Metagenome / Metatranscriptome Family F058051

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F058051
Family Type	Metagenome / Metatranscriptome
Number of Sequences	135
Average Sequence Length	65 residues
Representative Sequence	MAIEAMQTNHELETLRIVRPQEQPRRKRSRLVSIAILMLLLTVLGAASYVIYAKTIGRSPTVQT
Number of Associated Samples	122
Number of Associated Scaffolds	135

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	95.52 %
% of genes near scaffold ends (potentially truncated)	94.81 %
% of genes from short scaffolds (< 2000 bps)	91.85 %
Associated GOLD sequencing projects	113
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (98.519 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (24.444 % of family members)
Environment Ontology (ENVO)	Unclassified (28.148 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.667 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.09% β-sheet: 0.00% Coil/Unstructured: 48.91%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 135 Family Scaffolds
PF02687	FtsX	74.07
PF12704	MacB_PCD	19.26
PF07883	Cupin_2	0.74
PF13518	HTH_28	0.74
PF13533	Biotin_lipoyl_2	0.74
PF00005	ABC_tran	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.52 %
Unclassified	root	N/A	1.48 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.52 %
Unclassified	root	N/A	1.48 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.52 %
Unclassified	root	N/A	1.48 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	80.74 %
Unclassified	root	N/A	1.48 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	79.26 %
Unclassified	root	N/A	1.48 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.74 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	79.26 %
Unclassified	root	N/A	1.48 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.74 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	79.26 %
Unclassified	root	N/A	1.48 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	0.74 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	79.26 %
Unclassified	root	N/A	1.48 %
Bryobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter	0.74 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	79.26 %
Unclassified	root	N/A	1.48 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	0.74 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459005\|F1BAP7Q01DMX4P	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	502	Open in IMG/M
3300002557\|JGI25381J37097_1080493	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300002560\|JGI25383J37093_10154736	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300002886\|JGI25612J43240_1015639	All Organisms → cellular organisms → Bacteria	1123	Open in IMG/M
3300002908\|JGI25382J43887_10438631	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300002908\|JGI25382J43887_10444634	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	549	Open in IMG/M
3300002910\|JGI25615J43890_1030727	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300002912\|JGI25386J43895_10062030	All Organisms → cellular organisms → Bacteria	1042	Open in IMG/M
3300002914\|JGI25617J43924_10207212	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300002916\|JGI25389J43894_1024499	All Organisms → cellular organisms → Bacteria	1044	Open in IMG/M
3300002917\|JGI25616J43925_10186097	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300004281\|Ga0066397_10100320	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	606	Open in IMG/M
3300004633\|Ga0066395_10482776	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	711	Open in IMG/M
3300005174\|Ga0066680_10561996	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	716	Open in IMG/M
3300005186\|Ga0066676_10493088	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	831	Open in IMG/M
3300005436\|Ga0070713_101133157	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	756	Open in IMG/M
3300005439\|Ga0070711_101498050	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	588	Open in IMG/M
3300005445\|Ga0070708_100514201	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1129	Open in IMG/M
3300005447\|Ga0066689_10608805	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300005466\|Ga0070685_10600438	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	792	Open in IMG/M
3300005468\|Ga0070707_100093545	All Organisms → cellular organisms → Bacteria	2910	Open in IMG/M
3300005471\|Ga0070698_100314776	Not Available	1496	Open in IMG/M
3300005526\|Ga0073909_10579707	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	552	Open in IMG/M
3300005586\|Ga0066691_10446069	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300005586\|Ga0066691_10632068	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300005764\|Ga0066903_107051175	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	582	Open in IMG/M
3300005983\|Ga0081540_1038898	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	2500	Open in IMG/M
3300006047\|Ga0075024_100314069	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	772	Open in IMG/M
3300006755\|Ga0079222_11422474	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	643	Open in IMG/M
3300006755\|Ga0079222_11675042	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300006806\|Ga0079220_11332218	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	604	Open in IMG/M
3300006852\|Ga0075433_11320694	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300006854\|Ga0075425_103156214	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	501	Open in IMG/M
3300006871\|Ga0075434_100311869	All Organisms → cellular organisms → Bacteria	1593	Open in IMG/M
3300006880\|Ga0075429_100932707	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	759	Open in IMG/M
3300006904\|Ga0075424_100479948	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1327	Open in IMG/M
3300006904\|Ga0075424_102227111	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300007255\|Ga0099791_10088757	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1415	Open in IMG/M
3300009012\|Ga0066710_100915979	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1350	Open in IMG/M
3300009012\|Ga0066710_100957836	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1319	Open in IMG/M
3300009012\|Ga0066710_104265950	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	534	Open in IMG/M
3300009038\|Ga0099829_10640377	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	884	Open in IMG/M
3300009137\|Ga0066709_102615180	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	676	Open in IMG/M
3300009137\|Ga0066709_103225898	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	594	Open in IMG/M
3300009545\|Ga0105237_11985104	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	590	Open in IMG/M
3300010336\|Ga0134071_10371986	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	725	Open in IMG/M
3300010359\|Ga0126376_12902244	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	529	Open in IMG/M
3300010373\|Ga0134128_12198153	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	608	Open in IMG/M
3300010400\|Ga0134122_12573615	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	559	Open in IMG/M
3300010401\|Ga0134121_11267394	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	741	Open in IMG/M
3300011271\|Ga0137393_10620119	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	927	Open in IMG/M
3300011271\|Ga0137393_11161333	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	656	Open in IMG/M
3300012189\|Ga0137388_11578409	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	592	Open in IMG/M
3300012199\|Ga0137383_10784279	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	696	Open in IMG/M
3300012205\|Ga0137362_10156267	All Organisms → cellular organisms → Bacteria	1952	Open in IMG/M
3300012205\|Ga0137362_10311542	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1363	Open in IMG/M
3300012211\|Ga0137377_10177220	All Organisms → cellular organisms → Bacteria	2046	Open in IMG/M
3300012351\|Ga0137386_10239202	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1305	Open in IMG/M
3300012353\|Ga0137367_10860617	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	626	Open in IMG/M
3300012354\|Ga0137366_10870718	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	636	Open in IMG/M
3300012355\|Ga0137369_10354085	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1071	Open in IMG/M
3300012357\|Ga0137384_10306513	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1320	Open in IMG/M
3300012363\|Ga0137390_11202888	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	705	Open in IMG/M
3300012402\|Ga0134059_1080418	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1464	Open in IMG/M
3300012410\|Ga0134060_1325560	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	622	Open in IMG/M
3300012582\|Ga0137358_10749057	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	652	Open in IMG/M
3300012685\|Ga0137397_10417836	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	999	Open in IMG/M
3300012882\|Ga0157304_1005521	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1261	Open in IMG/M
3300012891\|Ga0157305_10068172	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	808	Open in IMG/M
3300012896\|Ga0157303_10021331	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1101	Open in IMG/M
3300012901\|Ga0157288_10132963	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	721	Open in IMG/M
3300012908\|Ga0157286_10369454	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	547	Open in IMG/M
3300012914\|Ga0157297_10408103	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	546	Open in IMG/M
3300012923\|Ga0137359_11689497	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	520	Open in IMG/M
3300012925\|Ga0137419_10351511	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1140	Open in IMG/M
3300012927\|Ga0137416_12176765	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	510	Open in IMG/M
3300012951\|Ga0164300_10125266	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1167	Open in IMG/M
3300012971\|Ga0126369_12124891	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	649	Open in IMG/M
3300012985\|Ga0164308_10012716	All Organisms → cellular organisms → Bacteria → Proteobacteria	4654	Open in IMG/M
3300014157\|Ga0134078_10513686	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	559	Open in IMG/M
3300015054\|Ga0137420_1146040	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1001	Open in IMG/M
3300016319\|Ga0182033_12164630	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	508	Open in IMG/M
3300016404\|Ga0182037_11083902	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	700	Open in IMG/M
3300016404\|Ga0182037_11961607	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	525	Open in IMG/M
3300018468\|Ga0066662_12586212	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	536	Open in IMG/M
3300019789\|Ga0137408_1200198	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	710	Open in IMG/M
3300019789\|Ga0137408_1214750	All Organisms → cellular organisms → Bacteria	2254	Open in IMG/M
3300020140\|Ga0179590_1047858	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1095	Open in IMG/M
3300020170\|Ga0179594_10350452	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	560	Open in IMG/M
3300020199\|Ga0179592_10095780	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1362	Open in IMG/M
3300021403\|Ga0210397_10823223	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	717	Open in IMG/M
3300022899\|Ga0247795_1049436	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	705	Open in IMG/M
3300024330\|Ga0137417_1333909	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1326	Open in IMG/M
3300024347\|Ga0179591_1134687	All Organisms → cellular organisms → Bacteria → Proteobacteria	3136	Open in IMG/M
3300024347\|Ga0179591_1217018	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4873	Open in IMG/M
3300025911\|Ga0207654_10576607	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	801	Open in IMG/M
3300025916\|Ga0207663_10192482	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1465	Open in IMG/M
3300025927\|Ga0207687_11342240	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	615	Open in IMG/M
3300025928\|Ga0207700_10681380	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	917	Open in IMG/M
3300025933\|Ga0207706_10119039	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2322	Open in IMG/M
3300025936\|Ga0207670_11192499	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	644	Open in IMG/M
3300025942\|Ga0207689_11233915	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	629	Open in IMG/M
3300026277\|Ga0209350_1039630	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1384	Open in IMG/M
3300026285\|Ga0209438_1181292	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	556	Open in IMG/M
3300026320\|Ga0209131_1369125	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	534	Open in IMG/M
3300026326\|Ga0209801_1237709	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	703	Open in IMG/M
3300026555\|Ga0179593_1074357	All Organisms → cellular organisms → Bacteria	3534	Open in IMG/M
3300026792\|Ga0207499_101246	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	776	Open in IMG/M
3300026816\|Ga0207509_104788	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	674	Open in IMG/M
3300027371\|Ga0209418_1011855	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1379	Open in IMG/M
3300027402\|Ga0207465_102528	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	516	Open in IMG/M
3300027512\|Ga0209179_1094662	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	664	Open in IMG/M
3300027643\|Ga0209076_1060879	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1072	Open in IMG/M
3300027821\|Ga0209811_10044390	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1505	Open in IMG/M
3300027846\|Ga0209180_10643952	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	582	Open in IMG/M
3300027880\|Ga0209481_10408585	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	697	Open in IMG/M
3300028381\|Ga0268264_11829538	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	617	Open in IMG/M
3300028792\|Ga0307504_10126119	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	845	Open in IMG/M
3300030923\|Ga0138296_1874536	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	870	Open in IMG/M
3300030939\|Ga0138303_1196051	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	973	Open in IMG/M
3300030966\|Ga0075383_11340027	All Organisms → cellular organisms → Bacteria	1754	Open in IMG/M
3300030974\|Ga0075371_11901545	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	670	Open in IMG/M
3300030979\|Ga0068589_11446153	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1597	Open in IMG/M
3300031538\|Ga0310888_10719079	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	614	Open in IMG/M
3300031708\|Ga0310686_110355149	All Organisms → cellular organisms → Bacteria	2367	Open in IMG/M
3300031716\|Ga0310813_10614092	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	963	Open in IMG/M
3300031719\|Ga0306917_10705244	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	793	Open in IMG/M
3300031748\|Ga0318492_10673241	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	554	Open in IMG/M
3300031768\|Ga0318509_10495285	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	683	Open in IMG/M
3300031846\|Ga0318512_10636289	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	545	Open in IMG/M
3300031943\|Ga0310885_10787051	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	539	Open in IMG/M
3300031945\|Ga0310913_10604055	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	778	Open in IMG/M
3300031945\|Ga0310913_10900469	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	622	Open in IMG/M
3300032180\|Ga0307471_102380100	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	669	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.89%
Host-Associated	Host-Associated	11.11%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.15%
Plants	Host-Associated → Plants	11.11%
Aquatic	Environmental → Aquatic	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.15%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.15%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.96%
Sediment	Environmental → Aquatic → Sediment	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.52%
Loam	Environmental → Terrestrial → Soil → Loam	9.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.41%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.74%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.74%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	19.26%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.41%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.67%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.19%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.96%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	24.44%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	14.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.15%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.19%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.44%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.22%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.22%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.22%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.48%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.48%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.48%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.48%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.74%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.74%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.74%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.74%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.74%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002886	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002910	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300002916	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012402	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012410	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012882	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2	Environmental	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300022899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S016-104C-6	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026792	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A3-12 (SPAdes)	Environmental	Open in IMG/M
3300026816	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-SCHO21-B (SPAdes)	Environmental	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027402	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A3-12 (SPAdes)	Environmental	Open in IMG/M
3300027512	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)	Environmental	Open in IMG/M
3300027617	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300030923	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300030939	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A9_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300030966	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB4 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030974	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA8 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030979	Forest soil microbial communities from France, for metatranscriptomics studies - Site 11 - Champenoux / Amance forest (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E41_07477510	2170459005	Grass Soil	MAIEAMQTNHELETLRIVRPQEQPRRKRSRLVSIAILMLLLTVLGAASYVIYA
JGI25381J37097_10804931	3300002557	Grasslands Soil	MAIEAMQTNHELETLRIVRPQEQPRRKRSRLVSIAILMLLLTVXGAASYVIYAKTIGRSPTVQTMMVVAR
JGI25383J37093_101547362	3300002560	Grasslands Soil	MAIEATTRNHELETLRIERPQEQPRRKRSRLISIAMVMVLATVLGAAGYVIYAKTIGQPPTVQTMMIVARTDRK
JGI25612J43240_10156392	3300002886	Grasslands Soil	MAIEATTRNHELETLRIERPQEQPRRKRSRLISIAMLMVLATVLGAAGYVI
JGI25382J43887_104386312	3300002908	Grasslands Soil	MAFEAPRTNHELETLRIERPQEQPRRKRSPLISIAMLMVLATVLGAAGYLIYARTIGRPPAVQTMMIVAR
JGI25382J43887_104446341	3300002908	Grasslands Soil	MSIEATRTNHELETLRIERPQEQPRRKRSRLVSIAIVMLLTTVLGAVSYLIYAKTIGRSPTVQTMMVMAR
JGI25615J43890_10307272	3300002910	Grasslands Soil	MAIEAMQTNHELETLRIERPQEQPRRKRSRLVSIAILMLLLTVLGAASYVIYAK
JGI25386J43895_100620301	3300002912	Grasslands Soil	MAIEAMQTNHELETLRIVRPQEQPRRKRSRLVSIAILMLLLTVLGAASYVIY
JGI25617J43924_102072122	3300002914	Grasslands Soil	MAVAATRTNHELETLRIKRPQEQPRRKRSRLVSIAILMLLTTVLGAASYVIYAKTIGQ
JGI25389J43894_10244991	3300002916	Grasslands Soil	MAIEAMQTNHELETLRIVRPQEQPRRKRSRLVSIAILMLLLTVLGAASYVIYAKTIGRSPTVQTMMVVARTDRQSS
JGI25616J43925_101860972	3300002917	Grasslands Soil	MAIEATTRNHELETLRIERPQEQPRRKRSRLISIAMVMVLATVLGAAGYVIYAKTIGQPPTVQTMMIVARTDGKSSV
Ga0066397_101003202	3300004281	Tropical Forest Soil	MALEATRTNHDLETLRIERPQEHPQRKRSRLGSMAILMLLTTVLGAAGYVMYAKTIGRPPTVDTMMVVARTDRQSRVLLTGSG
Ga0066395_104827762	3300004633	Tropical Forest Soil	MAIEAMQTNHELETLRIVRPQEQPRRKRSRLVSIAILMLLTTVLGAASYVIYAKTIGRSPTVQTMMVV
Ga0066680_105619962	3300005174	Soil	MSIEATRTNHELETLRIERPQEQPRRKRSRLVSIAIVMLLLTVLGAASYVIYAKTIGRSPTVQTMMVVARTDRQS
Ga0066676_104930882	3300005186	Soil	MAVAAMPTNHELETLRIERPQEQPRRKRSRLVSIAILMLLTTVLGAASYVIYAKTIGRSPTVQTMM
Ga0070713_1011331572	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MAIEAMQTNHELETLRIVRPQEQPRRKRSRLVSIAILMLLLTVLGAASYVIYAKTIGRSPTVQTMMVVARTDRQSSVLLTGS
Ga0070711_1014980502	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MAIEAMQTNHELETLRIVRPQEQPRRKRSRLVSIAILMLLLTVLGAASYVIYAKTIGRSPTVQTMMVVARTDRQSSV
Ga0070708_1005142011	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LTIEATRTNHELETLRIERPAEQPRRKRSRLVSIAILMLLTTVLGAAGYVMYAKTIGRSP
Ga0066689_106088052	3300005447	Soil	MAIEANRTNHDLETLRIERPQERPRRKRSRLVSIAMLMLLATVLGAVGYVIYTKTIGRSP
Ga0070685_106004381	3300005466	Switchgrass Rhizosphere	MAIEAMQTNHELETLRIVRPQEQPRRKRSRLVSIAILMSLLTVFGAASYVIYAK
Ga0070707_1000935454	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MSIEATTRNHELETLRIERPQEQPRRKRSRLISIAMVMVLATVLGAAGYVIYAKTIG
Ga0070698_1003147761	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MAVAATRTNHELETLRIKRPQEQPRRKRSRLVSIAILMLLTTVLGAASYVIYAKTIGQSPTVQTMMVVARTDSQSSELLAGSGYIVTRHKY
Ga0073909_105797072	3300005526	Surface Soil	MAIEAMQTNHELETLRIVRPQEQPRRKRSRLVSIAILMLLLTVLGAASYVIYAK
Ga0066691_104460691	3300005586	Soil	MAIEATTRNHELETLRIERPQEQPRRKRSRLISIAMLMVLATVLGAAGYVMYAKTIGRPPTVQTMMIVARRDGQPSVLLTG
Ga0066691_106320682	3300005586	Soil	MAFEAPRTNHELETLRIERPREQPRRKRRPLISIAMLMVLATVLGAAGY
Ga0066903_1070511751	3300005764	Tropical Forest Soil	MAIEAMRTNHELETLRIERPQEQPQRKRSRLVSIAILMLLTTVLGAAGYVMYAKTIGRSPTVQTMMVVARTDR
Ga0081540_10388981	3300005983	Tabebuia Heterophylla Rhizosphere	MAIEAMQTNHELETLRIVRPQEQPRRKRSRLVSIAILMLLLTVLGAASYVVYAKTI
Ga0075024_1003140692	3300006047	Watersheds	MRTNHELETLRIERPQEQPQRKRSRLVSIATLMLLTTVLGAAGYVSYAKTIGRSP
Ga0079222_114224741	3300006755	Agricultural Soil	MAIEAMQTNHELETLRIVRPQEQPRRKRSRLVSIAILMLLTTVLGAASYVIYAKTIGQSPTVQTMMVVARTDSQSSELLAGSGYIVTRHKYVTI
Ga0079222_116750421	3300006755	Agricultural Soil	MAVAAMPTNHELETLRIERPQEQPRRKRSRLVSIAILILLTIVLGAASYAIYARTIGRSPTVQTMMVVARTDHQSSVLL
Ga0079220_113322181	3300006806	Agricultural Soil	MAIEAMQTNHELETLRIVRSQEQPRRKRSRLVSIAILISLLTVLGAASYVIYAKTIGRSPTVQTMMVV
Ga0075433_113206942	3300006852	Populus Rhizosphere	MALEATRANHELDTLRIERPQERSQRKRSRLVSSAILMVLTTVVGAAGYVSYAKTIGRAPTV
Ga0075425_1031562142	3300006854	Populus Rhizosphere	MAIEATTRNHELETLRIERPQERPRRKRSRLISIAMLMVLATVLGAAGYLIYAKTIG
Ga0075434_1003118691	3300006871	Populus Rhizosphere	MAIEATRTNHDLETLRIARPQEQPRRKRSRLVSIAILMLLTPVLGAAGYVMYAKTIGRSPTVQTMMVV
Ga0075429_1009327072	3300006880	Populus Rhizosphere	MALEATRTNHDLETLRIARPQEHPQRKRSRVVSMAILMVLTTVLGAAGYVMYAKTIGRGSIR*
Ga0075424_1004799481	3300006904	Populus Rhizosphere	MSIEATRTNHELETLRIERPQKRPRRKRGRLISITMLVVLATVFGAASYVIYAKT
Ga0075424_1022271111	3300006904	Populus Rhizosphere	MAIEATTRNHELETLRIERPQEQPRRKRSRLISIAMLMVLATVLGAAGYLIYAKTIGQPPTVQTMMIV
Ga0099791_100887571	3300007255	Vadose Zone Soil	MAIEATTRNHELETLRIERPQEQPRRKRSRLISIAMVMVLATVLGAAGYVIYA
Ga0066710_1009159791	3300009012	Grasslands Soil	MSIEATRTNHELETLRIERPQEQPRRKRSRLVSIAIVMLLTTVLGAASYVIYARTIGQPP
Ga0066710_1009578361	3300009012	Grasslands Soil	MAFEAPRTNHELERLRIERPREQPRRKRSRLVSIAIVMLLTTVLGAASYVIYARTIGQPP
Ga0066710_1042659501	3300009012	Grasslands Soil	MAIAATRTNHELETLRIERPQEQPRRKRSRVVSIAILMLLTTVLGAASYVIYAKTVGRPQTVQTIM
Ga0099829_106403772	3300009038	Vadose Zone Soil	MAIEATRTNHDLETLRIERPQEQPQRKRSRLVSIAILMLLTTVLGAAGYVMYAKTIGR
Ga0066709_1026151801	3300009137	Grasslands Soil	MAFEAPRTNHELETLRIERPTEQPRRKRSQFVLIAFLMLLATVFGVASYVIYAKTIGRSPTVQTMMVVAKTDQQASILFTGS
Ga0066709_1032258982	3300009137	Grasslands Soil	MAIEATTRNHELETLRIERPQEQPRRKRSRLISIAMVMVLATVLGAAGYVIYAKTIGQPPTVQ
Ga0105237_119851043	3300009545	Corn Rhizosphere	MSIEATRTNHELETLRIERPQEQPRRKRSRLVSIAILLLLTTVLGAASYV
Ga0134071_103719861	3300010336	Grasslands Soil	MAVAAMPTNHELETLRIERPQEQPRRKRSRLVSIAIVMLLTTVLGAVSYLIYAKTI
Ga0126376_129022442	3300010359	Tropical Forest Soil	MALEATQTNHELETLRIERPQEHPQRKRSRLVSIAILLLLTTVLGAAGYVMYAKTIGRSPTVQTMMVVAR
Ga0134128_121981531	3300010373	Terrestrial Soil	MAIAAMRTNHELETLRIERPQEQPRRKRSRLVSIAILLLLTTVLGAASYVIYG
Ga0134122_125736151	3300010400	Terrestrial Soil	MAIEATTRNHELETLRIERPQERPRRKRSRLIAIAMLMVLATVLGAAGYVIYAKTIGRPPTVQTMMIVART
Ga0134121_112673942	3300010401	Terrestrial Soil	MAIEAMQTNHELETLRIVRPQEQPRRKRSRLVSIAILMLPLTVLGAAS
Ga0137393_106201192	3300011271	Vadose Zone Soil	MAIEANRTNHDLETLRIERPQERPRRKRSRLVSIAMLMLLATVLGAAGYVIYAKTIGRPPTVQTM
Ga0137393_111613332	3300011271	Vadose Zone Soil	MSIEATRTNHELETLRIERPQEQPRRKRSRLVSIAIVMLLTTVLGAASYVIYARTIG
Ga0137388_115784091	3300012189	Vadose Zone Soil	MAIEATRTNHDLETLRIARPQEQPQRKRSRLVSMAILMLLTTVLGAAGYVMYAKTIGRSPTVQTMMVVARTDRQ
Ga0137383_107842792	3300012199	Vadose Zone Soil	MAVAATRTNHELETLRIKRPQEQPRRKRSRLVSIAILMLLTTVLGAASYVIYAKTIGQSPTVQTMMVVARTDSQSSELLAGSGYIV
Ga0137362_101562671	3300012205	Vadose Zone Soil	VETTTTNLDLETLRIERAPERPRRKRGRLISIAMLMVLATILGAAGYVIYARTIGRPPTVQTMMIVARTDGRSSVLLTGSG
Ga0137362_103115422	3300012205	Vadose Zone Soil	MSIEATRTNHELETLRIERPQEQPRRKRSRLVSIAIVMLLTTVLGAVSYLIYAKTIGRSPTVQTMMVMARTD
Ga0137377_101772201	3300012211	Vadose Zone Soil	MSIEATRTNHELETLRIERPQEQPRRKRSRLVSIAIVMLLTTVLGAVSYLIYAKTIGQPPTVQTMMVMARTDRQSSVLLTGSVYIVTRHK*
Ga0137386_102392021	3300012351	Vadose Zone Soil	MVIEANRRNHDLETLRIERPQEHPQRKRSRLVSMAILLLLTTVLGAAGYV
Ga0137367_108606172	3300012353	Vadose Zone Soil	MAIEATTRNHELETLRIERPQEQPRRKRSRLISIAIVMVLATVLGAAGYVIYT
Ga0137366_108707182	3300012354	Vadose Zone Soil	MAIEAMQTNHELETLRIVRPQEQPRRKRSRLVSIAILMLLLTVLGAASYVIYAKTIGRSPTVQTMMVVARTD
Ga0137369_103540851	3300012355	Vadose Zone Soil	MAIEAMQTNHELETLRIVRPQEQPRRKRSRLVSIAILMLLLTVLGAASYVIYAKTI
Ga0137384_103065132	3300012357	Vadose Zone Soil	MSIEATRTNHELETLRIERPQEQPRRKRSRLVSISILMLVTAVLGAASYVI
Ga0137390_112028882	3300012363	Vadose Zone Soil	MAIEAMQTNHELETLRIVRPQEQPRRKRSRLVSIAILMLLLTVLGAASYVIYAKTVGRS
Ga0134059_10804181	3300012402	Grasslands Soil	MAIEATRTNHDLETLRIARPQEQPRRKRSRLVSMAILLLLTTVLGAAGYVMYAKTIGRSPTVQTMLIVARTDRQSR
Ga0134060_13255601	3300012410	Grasslands Soil	MAIEATTRNHELETLRIERPQEQPRRKRSRLISIAMLMVLAAILVAAGYVIYAKTIGRPPTVQTMMIVARRDGQPSVLLTG
Ga0137358_107490572	3300012582	Vadose Zone Soil	MSIEATRTNHELETLRIERPQEQPRRKRSRLVSIAIVMLLTTVLGAVSYLIYAK
Ga0137397_104178361	3300012685	Vadose Zone Soil	MSIEATRTNHELETLRIERPQEQPRRKRSRLVSIAIVMLLTTVLGAVSYLIYAKTI
Ga0157304_10055212	3300012882	Soil	MAIAAMRTNHELETLRIERPQEQPRRRRSRLISIAILLLLTTVLGAASYVIYAKTIGRSPTVQTMMV
Ga0157305_100681721	3300012891	Soil	MAIAAMRTNHELETLRIERPQEQPRRKRSRLVSIAILMLLTTGLGAASYVIYGRTIGRSPTVQTMMVV
Ga0157303_100213311	3300012896	Soil	MAVAAMPTNHELETLRIERPQEQPRRKRNRLLSIAILLLLTTVLGAASYVIYGRT
Ga0157288_101329632	3300012901	Soil	MAIAAMRTNHELETLRIERPQEQPRRKRNRLLSIAILLLLTTVLGAASYVIYGRTIGPSPTVQTMMVVARTDR
Ga0157286_103694542	3300012908	Soil	MAIAAMRTNHELETLRIERPQEQPRRKRSRLVSIAILMLLLTVLGAASYVIYAKTIGRS
Ga0157297_104081032	3300012914	Soil	MAIEAMQTNHELETLRIERPQEQPRRKRSRLVSIAILLLLTTVLGAASYVIYAK
Ga0137359_116894972	3300012923	Vadose Zone Soil	MAVAAMPTNHELETLRIERPQEQPRRKRSRLVSIAILILLTIVLGAASYAIYARTIGRSPTVQTMMVVARTDHQSSVLLTG
Ga0137419_103515112	3300012925	Vadose Zone Soil	MALEATRTNHDLETLRIARPQEQPRRKRSRLVSMAILMVLTTVLGAAGYVMYAKTIGRSPTV
Ga0137416_121767651	3300012927	Vadose Zone Soil	MAIEANRTNHDLETLRIERPQERPRRKRSRLVSIAMLMLLATVLGAVGYV
Ga0164300_101252662	3300012951	Soil	MAIAAMRTNHELETLRIVRPQEQPRRKRSRLLSIAILMLLLTVLGAASYVIYVKTIGQ
Ga0126369_121248912	3300012971	Tropical Forest Soil	MAIEAMRTNHELETLRIERPQEQPRRKRNRLVSIAILMLLTTVLGAASYVIYARTIGRPPTVQTMMVVARTDRRPSVLLTGSDYIVTRH
Ga0164308_100127166	3300012985	Soil	MAIEAMQTNHELETLRIVRPQEQPRRKRSRLVSIAILMVLATVLGAAGYVIYAKTIGRSPTVQ
Ga0134078_105136861	3300014157	Grasslands Soil	MAIEATTRNHELETLRIERPQEQPRRKRSRLISIAMVMVLATVLGAAGYVIYAKTIGQPPTVQT
Ga0137420_11460402	3300015054	Vadose Zone Soil	MALEATRTNLELATLRIERPQEQPRRKRSRLVSLSILLLLTAVLGAASYVIYAKTLGRPQTVQTIM
Ga0182033_121646302	3300016319	Soil	MAIEATRTNHDLETLRIARPQEQPRRKRSRLVSIAILMSLLTVLGAASYVIYAKTIGRSPTVQTMMVVAR
Ga0182037_110839022	3300016404	Soil	MALEATQTNHELETLRIARPQEQPQRKRRWLVSSAILMVLTTVLGAAGYVMYAKTIGRSPTVQTMMVVARTDRQSRV
Ga0182037_119616071	3300016404	Soil	MAIEATRTNHELETLRIERPQEHPQRKRSHLVSMAILMLLTTVLGAAGYVMYAKTIGRSPTVQTMMVVARTDRQSRV
Ga0066662_125862121	3300018468	Grasslands Soil	MAIEAMQTNHELETLRIVRPQEQPRRKRSRLVSIAILMLLLTVLGAASYVIYAKTIGRSPTVQTMMVVARTDRQSSVLLT
Ga0137408_12001981	3300019789	Vadose Zone Soil	MSIEATRTNHELETLRIERPQEQPRRKRSRLVSIAIVMLLTTVLGAVSYLIYAKTIGRSPTVQTMMVMARTDRQSS
Ga0137408_12147501	3300019789	Vadose Zone Soil	MAIEAMQTNHELETLRIVRPQEQPRRKRSRLVSIAILMLLLTVLGAASYVIYAKTIGRSPTVQTMMVVA
Ga0179590_10478582	3300020140	Vadose Zone Soil	MAIEAMQTNHELETLRIVRPQEQPRRKRSRLVSIAILMLLLTVLGAASYVIYAKTIGRSPTVQTMMVVARTDRQS
Ga0179594_103504522	3300020170	Vadose Zone Soil	LTVETTTTNLDLETLRIERAPERPRRKRGRLISIAMLMVLATILGAAGY
Ga0179592_100957801	3300020199	Vadose Zone Soil	MAIEATTRNHELETLRIERPQEQPRRKRSRLISIAMLMVLATVLGAAGYVIYARTI
Ga0210397_108232231	3300021403	Soil	MAIEAMRTNHELETLRIERPQEQPRRKRSRSVSIAILMLLTTVLGAVSYVIYAKTIGRSPTVQTMMVVAKTDRQSSVLLTGS
Ga0247795_10494362	3300022899	Soil	MAIEAMQTNHELETLRIVRPQEQPRRKRTRLVSIAILMLLLTILGAASYVIYAK
Ga0137417_13339091	3300024330	Vadose Zone Soil	MAIEAMQTNHELETLRIMRPQEQPRRKRSRLVSIAILMLLLTVLGAASYVIYAKTIAGRP
Ga0179591_11346877	3300024347	Vadose Zone Soil	MAIEATTRNHELETLRIERPQEQPRRKRSRLISIAMLMVLAAILVAAGYVIYAKTIGRPPTVQTMMIVAMTDGKSSVLLT
Ga0179591_12170181	3300024347	Vadose Zone Soil	MAIEAMQTNHELETLRIVRPQEQPRRKRSRFGFNCDPDVAPNSSLAASYVIYAKTVGRSPKCKR
Ga0207654_105766073	3300025911	Corn Rhizosphere	MAIEAMRTTHELATLRIERPQEQPRRKRSRSVSIAILMLLTTVLGAVSYVIYAKTIGRSPTVQTMMVVAKT
Ga0207663_101924821	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MAIEAMQTNHELETLRIVRPQEQPRRKRSRLVSIAILMLLLTVLGTASYVIYAKT
Ga0207687_113422401	3300025927	Miscanthus Rhizosphere	MAIEAMQTNHELETLRIVRPQEQPRRKRSRLVSIAILMLLLTVLGAASYVIYAKTIGRSPTVQT
Ga0207700_106813801	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MAIEAMQTNHELETLRIVRPQEQPRRKRSRLVSIAILMLLLTVLGAASYVIYAKTIGRSP
Ga0207706_101190393	3300025933	Corn Rhizosphere	MAIEAMQTNHELETLRIVRPQEQPRRKRSRLVSIAILMLLLTVLGTASYVIYAKTI
Ga0207670_111924992	3300025936	Switchgrass Rhizosphere	MAIAAMRTNHELETLRIERPQEQPRRKRSRLVSIAILMLLLTVLGAASYVIYAKTIGRSPTVQTMMVVARTD
Ga0207689_112339151	3300025942	Miscanthus Rhizosphere	MAIEAMRTTHELATLRIERPQEQPRRKRSRLVSIAILLLLTTVLGVASYVIYGRTIGRSPIVQTM
Ga0209350_10396302	3300026277	Grasslands Soil	MAIEAMQTNHELETLRIVRPQEQPRRKRSRLVSIAILMLLLTVLGAASYVIYAKTIGRSPTVQTMMVVAR
Ga0209438_11812921	3300026285	Grasslands Soil	MAIEATTRNHELETLRIERPQEQPRRKRSRLISIAMVMVLATVLGAAGYVIYAKTIGQPPTVQTMMIVARTDGKSSVLL
Ga0209131_13691251	3300026320	Grasslands Soil	MRTNHELETLRIERPQEQPRRKRSRSVSIAILMLLTTVLGAVSYVIYTKTIGRSPTVQTMMVVARGD
Ga0209801_12377092	3300026326	Soil	MSIEATRTNHELETLRIERPQEQPRRKRSRLVSIAIVILLTTVLGAVSYLIYAKTIGRSPTVQTMMIVARTDGKSSVLL
Ga0179593_10743574	3300026555	Vadose Zone Soil	MAIEATTRNHELETLRIERPQEQPRRKRSRLISIAMVMVLATVLGRQAMSFMPR
Ga0207499_1012461	3300026792	Soil	MAIEAMQTNHELETLRIVRPQEQPRRKRSRLVSIAILMLLLTVLGAASYVIYAKTIG
Ga0207509_1047882	3300026816	Soil	MAIEAMQTNHELETLRIERPQEQPRRKRSRLVSIAILLLLTTVLGAASYVIYAKTIGRSPTVQTMMVVARTDHQS
Ga0209418_10118552	3300027371	Forest Soil	MAIEAMQTNHELETLRIERPQEQPRRKRSRLVSIAILTLLLSVLGAAGYVIYAKTIG
Ga0207465_1025282	3300027402	Soil	MAIEAMQTNHELETLRIVRPQEQPRRKRSRLVSIAILMLLLTVLGAASYV
Ga0209179_10946621	3300027512	Vadose Zone Soil	MAIEAMQTNHELETLRIVRPQEQPRRKRSRLVSIAILMLLLTVLGAASYVIYAKTIGRSPTVQTMMVVARTDRQSTV
Ga0210002_10122631	3300027617	Arabidopsis Thaliana Rhizosphere	MAVAAMPTNHELETLRIERPQEQPRRKHSRLVSIAILILLTIFLGAAS
Ga0209076_10608791	3300027643	Vadose Zone Soil	MAIEAMQTNHELETLRIVRPQEQPRRKRSRLVSIAILMLLLTVLGAASYVIYAKT
Ga0209811_100443903	3300027821	Surface Soil	MAIEAMQTNHELETLRIVRPQEQPRRKRSRLVSIAILMLLLTVLGAASYVIYAKTVGR
Ga0209180_106439521	3300027846	Vadose Zone Soil	MAIEATTRNHELETLRIERPQEQPRRKRSRLISIAMVMVLATVLGAAGYVIYAKT
Ga0209481_104085851	3300027880	Populus Rhizosphere	MAIEAMRTNHALETLRIERPQEQPQRKRSRLVSMAILMVLTTVLGAAGYVMYAKTIGRSPTVQTMMVVARTD
Ga0268264_118295382	3300028381	Switchgrass Rhizosphere	MAIEAMQTNHELETLRIERPQEQPRRKRSRLVSIAILMLLLTVLGAASYVIYAKTVGRSPTV
Ga0307504_101261192	3300028792	Soil	MAIAAMRTNHELETLRIERPQEQPRHRRSRLISIAILLLLTTVLGAASYVIYAK
Ga0138296_18745361	3300030923	Soil	MAIEAMQTNHELETLRIVRPQEQPRRKRSRLVSIAILMLLLTVLGAASYVIYARTVGRSPTVQT
Ga0138303_11960511	3300030939	Soil	MAIEAMQTNHELETLRIVRPQEQPRRKRSRLVSIAILMLLATVVGAASYG
Ga0075383_113400273	3300030966	Soil	MAIEAMQTNHELETLRIVRPQEQPRRKRSRLVSIAILMLLLTVLGAASYVIYAKTIGRSPTVQTMMVV
Ga0075371_119015451	3300030974	Soil	MAIEAMQTNHELETLRIVRPQEQPRRKRSRLVSIAILMLLLTVLGAASYVIYAKTVGRSP
Ga0068589_114461533	3300030979	Soil	MAIEAMQTNHELETLRIVRPQEQPRRKRSRLVPIAILMLLLTVLGAASYVIYAKT
Ga0310888_107190791	3300031538	Soil	MAIEAMQTNHELETLRIVRPQEQPRRKRSRLVSIAILMLLLTVLGAASYVIYAKTIGRSPTV
Ga0310686_1103551493	3300031708	Soil	MRTNHELETLRIERPQEQPRRKRSRSVSIAILMLLTTVLGAVSYVIYAKTIGRSPTVQTMMVVAR
Ga0310813_106140922	3300031716	Soil	MAIEAMQTNHELETLRIVRPQEQPRRKRSRLVSIAILMLLLTVLGAASYVMYAK
Ga0306917_107052442	3300031719	Soil	MAIEAMRTNHELETLRIERPQEQPRRKRSRSVSIAILMLLTTVSGAVSYVIYAKTIGRSPQCKR
Ga0318492_106732411	3300031748	Soil	MAIEAMQTNHELETLRIVRPQEQPRRKRSRLVSIAILMLLLTVLGAASYVIYAKTIGRSPTVQTMM
Ga0318509_104952852	3300031768	Soil	MAIEAMQTNHELETLRIVRPQEQPRRKRSRLVSIAILMLLLTVLGAASYVIYAKTIGRSPTVQTMMAVARTDR
Ga0318512_106362892	3300031846	Soil	MAIEAMRTNHELETLRIERPQEQPRRKRRRLVSIAILMLLTTVLGAASYVIYAKTIGRSPTVQTMMVVARTDRQSS
Ga0310885_107870511	3300031943	Soil	MAIEAMQTNHELETLRIVRPQEQPRRKRSRLVSIAILMLLLTVLGAVSYVIY
Ga0310913_106040552	3300031945	Soil	MAIAATRTNHELETLRIERPQEHPQRKRSRLGSMAILMLLTTVLGAAGYVIYAKTIGRSPTVQTMMVVARTDRQASVLGTDCGRTHRGGAAHQSW
Ga0310913_109004692	3300031945	Soil	MALEATQTNHELETLRIARPQEQPQRKRRWLVSSAILMVLTTVLGAAGYVMYAKTIGRSPTVQTM
Ga0307471_1023801002	3300032180	Hardwood Forest Soil	LTVETTTTNLDLETLRIERPPERPWRKRGRLISIAMLMVLATVLGAAAYVIYAKTIGRPPTVQTMMIVARTDGRSSVLL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F058051

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences