ga0208716_10589442	3300025548	Arctic Peat Soil	MSSKAQVVLDEFKRLPQGEQRAVYEAIAHTLAPADCGPLSDDELTALAAETFALLDEEEPRAQSR
Ga0207926_11381871	3300025619	Arctic Peat Soil	MSTKAQTVLEGFRSLPRDEQYAVYETIARSVTPGDYGPLSDDDLTAIAAETFSFLDEEESRAQSR
Ga0208849_11347202	3300025664	Arctic Peat Soil	MSNEAQAVIHEFNSLPQDEQLAVYEAIARKVIPADYGSLSDDDLTAIAAESFALLDQEESRAQSR
Ga0209124_101071532	3300025852	Arctic Peat Soil	MSSKAQVVLDEFKRLPQGEQRAVYEAIAHTLAPADCGPLSDDELTALAAETFALLDEEESRAQSR
Ga0209517_100112316	3300027854	Peatlands Soil	MSSKAQAVLREFNSLPPVEQMAVYEAIARKVTPADYGPLSDEDLTAIAAETFALLDEEEGRAQRTVGADVRRLTF
Ga0209517_101266102	3300027854	Peatlands Soil	MSNRALAVIEEFNSLPQVEQLAVYEAIARKVTPAEYGPLSDEDLTAIAAETFALLDQEESRAQSR
Ga0209777_106118322	3300027896	Freshwater Lake Sediment	MSTKAQAVLEGFRTLPREEQYAVYETIARAVVPGDCGPLSDDDLTAVAAQTFALLDEEESRAQPR
Ga0209488_103764253	3300027903	Vadose Zone Soil	MSTKAHAVLTGFQSLPRDEQLVVYEKIARCVVPEDSGPLSDDDLPGIAAQTFALLDEE
Ga0209415_106038602	3300027905	Peatlands Soil	MSTKAQAVLEGFKSLPRDEQYAVYETIARSVVPGDYGPLSDDDLTAIAAQTFSLLNEEESRAQPR
Ga0209415_110753572	3300027905	Peatlands Soil	SMSSKALAVMEEFNRLPQVEQLAVSEPIARKVTPADYGPLSDEDLTAIAAETFALLDEEESRARSR
Ga0209006_100728453	3300027908	Forest Soil	VSSEAKAVIDEFGRLSRLDQLAVYEAIARKVTPADYGPLSDDDLTAIAAESFALLDEEENRAKPR
Ga0247682_10091173	3300028146	Soil	MSSEAKAVIDEFSRLPPRDQLAVYEAIARKVTPADYGTLSDDDLTAIAAESFALLDEEENRAKPR
Ga0265338_105021173	3300028800	Rhizosphere	LDEFKSLPRGEQLAVYQAIAHAFVPEDYGLLSDEALTALAAETFTLLDEEESRAQSR
Ga0265338_107960001	3300028800	Rhizosphere	LSNCRGFHSLQSPLNSFNPQIVSSEAKAVIEEFSRLPRLDQLAVYEAIARKVTPADYGPLSDEDLTVIAAQTFELLDEEE
Ga0302278_100958051	3300028866	Bog	VLTVSRAAQAIIQDFNRLPPGEQMAVYEAIARQVTPLDHGPLSDEDLTAIAAESFAMLDEEEKHGQSR
Ga0311368_109048402	3300029882	Palsa	MSRSSHAIIQEFNSLPPVEQLAVYEAIARKVTPAQYEPLSDEDLTVIAAESFAMLDEEESRALSR
Ga0246001_10206722	3300029889	Peat	MSFNLLFMSSKAQAVIEEFNRLPQSEQLAVYEAIARKVTPASYGPLSDEDLTAIAAETFALLDEEESRAQSR
Ga0311369_111161472	3300029910	Palsa	MSRSSHAIIQEFNSLPPVEQLAVYEAIARKVTPAQYEPLSDEDLTVIAAESFAM
Ga0311363_100988681	3300029922	Fen	VAYLSSAAQAIIQDFNRLPPVEQLAVYEAIARKVTPLGYGPLSDDDLTAIAAESFALLDEEEKTAESR
Ga0311346_100596965	3300029952	Bog	VAYLSSAAQAIIQDFNRLPPVEQLAVYEAIAGKVTPLGYGPLSDDDLTAIAAESFALLDEEEKTAESR
Ga0311346_111667512	3300029952	Bog	MSDKAQAVIQEFNSLPQAEQLAVYEAIARKVVPANYGPLSDEDLTAIAAETFGFLDGEESRAQTR
Ga0311353_1001023612	3300030399	Palsa	MSNRALTVIEEFNNLRKAEQIAVYEAIGRHVAPADYAPFSNDDLTAIAAERLALADPDGPKNL
Ga0311353_108662721	3300030399	Palsa	MSNEAKAVIQEFNSLPQAEQLAVYEAIARKVIPADYGPLSDEDLTAIAAESFALLDQEESRAQSR
Ga0311370_101739813	3300030503	Palsa	MSRSSHAIIQEFNSLPPVEQLAVYEAIARKVTPAQYEPLSDEDLTVIAAETFALLDEEESRAQSR
Ga0302275_100468986	3300030518	Bog	VLTVSRAAQAIIQDFNRLPPGEQMAVTPLDHGPLSDEDLTAIAAESFAMLDEEEKHGQSR
Ga0302275_105595321	3300030518	Bog	MSSAAQAIIQDFNRLPPVEQLAVYEAIAGKVTPLGYGPLSDDDLTAIAAESFALLDEEEKTAESR
Ga0170834_1119088431	3300031057	Forest Soil	KTFPSLRFPSQELCFRRMSSKAQAILDEFRSLSRDEQFAVYETIARAVVPDDYGQLSDDDLTSIAAQTFSLLDEEESRAEQR
Ga0170823_170807301	3300031128	Forest Soil	QAILDEFRSLSRDEQFAVYETIARAVVPDDYGQLSDDDLTSIAAQTFSLLDEEESRAEQR
Ga0170824_1091622091	3300031231	Forest Soil	RMSNKAQAILDEFRSLSRDEQFAVYETIARTVVSAGYGQLSDGDLTNIAAQTFSLLDEEESRAEQR
Ga0302325_125607512	3300031234	Palsa	MSNESQAVIHEFNSLPQAEQVAVYEAIARQVIPADYGPLSDEDLTAIAAASFALLDQEESRAQSR
Ga0302324_1026740503	3300031236	Palsa	NEAQAVIQEFNSLPQAEQLVVYEAIARKVIPADYGPLSDEDLTAIAAETFALLDQEESRAQSR
Ga0302324_1032473262	3300031236	Palsa	MSNEAQAVIQQFDSLPQAEQLVVYEAIARKVIPADYGRLSDADLTAIAAESFALLDQEESRAQSR
Ga0302326_125429621	3300031525	Palsa	HEFNSLPQVEQLAVYEAIARKVTPADYGPLSDEELTAIAAESFALLDREESRAQSR
Ga0310686_1090234553	3300031708	Soil	MSSEAEAVIHEFNSLPQTEQLAVYEAIARKVTPTDYGPLSDEDLTAIAAETFALLDEEERRAQSR
Ga0310686_1102329582	3300031708	Soil	VSNEAQAVIQEFNRLPQAEQLAVYEAIARKVIPADYGPLSDEDLTAIAAESFALLDQEESRAQSR
Ga0310686_1177173072	3300031708	Soil	MSNKAEAVIQDFNSLPQVEQWAVYEAIARKVVPSDYGPLSDEDLTAIAADTFALLDEEESRAQPR
Ga0307474_114181892	3300031718	Hardwood Forest Soil	MSNKALAVIQEFNSLPQAEQMAVYEAIARKVTPADYGPLSDEDLTAIAAETLALLDQEESRAQSR
Ga0307477_101949591	3300031753	Hardwood Forest Soil	MSSKAQAVLEQFNSLPQVEQLAVYEAITRKVTPADYGPLSDEDLTAIAAETFAL
Ga0315282_100275634	3300032069	Sediment	MSAGAQAVLEQFIKLPRAEQLSVYEAIARAVGPQDYGPLSDDELTAIAAQTFALLDEEETRAHPR
Ga0315279_100366841	3300032070	Sediment	MSADAQAVLEQFIKLPRAEQLSVYEAIARAGGPQDYGPLSDDELTAIAAQTFALLDE
Ga0311301_102658691	3300032160	Peatlands Soil	MSDKAQAVIEEFNRLPHVEQLAVYEAIARKVTPADYGPLSDEDLTAIAAETFALLD
Ga0311301_106711073	3300032160	Peatlands Soil	MSSKALAVMEEFNRLPQVEQLAVSEPIARKVTPADYGPLSDEDLTAIAAETFALLDEEESRARSR
Ga0315271_115510062	3300032256	Sediment	MSTKAQAVLEGFRSLPRDEQYVVYETIARCVAPGDYGPLSDDDLTAIAAQTFSLLDEEESRAQSR
Ga0315287_117402122	3300032397	Sediment	VSTKAQAVLDDFKGLPREEQWSVYEAIARSVVPEDYGSLSDDDLTAIAAQTFALLDEEEARAASR
Ga0348332_139947592	3300032515	Plant Litter	MSKQAEAVIQNFNGLSQVEPLAVYEAIARKVTPADYGLLSDEDLTAIAAETFELLDQEESRALSR
Ga0335069_105303492	3300032893	Soil	MSTKAQAVLEGFKSLPRDEQYAVYETIARSVVPGDYGPLSDDDLTAIAAQTFSLLDEEESRAQPR
Ga0335084_107803963	3300033004	Soil	MSTKAQAVLEGFRSLPRDEQYAVYEMIARSVTPGDYGPLSDDDLTAIAAQTFS
Ga0326728_100122726	3300033402	Peat Soil	MSSKAEVMVQEFNRLPKVEPLAVYEAIARKVTPADYGPLSDEDLTAIAAETFALLDQEESRAQSR
Ga0326728_1001569813	3300033402	Peat Soil	MSNRALAVIQEFNSLPQVEQLAVYEAIARKVTPVDYGPLSDEDLTAIAAETFALLDEEESRAQPR
Ga0326728_100969292	3300033402	Peat Soil	MAVQPMFRPMSTDAHALLEKFITLPRAEQLSVYEAIARTVGPVDYGPLSDDELTAIAAQTFALLDEEDTRAQSR
Ga0326728_103773854	3300033402	Peat Soil	SLQSCGMSFNLLSMSSKAQAVIEEFNRLPQSEQLAVYEAIARKVTPASYGPLSDEDLTAIAAETFALLDEEESRARSR
Ga0326727_1001293513	3300033405	Peat Soil	MSSKAQAVIEEFNRLPQSEQLAVYEAIARKVTPASYGPLSDEDLTAIAAETFALLDEEESRARSR
Ga0326727_100374711	3300033405	Peat Soil	MSSKAEVMVQEFNRLPKVEPLAVYEAIARKVTPADYGPLSDEDLTAIAAETFALLDQE
Ga0326726_114774862	3300033433	Peat Soil	MRVSFQGMSTKAQAVLEGFRSLPRDEQYAVYETIARSVTPGDYGPLSDDDLTAIAAQTFSLLDEEESRAQSR
Ga0316628_1012487141	3300033513	Soil	GMSTKAQAVLEGFRSLPRDEQYTVYEMIARSMAPGDYGPLSDDDLTAIAAQTFSLLDEEESRAQSR
Ga0334810_170937_10_186	3300033890	Soil	VLEGFRSLPRDEQYAVYETIARSVTPGDYGPLSDDDLTVIAAQTFSLLDEEESRAQSR
Ga0370484_0226491_103_300	3300034125	Untreated Peat Soil	MSTKAQTVLEGFRSLPRDEQYAVYETIARSVTPGDYGRLSDDDLTAIAAQTFSLLDEEESRAQSR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F058102

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences