Metagenome / Metatranscriptome Family F058025

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F058025
Family Type	Metagenome / Metatranscriptome
Number of Sequences	135
Average Sequence Length	66 residues
Representative Sequence	MTYGFVPNNWPAFQRELDARGLAMDDIEKVEIRPSADAPSATTIEVVVTARSGRVHTWRQDEAAPAD
Number of Associated Samples	106
Number of Associated Scaffolds	135

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	83.70 %
% of genes near scaffold ends (potentially truncated)	20.00 %
% of genes from short scaffolds (< 2000 bps)	65.93 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.63

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.556 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (20.000 % of family members)
Environment Ontology (ENVO)	Unclassified (40.741 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.556 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 14.74% β-sheet: 24.21% Coil/Unstructured: 61.05%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.63
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.63
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 135 Family Scaffolds
PF01370	Epimerase	27.41
PF16868	NMT1_3	16.30
PF12867	DinB_2	9.63
PF13404	HTH_AsnC-type	7.41
PF00903	Glyoxalase	5.93
PF02738	MoCoBD_1	2.96
PF05157	T2SSE_N	2.22
PF02720	DUF222	1.48
PF10101	DUF2339	1.48
PF13458	Peripla_BP_6	1.48
PF01037	AsnC_trans_reg	1.48
PF04392	ABC_sub_bind	0.74
PF13412	HTH_24	0.74
PF07973	tRNA_SAD	0.74
PF03588	Leu_Phe_trans	0.74
PF00158	Sigma54_activat	0.74
PF12681	Glyoxalase_2	0.74
PF12974	Phosphonate-bd	0.74
PF13378	MR_MLE_C	0.74
PF01841	Transglut_core	0.74

COG ID	Name	Functional Category	% Frequency in 135 Family Scaffolds
COG2360	Leu/Phe-tRNA-protein transferase	Posttranslational modification, protein turnover, chaperones [O]	0.74
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.56 %
Unclassified	root	N/A	4.44 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.56 %
Unclassified	root	N/A	4.44 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.56 %
Unclassified	root	N/A	4.44 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	32.59 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	11.11 %
Unclassified	root	N/A	4.44 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	32.59 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8.89 %
Unclassified	root	N/A	4.44 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	32.59 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4.44 %
Unclassified	root	N/A	4.44 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	32.59 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4.44 %
Unclassified	root	N/A	4.44 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	32.59 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4.44 %
Unclassified	root	N/A	4.44 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002558\|JGI25385J37094_10035813	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1730	Open in IMG/M
3300002560\|JGI25383J37093_10004404	All Organisms → cellular organisms → Bacteria	4375	Open in IMG/M
3300002908\|JGI25382J43887_10323501	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	663	Open in IMG/M
3300002908\|JGI25382J43887_10489720	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	520	Open in IMG/M
3300003203\|JGI25406J46586_10000997	All Organisms → cellular organisms → Bacteria	13278	Open in IMG/M
3300004268\|Ga0066398_10110649	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300005166\|Ga0066674_10006955	All Organisms → cellular organisms → Bacteria	4520	Open in IMG/M
3300005167\|Ga0066672_10116257	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1649	Open in IMG/M
3300005171\|Ga0066677_10019985	All Organisms → cellular organisms → Bacteria	3081	Open in IMG/M
3300005171\|Ga0066677_10085255	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1648	Open in IMG/M
3300005175\|Ga0066673_10035948	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2415	Open in IMG/M
3300005179\|Ga0066684_10012382	All Organisms → cellular organisms → Bacteria	4184	Open in IMG/M
3300005180\|Ga0066685_10360936	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1009	Open in IMG/M
3300005184\|Ga0066671_10695130	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	658	Open in IMG/M
3300005187\|Ga0066675_10013737	All Organisms → cellular organisms → Bacteria	4362	Open in IMG/M
3300005332\|Ga0066388_100089153	All Organisms → cellular organisms → Bacteria	3498	Open in IMG/M
3300005332\|Ga0066388_100155486	All Organisms → cellular organisms → Bacteria → Proteobacteria	2870	Open in IMG/M
3300005332\|Ga0066388_100198054	All Organisms → cellular organisms → Bacteria	2627	Open in IMG/M
3300005332\|Ga0066388_107121675	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	562	Open in IMG/M
3300005332\|Ga0066388_107997724	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	529	Open in IMG/M
3300005446\|Ga0066686_10349887	All Organisms → cellular organisms → Bacteria	1008	Open in IMG/M
3300005454\|Ga0066687_10285070	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300005468\|Ga0070707_100000940	All Organisms → cellular organisms → Bacteria	28929	Open in IMG/M
3300005518\|Ga0070699_101214132	Not Available	692	Open in IMG/M
3300005536\|Ga0070697_100333688	All Organisms → cellular organisms → Bacteria	1307	Open in IMG/M
3300005552\|Ga0066701_10013298	All Organisms → cellular organisms → Bacteria	3853	Open in IMG/M
3300005559\|Ga0066700_10264758	All Organisms → cellular organisms → Bacteria	1205	Open in IMG/M
3300005569\|Ga0066705_10576916	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	693	Open in IMG/M
3300005587\|Ga0066654_10047365	All Organisms → cellular organisms → Bacteria	1883	Open in IMG/M
3300005713\|Ga0066905_100622079	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300005764\|Ga0066903_106343137	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	617	Open in IMG/M
3300005937\|Ga0081455_10082981	All Organisms → cellular organisms → Bacteria	2620	Open in IMG/M
3300005985\|Ga0081539_10476145	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	517	Open in IMG/M
3300006049\|Ga0075417_10017721	All Organisms → cellular organisms → Bacteria	2792	Open in IMG/M
3300006049\|Ga0075417_10136125	All Organisms → cellular organisms → Bacteria	1136	Open in IMG/M
3300006049\|Ga0075417_10542545	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	587	Open in IMG/M
3300006794\|Ga0066658_10410707	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300006800\|Ga0066660_10422706	All Organisms → cellular organisms → Bacteria	1107	Open in IMG/M
3300006800\|Ga0066660_11491754	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	532	Open in IMG/M
3300006844\|Ga0075428_100002541	All Organisms → cellular organisms → Bacteria	19844	Open in IMG/M
3300006845\|Ga0075421_101236122	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300006854\|Ga0075425_103059066	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	510	Open in IMG/M
3300006904\|Ga0075424_102078905	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	599	Open in IMG/M
3300007076\|Ga0075435_100884109	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	779	Open in IMG/M
3300007255\|Ga0099791_10066113	All Organisms → cellular organisms → Bacteria	1634	Open in IMG/M
3300007255\|Ga0099791_10096795	All Organisms → cellular organisms → Bacteria	1356	Open in IMG/M
3300009012\|Ga0066710_100760986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1482	Open in IMG/M
3300009100\|Ga0075418_10095814	All Organisms → cellular organisms → Bacteria	3153	Open in IMG/M
3300009147\|Ga0114129_10001537	All Organisms → cellular organisms → Bacteria	31282	Open in IMG/M
3300009147\|Ga0114129_11440747	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	848	Open in IMG/M
3300009792\|Ga0126374_11724727	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	521	Open in IMG/M
3300009807\|Ga0105061_1034098	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300010046\|Ga0126384_10007400	All Organisms → cellular organisms → Bacteria	6746	Open in IMG/M
3300010047\|Ga0126382_12181962	Not Available	532	Open in IMG/M
3300010320\|Ga0134109_10100952	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1005	Open in IMG/M
3300010325\|Ga0134064_10118537	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300010336\|Ga0134071_10004262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5414	Open in IMG/M
3300010336\|Ga0134071_10192195	All Organisms → cellular organisms → Bacteria	1005	Open in IMG/M
3300010337\|Ga0134062_10225245	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300010358\|Ga0126370_12392894	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	524	Open in IMG/M
3300010359\|Ga0126376_10492903	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1132	Open in IMG/M
3300010360\|Ga0126372_10245233	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1532	Open in IMG/M
3300010360\|Ga0126372_10352105	All Organisms → cellular organisms → Bacteria	1321	Open in IMG/M
3300010364\|Ga0134066_10137957	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	752	Open in IMG/M
3300010391\|Ga0136847_11211450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	703	Open in IMG/M
3300012203\|Ga0137399_10103117	All Organisms → cellular organisms → Bacteria	2210	Open in IMG/M
3300012203\|Ga0137399_10462886	All Organisms → cellular organisms → Bacteria	1061	Open in IMG/M
3300012203\|Ga0137399_10809820	Not Available	789	Open in IMG/M
3300012203\|Ga0137399_11322254	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300012205\|Ga0137362_10595848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	953	Open in IMG/M
3300012356\|Ga0137371_11430472	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	506	Open in IMG/M
3300012410\|Ga0134060_1207964	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	576	Open in IMG/M
3300012582\|Ga0137358_10290516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1110	Open in IMG/M
3300012685\|Ga0137397_10564275	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300012685\|Ga0137397_10659224	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300012918\|Ga0137396_10301222	All Organisms → cellular organisms → Bacteria	1185	Open in IMG/M
3300012922\|Ga0137394_10012705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6623	Open in IMG/M
3300012922\|Ga0137394_11069071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	669	Open in IMG/M
3300012925\|Ga0137419_11627013	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300012929\|Ga0137404_10004328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9473	Open in IMG/M
3300012929\|Ga0137404_10484820	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1101	Open in IMG/M
3300012930\|Ga0137407_10199685	All Organisms → cellular organisms → Bacteria	1793	Open in IMG/M
3300012944\|Ga0137410_10498571	All Organisms → cellular organisms → Bacteria	995	Open in IMG/M
3300012944\|Ga0137410_10801600	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300012972\|Ga0134077_10016783	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2471	Open in IMG/M
3300012977\|Ga0134087_10158639	All Organisms → cellular organisms → Bacteria	989	Open in IMG/M
3300012977\|Ga0134087_10282174	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	772	Open in IMG/M
3300014154\|Ga0134075_10001673	All Organisms → cellular organisms → Bacteria	7666	Open in IMG/M
3300015245\|Ga0137409_10221668	All Organisms → cellular organisms → Bacteria	1693	Open in IMG/M
3300015371\|Ga0132258_10636962	All Organisms → cellular organisms → Bacteria	2680	Open in IMG/M
3300015373\|Ga0132257_103739049	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	554	Open in IMG/M
3300017656\|Ga0134112_10171082	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300017657\|Ga0134074_1131242	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300017659\|Ga0134083_10001826	All Organisms → cellular organisms → Bacteria	6309	Open in IMG/M
3300018431\|Ga0066655_10001308	All Organisms → cellular organisms → Bacteria	8907	Open in IMG/M
3300018433\|Ga0066667_10002970	All Organisms → cellular organisms → Bacteria	6876	Open in IMG/M
3300018433\|Ga0066667_10086735	All Organisms → cellular organisms → Bacteria	2036	Open in IMG/M
3300018482\|Ga0066669_10001658	All Organisms → cellular organisms → Bacteria	8686	Open in IMG/M
3300018482\|Ga0066669_10070748	All Organisms → cellular organisms → Bacteria	2304	Open in IMG/M
3300019789\|Ga0137408_1233081	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300020170\|Ga0179594_10031421	All Organisms → cellular organisms → Bacteria	1698	Open in IMG/M
3300025922\|Ga0207646_10016847	All Organisms → cellular organisms → Bacteria	6854	Open in IMG/M
3300025922\|Ga0207646_10550072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1038	Open in IMG/M
3300026295\|Ga0209234_1018169	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2658	Open in IMG/M
3300026298\|Ga0209236_1009413	All Organisms → cellular organisms → Bacteria → Proteobacteria	5778	Open in IMG/M
3300026298\|Ga0209236_1048302	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2142	Open in IMG/M
3300026301\|Ga0209238_1046119	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1576	Open in IMG/M
3300026309\|Ga0209055_1039722	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2088	Open in IMG/M
3300026310\|Ga0209239_1248993	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	614	Open in IMG/M
3300026313\|Ga0209761_1117185	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1301	Open in IMG/M
3300026324\|Ga0209470_1046327	All Organisms → cellular organisms → Bacteria	2120	Open in IMG/M
3300026327\|Ga0209266_1009528	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	5668	Open in IMG/M
3300026329\|Ga0209375_1011659	All Organisms → cellular organisms → Bacteria	5439	Open in IMG/M
3300026342\|Ga0209057_1205693	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	559	Open in IMG/M
3300026530\|Ga0209807_1127473	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300026542\|Ga0209805_1109813	Not Available	1310	Open in IMG/M
3300026542\|Ga0209805_1454143	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	500	Open in IMG/M
3300026550\|Ga0209474_10225793	All Organisms → cellular organisms → Bacteria	1175	Open in IMG/M
3300026551\|Ga0209648_10036694	All Organisms → cellular organisms → Bacteria	4255	Open in IMG/M
3300026555\|Ga0179593_1146192	All Organisms → cellular organisms → Bacteria	1758	Open in IMG/M
3300026555\|Ga0179593_1215189	All Organisms → cellular organisms → Bacteria	3392	Open in IMG/M
3300027643\|Ga0209076_1003523	Not Available	3550	Open in IMG/M
3300027654\|Ga0209799_1098492	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300027678\|Ga0209011_1059568	All Organisms → cellular organisms → Bacteria	1153	Open in IMG/M
3300027873\|Ga0209814_10002358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6935	Open in IMG/M
3300027873\|Ga0209814_10123977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1102	Open in IMG/M
3300027873\|Ga0209814_10422369	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	587	Open in IMG/M
3300027880\|Ga0209481_10021621	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2853	Open in IMG/M
3300027909\|Ga0209382_10249075	All Organisms → cellular organisms → Bacteria	2018	Open in IMG/M
3300027961\|Ga0209853_1144800	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	578	Open in IMG/M
3300028536\|Ga0137415_10014136	All Organisms → cellular organisms → Bacteria → Proteobacteria	7925	Open in IMG/M
3300031720\|Ga0307469_10705999	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	915	Open in IMG/M
3300031820\|Ga0307473_10184375	All Organisms → cellular organisms → Bacteria	1224	Open in IMG/M
3300032180\|Ga0307471_101426881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	852	Open in IMG/M
3300033233\|Ga0334722_10734922	Not Available	700	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.44%
Host-Associated	Host-Associated	15.56%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.96%
Plants	Host-Associated → Plants	15.56%
Aquatic	Environmental → Aquatic	1.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.85%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.70%
Freshwater	Environmental → Aquatic → Freshwater	1.48%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.15%
Loam	Environmental → Terrestrial → Soil → Loam	13.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.85%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.22%
Lake	Environmental → Aquatic → Freshwater → Lake	1.48%
Sand	Environmental → Terrestrial → Soil → Sand	1.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.48%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.56%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	30.37%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.41%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.22%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.22%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.22%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.48%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.48%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	20.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	17.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	12.59%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	10.37%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.19%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.70%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.22%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.22%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.22%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.48%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.48%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.74%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300003203	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009807	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012410	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_100358131	3300002558	Grasslands Soil	MTYGYLPQNWPAFQRELDERGLSMSDIEKVEIRPSPAGSPTMVDVVVTARSGRIHTWSQDEGAPGR*
JGI25383J37093_100044043	3300002560	Grasslands Soil	MTYGYLPQNWPAFQRELDERGLSVSDIEKVEIRPSPAGSPTMVDVVVTARSGRIHTWSQDEGAPGR*
JGI25382J43887_103235012	3300002908	Grasslands Soil	MTYGFVPQNWPAFQRELDERGLSVAEIERVEIRPSTDPGATTIEVVVTARSGRVHTWRQDEAAPVR*
JGI25382J43887_104897202	3300002908	Grasslands Soil	MTYGFLPQNWPAFQRQLDAHGISLADIEKVEIRPSGAAAGSATMIDVVVTSRSGRVHAWSQEEGAP
JGI25406J46586_1000099716	3300003203	Tabebuia Heterophylla Rhizosphere	MTYGFVPANWPAFQRELDRRGLAVDDIEKVEIRPSADASSGTTIDVVVTSRSGRVHTWRQDETPISFR*
Ga0066398_101106492	3300004268	Tropical Forest Soil	PMTYGYVPRNWPAFQRELDERGLAMDDIEKVEMRPSADAPSATTIEIVITARSGRVHSWRQDEAAAD*
Ga0066674_100069555	3300005166	Soil	MTYGFLPRNWPAFQRQLAECGLAMDDIEKVELRPTTPSGTMMDVVVTARSGDVHVFRQDEGNG*
Ga0066672_101162573	3300005167	Soil	MTYGFLPQNWPAFQRHLDERGIELSEIETVVIRPSADAAASPTTIDVVITARSGRVHTWSQEERAPVF*
Ga0066677_100199853	3300005171	Soil	MTYGFLPRNWPAFQRQLAERGLAMDDIEKVELRPTTPSGTMMDVVVTARSGDVHVFRQDEGNG*
Ga0066677_100852553	3300005171	Soil	MTYGFLPQNWPAFQRHLDERGIELSEIETVVIRPSAAAAASPTTIDVVVTARSGRVHTWSQEERAPVF*
Ga0066673_100359484	3300005175	Soil	MTYGFLPQNWPAFQRHLDERGIQLSDIETVVIRPSADAAASPTTIDVVITARSGRVHTWSQEERAPVF*
Ga0066684_100123825	3300005179	Soil	MTYGFLPQNWPAFQRHLDERGIELSDIETVVIRPSADAAASPTTIDVVITARSGRVHTWSQEERAPVF*
Ga0066685_103609362	3300005180	Soil	MTYGFVPQNWPAFQRELDARGLSVAEIERVEIRPSTDPSATTIEVVVTARSGRVHTWRQDEAAPVR*
Ga0066671_106951302	3300005184	Soil	MTYGFLPRNWPEFQRELAERGLAIEDIEKVEIRPTAPGATTTDVVVTARSGDVHTFR
Ga0066675_100137371	3300005187	Soil	MTYGFLPQNWPAFQRHLDERGIELSDIETVVIRPSADAAASLTTIDVVITARSGRVHTWSQEERAPVF*
Ga0066388_1000891532	3300005332	Tropical Forest Soil	MTYGYVPSNWPAFQRELDERGLAMDDIEKVEIRPTADAPSATTIEVVVTARSGRVHSWRQDEAPPAD*
Ga0066388_1001554863	3300005332	Tropical Forest Soil	MTYGYVPRNWPAFQRELDERGLAMDDIEKIEIRPSADAPSATTIDIVVTARSGHVHTWRQDEAAGAD*
Ga0066388_1001980544	3300005332	Tropical Forest Soil	MTYGYVPRNWPAFQRELDERGLAMEDIEKIEMRPSADAPSATTIEIVVTARSGRVHSWRQDEAAAG*
Ga0066388_1071216752	3300005332	Tropical Forest Soil	MPYGYQPLNWPAFQRQLAERGLAVDDIEKVEIRPSAAAASEVIVTARSGDVHVW
Ga0066388_1079977242	3300005332	Tropical Forest Soil	VPSNWPAFQRELDERGLAMDDIEKVEIRPSADAPSATTIEVVVTARSGRVHSWRQDEAAPAD*
Ga0066686_103498871	3300005446	Soil	MTYGFVPQNWPAFQRELDERGLSVAEIERVEIRPSTDPSATTIEVVVTARSGRVHTWRQDEAAPVR*
Ga0066687_102850702	3300005454	Soil	MTYGFLPQNWPAFQRHLDERGIELSDIETVVIRPSANAAASPTTIDVVITARSGRVHTWSQEERAPVF*
Ga0070707_10000094028	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MTYGFVPNNWPAFQRELDERGLAMDDIEKVEIRPSADPPSATSIEVVVTARSGRVHSWRQDEAPPAD*
Ga0070699_1012141322	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MTYGYLPQNWPAFQRHLDEQGIELSDIEKVVIRPSADAAASPTTIDVVVTARSGRVHTWSQEERAPVF*
Ga0070697_1003336882	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MSYGFLPQNWPAFQRHLDEQGIELSDIEKVVIRPSADAAASPTTIDVVVTARSGRVHTWSQEERAPVF*
Ga0066701_100132982	3300005552	Soil	MTYGFLPRNWPAFQHQLAERGLAMDDIEKVELRPTTPSGTMMDVVVTARSGDVHVFRQDEGNG*
Ga0066700_102647582	3300005559	Soil	MTYGFLPRNWPAFQRQLAERGLAMADIEKVELRPTTPSGTMMDVVVTARSGDVHVFRQDEGNG*
Ga0066705_105769162	3300005569	Soil	GYLPQNWPAFQRELDERGLSVSDIEKVEIRPSPAGSPTMVDVVVTARSGRIHTWSQDEGAPGR*
Ga0066654_100473653	3300005587	Soil	MTYGFLPRNWPAFQRQLAERGLTMDDIEKVELRPTTPSGTMMDVVVTARSGDVHVFRQDEGNG*
Ga0066905_1006220792	3300005713	Tropical Forest Soil	MTYGYVPRNWPAFQRELDQRGLAMDDIEKVEIRPSADAPSATTIEIVVTARSGRVHTWRQDEAAPAD*
Ga0066903_1063431372	3300005764	Tropical Forest Soil	MPYGYQPLNWPAFQRQLAERGLAVDDIEKVEIRPSAAAASEVIVTARSGDVHVWCQDEGQSA*
Ga0081455_100829813	3300005937	Tabebuia Heterophylla Rhizosphere	MTYGYVPRNWPAFQRELDERGLSLDDIEKVEIRPTADAASATTIEVVVTARSGRVHSWRQDEGATAR*
Ga0081539_104761451	3300005985	Tabebuia Heterophylla Rhizosphere	MTYGFVPGNWPTFQRELDRRGLAVDDIEKVEIRPSADASSATTIDVVVTARSGRVHAWRQDEAVG
Ga0075417_100177214	3300006049	Populus Rhizosphere	MTYGFVPGNWPVFQRELDERGLAMDDIEKVEIRPSADAPSATTIDVVVTARSGRVHIWRQDEAAGPF*
Ga0075417_101361252	3300006049	Populus Rhizosphere	MTYGYVPSNWPAFQRELDERGLAMDDIEKVEIRPSADAPNATTIEVVVTARSGRVHSWRQDGAAPAD*
Ga0075417_105425452	3300006049	Populus Rhizosphere	MTYGYVPRNWSAFQRELDERGLAMDDIEKIEMRPSADAPSATTIEIVVTARSGRVHSWRQDEAAPAD*
Ga0066658_104107072	3300006794	Soil	MTYGFLPRNWPAFQRQLAERGLAMDDIEKVELRPTTPSGTMMDVVVTARSGDVHVFRQDEGNDGGVQCRRASAQS*
Ga0066660_104227062	3300006800	Soil	MTYGFLPQNWPAFQRHLDERGIELSDIETVVIRPSAAAAASPTTIDVVVTARSGRVHTWSQEERAPVF*
Ga0066660_114917542	3300006800	Soil	MTYGFLPRNWPAFQRELEERGLAIGDIEKVELRPTATSATTIEVVVTARSGDVHAWNQDEVAED*
Ga0075428_10000254114	3300006844	Populus Rhizosphere	MTYGFVPGNWPAFQRELEQRGLSVDDIEKVEIRPSDDAPGPTMFDVVVTARSGAIHAWRQDEAPPPV*
Ga0075421_1012361221	3300006845	Populus Rhizosphere	MTYGYVPSNWPAFQGELDERGLAMDDIEKVEIRPSADAPNATTIEVVVTARSGRVHSWRQDGAAPAD*
Ga0075425_1030590661	3300006854	Populus Rhizosphere	GRMPMTYGYVPSNWPAFQRELDERGLAMDDIEKVEIRPSADAPNATTIEVVVTARSGRVHSWRQDGAAPAD*
Ga0075424_1020789052	3300006904	Populus Rhizosphere	MTYGFLPRNWPAFQRELAELGLAIDDIEKVEIRPTAPGATTTDVVVTARSGDVHTFRQDEAEG*
Ga0075435_1008841092	3300007076	Populus Rhizosphere	MTYGFVPNNWPAFQRELDARGLAMDDIEKVEIRPSADAPSATTIEVVVTARSGRVHTWRQDEAAPAD*
Ga0099791_100661133	3300007255	Vadose Zone Soil	VDRRFRERTYGFLPQNWPAFQRELDERGLAVGDIEKVEIRPSLAGSPTTVDVVVTARSGQIHTWSQDESAPVR*
Ga0099791_100967952	3300007255	Vadose Zone Soil	MTYGFLPQNWPAFQRHLDEQGIELSDIEKVVIRPSADAAASPTTIDVVVTARSGRVHTWSQEERAPVF*
Ga0066710_1007609862	3300009012	Grasslands Soil	MTYGFVPQDLPAFQRRLDAQGIVLSDIEKIEIRPSATDATLIDVVVTSRSGRVHAWSQEERSSV
Ga0075418_100958143	3300009100	Populus Rhizosphere	MPMTYGYVPRNWSAFQRELDERGLAMDDIEKIEMRPSADAPSATTIEIVVTARSGRVHSWRQDEAAPAD*
Ga0114129_100015379	3300009147	Populus Rhizosphere	MPMTYGYVPSNWPAFQRELDERGLAMDDIEKVEIRPSADAPNATTIEVVVTARSGRVHSWRQDGAAPAD*
Ga0114129_114407471	3300009147	Populus Rhizosphere	MPMTYGYVPRNWPAFQRELDQRGLAMDDIEKVEIRPSADAPSATTIEVVVTARSGRVHTWRQDEAAAD*
Ga0126374_117247271	3300009792	Tropical Forest Soil	MPMTYGYVPSNWPAFQRELDERGLAMDDIEKVEIRPSADAPSATTIEVVVTARSGRVHSWRQDEAVPAD*
Ga0105061_10340982	3300009807	Groundwater Sand	MTYGFLPQNWPAFRRELDARGIAVDEIEKVELRPTADAASAPLIDVVVTARSGRVHTWRQDESAPLA*
Ga0126384_100074009	3300010046	Tropical Forest Soil	GYVPRNWPAFQRELDERGLAMDDIEKVEMRPSADAPSATTIEIVVTARSGRVHSWRQDEAAAD*
Ga0126382_121819622	3300010047	Tropical Forest Soil	MTYGYVPRNWPAFQRELDERGLAMDDIEKVEMRPSTDAPSATTIEIVITARSGRVHSWRQDEAAAD*
Ga0134109_101009523	3300010320	Grasslands Soil	TYGYLPQNWPAFQRELDERGLSVSDIEKVEIRPSPAGSPTMVDVVVTARSGRIHTWSQDEGAPGR*
Ga0134064_101185371	3300010325	Grasslands Soil	WTAPTHPVDRRSHEMTYGYLPQNWPAFQRELDERGLSVSDIEKVEIRPSPAGSPTMVDVVVTARSGRIHTWSQDESAPAR*
Ga0134071_100042624	3300010336	Grasslands Soil	MTYGYLPQNWPAFQRELDERGLSVSDIEKVEIRPSPAGSPTMVDVVVTARCGRIHTWSQDEGAPGR*
Ga0134071_101921952	3300010336	Grasslands Soil	MTYGFLPRNWPAFQRQLAERGLAMDDIEKVELRPTTPSGTMMDVVVTARSGDVHVFRQDEGIG*
Ga0134062_102252452	3300010337	Grasslands Soil	MTYGYLPQNWPAFQRELDERGLSVSDIEKVEIRPSPAGSPTMVDVVVTARSGRIHT
Ga0126370_123928942	3300010358	Tropical Forest Soil	MPMTYGYVPSNWPAFQRELDERGLAMDDIEKVEIRPSADAPSATTIEVVVTARSGRVHSWRQDEAAPAD*
Ga0126376_104929032	3300010359	Tropical Forest Soil	MPYGYQPLNWPAFQRQLAERGLAVDDIEKVEIRPSAAAASAVIVTARSGDVHVWCQDEGQSA*
Ga0126372_102452331	3300010360	Tropical Forest Soil	VTSWTAWEEGEMPYGYQPLNWPAFQRQLAERGLAVDDIEKVEIRPSAAAASEVIVTARSGDVHVW
Ga0126372_103521052	3300010360	Tropical Forest Soil	MPMTYGYVPSNWPAFQRELDERGLAMDDIEKVEIRPTADAPSATTIEVVVTARSGRVHSWRQDEAPPAD*
Ga0134066_101379572	3300010364	Grasslands Soil	MTYGFLPRNWPAFQRQLAERGLAMDDIETVELRPTTPSGTMMDVVVTARSGDVHVFRQDEGNG*
Ga0136847_112114502	3300010391	Freshwater Sediment	VTYGFLPRNWPAFRRELAARGLAVDDIEKVEIRPSADAASATLIDVVVTARSGRVHAWSQDDGAPLEMPDRRREDPR*
Ga0137399_101031173	3300012203	Vadose Zone Soil	MTYGFLPQNWPAFQRQLDEHGIALADIEKVEIRPSADAAGSATMIDVVVTARSGRVHAWRQDESAPRLDD*
Ga0137399_104628862	3300012203	Vadose Zone Soil	MTYGFSPQNWPAFQRELDERGLSVSDIEKVEIRPSPAGSPTTVDVVVTARSGQIHTWSQDESAPVR*
Ga0137399_108098202	3300012203	Vadose Zone Soil	MTYGFLPQNWPAFQRHLDERGIELGDIEKVVIRPSADAAASPTTIDVVVTARSGRVHTWSQEESAPVR*
Ga0137399_113222542	3300012203	Vadose Zone Soil	MTYGFLPQNWPAFQRELDERGLSVVAVALEKIRPSAAGGPTTVDVVVTARSGRIHTWSQDEGAPAR*
Ga0137362_105958482	3300012205	Vadose Zone Soil	MTYGFLPQNWPAFQRHLDEQGIELSDIEKVVIRPSADAAASPTTIDVVVTARSGRVHSWSQEESAPVR*
Ga0137371_114304721	3300012356	Vadose Zone Soil	MTYGFLPPNWPAFQRQLAECGLAMDDIEKVELRPTTPSGTMMDVVVTARSGDVHVFRQDEGNG*
Ga0134060_12079641	3300012410	Grasslands Soil	MTYGFLPQNWPAFERELAERGLAVGDIEKVEIRPSPAGSPTMVDVVVTARSGRIHTWSQDEGAPGR*
Ga0137358_102905162	3300012582	Vadose Zone Soil	MTYGFLPQNWPAFQRHLDERGIELSDIETVVIRPSADAAAGPTTIDVVVTARSGRVHTWSQEERAPVF*
Ga0137397_105642752	3300012685	Vadose Zone Soil	MTYGFSPQNWPAFQRQLAERGISLADIEKVEIRPSGDAAGSATMIDVVVTSRSGRVHTWSQDEGAPRFSG*
Ga0137397_106592243	3300012685	Vadose Zone Soil	GFVPQNWPAFQRELDERGLSVGDIEKVEIRPSPAGSPTTVDVVVSARSGQIHTWSQDESAPAR*
Ga0137396_103012222	3300012918	Vadose Zone Soil	MTYGFSPQNWPAFQRELDERGLSVGDIEKVEIRPSPAGSPTMVDVVVTARSGRIHTWSQDEGAPAR*
Ga0137394_100127053	3300012922	Vadose Zone Soil	MTYGFVPQNWPAFQRELDERGLSVGDIEKVEIRPSPAGSPTTVDVVVTARSGQIHTWSQDESAPVR*
Ga0137394_110690712	3300012922	Vadose Zone Soil	MTYGFLPQNWPAFQRHLDERGIELSDIETVVIRPSADAAAGPTTIDVVVTARSGRVHTWSQDERAPVF*
Ga0137419_116270132	3300012925	Vadose Zone Soil	MTYGFLPQNWPAFQRHLEERGIELSEIETVVIRPSADAGASPTTIEVVVTARSGRVHTWSQEERAPVF*
Ga0137404_100043287	3300012929	Vadose Zone Soil	MTYGFLPQNWPAFQRELAERGLSVGDIEKVEIRPSPAGSPTTVDVVVTARSGQIHTWSQDESAPVR*
Ga0137404_104848203	3300012929	Vadose Zone Soil	MTYGYLPQNWPAFQRELDERGLSVSDIEKVEIRRSPAGSPTMVDVVVTARSGRIHTWSQDEGAPGR*
Ga0137407_101996851	3300012930	Vadose Zone Soil	HTPLTEGPHMTYGFLPQNWPAFQRHLDERGIELSEIETVVIRPSAAAAASPTTIDVVVTARSGRVHTWSQEERAPVF*
Ga0137410_104985712	3300012944	Vadose Zone Soil	MTYGFLPQNWPAFQRHLDEQGIELSDIEKVVIRPSADAGASPTTIDVVVTARSGRVHTWSQEERAPVF*
Ga0137410_108016001	3300012944	Vadose Zone Soil	QNWPAFQRELDERGLSVGDIEKVEIRPSPAGSPTTVDVVVTARSGQIHTWSQDESAPVR*
Ga0134077_100167834	3300012972	Grasslands Soil	MTYGFVPQNWPAFQRELDARGLSVAEIERVEIRPSTDPSATTIEVVVTTRSGRVHTWRQDEAAPVR*
Ga0134087_101586392	3300012977	Grasslands Soil	MTYGFLPRNWPAFQRQLAERGLAMDDIEKLELRPTTPSGTMMDVVVTARSGDVHVFRQDEGNG*
Ga0134087_102821742	3300012977	Grasslands Soil	MTYGYLPQNWPAFQRELDERGLSVSDIEKVEIRPSPAGSPTMVDVVVTARSGRIHTWSQYEGAPGR*
Ga0134075_100016737	3300014154	Grasslands Soil	MTYGFVPQNWPAFQRELDERGLSVAEIERVEIRPSTDPSATTIEVVVTTRSGRVHTWRQDEAAPVR*
Ga0137409_102216681	3300015245	Vadose Zone Soil	RIREMTYGFVPQNWPAFQRELDERGLSVGDIEKVEIRPSPAGSPTTVDVVVTARSGQIHTWSQDESAPVR*
Ga0132258_106369622	3300015371	Arabidopsis Rhizosphere	MPMTYGYVPSNWPAFQRELDERGLAMDDIEKVEIRPSADAPNATTIEVVVTARSGRVHSWRQDEAAPAD*
Ga0132257_1037390492	3300015373	Arabidopsis Rhizosphere	MTYGFVPNNWPAFQRELDERGLSMDDIEKVEIRPSADAPSATSIEVVVTARSGRVHSWRQ
Ga0134112_101710821	3300017656	Grasslands Soil	MTYGFLPRNWPAFQRELAELGLAIDDIEKVEIRPTAPGTTTTEVVVTARSGDVHTFRQDEAEG
Ga0134074_11312422	3300017657	Grasslands Soil	MTYGFLPHNWPAFQRQLAERGLAMDDIEKVELRPTTPSGTMMDVVVTARSGDVHVFRQDEGNG
Ga0134083_100018265	3300017659	Grasslands Soil	MTYGFVPQNWPAFQRELDERGLSVAEIERVEIRPSTDPSATTIEVVVTARSGRVHTWRQDEAAPVR
Ga0066655_100013088	3300018431	Grasslands Soil	MTYGYLPQNWPAFQRELDERGLSVSDIEKVEIRPSPAGSPTMVDVVVTARSGRIHTWSQDEGAPGR
Ga0066667_100029703	3300018433	Grasslands Soil	MTYGFLPRNWPAFQRQLAECGLAMDDIEKVELRPTTPSGTMMDVVVTARSGDVHVFRQDEGNG
Ga0066667_100867352	3300018433	Grasslands Soil	MTYGFLPQNWPAFQRHLDERGIELSDIETVVIRPSADAAASLTTIDVVITARSGRVHTWSQEERAPVF
Ga0066669_100016581	3300018482	Grasslands Soil	MTYGFLPRNWPAFQRQLAERGLAMDDIEKVELRPTTPSGTMMDVVVTARSGDVHVFRQDEGNG
Ga0066669_100707483	3300018482	Grasslands Soil	MTYGFLPQNWPAFQRHLDERGIQLSDIETVVIRPSADAAASPTTIDVVITARSGRVHTWSQEERAPVF
Ga0137408_12330811	3300019789	Vadose Zone Soil	MTYGFLPQNWPAFQRELAERGLSVGDIEKVEIRPSPAGSPTTVDVVVTARSGQIHTWSQDESAPVR
Ga0179594_100314213	3300020170	Vadose Zone Soil	MTYGFVPQNWPAFQRELDERGLSVAEIERVEIRPSTDPGATTIEVVVTARSGRVHTWRQDEAAPVR
Ga0207646_100168472	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTYGFVPNNWPAFQRELDERGLAMDDIEKVEIRPSADPPSATSIEVVVTARSGRVHSWRQDEAPPAD
Ga0207646_105500722	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTYGFIPQDWPAFRRELDARGIAVADIEKVEIRPSAAVTAGATPTIDVVVTSRSGRVHAWSQEERSSV
Ga0209234_10181695	3300026295	Grasslands Soil	MTYGFLPQNWPAFQRHLDERGIELSEIETVVIRPSAAAAASPTTIDVVGTARSGRVHTWSQEERAPVF
Ga0209236_10094131	3300026298	Grasslands Soil	PQNWPAFQRELDERGLSMSDIEKVEIRPSPAGSPTMVDVVVTARSGRIHTWSQDEGAPGR
Ga0209236_10483024	3300026298	Grasslands Soil	MTYGYLPQNWPAFQRELDERGLSMSDIEKVEIRPSPAGSPTMVDVVVTARSGRIHTWSQDEGAPGR
Ga0209238_10461192	3300026301	Grasslands Soil	MTYGFLPQNWPAFQRHLDERGIELSDIETVVIRPSADAAASPTTIDVVITARSGRVHTWSQEERAPVF
Ga0209055_10397224	3300026309	Soil	MTYGFLPQNWPAFQRHLDERGIELSEIETVVIRPSAAAAASPTTIDVVVTARSGRVHTWSQEERAPVF
Ga0209239_12489932	3300026310	Grasslands Soil	MTYGFLPRNWPAFQRQLAERGLAMDDIEKVELRPTTPSGTMMDVVVTARSGDVHVFRQDEGIG
Ga0209761_11171853	3300026313	Grasslands Soil	MTYGFLPQNWPAFQRQLDAHGISLADIEKVEIRPSGAAAGSATMIDVVVTSRSGRVHAWSQEEGAPRLSG
Ga0209470_10463274	3300026324	Soil	MTYGFVPQNWPAFQRELDARGLSVAEIERVEIRPSTDPSATTIEVVVTARSGRVHTWRQDEAAPVR
Ga0209266_10095283	3300026327	Soil	MTYGFLPRNWPAFQRQLRPTTPSGTMMDVVVTARSGDVHVFRQDEGNG
Ga0209375_10116595	3300026329	Soil	MTYGFLPRNWPAFQRQLAERGLAMDDIEKVELRPTTPSGPMDVVVTARSGDVHVFRQDEGNG
Ga0209057_12056931	3300026342	Soil	MTYGFLPRNWPAFQRQLAERGLAMDDIEKLELRPTTPSGTMMDVVVTARSGDVHVFRQ
Ga0209807_11274732	3300026530	Soil	GYLPQNWPAFQRELDERGLSVSDIEKVEIRPSPAGSPTMVDVVVTARSGRIHTWSQDEGAPGR
Ga0209805_11098131	3300026542	Soil	TYGFLPQNWPAFQRHLDERGIELSDIETVVIRPSADAAASPTTIDVVITARSGRVHTWSQEERAPVF
Ga0209805_14541431	3300026542	Soil	MTYGFLPRNWPAFQRQLAERGLAMDDIEKVELRPTTPSGTMMDVVVTARSGDVHVFRQDEGNDGGVQCRRASAQS
Ga0209474_102257931	3300026550	Soil	MTYGFLPQNWPAFQRHLDERGIELSDIETVVIRPSADAASPTTIDVVITARSGRVHTWSQEERAPVF
Ga0209648_100366944	3300026551	Grasslands Soil	MTYGFLPQNWPVFQRQLDERGIELSDIEKVVISPSADAAASPTTIDVVVTARSGRVHTWSQEESAPVR
Ga0179593_11461922	3300026555	Vadose Zone Soil	MTYGFLPQNWPAFQRHLDEQGIELSDIEKVVIRPSADAAASPTTIDVVVTARSGRVHTWSQEERAPVF
Ga0179593_12151891	3300026555	Vadose Zone Soil	MTYGFVPQNWPAFQRELDERGLSVSDIEKVEIRPSPAGSPTTVDVVVTARSGQIHTWSQDESAPVR
Ga0209076_10035231	3300027643	Vadose Zone Soil	AFQRHLDEQGIELSDIEKVVIRPSADAAASPTTIDVVVTARSGRVHTWSQEERAPVF
Ga0209799_10984921	3300027654	Tropical Forest Soil	PMTYGYVPRNWPAFQRELDERGLAMDDIEKVEMRPSADAPSATTIEIVITARSGRVHSWRQDEAAAD
Ga0209011_10595682	3300027678	Forest Soil	MTYGFLPQNWPAFQRHLDERGIELGDIEKVVIRPSADAAASPTTIDVVVTARSGRVHTWSQEESAPVF
Ga0209814_100023584	3300027873	Populus Rhizosphere	MTYGFVPGNWPVFQRELDERGLAMDDIEKVEIRPSADAPSATTIDVVVTARSGRVHIWRQDEAAGPF
Ga0209814_101239772	3300027873	Populus Rhizosphere	MTYGYVPSNWPAFQRELDERGLAMDDIEKVEIRPSADAPNATTIEVVVTARSGRVHSWRQDGAAPAD
Ga0209814_104223692	3300027873	Populus Rhizosphere	MTYGYVPRNWSAFQRELDERGLAMDDIEKIEMRPSADAPSATTIEIVVTARSGRVHSWRQDEAAPAD
Ga0209481_100216215	3300027880	Populus Rhizosphere	MTYGFVPGNWPAFQRELEQRGLSVDDIEKVEIRPSDDAPGPTMFDVVVTARSGAIHAWRQDEAPPPV
Ga0209382_102490753	3300027909	Populus Rhizosphere	MTYGYVPSNWPAFQGELDERGLAMDDIEKVEIRPSADAPNATTIEVVVTARSGRVHSWRQDGAAPAD
Ga0209853_11448002	3300027961	Groundwater Sand	MTYGFLPQNWPAFRRELDARGIAVDEIEKVELRPTADAASAPLIDVVVTARSGRVHTWRQDESAPLA
Ga0137415_100141365	3300028536	Vadose Zone Soil	MTYGFLPQNWPAFQRHLDERGIELSDIEKVVIRPSADAAASPTTIDVVVTARSGRVHTWSQEESAPVR
Ga0307469_107059992	3300031720	Hardwood Forest Soil	MTYGFVPNNWPAFQRELDERGLSMDDIEKVEIRPSADAPSATSIEVVVTARSGRVHSWRQDEAAPAD
Ga0307473_101843751	3300031820	Hardwood Forest Soil	MTYGFVPNNWPAFQRELDERGLAMDDIEKVEIRPSADAPSATSIEVVVTARSGRVHSWRQDEAA
Ga0307471_1014268812	3300032180	Hardwood Forest Soil	MTYGFVPQDWPAFRRQLDAQGIAESDIEKIEIRPSATDATLIDVVVTSRSGRVHAWSQDERSSV
Ga0334722_107349221	3300033233	Sediment	RLGAGGQRMTYGFVPQNWYAFQRELADRGIALADIEKVEIRPAAGAPTRIDVVLTVRSGQVHNWTQDEGVSAAARPR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F058025

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences