Metagenome / Metatranscriptome Family F058042

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F058042
Family Type	Metagenome / Metatranscriptome
Number of Sequences	135
Average Sequence Length	83 residues
Representative Sequence	KVGTVTAFNPGLRPVEPPSPIVVQSSPDTKPVSYMLGKRVRFVDKDGGAFDPHLVRPGTRVKLGFDRRGRVSRVVVVERE
Number of Associated Samples	100
Number of Associated Scaffolds	135

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	11.45 %
% of genes near scaffold ends (potentially truncated)	71.11 %
% of genes from short scaffolds (< 2000 bps)	81.48 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.78

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.296 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (23.704 % of family members)
Environment Ontology (ENVO)	Unclassified (47.407 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (63.704 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 2.78% β-sheet: 34.26% Coil/Unstructured: 62.96%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.78
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.78
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SCOP family	SCOP domain	Representative PDB	TM-score
b.40.4.7: Nucleic acid-binding proteins	d1je5a_	1je5	0.73
b.40.4.7: Nucleic acid-binding proteins	d1je5a_	1je5	0.73
b.40.4.0: Nucleic acid-binding proteins	d6nrza1	6nrz	0.69
b.40.4.0: Nucleic acid-binding proteins	d6nrza1	6nrz	0.69
b.40.4.0: Nucleic acid-binding proteins	d6hcwa1	6hcw	0.65
b.40.4.0: Nucleic acid-binding proteins	d6hcwa1	6hcw	0.65
b.40.4.0: Nucleic acid-binding proteins	d3nema1	3nem	0.64
b.40.4.0: Nucleic acid-binding proteins	d6ildb1	6ild	0.64
b.40.4.0: Nucleic acid-binding proteins	d3nema1	3nem	0.64
b.40.4.0: Nucleic acid-binding proteins	d6ildb1	6ild	0.64

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 135 Family Scaffolds
PF00202	Aminotran_3	23.70
PF12127	FloA	2.22
PF02156	Glyco_hydro_26	0.74
PF02518	HATPase_c	0.74
PF01471	PG_binding_1	0.74
PF02321	OEP	0.74
PF08308	PEGA	0.74
PF02769	AIRS_C	0.74
PF08447	PAS_3	0.74
PF13193	AMP-binding_C	0.74
PF00271	Helicase_C	0.74
PF13884	Peptidase_S74	0.74
PF13231	PMT_2	0.74
PF00486	Trans_reg_C	0.74
PF12079	DUF3558	0.74
PF02801	Ketoacyl-synt_C	0.74
PF07957	DUF3294	0.74

COG ID	Name	Functional Category	% Frequency in 135 Family Scaffolds
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.48
COG4124	Beta-mannanase	Carbohydrate transport and metabolism [G]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.30 %
Unclassified	root	N/A	3.70 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.30 %
Unclassified	root	N/A	3.70 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.30 %
Unclassified	root	N/A	3.70 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	88.15 %
Unclassified	root	N/A	3.70 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.48 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	88.15 %
Unclassified	root	N/A	3.70 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	68.15 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	4.44 %
Unclassified	root	N/A	3.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	68.15 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	4.44 %
Unclassified	root	N/A	3.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	68.15 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	3.70 %
Unclassified	root	N/A	3.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	68.15 %
Unclassified	root	N/A	3.70 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	2.96 %
Chthoniobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter	0.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	68.15 %
Unclassified	root	N/A	3.70 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2.96 %
Chthoniobacter flavus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	0.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459005\|F1BAP7Q01A5C56	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	520	Open in IMG/M
2170459023\|GZGNO2B02FJPWK	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	527	Open in IMG/M
3300004114\|Ga0062593_100019417	Not Available	3540	Open in IMG/M
3300004156\|Ga0062589_101499843	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	663	Open in IMG/M
3300004479\|Ga0062595_100184309	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1268	Open in IMG/M
3300004479\|Ga0062595_101734384	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	590	Open in IMG/M
3300005166\|Ga0066674_10419641	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	617	Open in IMG/M
3300005175\|Ga0066673_10016547	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3306	Open in IMG/M
3300005175\|Ga0066673_10175718	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1207	Open in IMG/M
3300005179\|Ga0066684_10024183	All Organisms → cellular organisms → Bacteria	3211	Open in IMG/M
3300005179\|Ga0066684_10147534	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1489	Open in IMG/M
3300005181\|Ga0066678_10075772	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1982	Open in IMG/M
3300005181\|Ga0066678_10976395	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	550	Open in IMG/M
3300005187\|Ga0066675_10030836	All Organisms → cellular organisms → Bacteria	3143	Open in IMG/M
3300005187\|Ga0066675_11309875	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	534	Open in IMG/M
3300005187\|Ga0066675_11374132	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	518	Open in IMG/M
3300005332\|Ga0066388_100759432	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1568	Open in IMG/M
3300005332\|Ga0066388_100777721	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1553	Open in IMG/M
3300005332\|Ga0066388_104290570	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	727	Open in IMG/M
3300005332\|Ga0066388_106935930	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300005435\|Ga0070714_101058311	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	790	Open in IMG/M
3300005436\|Ga0070713_101925475	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	573	Open in IMG/M
3300005446\|Ga0066686_10102964	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1841	Open in IMG/M
3300005447\|Ga0066689_10576453	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	710	Open in IMG/M
3300005454\|Ga0066687_10349661	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	847	Open in IMG/M
3300005468\|Ga0070707_100120171	All Organisms → cellular organisms → Bacteria	2551	Open in IMG/M
3300005526\|Ga0073909_10562751	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	559	Open in IMG/M
3300005546\|Ga0070696_101153349	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	653	Open in IMG/M
3300005552\|Ga0066701_10581012	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	685	Open in IMG/M
3300005553\|Ga0066695_10209446	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1224	Open in IMG/M
3300005553\|Ga0066695_10800946	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	544	Open in IMG/M
3300005568\|Ga0066703_10848066	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	521	Open in IMG/M
3300005569\|Ga0066705_10047608	All Organisms → cellular organisms → Bacteria	2394	Open in IMG/M
3300005574\|Ga0066694_10401740	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	644	Open in IMG/M
3300005586\|Ga0066691_10842016	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	540	Open in IMG/M
3300005764\|Ga0066903_104384783	All Organisms → cellular organisms → Bacteria → Acidobacteria	754	Open in IMG/M
3300006028\|Ga0070717_10015258	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	5929	Open in IMG/M
3300006046\|Ga0066652_101439720	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	643	Open in IMG/M
3300006046\|Ga0066652_101892235	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	536	Open in IMG/M
3300006791\|Ga0066653_10088013	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1387	Open in IMG/M
3300009012\|Ga0066710_100680344	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1567	Open in IMG/M
3300009012\|Ga0066710_103193135	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	630	Open in IMG/M
3300009012\|Ga0066710_103929010	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	557	Open in IMG/M
3300009012\|Ga0066710_104008174	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	551	Open in IMG/M
3300009137\|Ga0066709_102522926	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	692	Open in IMG/M
3300009137\|Ga0066709_104155100	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	527	Open in IMG/M
3300009143\|Ga0099792_10461716	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	788	Open in IMG/M
3300010048\|Ga0126373_12008838	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	641	Open in IMG/M
3300010301\|Ga0134070_10045706	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1471	Open in IMG/M
3300010320\|Ga0134109_10157073	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	822	Open in IMG/M
3300010323\|Ga0134086_10012718	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2616	Open in IMG/M
3300010325\|Ga0134064_10068438	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1118	Open in IMG/M
3300010337\|Ga0134062_10513535	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	604	Open in IMG/M
3300010337\|Ga0134062_10741922	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	520	Open in IMG/M
3300010358\|Ga0126370_10220914	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1448	Open in IMG/M
3300010358\|Ga0126370_11424361	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	655	Open in IMG/M
3300010360\|Ga0126372_10051758	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2788	Open in IMG/M
3300010376\|Ga0126381_101728854	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	903	Open in IMG/M
3300011270\|Ga0137391_10385934	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1199	Open in IMG/M
3300012198\|Ga0137364_10004077	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	7650	Open in IMG/M
3300012198\|Ga0137364_11404028	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	517	Open in IMG/M
3300012199\|Ga0137383_10352819	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1077	Open in IMG/M
3300012199\|Ga0137383_10942903	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	630	Open in IMG/M
3300012201\|Ga0137365_10733196	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	722	Open in IMG/M
3300012202\|Ga0137363_10011763	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	5616	Open in IMG/M
3300012203\|Ga0137399_11703524	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	519	Open in IMG/M
3300012205\|Ga0137362_10393852	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1200	Open in IMG/M
3300012206\|Ga0137380_11346593	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	599	Open in IMG/M
3300012206\|Ga0137380_11769483	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	501	Open in IMG/M
3300012207\|Ga0137381_10764919	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300012207\|Ga0137381_11405801	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	590	Open in IMG/M
3300012208\|Ga0137376_10456572	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300012208\|Ga0137376_10764665	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	832	Open in IMG/M
3300012208\|Ga0137376_11059644	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	694	Open in IMG/M
3300012209\|Ga0137379_11018619	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	733	Open in IMG/M
3300012210\|Ga0137378_10069028	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	3206	Open in IMG/M
3300012285\|Ga0137370_10712679	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	623	Open in IMG/M
3300012349\|Ga0137387_10218359	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1371	Open in IMG/M
3300012349\|Ga0137387_11037377	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	587	Open in IMG/M
3300012351\|Ga0137386_10763562	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	694	Open in IMG/M
3300012353\|Ga0137367_10589014	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	779	Open in IMG/M
3300012356\|Ga0137371_10283150	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1292	Open in IMG/M
3300012362\|Ga0137361_10571512	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1037	Open in IMG/M
3300012582\|Ga0137358_10110312	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1866	Open in IMG/M
3300012685\|Ga0137397_10317420	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1161	Open in IMG/M
3300012917\|Ga0137395_10332972	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1079	Open in IMG/M
3300012958\|Ga0164299_11372287	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	544	Open in IMG/M
3300012975\|Ga0134110_10030449	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2106	Open in IMG/M
3300012977\|Ga0134087_10739409	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	526	Open in IMG/M
3300013296\|Ga0157374_10991772	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	859	Open in IMG/M
3300014150\|Ga0134081_10190859	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	692	Open in IMG/M
3300014154\|Ga0134075_10193872	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	873	Open in IMG/M
3300014154\|Ga0134075_10418881	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	593	Open in IMG/M
3300015264\|Ga0137403_11591967	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	507	Open in IMG/M
3300015356\|Ga0134073_10277178	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	589	Open in IMG/M
3300015358\|Ga0134089_10129334	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	985	Open in IMG/M
3300015358\|Ga0134089_10322329	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	646	Open in IMG/M
3300017654\|Ga0134069_1142682	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	798	Open in IMG/M
3300018431\|Ga0066655_10027784	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2721	Open in IMG/M
3300018433\|Ga0066667_10020716	All Organisms → cellular organisms → Bacteria	3491	Open in IMG/M
3300018433\|Ga0066667_10187413	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1506	Open in IMG/M
3300018433\|Ga0066667_10938098	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	745	Open in IMG/M
3300018433\|Ga0066667_11540062	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	589	Open in IMG/M
3300018433\|Ga0066667_12020857	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	530	Open in IMG/M
3300018468\|Ga0066662_11010292	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	824	Open in IMG/M
3300018482\|Ga0066669_10543160	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1012	Open in IMG/M
3300019882\|Ga0193713_1000087	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	26506	Open in IMG/M
3300020006\|Ga0193735_1009003	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3156	Open in IMG/M
3300020022\|Ga0193733_1201635	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	511	Open in IMG/M
3300021344\|Ga0193719_10183427	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	897	Open in IMG/M
3300024222\|Ga0247691_1010554	All Organisms → cellular organisms → Bacteria	1521	Open in IMG/M
3300025922\|Ga0207646_10434812	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1184	Open in IMG/M
3300026306\|Ga0209468_1115639	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	815	Open in IMG/M
3300026306\|Ga0209468_1205169	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	501	Open in IMG/M
3300026308\|Ga0209265_1028099	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1742	Open in IMG/M
3300026310\|Ga0209239_1081836	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1394	Open in IMG/M
3300026316\|Ga0209155_1022643	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2616	Open in IMG/M
3300026328\|Ga0209802_1308471	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	523	Open in IMG/M
3300026330\|Ga0209473_1079947	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1381	Open in IMG/M
3300026330\|Ga0209473_1210977	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	725	Open in IMG/M
3300026498\|Ga0257156_1004211	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2651	Open in IMG/M
3300026514\|Ga0257168_1097766	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	653	Open in IMG/M
3300026537\|Ga0209157_1085667	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1534	Open in IMG/M
3300026540\|Ga0209376_1017570	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	4878	Open in IMG/M
3300026547\|Ga0209156_10069559	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1809	Open in IMG/M
3300027748\|Ga0209689_1016872	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	4621	Open in IMG/M
3300030844\|Ga0075377_11648716	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	551	Open in IMG/M
3300031720\|Ga0307469_11964751	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	567	Open in IMG/M
3300031942\|Ga0310916_11693277	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	511	Open in IMG/M
3300032180\|Ga0307471_100825369	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1094	Open in IMG/M
3300032180\|Ga0307471_102392174	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	667	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.26%
Host-Associated	Host-Associated	0.74%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.26%
Plants	Host-Associated → Plants	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.26%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	88.15%
Loam	Environmental → Terrestrial → Soil → Loam	11.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	44.44%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	34.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.19%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.70%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.22%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	23.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	22.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	11.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	11.11%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.70%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.22%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.96%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.74%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.74%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
2170459023	Grass soil microbial communities from Rothamsted Park, UK - FA3 (control condition)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300024222	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK32	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300030844	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E41_07297970	2170459005	Grass Soil	KVGTVTAFNPGLRPVEPPSPIVVQSSPDTKPVSYMLGKRVRFVDKDGGAFDPHLVRPGTRVKLGFDRRGRVSRVVVVERE
FA3_08730900	2170459023	Grass Soil	EHTGQFVRAPTQITTGAVKVGTVTAFNPGLRPVEPPSPIVVQSSPDTKPVSYMLGKRVRFGHKDGRAVSPGLVRPGTRVQLGFDRRGRVTRVTVVGNE
Ga0062593_1000194172	3300004114	Soil	MTTGAVAVGTVTAFTPGKTTVTPPSPIVVQSSPDTKPMSYVLGRKVRYVAKDGKAIDPHMIRAGTRVHLDFDRRGAVKRVVVYEKQ*
Ga0062589_1014998431	3300004156	Soil	GTVTAFTPGKTTVTPPSPIVVQSSPDTKPMSYVLGRKVRYVAKDGKAIDPHMIRAGTRVHLDFDRRGAVKRVVVYEKQ*
Ga0062595_1001843093	3300004479	Soil	ITTGAVLIGTVIAFNAGQRPIEAPSPIVVQSSPDTKPVSYMLGRRVRFVDKDRRAIDPHLVRPGTRVHLDFDRKGAVKRVVVVEK*
Ga0062595_1017343842	3300004479	Soil	GAVLIGTVIAFNAGQKPIEAPSPIVVQSSPDTKPVSYMLGKKVRYADKDGRAIDPHLVRPGTRVQLGFDRRGRVARVIVVQR*
Ga0066674_104196411	3300005166	Soil	ITTGAVKIGTVMAFNPGQRPIEAASPIVVQSSPDTKPVSYMLGKKVRFVDKDGRAVDPRLVRPGTRVQLGFDRRGRVARVTVVEKG*
Ga0066673_100165471	3300005175	Soil	ITTGAVKVGTVTAFNPGLRPVEPPSPIVVQSSPDTKPVSYMLGKRVRFVDKDGRAIDPHLVRAGTRVELGFDRRHKVSLVVVVERE*
Ga0066673_101757184	3300005175	Soil	ITTGAVKVGTVTAFNPGLRPVEPPSPIVVQSSPDTKPVSYMLGKRVRFVDKDGGAFDPHLVRPGTRVKLGFDRRGRVSLVVVVERE*
Ga0066684_100241833	3300005179	Soil	MIGTVTAFNAGTRPIEPPSPIVVQSSPDAKPVSYMLAKKVRYGDKDGRAIDPHLIRPGTRVSLGFDRRGRVARVIVVERE*
Ga0066684_101475344	3300005179	Soil	RPVEPPSPIVVQSSPDTKPVSYMLGKRVRFVDKDGGAFDPHLVRPGTRVKLGFDRRGRVSLVVVVERE*
Ga0066678_100757726	3300005181	Soil	APTQITTGAVKVGTVTAFNPGLRPVDPPSPIVVQSSPDTKPVSYILGKRVRFVYKDGRAIDPHLVRAGTRVELGFDRRHKVSLVVVVERE*
Ga0066678_109763951	3300005181	Soil	PQTTVTPPSPIVVQSSPDAKAMSYVLARKVRYVDKDGRAIDPHLIRAGTRVHLDFDRRGAVKRVLVVERE*
Ga0066675_100308362	3300005187	Soil	MIGTVTAFNAGTRPIEPPSPIVVQSSPDAKPVSYMLAKKVRYGDKDGRAIDPHLIRPGTRVSLGFDRRGRVARIIVVERE*
Ga0066675_113098752	3300005187	Soil	KIGTVTAFNPGQRPIESASPIVVQSSPNVKPVSYMLGKRVRFVDKDGRAVDPHMVRPGTRVELGFDRRGRVARVTVVEKT*
Ga0066675_113741321	3300005187	Soil	VSHTGQTQKAPTQMTTGAVKIGTVTAFNAGVKPIEAPSPIVVQSSPDTKPVSYMLAKKVRYVDKDGRAIDPHLIRPGTRVSLGFDRKGRVARVTVVERE*
Ga0066388_1007594323	3300005332	Tropical Forest Soil	GTVTAFNAGLIPVEPPSPIVVQSSPDTRPVSYMLGKRVYFFDKDGMPIDPHLVRAGTRVQLGFDRRGRVSHVVVAWRG*
Ga0066388_1007777212	3300005332	Tropical Forest Soil	HTGQIQRAPTQMTTGAAKIGTVIAFNPGQTPIEAPSPIVVESSPDTKPVSYMLGKRVHFVDKEGRAVDPHLVRPGARVELGFDRRGRVARVTVVEKE*
Ga0066388_1042905702	3300005332	Tropical Forest Soil	AFNPGQRPIEPASPIVVQSSPNVKPVSYMLGKRVRFVDKDGRAVDPHMVRPGTRVELGFDRRGRVARVTVVEKT*
Ga0066388_1069359302	3300005332	Tropical Forest Soil	QRPIEPASPIVVQSSPDTRPVSYELGRRVRFVDKDGRAVDPSIWVRPGARVELGFDRRGRVARVTVVEKE*
Ga0070714_1010583112	3300005435	Agricultural Soil	QRPVEAASPIVVQSSPDTKPVSYVLGKKVRFIDKDGRAYDPHLVRPGTRVQLGFDRRGRVTRVIVVEKT*
Ga0070713_1019254751	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VVGTVTAFTPGQITTTPPSPLVVQSSPDAKPMSYMLGRRVRYVDKDGKAIDPHMIRPGTRVHLDFDRKGAVRRVVVVEKE*
Ga0066686_101029641	3300005446	Soil	MTTGAVMIGTVTAFNAGTRPIEPPSPIVVQSSPDAKPVSYMLAKKVRYGDKDGRAIDPHLIRPGTRVSLGFDRRGRVARVIVVERE*
Ga0066689_105764532	3300005447	Soil	AVAVGTVTAFTPPQTTVTPPSPIVVQSSPDAKAMSYVLARKVRYVDKDGRAIDPHLIRAGTRVHLDFDRRGAVKRVLVVERE*
Ga0066687_103496612	3300005454	Soil	QMSTEPNTIGTVVSFTPGQKIAVPSDSIVVQSSPNAKPMTYVLGKKVRYVDKDGKAIDPHMIRAGTRVHLDFDRRGVVKRVIVVEKE*
Ga0070707_1001201714	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MTTGAVAVGTVTAFTPGQTTVTAPSPIVVQSSPDTKPMSYVLARKVSYVDKDGRTISPRLIRPGTRVHLQFDRKGAVKRVMVVERE*
Ga0073909_105627511	3300005526	Surface Soil	GTVIAFNAGQKPIEAPSPIVVQSSPDTKPVSYMLGKKVRYADKDGRAIDPHLVRPGTRVQLGFDRRGRVARVTVVQR*
Ga0070696_1011533491	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VHAPTQITTGAVKVGTVTAFNPGQRNVEPPSPIVVQSSPDTKPVSYMLGKRVRFVDKDGRAFDPLMVRPGTRVQLGFDRRGRVSRVVVV
Ga0066701_105810122	3300005552	Soil	GVEHTGQVQKAPTQMTTGAVKIGTVMAFNAGQRPIEPASPIVVQSSPDTKPVSYELGKRVRFVDKDGRAVDPRMVRPGTRVELGFDRRGRVARVTVVQKG*
Ga0066695_102094462	3300005553	Soil	MTTGAVKIGTVTAFNAGVKPIEAPSPIVVQSSPDTKPVSYMLAKKVRYVDKDGRAIDPHLIRPGTRVSLGFDRKGRVARVTVVERE*
Ga0066695_108009462	3300005553	Soil	GQRPIEPASPIVVQSSPDTKPVSYMLGKKVRFVDKDGRAVDPRLVRPGTRVQLGFDRRGRVARVTVVEKG*
Ga0066703_108480661	3300005568	Soil	GTVTAFNPGLRPVEPPSPIVVQSSPDTKPVSYMLGKRVRFVDKDGGAFDPHLVRPGTRVKLGFDRRGRVSLVVVVERE*
Ga0066705_100476081	3300005569	Soil	GTVTAFNPGLRPVEPPSPIVVQSSPDTKPVSYMLGKRVRFVDKDGGAFDPHLVRPGTRVKLGFDRRGRVNLVVVVERE*
Ga0066694_104017402	3300005574	Soil	RAPTQITTGAVKVGTVTAFNPGLRPVEPPSPIVVQSSPDTKPVSYMLGKRVRFVDKDGGAFDPHLVRPGTRVKLGFDRRGRVSLVVVVERE*
Ga0066691_108420161	3300005586	Soil	KVGTVTAFNPGLRPVEPPSPIVVLSSPDTKPVSYMLGKRVRFVGKDGRAVDRHMVRAGTRVQLGFDRRGRVSRVVVVER*
Ga0066903_1043847832	3300005764	Tropical Forest Soil	VTAFNPGLENVEPPSPIVVQSSPDAKPVSYMLAKRVFLADKDGGVFDPHMVRPGTRVKLGFDRRGRVSAIIVVERE*
Ga0070717_100152581	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	TTTQMSSSTIAIGTVISFTPGKTVVVPSSPIVVQSSPDVRPMSYVLGRKVRYLDQAGKAIDPRKIQAGTRVHLDFDRAGAVKRVVVVEKG*
Ga0070717_100224075	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	TTTQMSSSTIAIGTVISFTPGKTVVVPSSPIVVQSSPDVRPVSYVLGRKVRYLDQAGKAIDPRKIQAGTRVHLDFDRAGAVKRVVVVEKG*
Ga0066652_1014397201	3300006046	Soil	TSGVQHTGQTQRAPTQMTTGAVMIGTVTAFNAGTRPIEPPSPIVVQSSPDAKPVSYMLAKKVRYGDKDGRAIDPHLIRPGTRVSLGFDRRGRVARVIVVERE*
Ga0066652_1018922351	3300006046	Soil	GTVTAFNPGQRPIESASPIVVQSSPNVRPVSYELGKRVRFVDKDGRAVDPHMVRPGTRVELGFDRRGRVARVTVVEKT*
Ga0066653_100880132	3300006791	Soil	VIAFNAGQRPIEAPSPIVVQSSPDTKPVSYMLGKKVRYADKDVRAIDPHLVRPGTRVQLGFDRRGRVARVTVVQR*
Ga0066710_1006803442	3300009012	Grasslands Soil	MIGTVTAFNAGTRPIEPPSPIVVQSSPDAKPVSYMLAKKVRYGDKDGRAIDPHLILPGTRVSLGFDRRGRVARVIVVERE
Ga0066710_1031931351	3300009012	Grasslands Soil	PTQITTGAVKVGTVTAFNPGLRPVDPPSPIVVQSSPDTKPVSYMLGKRVRFVDKDGRAIDPHLVRAGTRVELGFDRKHKVSLVVVVERE
Ga0066710_1039290101	3300009012	Grasslands Soil	GTVTAFNPGLRPVDPPSPIVVQSSPDTKPVSYILGKRVRFVYKDGRAIDPHLVRAGTRVELGFDRRHKVSLVVVVERE
Ga0066710_1040081741	3300009012	Grasslands Soil	EHTGQIQKAPTQITTGAVKIGTVMAFNPGQRPIEAASPIVVQSSPDTKPVSYMLGKKVRFVDKDGRAYDPHLVRPGTRVQLGFDRKGRVTRVTIVEKT
Ga0066709_1025229261	3300009137	Grasslands Soil	TGAVKVGTVTAFNPGLRPVDPPSPIVVQSSPDTKPVSYMLGKRVRFVYKDGRAIDPHLVRAGTRVELGFDRRHKVSLVVVVERE*
Ga0066709_1041551001	3300009137	Grasslands Soil	VTAFNPGLRPVEPPSPIVVQSSPDTKPVSYMLGKRVRFVYKDGRAIDPHLVRAGTRVELGFDRRGKVSLVVVVERD*
Ga0099792_104617161	3300009143	Vadose Zone Soil	MTTGAVTVGTVTAFTPGQITTTAPSPIVVQSSPDAKPISYVLGRKVRYVDKDGRAIDPHLIRAGTRVHLDFDRRGTVKRVLVVERE*
Ga0126373_120088381	3300010048	Tropical Forest Soil	MQHQITTGAVISGTVTAFNPGLRKVEPRPPIVVQSSADTEPVPYMLARQVLFEDKNGRAFSPRLVRPGTSVKLGF
Ga0134070_100457061	3300010301	Grasslands Soil	MTTGAVKIGTVTAFNAGVKPIEAPSPIVVQSSPDTKPVSYMLAKKVRYVDKDGRAIDPHLIRPGTRVSLGFDRRGRVARVIVVERE*
Ga0134109_101570731	3300010320	Grasslands Soil	MTTGAVMIGTVTAFNAGTRPIEPPSPIVVQSSPDAKPVSYMLAKKVRYGDKDGRAIDPHLIRPGTRVSLGFDRRGRVARIIVVERE*
Ga0134086_100127185	3300010323	Grasslands Soil	RAPTQITTGAVKVGTVTAFNPGLRPVDPPSPIVVQSSPDTKPVSYILGKRVRFVYKDGRAIDPHLVRAGTRVELGFDRRHKVSLVVVVERE*
Ga0134064_100684381	3300010325	Grasslands Soil	LRPVEPPSPIVVQSSPDTKPVSYMLGKRVRFVDKDGGAFDPRLVRPGTRVKLGFDRRGRVSLVVVVERE*
Ga0134062_105135351	3300010337	Grasslands Soil	MTTGTVAVGTVTAFTPPQTTVTPPSPIVVQSSPDAKAMSYVLARKVRYVDKDGRAIDPHLIRAGTRVHLDFDRRGAVKRVLVVERE*
Ga0134062_107419221	3300010337	Grasslands Soil	LRPVEPPSPIVVQSSPDTKPVSYILGKRVRFVDKDGRAIDPHLVRAGTRVELGFDRRHKVSLVVVVERE*
Ga0126370_102209141	3300010358	Tropical Forest Soil	APTQITTGAVRIGTVTAFNPGLRNVEAPSPIVVQSSPDTKPVSYMLGKRVRFVDKDGRAVDPHLVRPGTRVQLGFDRHGRVTRVLVVERE*
Ga0126370_114243611	3300010358	Tropical Forest Soil	FLHAPTQITTGSVIVGTVRAFNPGLRNVEPASPIVVQSSLDTKAVSYMLARKVRFVDQDGRAFDPHLIRPGARVHLGFDRRGRVSRITVVEKE*
Ga0126372_100517582	3300010360	Tropical Forest Soil	MTTGAVKIGTVIAFNPGQTPIEAPSPIVVESSPDTKPVSYMLGKRVHFVDKGGRAVDPHLVRPGARVELGFDRRGRVARVTVVEKE*
Ga0126381_1017288541	3300010376	Tropical Forest Soil	VDHTGQFLYAPTQMTTGGVILGTVSAFNPGLIPVEPPSPIVVQSSPDTRPVSYMLGKRVYFFDKDGMPIDPHLVRAGTRVQLGFDRRGRVSHVVVAWRG*
Ga0137391_103859343	3300011270	Vadose Zone Soil	MTTGAVPVGTVVSFTAGKTVVVPASPIVVQSSPDVRPVSYVLGRKVRYVDQTGKAIDPGKIRAGTRVHLDFDRARAVKRVVVVEKG
Ga0137364_100040771	3300012198	Vadose Zone Soil	AVGTVTAFTPPQTTVTPPSPIVVQSSPDAKPMSYVLGRKIRYVDKDGRAIDPHLIRAGTRVHLDFDRRGTVKRVLVVERE*
Ga0137364_114040281	3300012198	Vadose Zone Soil	TGAVKVGTVTAFNPGLRPVEPPSPIVVQSSPDTKPVSYMLGKRVRFVDKDGGAFDPHLVRPGTRVKLGFDRRGRVSLVVVVERE*
Ga0137383_103528191	3300012199	Vadose Zone Soil	MTTSPNAVGTVVSFTPGEKVVVPSSSIVVQSSPDAKPMTYVLGRKVRYVDKDGRAINPSLIRGGTRVQLEFDRAGAVKRVVVVERE*
Ga0137383_109429031	3300012199	Vadose Zone Soil	HTGQTLQAPTQITTGAVKVGTVTAFNPGLRPVDPPSPIVVQSSPDTKPVSYMLGKRVRFVDKDGRAIDPHLVRAGTRVELGFDRKHKVSLVVVVERE*
Ga0137365_101836142	3300012201	Vadose Zone Soil	MSTERNTIGTVVSFTPGQKVVVPSSSIVVQSSPDARPMTYVLGRKVRYVDRVGRPFDPRLIRGGTRVQLEFDRAGAVRRVIVVEKG*
Ga0137365_107331962	3300012201	Vadose Zone Soil	MTTSTTAVGTVITFTPGQTTVVPASPIVVQSSPEAKPMSYVLSRKVRYVDQAGKAVDPRLIRSGTRVHLDFDRTGKVKRVVVVE*
Ga0137363_100117632	3300012202	Vadose Zone Soil	MTTGAVTVGTVTAFTPGQITTTPPSPIVVQSSPDAKPISYVLGRKVRYVDKDGRAVDPHLIRAGTRVHLDFDRRGTVKRVLVVERE*
Ga0137399_117035241	3300012203	Vadose Zone Soil	PTQMTTGAVRIGSVTAFNPGLRNVEPPSPIVVLSSPDTKPVSYMLGKRVRFVGKDGRAVDRHMVRAGTRVQLGFDRRGRVSRVVVVER*
Ga0137362_103938524	3300012205	Vadose Zone Soil	NPGLRPVEPPSPIVVQSSPDTKPVSYMVGKRVRFVDKDGRAVDWHMVRAGARVQLGFDRRGRVSRVVVVERE*
Ga0137380_113465931	3300012206	Vadose Zone Soil	VKVGTVTAFNPGLRPVEPPSPIVVQSSPDTKPVSYMLGKRVRFVDKDGGAFDPHLVRPGTRVKLGFDRRGRVSLVVVVERE*
Ga0137380_117694831	3300012206	Vadose Zone Soil	VKVGTVTAFNPGLRPVEPPSPIVVQSSPDTKPVSYMLGKRVRFVGKDGRAVDRHMVRAGTRVQLGFDRRGRVSRVVVVER*
Ga0137381_107649192	3300012207	Vadose Zone Soil	VTAFTPGQTTVTPPSPIVVQSSPDAKPMSYVLGRKVRYVDKDGKAIDPHMIRAGTRVHLDFDRKGAVKRVVVVERE*
Ga0137381_114058012	3300012207	Vadose Zone Soil	TTAVGTVITFTPGQTTVVPPSPIVVQSSPEAKPMSYVLGRKVRYVDQAGKAVDPRLIRSGARVHLDFDRTGKVKRVVVVE*
Ga0137376_104565723	3300012208	Vadose Zone Soil	TVRAPTQISTGAVKVGTVTAFNPGLRPVEPPSPIVVQSSPDTKPVSYMLGKRVRFVDKDGGAFDPHLVRPGTRVKLGFDRRGRVSLVVVVERE*
Ga0137376_107646651	3300012208	Vadose Zone Soil	TVTAFTPGQITTTPPSPIVVQSSPDAKPISYVLGRKVRYVDKDGRAVDPHLIRAGTRVHLDFDRRGTVKRVLVVERE*
Ga0137376_110596441	3300012208	Vadose Zone Soil	MTTGAVAVGTVTAFTPPQTTVTPPSPIVVQSSPDAKPMSYVLGRKIRYVDKDGRAIDPHLIRAGTRVHLDFDRRGTVKRVLVVERE*
Ga0137379_110186192	3300012209	Vadose Zone Soil	MTTGAVTVGTVTAFTPGQITTTAPSPIVVQSSPDAKPISYVLGRKVRYVDKDGRAIDPHLLRAGTRVHLDFDRRGAVKRVLVVERE*
Ga0137378_100690286	3300012210	Vadose Zone Soil	PATTQMTTGAVAVGTVTAFTPPQTTVMPPSPIVVQSSPDAKAMSYVLARKVRYVDKDGRAIDPHLIRAGTRVHLDFDRRGAVKRVLVVERE*
Ga0137370_107126791	3300012285	Vadose Zone Soil	AFNPGLRPVEPPSPIVVQSSPDTKPVSYMLGKRVRFVDKDGRAIDPHLVRAGTRVELGFDRRHKVSLVVVVERE*
Ga0137387_102183593	3300012349	Vadose Zone Soil	GAVTVGTVTAFTPGQITTTAPSPIVVQSSPDARPISYVLGRKVRYVDKDGRAVDPHLIRAGTRVHLDFDRRGTVKRVLVVERE*
Ga0137387_110373772	3300012349	Vadose Zone Soil	GAVKIGTVIAFNPGLRPVEAPSPIVVQSSPDAKPVSYMLGRTVRFADKDGRAVDPHLVRPGTRVQLGFDRRGRVTRVVVVEKE*
Ga0137386_107635622	3300012351	Vadose Zone Soil	VTVGTVTAFTPGQITTTPPSPIVVQSSPDAKPISYVLGRKVRYVDKDGRAVDPHLIRAGTRVHLDFDRRGAVKRVLVVERE*
Ga0137367_105890142	3300012353	Vadose Zone Soil	MTTGAVAVGTVTAFTPPQTTVTPPSPIVVQSSPDAKAMSYVLARKVRYVDKDGRAIDPHLIRPGTRVHLDFDRRGTVKRVLVVERE*
Ga0137371_102831502	3300012356	Vadose Zone Soil	VRAPTQITTGAVKVGTVTAFNPGLRPVEPPSPIVVQSSPDTKPVSYMLGKRVRFVDKDGGAFDPHLVRPGTRVKLGFDRRGRVSLVVVVERE*
Ga0137361_105715122	3300012362	Vadose Zone Soil	LIGTVIAFNAGQRPIEAPSPIVVQSSPDTKPVSYMLGKKVRYADKDGRAIDPHLVRPGTRVQLGFDRRGRVARVTVVQR*
Ga0137358_101103121	3300012582	Vadose Zone Soil	MTTGAVLIGTVIAFNAGQRPIEASSPIVVQSSPDAKPVSYILGRRVLFIDKDQRAIDPHLVRPGTRVQLGFDRRGRVARVTVVQRG*
Ga0137397_103174201	3300012685	Vadose Zone Soil	MTTGAVRIGSVTAFNPGLRNVEPPSPIVVLSSPDTKPVSYMLAKRVRFVGKDGRAVDRHMVRAGTRVQLGFDRRGRVSRVVVVER*
Ga0137395_103329721	3300012917	Vadose Zone Soil	MTTGAVTVGTVTAFTPGQITTTAPSPIVVQSSPDAKPISYVLGRKVRYVDKDGRAIDPHLIRAGTRVHLDFDRKGAVKRVLVVERE*
Ga0137404_101504542	3300012929	Vadose Zone Soil	MSTSNTIGTVVSFTPGKAVVVPSSSIVVQSSPDVHPMTYVLGRKVRYVDQAGRAFDPRLIRGGTRVRLDFDRAGAVKRVIVVDKG*
Ga0164299_113722872	3300012958	Soil	FNAGQRPIEPASPIVVQSSPDTKPVSYVLGKKVRFVDKDGRAFDPHLVRPGTRVQLGFDHKGRVSRVTVVAKG*
Ga0134077_104626891	3300012972	Grasslands Soil	TTVTPPSPIVVQSSPDAKAMSYVLARKVRYVDKDGRAIDPHLIRAGTRVHLDFDRRGAVKRVLVVERE*
Ga0134110_100304491	3300012975	Grasslands Soil	TQITTGAVKVGTVTAFNPGLRPVDPPSPIVVQSSPDTKPVSYMLGKRVRFVDKDGRAIDPHLVRAGTRVELGFDRKHKVSLVVVVERE*
Ga0134087_107394091	3300012977	Grasslands Soil	QITTGAVKVGTVTAFNPGLRPVDPPSPIVVQSSPDTKPVSYMLGKRVRFVDKDGRAIDPHLVRAGTRVELGFDRKHKVSLVVVVERE*
Ga0157374_109917721	3300013296	Miscanthus Rhizosphere	TVIAFNAGQKPIEAPSPIVVQSSPDTKPVSYMLGKKVRYADKDGRAIDPHLVRPGTRVHLGFDRGGRVARVTVVQR*
Ga0134081_101908591	3300014150	Grasslands Soil	RPIEPASPIVVQSSPDTKPVSYMLGKKVRFVDKDGRAVDPHLVRPGTRVQLGFDRRGRVTRVTVVEKI*
Ga0134075_101938721	3300014154	Grasslands Soil	GQRPIEPASPIVVQSSPDTKPVSYMLGKKVRFVDKDGRAVDPHLVRPGTRVQLGFDRRGRVTRVTVVEKI*
Ga0134075_104188811	3300014154	Grasslands Soil	MTTGAVAVGTVTAFTPPQTTVTPPSPIVVQSSPDAKAMSYVLARKVRYVDKDGRAIDPHLIRAGTRVHLDFDRRGAVKRVLVVERE*
Ga0137403_115919672	3300015264	Vadose Zone Soil	AFNAGQRPIESASPIVVQSSPDTKPVSYMLGKKVRFVDKDGRAFDPHMVRPGTRVQLGFDRKGRVARVTIVEKG*
Ga0134073_102771781	3300015356	Grasslands Soil	PPQTTVTPPSPIVVQSSPDAKAMSYVLARKVRYVDKDGRAIDPHLIRAGTRVHLDFDRRGAVKRVLVVERE*
Ga0134089_101293341	3300015358	Grasslands Soil	ITTGAVKVGTVTAFNPGLRPVDPPSPIVVQSSPDTKPVSYMLGKRVRFVDKDGRAIDPHLVRAGTRVELGFDRRHKVSLVVVVERE*
Ga0134089_103223291	3300015358	Grasslands Soil	HTGQTQKAPTQMTTGAVKIGTVTAFNAGVKPIEAPSPIVVQSSPDTKPVSYMLAKKVRYVDKDGRAIDPHLIRPGTRVSLGFDRKGRVARVTVVERE*
Ga0134069_11426821	3300017654	Grasslands Soil	RAPTQITTGAVKVGTVTAFNPGLRPVDPPSPIVVQSSPDTKPVSYILGKRVRFVDKDGRAIDPHLVRAGTRVELGFDRRHKVSLVVVVERE
Ga0066655_100277843	3300018431	Grasslands Soil	MIGTVTAFNAGTRPIEPPSPIVVQSSPDAKPVSYMLAKKVRYGDKDGRAIDPHLIRPGTRVSLGFDRRGRVARVIVVERE
Ga0066667_100207163	3300018433	Grasslands Soil	MTTGAVKIGTVTAFNAGVKPIEAPSPIVVQSSPDTKPVSYMLAKKVRYVDKDGRAIDPHLIRPGTRVSLGFDRKGRVARVTVVERE
Ga0066667_101874134	3300018433	Grasslands Soil	AVGTVTAFTPPQTTVTPPSPIVVQSSPDAKAMSYVLARKVRYVDKDGRAIDPHLIRAGTRVHLDFDRRGAVKRVLVVERE
Ga0066667_109380981	3300018433	Grasslands Soil	IGTVTAFNPGQRPIESASPIVVQSSPNVRPVSYELGKRVRFVDKDGRAVDPHMVRPGTRVELGFDRRGRVARVTVVEKT
Ga0066667_115400621	3300018433	Grasslands Soil	GTVTAFNPGLRPVEPPSPIVVQSSPDTKPVSYMLGKRVRFVDKDGGAFDPHLVRPGTRVKLGFDRRGRVNLVVVVERE
Ga0066667_120208571	3300018433	Grasslands Soil	GTVTAFNPGLRPVEPPSPIVVQSSPDTKPVSYMLGKRVRFVYKDGRAIDPHLVRAGTRVELGFDRRGKVSLVVVVERD
Ga0066662_110102921	3300018468	Grasslands Soil	VKIGTVTAFNPGLRPIEPASPIVVQSSPNTKPVSYMLGKKVRFVDKDGRAVDPRMVRPGTRVELGFDRRGRVTRVTVVEKG
Ga0066669_105431602	3300018482	Grasslands Soil	MAPGAVKIGTVTAFNAGVKPIEAPSPIVVQSSPDTKPVSYMLAKKVRYVDKDGRAIDPHLIRPGTRVSLGFDRKGRVARVTVVERE
Ga0193713_100008720	3300019882	Soil	TQMSTGAVAVGTVTAFTPGQITTTAPSPIVVQSSPDTKPISYVLARKVRYVDKDGRAVDPRLIRAGTRVHLDFDRRGAVKRVLVVERE
Ga0193735_10090034	3300020006	Soil	MSTSRIAIGTVTAFTAGKTTVVPPSPIVVQSSPNVKPMSYVLGRKVRYVDKDGRGIDPHLIRPGTRVHLDFDRTGAVKRVVVVERE
Ga0193733_12016351	3300020022	Soil	APTQITTGAVKIGTVTAFNPGQRPIEATSPIVVQSSPDTKPVSYMLGKKVRFVDKDGRAFDPHMVRPGTRVQLGFDRKGRVARVTVVEKG
Ga0193719_101834272	3300021344	Soil	AVLIGTVIAFNAGQRPIEAPSPIVVQSSPDAKPVSYMLGRKVRFVDKDRRAIDPHLVRPGTRVQLGFDRRGRVARVTVVQRG
Ga0247691_10105542	3300024222	Soil	VLIGTVIAFNAGQKPIEAPSPIVVQSSPDTKPVSYMLGKKVRYADKDGRAIDPHLVRPGTRVHLGFDRGGRVARVTVVQR
Ga0207646_104348121	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTTGAVAVGTVTAFTPGQTTVTAPSPIVVQSSPDTKPMSYVLARKVSYVDKDGRTISPRLIRPGTRVHLQFDRKGAVKRVMVVERE
Ga0209468_11156392	3300026306	Soil	QVQKAPTQMTTGAAKIGTVTAFNPGQRPIESASPIVVQSSPNVKPVSYMLGKRVRFVDKDGRAVDPHMVRPGTRVELGFDRRGRVARVTVVEKT
Ga0209468_12051692	3300026306	Soil	ITQKAPTQITTGAVLIGTVIAFNAGQRPIEAPSPIVVQSSPDTKPVSYMLGKKVRYADKDGRAIDPHLVRPGTRVQLGFDRRGRVARVTVVQR
Ga0209265_10280992	3300026308	Soil	MTTGAVAVGTVTAFTPPQTTVTPPSPIVVQSSPDAKAMSYVLARKVRYVDKDGRAIDPHLIRAGTRVHLDFDRRGAVKRVLVVERE
Ga0209239_10818363	3300026310	Grasslands Soil	NPGLRPVEPPSPIVVQSSPDTKPVSYMLGKRVRFVGKDGRAVDRHMVRAGTRVQLGFDRRGRVSLVVVVER
Ga0209155_10226435	3300026316	Soil	QMTTGAVAVGTVTAFTPPQTTVTPPSPIVVQSSPDAKAMSYVLARKVRYVDKDGRAIDPHLIRAGTRVHLDFDRRGAVKRVLVVERE
Ga0209802_13084711	3300026328	Soil	TTGAVKIGTVTAFNAGVKPIEAPSPIVVQSSPDTKPVSYMLGKRVRFVGKDGRAVDRHMVRAGTRVQLGFDRRGRVSRVVVVER
Ga0209473_10799474	3300026330	Soil	PVEPPSPIVVQSSSDTKPVSYMLGKRVRFVDKDGGAFDPHLVRPGTRVKLGFDRRGRVSLVVVVERE
Ga0209473_12109772	3300026330	Soil	VLIGTVIAFNAGQRPIEAPSPIVVQSSPDTKPVSYMLGKKVRYADKDGRAIDPHLVRPGTRVQLGFDRRGRVARVTVVQR
Ga0257156_10042113	3300026498	Soil	MSTGAVAVGTVTAFTPGQITTTAPSPIVVQSSPDTKPISYVLARKVRYVDKDGRAVDPRLIRAGTRVHLDFDRRGAVKRVLVVERE
Ga0257168_10977661	3300026514	Soil	PTQITTGAVWIGTVTAFNPGRRNVEPPSPIVVQSSPDTKPVSYMLGKRVRFLDKDGRAFDPHMVRPGTRVQLGFDRKGRVSRVVVVGVTRR
Ga0209157_10856672	3300026537	Soil	MTTGAVKIGTVTAFNAGVKPIEAPSPIVVQSSPDTKPVSYMLAKKVRYVDKDGRAIDPHLIRPGTRVSLGFDRKGRVTRVTVVERE
Ga0209376_10175701	3300026540	Soil	PTEMTTGAVMIGTVTAFNAGTRPIEPPSPIVVQSSPDAKPVSYMLAKKVRYGDKDGRAIDPHLIRPGTRVSLGFDRRGRVARIIVVERE
Ga0209156_100695592	3300026547	Soil	MIGTVTAFNAGTRPIEPPSPIVVQSSPDAKPVSYMLAKKVRYGDKDGRAIDPHLIRPGTRVSLGFDRRGRVARIIVVERE
Ga0209689_10168724	3300027748	Soil	MTTGAVTVGTVTAFTPGQITTTAPSPIVVQSSPDAKPISYVLGRKVRYVDKDGRAIDPHLIRAGTRVHLDFDRRGAVKRVLVVERE
Ga0075377_116487162	3300030844	Soil	TVTAFTPGQITTTPPSPLVVQSSPDAKPMSYMLGRRVRYVDKDGKAIDPHMIRPGTRVHLDFDRKGAVRRVVVVEKE
Ga0307469_119647511	3300031720	Hardwood Forest Soil	KTQITTGAVKIGTVTAFNAGLRNVEPPSPIVVQSSPDTKPVSYMLGKRVRFTDKDGRAIDPHLVRPGTRVQLGFDRRGKVSRVVVVER
Ga0310916_116932772	3300031942	Soil	VTAFNPGQRPIESASPIVVQSSPNVRPVSYELGKRVRFVDKEGKAVDPRMVRPGTRVELGFDRRGRVARVTVVEKT
Ga0307471_1008253692	3300032180	Hardwood Forest Soil	MSSSKIAIGTVISFTPGKTVVVPSSPIVVQSSPDVRPMSYVLGRTVRYVDQAGKAIDPRMIRAGTRVHLNFDRAGAVKRVVVVGKG
Ga0307471_1023921741	3300032180	Hardwood Forest Soil	HTGQTLRAPTQITTGAVKVGMVTAFNPGLRPVEPPSPIVVQSSPDAKPMSYVLGRKVRYVAKDGKAIDPRMIRAGTRVHLDLDRRGAVKRVVVYERE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F058042

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences