Metagenome / Metatranscriptome Family F058009

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F058009
Family Type	Metagenome / Metatranscriptome
Number of Sequences	135
Average Sequence Length	55 residues
Representative Sequence	AIVADHYGRHFIRALRQPSQYWGWLLLFAAVIFSLIIAGIAVNRRLAATTSA
Number of Associated Samples	118
Number of Associated Scaffolds	135

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	7.58 %
% of genes near scaffold ends (potentially truncated)	90.37 %
% of genes from short scaffolds (< 2000 bps)	85.19 %
Associated GOLD sequencing projects	114
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (84.444 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland (11.111 % of family members)
Environment Ontology (ENVO)	Unclassified (36.296 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.926 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 62.50% β-sheet: 0.00% Coil/Unstructured: 37.50%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 135 Family Scaffolds
PF02586	SRAP	14.07
PF01212	Beta_elim_lyase	8.89
PF00355	Rieske	5.19
PF05638	T6SS_HCP	3.70
PF02547	Queuosine_synth	2.22
PF00072	Response_reg	1.48
PF14063	DUF4254	1.48
PF09990	DUF2231	1.48
PF03692	CxxCxxCC	1.48
PF00248	Aldo_ket_red	0.74
PF06262	Zincin_1	0.74
PF16640	Big_3_5	0.74
PF08592	Anthrone_oxy	0.74
PF14534	DUF4440	0.74
PF02133	Transp_cyt_pur	0.74
PF13358	DDE_3	0.74
PF01066	CDP-OH_P_transf	0.74
PF09851	SHOCT	0.74
PF13367	PrsW-protease	0.74
PF02401	LYTB	0.74
PF13007	LZ_Tnp_IS66	0.74
PF10502	Peptidase_S26	0.74
PF03699	UPF0182	0.74
PF00132	Hexapep	0.74
PF13442	Cytochrome_CBB3	0.74
PF06778	Chlor_dismutase	0.74
PF03576	Peptidase_S58	0.74
PF00773	RNB	0.74
PF00501	AMP-binding	0.74
PF00873	ACR_tran	0.74
PF13426	PAS_9	0.74
PF00108	Thiolase_N	0.74
PF12680	SnoaL_2	0.74
PF01523	PmbA_TldD	0.74
PF03167	UDG	0.74
PF00133	tRNA-synt_1	0.74
PF01226	Form_Nir_trans	0.74
PF00535	Glycos_transf_2	0.74
PF13565	HTH_32	0.74
PF02073	Peptidase_M29	0.74
PF01740	STAS	0.74
PF08308	PEGA	0.74
PF00589	Phage_integrase	0.74
PF13581	HATPase_c_2	0.74

COG ID	Name	Functional Category	% Frequency in 135 Family Scaffolds
COG1167	DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain	Transcription [K]	17.78
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	14.07
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	8.89
COG4992	Acetylornithine/succinyldiaminopimelate/putrescine aminotransferase	Amino acid transport and metabolism [E]	8.89
COG3033	Tryptophanase	Amino acid transport and metabolism [E]	8.89
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	8.89
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	8.89
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	8.89
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	8.89
COG1104	Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS family	Amino acid transport and metabolism [E]	8.89
COG1003	Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain	Amino acid transport and metabolism [E]	8.89
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	8.89
COG0112	Glycine/serine hydroxymethyltransferase	Amino acid transport and metabolism [E]	8.89
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	8.89
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	8.89
COG0076	Glutamate or tyrosine decarboxylase or a related PLP-dependent protein	Amino acid transport and metabolism [E]	8.89
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	8.89
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	8.89
COG3157	Type VI protein secretion system component Hcp (secreted cytotoxin)	Intracellular trafficking, secretion, and vesicular transport [U]	3.70
COG0809	S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase)	Translation, ribosomal structure and biogenesis [J]	2.22
COG0761	4-Hydroxy-3-methylbut-2-enyl diphosphate reductase IspH	Lipid transport and metabolism [I]	1.48
COG3191	L-aminopeptidase/D-esterase	Amino acid transport and metabolism [E]	1.48
COG2309	Leucyl aminopeptidase (aminopeptidase T)	Amino acid transport and metabolism [E]	0.74
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	0.74
COG3253	Coproheme decarboxylase/chlorite dismutase	Coenzyme transport and metabolism [H]	0.74
COG3663	G:T/U-mismatch repair DNA glycosylase	Replication, recombination and repair [L]	0.74
COG3824	Predicted Zn-dependent protease, minimal metalloprotease (MMP)-like domain	Posttranslational modification, protein turnover, chaperones [O]	0.74
COG4776	Exoribonuclease II	Transcription [K]	0.74
COG0060	Isoleucyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.74
COG5050	sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferases	Lipid transport and metabolism [I]	0.74
COG0143	Methionyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.74
COG2116	Formate/nitrite transporter FocA, FNT family	Inorganic ion transport and metabolism [P]	0.74
COG0525	Valyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.74
COG0312	Zn-dependent protease PmbA/TldA or its inactivated homolog	General function prediction only [R]	0.74
COG1615	Uncharacterized membrane protein, UPF0182 family	Function unknown [S]	0.74
COG1573	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.74
COG1183	Phosphatidylserine synthase	Lipid transport and metabolism [I]	0.74
COG0495	Leucyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.74
COG0692	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.74
COG0558	Phosphatidylglycerophosphate synthase	Lipid transport and metabolism [I]	0.74
COG0557	Exoribonuclease R	Transcription [K]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.44 %
Unclassified	root	N/A	15.56 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.44 %
Unclassified	root	N/A	15.56 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.44 %
Unclassified	root	N/A	15.56 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	63.70 %
Unclassified	root	N/A	15.56 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.22 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.74 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.74 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	23.70 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	17.78 %
Unclassified	root	N/A	15.56 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.74 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.74 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	22.96 %
Unclassified	root	N/A	15.56 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	8.89 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	5.93 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1.48 %
Acidobacteria bacterium 13_1_40CM_2_68_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_68_5	0.74 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.74 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.74 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	22.96 %
Unclassified	root	N/A	15.56 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	8.89 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.93 %
unclassified Bryobacterales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales	1.48 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.74 %
Acidobacteria bacterium 13_1_40CM_2_68_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_68_5	0.74 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.74 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	22.96 %
Unclassified	root	N/A	15.56 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	8.89 %
Candidatus Sulfotelmatomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas	2.22 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1.48 %
Occallatibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter	1.48 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.74 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.74 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.74 %
Acidobacteria bacterium 13_1_40CM_2_68_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_68_5	0.74 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.74 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	22.96 %
Unclassified	root	N/A	15.56 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	8.89 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	2.22 %
Occallatibacter savannae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	1.48 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1.48 %
Granulicella sibirica	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella sibirica	0.74 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.74 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.74 %
Acidobacteria bacterium 13_1_40CM_2_68_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_68_5	0.74 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.74 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918007\|ConsensusfromContig172413	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300004092\|Ga0062389_100175456	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2065	Open in IMG/M
3300004092\|Ga0062389_103700432	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	574	Open in IMG/M
3300005167\|Ga0066672_10099763	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1769	Open in IMG/M
3300005167\|Ga0066672_10458799	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	831	Open in IMG/M
3300005171\|Ga0066677_10481295	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	712	Open in IMG/M
3300005172\|Ga0066683_10191003	All Organisms → cellular organisms → Bacteria → Acidobacteria	1263	Open in IMG/M
3300005177\|Ga0066690_10205896	All Organisms → cellular organisms → Bacteria	1310	Open in IMG/M
3300005187\|Ga0066675_10729914	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	745	Open in IMG/M
3300005451\|Ga0066681_10169673	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1292	Open in IMG/M
3300005471\|Ga0070698_100134918	All Organisms → cellular organisms → Bacteria	2422	Open in IMG/M
3300005554\|Ga0066661_10086962	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1850	Open in IMG/M
3300005950\|Ga0066787_10079013	All Organisms → cellular organisms → Bacteria → Acidobacteria	674	Open in IMG/M
3300006050\|Ga0075028_100767438	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	585	Open in IMG/M
3300006059\|Ga0075017_100870565	All Organisms → cellular organisms → Bacteria → Acidobacteria	698	Open in IMG/M
3300006102\|Ga0075015_100090855	All Organisms → cellular organisms → Bacteria	1519	Open in IMG/M
3300006162\|Ga0075030_100711580	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella sibirica	795	Open in IMG/M
3300006797\|Ga0066659_10098843	All Organisms → cellular organisms → Bacteria	1980	Open in IMG/M
3300007076\|Ga0075435_100664805	All Organisms → cellular organisms → Bacteria → Acidobacteria	905	Open in IMG/M
3300009012\|Ga0066710_104842362	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	503	Open in IMG/M
3300009137\|Ga0066709_102491378	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	698	Open in IMG/M
3300009524\|Ga0116225_1026520	All Organisms → cellular organisms → Bacteria	2917	Open in IMG/M
3300009524\|Ga0116225_1046984	All Organisms → cellular organisms → Bacteria → Acidobacteria	2089	Open in IMG/M
3300009617\|Ga0116123_1053583	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	1142	Open in IMG/M
3300009634\|Ga0116124_1164638	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
3300009636\|Ga0116112_1175881	Not Available	595	Open in IMG/M
3300009639\|Ga0116122_1055069	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1340	Open in IMG/M
3300009639\|Ga0116122_1104398	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	920	Open in IMG/M
3300009641\|Ga0116120_1154586	Not Available	738	Open in IMG/M
3300009643\|Ga0116110_1068302	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1245	Open in IMG/M
3300009645\|Ga0116106_1082386	Not Available	1048	Open in IMG/M
3300009645\|Ga0116106_1187969	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	658	Open in IMG/M
3300009672\|Ga0116215_1137798	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_68_5	1086	Open in IMG/M
3300009764\|Ga0116134_1091502	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1108	Open in IMG/M
3300010303\|Ga0134082_10160946	All Organisms → cellular organisms → Bacteria → Acidobacteria	910	Open in IMG/M
3300010304\|Ga0134088_10303526	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	771	Open in IMG/M
3300010325\|Ga0134064_10025725	All Organisms → cellular organisms → Bacteria → Acidobacteria	1699	Open in IMG/M
3300010375\|Ga0105239_11047777	All Organisms → cellular organisms → Bacteria	938	Open in IMG/M
3300012201\|Ga0137365_10119376	All Organisms → cellular organisms → Bacteria → Acidobacteria	1983	Open in IMG/M
3300012208\|Ga0137376_10418142	All Organisms → cellular organisms → Bacteria	1164	Open in IMG/M
3300012211\|Ga0137377_11222081	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	681	Open in IMG/M
3300012929\|Ga0137404_11047192	All Organisms → cellular organisms → Bacteria → Acidobacteria	747	Open in IMG/M
3300012929\|Ga0137404_11641965	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	596	Open in IMG/M
3300013764\|Ga0120111_1013840	All Organisms → cellular organisms → Bacteria → Acidobacteria	2391	Open in IMG/M
3300014052\|Ga0120109_1013539	All Organisms → cellular organisms → Bacteria	1801	Open in IMG/M
3300014155\|Ga0181524_10414917	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	585	Open in IMG/M
3300014161\|Ga0181529_10156588	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	1380	Open in IMG/M
3300014161\|Ga0181529_10296422	Not Available	904	Open in IMG/M
3300014489\|Ga0182018_10005958	All Organisms → cellular organisms → Bacteria → Acidobacteria	9635	Open in IMG/M
3300014489\|Ga0182018_10360613	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	782	Open in IMG/M
3300014489\|Ga0182018_10740169	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300014492\|Ga0182013_10373071	All Organisms → cellular organisms → Bacteria → Acidobacteria	774	Open in IMG/M
3300014655\|Ga0181516_10105949	All Organisms → cellular organisms → Bacteria → Proteobacteria	1420	Open in IMG/M
3300014655\|Ga0181516_10200275	All Organisms → cellular organisms → Bacteria	1013	Open in IMG/M
3300014657\|Ga0181522_10944890	Not Available	533	Open in IMG/M
3300014657\|Ga0181522_11005109	Not Available	517	Open in IMG/M
3300015358\|Ga0134089_10425305	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571	Open in IMG/M
3300016750\|Ga0181505_10688298	Not Available	662	Open in IMG/M
3300017931\|Ga0187877_1053571	Not Available	1830	Open in IMG/M
3300017931\|Ga0187877_1073043	All Organisms → cellular organisms → Bacteria	1490	Open in IMG/M
3300017935\|Ga0187848_10319149	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	646	Open in IMG/M
3300017936\|Ga0187821_10296935	Not Available	641	Open in IMG/M
3300017940\|Ga0187853_10346416	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	664	Open in IMG/M
3300017955\|Ga0187817_10133216	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1576	Open in IMG/M
3300017999\|Ga0187767_10150313	All Organisms → cellular organisms → Bacteria → Acidobacteria	697	Open in IMG/M
3300018006\|Ga0187804_10366545	All Organisms → cellular organisms → Bacteria → Acidobacteria	634	Open in IMG/M
3300018009\|Ga0187884_10317104	Not Available	629	Open in IMG/M
3300018012\|Ga0187810_10169760	All Organisms → cellular organisms → Bacteria → Acidobacteria	880	Open in IMG/M
3300018012\|Ga0187810_10538446	All Organisms → cellular organisms → Bacteria → Acidobacteria	501	Open in IMG/M
3300018013\|Ga0187873_1369743	All Organisms → cellular organisms → Bacteria → Acidobacteria	523	Open in IMG/M
3300018026\|Ga0187857_10122676	Not Available	1250	Open in IMG/M
3300018033\|Ga0187867_10307206	Not Available	887	Open in IMG/M
3300018037\|Ga0187883_10229925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	949	Open in IMG/M
3300018043\|Ga0187887_10051996	All Organisms → cellular organisms → Bacteria	2517	Open in IMG/M
3300018043\|Ga0187887_10248524	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	1054	Open in IMG/M
3300018047\|Ga0187859_10040215	All Organisms → cellular organisms → Bacteria → Acidobacteria	2502	Open in IMG/M
3300018062\|Ga0187784_10453806	All Organisms → cellular organisms → Bacteria	1035	Open in IMG/M
3300018431\|Ga0066655_10241911	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1146	Open in IMG/M
3300018468\|Ga0066662_10585079	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1040	Open in IMG/M
3300018468\|Ga0066662_11543082	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	692	Open in IMG/M
3300020021\|Ga0193726_1246087	All Organisms → cellular organisms → Bacteria → Acidobacteria	727	Open in IMG/M
3300020580\|Ga0210403_11138980	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300021401\|Ga0210393_11289424	All Organisms → cellular organisms → Bacteria → Proteobacteria	586	Open in IMG/M
3300021402\|Ga0210385_11034143	All Organisms → cellular organisms → Bacteria → Acidobacteria	631	Open in IMG/M
3300021432\|Ga0210384_11280794	Not Available	638	Open in IMG/M
3300025434\|Ga0208690_1011298	Not Available	1780	Open in IMG/M
3300025454\|Ga0208039_1071683	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300025477\|Ga0208192_1081916	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300025496\|Ga0208191_1082124	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	669	Open in IMG/M
3300025498\|Ga0208819_1072205	All Organisms → cellular organisms → Bacteria → Acidobacteria	761	Open in IMG/M
3300026296\|Ga0209235_1143608	All Organisms → cellular organisms → Bacteria	964	Open in IMG/M
3300026298\|Ga0209236_1093142	All Organisms → cellular organisms → Bacteria	1371	Open in IMG/M
3300026328\|Ga0209802_1022372	All Organisms → cellular organisms → Bacteria → Acidobacteria	3446	Open in IMG/M
3300026329\|Ga0209375_1175702	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	858	Open in IMG/M
3300026456\|Ga0255351_1083987	All Organisms → cellular organisms → Bacteria → Acidobacteria	577	Open in IMG/M
3300026537\|Ga0209157_1131730	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1145	Open in IMG/M
3300026538\|Ga0209056_10008646	All Organisms → cellular organisms → Bacteria	10437	Open in IMG/M
3300026547\|Ga0209156_10270456	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	778	Open in IMG/M
3300026548\|Ga0209161_10004694	All Organisms → cellular organisms → Bacteria	10858	Open in IMG/M
3300027330\|Ga0207777_1034590	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	922	Open in IMG/M
3300027609\|Ga0209221_1145537	Not Available	591	Open in IMG/M
3300027854\|Ga0209517_10237720	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	1099	Open in IMG/M
3300027867\|Ga0209167_10142322	Not Available	1253	Open in IMG/M
3300027882\|Ga0209590_10481678	All Organisms → cellular organisms → Bacteria → Acidobacteria	802	Open in IMG/M
3300028017\|Ga0265356_1030129	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300028047\|Ga0209526_10510685	All Organisms → cellular organisms → Bacteria → Acidobacteria	782	Open in IMG/M
3300028069\|Ga0255358_1036874	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	691	Open in IMG/M
3300029636\|Ga0222749_10014005	All Organisms → cellular organisms → Bacteria	3252	Open in IMG/M
3300029914\|Ga0311359_10609044	All Organisms → cellular organisms → Bacteria → Acidobacteria	803	Open in IMG/M
3300029914\|Ga0311359_10650152	All Organisms → cellular organisms → Bacteria → Acidobacteria	766	Open in IMG/M
3300029919\|Ga0302141_1053327	All Organisms → cellular organisms → Bacteria → Acidobacteria	1096	Open in IMG/M
3300030058\|Ga0302179_10411043	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	595	Open in IMG/M
3300030399\|Ga0311353_10824713	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	789	Open in IMG/M
3300030618\|Ga0311354_10794726	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	893	Open in IMG/M
3300030646\|Ga0302316_10420451	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300030707\|Ga0310038_10424531	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	574	Open in IMG/M
3300031234\|Ga0302325_10004893	All Organisms → cellular organisms → Bacteria	30840	Open in IMG/M
3300031525\|Ga0302326_13030273	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300031708\|Ga0310686_110917155	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300031712\|Ga0265342_10041069	All Organisms → cellular organisms → Bacteria → Acidobacteria	2803	Open in IMG/M
3300031715\|Ga0307476_10691086	Not Available	755	Open in IMG/M
3300031753\|Ga0307477_10178808	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1478	Open in IMG/M
3300031820\|Ga0307473_11414395	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	524	Open in IMG/M
3300031823\|Ga0307478_11246389	Not Available	619	Open in IMG/M
3300032160\|Ga0311301_10293451	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2615	Open in IMG/M
3300032421\|Ga0310812_10498178	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	548	Open in IMG/M
3300032770\|Ga0335085_10553776	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1303	Open in IMG/M
3300032805\|Ga0335078_10388531	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1837	Open in IMG/M
3300033983\|Ga0371488_0030350	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	3684	Open in IMG/M
3300034091\|Ga0326724_0527727	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	600	Open in IMG/M
3300034199\|Ga0370514_012315	All Organisms → cellular organisms → Bacteria	2008	Open in IMG/M
3300034282\|Ga0370492_0440098	All Organisms → cellular organisms → Bacteria → Acidobacteria	529	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.04%
Host-Associated	Host-Associated	2.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	62.22%
Aquatic	Environmental → Aquatic	34.81%
Plants	Host-Associated → Plants	2.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	51.85%
Freshwater	Environmental → Aquatic → Freshwater	31.85%
Peat	Environmental → Terrestrial → Peat	10.37%
Sediment	Environmental → Aquatic → Sediment	2.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.00%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	31.85%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	10.37%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.15%
Loam	Environmental → Terrestrial → Soil → Loam	3.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.48%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.48%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	16.30%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	15.56%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.81%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	11.11%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	10.37%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.41%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.44%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.44%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.70%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.22%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.22%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.48%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.74%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	11.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.37%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	9.63%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	5.19%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.19%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.19%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.44%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.44%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.22%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	2.22%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.22%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.96%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.48%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.48%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.48%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.48%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.48%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.48%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.48%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.74%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.74%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.74%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918007	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_all	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005950	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009617	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_100	Environmental	Open in IMG/M
3300009634	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150	Environmental	Open in IMG/M
3300009636	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150	Environmental	Open in IMG/M
3300009639	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40	Environmental	Open in IMG/M
3300009641	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150	Environmental	Open in IMG/M
3300009643	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013764	Permafrost microbial communities from Nunavut, Canada - A28_35cm_6M	Environmental	Open in IMG/M
3300014052	Permafrost microbial communities from Nunavut, Canada - A23_35cm_12M	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300025434	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10 (SPAdes)	Environmental	Open in IMG/M
3300025454	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150 (SPAdes)	Environmental	Open in IMG/M
3300025477	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150 (SPAdes)	Environmental	Open in IMG/M
3300025496	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40 (SPAdes)	Environmental	Open in IMG/M
3300025498	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150 (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026456	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T-25.r2	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027330	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 35 (SPAdes)	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028017	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4	Host-Associated	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028069	Peat soil microbial communities from Stordalen Mire, Sweden - G.F.S.T0	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029914	III_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029919	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_2	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030646	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_2	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031712	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG	Host-Associated	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300033983	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB23AN SIP fraction	Environmental	Open in IMG/M
3300034091	Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00N	Environmental	Open in IMG/M
3300034199	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_01D_14	Environmental	Open in IMG/M
3300034282	Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A_all_C_01240260	2140918007	Soil	AICRTARYAVIAIVAEHYGRHFIRMLRHPTQYWGWLLLFAAMIFVLIAGGILINRRLANSSAE
Ga0062389_1001754563	3300004092	Bog Forest Soil	RYTAVAWIAERYGRHFVRVLRHPTQYWGWLLVFATVISLLIGAGIMINRRLAAA*
Ga0062389_1037004321	3300004092	Bog Forest Soil	LYGRPFIRVLRHPTQYWGWLLLFAAVVAGFVATGILLNRRLSTAPAT*
Ga0066672_100997635	3300005167	Soil	ADHYGRHFIRALRQPGQYWGWLLLFVAVIFSLIIAGILLNRRLAATTSA*
Ga0066672_104587992	3300005167	Soil	ICRAARYGIIAIVADHYGRHFIRALRQPSQYWGWLLLFAAVIFSLIIAGIAVNRRLAATTSA*
Ga0066677_104812951	3300005171	Soil	RYGIIAIVADHYGRHFIRALRQPSQYWGWLLLFAAVIFSLIIAGIAVNRRLPATTSA*
Ga0066683_101910031	3300005172	Soil	VADHYGRHFIRALRQPSQYWGWLLLFAAVIFSLIIAGIAVNRRLAATTSA*
Ga0066690_102058963	3300005177	Soil	IVADHYGRHFIRALRQPSQYWGWLLLFAAVIFSLIIAGIAVNRRLAATTSA*
Ga0066675_107299141	3300005187	Soil	IVADHYGRHFIRALRQPSQYWGWLLLFAAVIFSLIIAGIAVNRRLPATTSA*
Ga0066681_101696731	3300005451	Soil	DHYGRHFIRALRQPGQYWGWLLLFAAVIFSLIIVGIAVNRRLAATTSA*
Ga0070698_1001349181	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	DHYGRHFIRALRQPGQYWGWLLLFAAVIFSLSIAGILLNRRLAATTSA*
Ga0066661_100869624	3300005554	Soil	VADHYGRHFIRALRQPSQYWGWLLLFAAVIFSLIIAGIAVNRRLPATTSA*
Ga0066787_100790131	3300005950	Soil	LQFIAIVADDYGRHFVGVLRHPFQYWGWLLLFAAVIFSLIMAGILLNRRLTAAN
Ga0075028_1007674381	3300006050	Watersheds	ICRGARYVFIAIIADHYGRHFIRVLRHPAQYWGWLLLFAAVMFGLIMAGIVLNKQLAATTSASA*
Ga0075017_1008705651	3300006059	Watersheds	VAADLYGRHFIRVLRHPTQYWGWLSLFTVLIFGLITAGILINRRLATVSAG*
Ga0075015_1000908554	3300006102	Watersheds	FIAIIADHYGRHFIRVLRHPAQYWGWLLLFAAVMFGLIMAGIVLNKQLAATTSASA*
Ga0075030_1007115801	3300006162	Watersheds	LYGRHFIRVLRHPVQYWGWFLLFAVLTIGLIATGILINRRIAGLAG*
Ga0066659_100988431	3300006797	Soil	AIVADHYGRHFIRALRQPSQYWGWLLLFAAVIFSLIIAGIAVNRRLAATTSA*
Ga0075435_1006648052	3300007076	Populus Rhizosphere	VTICRAARYGIIAVIADHYGRNFIRALRQPGQYWGWLLLFAAVIFSLIIAGILLNRRLAATTSA*
Ga0066710_1048423622	3300009012	Grasslands Soil	AIVADHYGRHFIRALRQPGQYWGWLLLFAAVIFSLIIAGIAVNRRLAATTSA
Ga0066709_1024913781	3300009137	Grasslands Soil	AIVADHYGRHFIRALRQPSQYWGWLLLFAAVIFSLIIAGIAVNRRLPATTSA*
Ga0116225_10265201	3300009524	Peatlands Soil	IAIVADHYGRHFVRALRHPTQYWGWMLLFAALIVGLVVGGILLNRRLETAPA*
Ga0116225_10469843	3300009524	Peatlands Soil	VTICRGARYAFIAIIADHYGRHFIRVLRHPAQYWGWLLLFAAVIFSLIMVGIVLNRRLTVTTL*
Ga0116123_10535831	3300009617	Peatland	IIADHYGRHFIRVLRHPIQYWGWFLLFAAVILTVILAGITVNKRLVAATTA*
Ga0116124_11646382	3300009634	Peatland	GARYAFIAIITDHYGRHFIRVLRHPAQHWGWLLLFAAVIFSLIMVGVVLNRRLAATTSA*
Ga0116112_11758812	3300009636	Peatland	VVTICRAARYTLVAIIADHYGRHFVRVLRHPTEYWGWLIAFAAVILLVIMAGIVVNKRLSAAAVA*
Ga0116122_10550692	3300009639	Peatland	GARYTLVAIIADHYGRHFVRVLRHPVQYWGWLLLFAAIILSVILAGVMLNKRLAATTTA*
Ga0116122_11043982	3300009639	Peatland	TGRLLICRSARYTFIAIVADHYGRHFVRVLRHPSQYWGWLLLFAAVIFSLIMAGILLNRRLTAATTA*
Ga0116120_11545861	3300009641	Peatland	IADHYGRHFVRVLRHPTEYWGWLIAFAAVILLVIMAGIVVNKRLSAAAVA*
Ga0116110_10683021	3300009643	Peatland	DHYGRHFIRVLRHPAQHWGWLLLFAAVIFSLIMAGIVLNRRLTTTTSA*
Ga0116106_10823862	3300009645	Peatland	IIADHYGRHFIRVLRHPIEYWGWLLAFAAVILILIMTGVVVNRRLAAATMA*
Ga0116106_11879691	3300009645	Peatland	LVALVADHYGRHFLRILLHPTQHWGWLLLFAAIILSVILAGVMLNKRLAATTTA*
Ga0116215_11377982	3300009672	Peatlands Soil	TICRGARYAFIAIIADHYGRHFIRVLRHPAQYWGWLLLFAAVIFSLIMVGIVLNRRLTVTTL*
Ga0116134_10915021	3300009764	Peatland	RHFIRVLRHPAQHWGWLLLFAAVIFSLIMAGIVLNRRLTTTTSA*
Ga0134082_101609463	3300010303	Grasslands Soil	AIVADHYGRHFIRALRQPSQYWGWLLLFAAVIFSLIIAGIAVNRRLVATTSA*
Ga0134088_103035261	3300010304	Grasslands Soil	GIIAIVADHYGRHFIRALRQPGQYWGWLLLFAAVIFSLIIVGIAVNRRLAATTSA*
Ga0134064_100257253	3300010325	Grasslands Soil	VTICRAARYGIIAIVADHYGRHFIRALRQPSQYWGWLLLFAAVIFSLIIAGIAVNRRLVATTSA*
Ga0105239_110477772	3300010375	Corn Rhizosphere	AARYAVIAIVAEHYGRHFIRMFRHPTQYWGWLLLLAAMIFFLIAGGILINRRLANSPAE*
Ga0137365_101193762	3300012201	Vadose Zone Soil	VTICRAARYGIIAIVADHYGRHFIRALRQPSQYWGWLLLFAAVIFSLIIAGILLNRRLAATTSA*
Ga0137376_104181421	3300012208	Vadose Zone Soil	HYGRHFIRALRQPSQYWGWLLLFAAVIFSLIIAGIAVNRRLPATTSA*
Ga0137377_112220812	3300012211	Vadose Zone Soil	VTVCRGARYAFIAIIADHYGRHFIRVLRQPGQYWGWLLLFAAVIFSLIIAGIAVNRRLAATTSA*
Ga0137404_110471921	3300012929	Vadose Zone Soil	RYGITAIVADHYGRHFIRALRQPGQYWGWLLLFAAVIFSLIIAGIAVNRRLAATTSA*
Ga0137404_116419651	3300012929	Vadose Zone Soil	IIADHYGRHFIRVLRHPAQYWGWSLVLAAVIFSLIMGGIAVNKRFAAA*
Ga0120111_10138403	3300013764	Permafrost	VVTICRGARYAFIAVIADHYGRHFIRFLRQPAPYWGWLLLFAAVIFGLIMGGIALNRRLATATSA*
Ga0120109_10135392	3300014052	Permafrost	VIICRSARYTFIAIVADHYGRHFVRVLRHPSQYWGWLLLFAAVIFSLIMAGILLN*
Ga0181524_104149172	3300014155	Bog	AIIADHYGRHFIRVLRHPAQHWGWLLLVAAVIFSLIMAGIVLNRRLAATTSA*
Ga0181529_101565881	3300014161	Bog	VAIVADHYGRHFIRVLRHPVQYWGWLLLFAAIILCVILAGILISRRFAATATA*
Ga0181529_102964222	3300014161	Bog	AIIADHYGRHFIRVLRHPIEYWGWLLAFAAVILILIMTGVVVNRRLAAATMA*
Ga0182018_1000595816	3300014489	Palsa	FIAIVADHYGRHFVRVLRHPSQYWGWLLLFAAVIFSLIMAGILLNRRLTAATTA*
Ga0182018_103606132	3300014489	Palsa	HYGRHFVRVLRHPSQYWGWLLLFAAVIFSLIMAGILLNRRLTVANIG*
Ga0182018_107401692	3300014489	Palsa	AIVADHYGRHFVRVLRHPSQYWGWLLLFAAVIFSLIIAGILLNRRLTAATTA*
Ga0182013_103730712	3300014492	Bog	ADHYGRHIVRVLRHPVQYWGWLLLFAALILSVIMAGVMLNRRLAATTAA*
Ga0181516_101059491	3300014655	Bog	TICRAARYTLVAIVADHYGRHFIRVLRHPVQYWGWLLLFAAIILCVILAGILISRRFAATATA*
Ga0181516_102002752	3300014655	Bog	HYGRHFIRVLSHPTQYWGWLLVFAAVILAVILAGIVLNKRLAAATTA*
Ga0181522_109448902	3300014657	Bog	YTLIAIIADHYGRHFIRVLRHPIEYWGWLLAFAAVILILIMTGVVVNRRLAAATMA*
Ga0181522_110051091	3300014657	Bog	HYGRHFIRALRHPDQYWGWLLLFAAVVLSLIMGGIELNRRLTATTPA*
Ga0134089_104253051	3300015358	Grasslands Soil	IAIVADHYGRHFIRALRQPGQYWGWLLLFAAVIFSLIIVGIAVNRRLAATTSA*
Ga0181505_106882981	3300016750	Peatland	TICRGARYTLVAIIADHYGRHFVRVLRHPTEYWGWLIAFAAVILLVIMAGIVVNKRLSAAAVA
Ga0187877_10535711	3300017931	Peatland	AICRGARYTLIAIIADHYGRHFTRVLRHPIEYWGWLLAFAAVILILIMTGVVVNRRLAAATMA
Ga0187877_10730435	3300017931	Peatland	FIAIIADHYGRHFIRVLRHPAQHWGWLLLFAAVIFSLIMAGIVLNRRLAATTSA
Ga0187848_103191491	3300017935	Peatland	AIIADHYGRHFIRVLRHPSQYWGWLLLSAAVILGLVAAGIVINRRLVVPAGA
Ga0187821_102969352	3300017936	Freshwater Sediment	TVITLCRGARYSLIAIIADHYGRHFIRALRHPTQYWGWLLLFASLGIGLTVAAFMVNRRLSTVAN
Ga0187853_103464161	3300017940	Peatland	IIADHYGRHFVRVLRHPVQYWGWLLLFAAIILSVILAGVMLNKRLAATTAA
Ga0187817_101332161	3300017955	Freshwater Sediment	TICRGARYGVIAIIADHYGRHFIRVLRHPAQYWGWSLLFAAVIASLLIAGIALNRRLAATTTA
Ga0187767_101503131	3300017999	Tropical Peatland	VIAVVADHYGRHFIRALRHPIQYWGWLALFAAIILGLVGAGILINRRLETLSAAPTRVSA
Ga0187804_103665453	3300018006	Freshwater Sediment	VAVVADLYGRHFIRVLRHPTQYWGWSLLFAMMIVGFIATGILVNRRLATASAA
Ga0187884_103171041	3300018009	Peatland	IADHYVRHFIRVLQHPAKYWGWLLVFATLILSVILAGVMLNKRLAATTAA
Ga0187810_101697602	3300018012	Freshwater Sediment	VVTICRGARYGVIAIIADHYGRHFIRVLRHPAQYWGWSLLFAAILFSLIIGGITLNRRLAATTTA
Ga0187810_105229461	3300018012	Freshwater Sediment	IIADLYGRHFIRMLRHPVQYWGWFLAFAALAIGLIAGGILINRRITSEPAG
Ga0187810_105384462	3300018012	Freshwater Sediment	RGLRYSLVAIIADHYGRHFIRVLRHPIQYWGWLLVFAAVILTVILAGITVNKRLLAATTA
Ga0187873_13697432	3300018013	Peatland	DHYGRHFIRVLRHPAQHWGWLLLFAAVIFSLIMAGIVLNRRLTTTTSA
Ga0187857_101226761	3300018026	Peatland	IITDHYGRHFIRVLRHPIEYWGWLLAFAAVILILIMTGVVVNRRLAAATMA
Ga0187867_103072062	3300018033	Peatland	YGRHFIRVLRHPIEYWGWLLAFAAVILILIMTGVVVNRRLAAATMA
Ga0187883_102299252	3300018037	Peatland	VAIIADHYGRHFIRVLRHPIQYWGWLLLFAAIILAVIWAGIVLNKRLAAETTV
Ga0187887_100519961	3300018043	Peatland	TLVAIIADHYGRHFIRVLQHPAKYWGWLLVFATLILSVILAGVMLNKRLAATTAA
Ga0187887_102485243	3300018043	Peatland	VAIVADHYGRHFIRVLRHPVQYWGWLLLFAAIILCVILAGILISRRFAATATA
Ga0187859_100402151	3300018047	Peatland	RTLRYSFIAIIADHYGRHFIRVLRHPSQYWGWLLLSAAVILGLVAAGIVINRRLVVPAGA
Ga0187784_104538061	3300018062	Tropical Peatland	DHYGRHFVRVLRHPAQEWEWLILFAAVIFTFTMAGIRLNRRMATA
Ga0066655_102419111	3300018431	Grasslands Soil	TICRAARYGIIAIVADHYGRHFICALRQPGQYWGWLLLFAAVIFSLIIVGIAVNRRLAATTSA
Ga0066662_105850791	3300018468	Grasslands Soil	ICRAARYGIIAIVADHYGRHFIRALRQPSQYWGWLLLFAAVIFSLIIAGIAVNRRLPATTSA
Ga0066662_115430821	3300018468	Grasslands Soil	RYGIIAIVADHYGRHFIRALRQPGQYWGWLLLFAAVIFSLIIVGIAVNRRLAATTSA
Ga0193726_12460872	3300020021	Soil	ALALVADRYGRRFLGILRHPTQYWGWLLLFAVFTVAVIAAGILFNRRLSSVPANS
Ga0210403_111389802	3300020580	Soil	IVADHYGRHFVRMFRHPTQYWGWLLLFTAMIFGLIAGGILINRRLATSAAGSTTIEPRATEL
Ga0210388_110889362	3300021181	Soil	ADLYGRHFIRVIRHPLQYWGWLLVFAAIVFGLIVAGILINRRIAASAG
Ga0210393_112894242	3300021401	Soil	IAIVADLYGRHFIRVLRHPTQYWGWLLLFAVVTAGLIGGGILINRRLETAAG
Ga0210385_110341432	3300021402	Soil	AIGIVADLYGRHFIRVISHPLQYWGWLLLFAAITLALIAGGILINRRIAAAEAG
Ga0210384_112807942	3300021432	Soil	RYAAIGIIADLYGRHFIRVLRHPTQYWGWLLLFTAMIFGFIAGGILINRRLATASAT
Ga0208690_10112982	3300025434	Peatland	RGARYTLIAIIADHYGRHFIRVLRHPIEYWGWLLAFAAVILILIMTGVVVNRRLAAATMA
Ga0208039_10716832	3300025454	Peatland	TDHYGRHFIRVLRHPAQHWGWLLLFAAVIFSLIMVGVVLNRRLAATTSA
Ga0208192_10819162	3300025477	Peatland	ITDHYGRHFIRVLRHPAQHWGWLLLFAAVIFSLIMVGVVLNRRLAATTSA
Ga0208191_10821241	3300025496	Peatland	SARYTFIAIVADHYGRHFVRVLRHPSQYWGWLLLFAAVIFSLIMAGILLNRRLTAATTA
Ga0208819_10722052	3300025498	Peatland	DHYGRHFIRVLRHPAQHWGWLLLFAAVIFSLIMAGIVLNRRLAATTSA
Ga0209235_11436083	3300026296	Grasslands Soil	VTICRAARYGIIAIIADHYGRHFVRVLRHPSQYWGWLLLFAAVIFSLIIAGIAVNRRLPATTSA
Ga0209236_10931423	3300026298	Grasslands Soil	AARYGIIAIVADHYGRHFIRALRQPGQYWGWLLLFAAVIFSLIIAGIAVNRRLAATTSA
Ga0209802_10223721	3300026328	Soil	IAIVADHYGRHFIRALRQPSQYWGWLLLFAAVIFSLIIAGIAVNRRLVATTSA
Ga0209375_11757021	3300026329	Soil	IVADHYGRHFIRALRQPSQYWGWLLLFAAVIFSLIIAGIAVNRRLAATTSA
Ga0255351_10839871	3300026456	Soil	RYTLVALIADHYGRHIVRVLRHPVQYWGWLLLFAALILSVILVGVMLNKRLAATTAA
Ga0209157_11317301	3300026537	Soil	CRAARYGIIAIVADHYGRHFIRALRQPGQYWGWLLLFAAVIFSLIIVGIAVNRRLAATTS
Ga0209056_1000864614	3300026538	Soil	IIAVVADHYGRHFIRALRQPSQYWGWLLLFAAVIFSLIIAGIAVNRRLPATTSA
Ga0209156_102704561	3300026547	Soil	IVADHYGRHFIRALRQPSQYWGWLLLFAAVIFSLIIAGIAVNRRLPATTSA
Ga0209161_1000469417	3300026548	Soil	IAIVADHYGRHFIRALRQPSQYWGWLLLFAAVIFSLIIAGIAVNRRLPATTSA
Ga0207777_10345901	3300027330	Tropical Forest Soil	IVADHYGRHFIRVLRHPSQYWGWFAALIVLLVVLIVAGFLVNRQLEPVAAE
Ga0209221_11455371	3300027609	Forest Soil	LIAVVADHYGRRFVRILRHPSQYWVWLLLFAAIVLTLVLAGVVLNRRFAAAASA
Ga0209517_102377201	3300027854	Peatlands Soil	LVAIIADHYGRHFIRVLRHPIQYWGWFLLFAAVILTVILAGITVNKRLAAATTA
Ga0209167_101423222	3300027867	Surface Soil	VAICRGARYTLIAFIADHYGRHFVRVLRHPTEYWGWLLAFAAIIAAVIMAGIVVNKRIAAAAMA
Ga0209590_104816782	3300027882	Vadose Zone Soil	GRHFVRVLRHPSQYWGWLLLFAAVIFSLIMAGIVLNRRLSATTSA
Ga0265356_10301291	3300028017	Rhizosphere	ICRSVRYTFIAIVADHYGHHFVRVLRHPSQYWGWLLLFVAVIFSLIIAGILLNRRLTAANIV
Ga0209526_105106852	3300028047	Forest Soil	CRTARYAVIAIVADHYGRHFIRMLRHPTQYWGWLLLFAAMIFGLIAGGILINKRLANSSA
Ga0255358_10368742	3300028069	Soil	RYAFIAIIADHYGRHFIRALRHPAQHWGWLLLFAAVIFSLIMAGIVLNRRLAATTSA
Ga0222749_100140051	3300029636	Soil	ARYATIAIAADLYGRHFILVLRHPTQYWGWFSLFAALIAGLIAAGILINRRLLLYRR
Ga0311359_106090442	3300029914	Bog	IIADHYGRHIVRVLRHPVQYWGWLLLFAALILSVIMAGVMLNKRLAATTAA
Ga0311359_106501521	3300029914	Bog	IIADHYGRHIVRVLRHPVQYWGWLLLFAALILSVIMAGVMLNRRLAATTAA
Ga0302141_10533271	3300029919	Bog	RGARYTLVAIIADHYGRHIVRVLRHPVQYWGWLLLFAALILSVIMAGVMLNKRLAATTAA
Ga0302179_104110433	3300030058	Palsa	IIADHYGRHFVRALRHPSQYWGWLLLAATVILSLVMAGIVLNRRLATTTSA
Ga0311353_108247132	3300030399	Palsa	IAIVADHYGRHFVRVLRHPSQYWGWLLLFAAVIFSLIMAGILLNRRLTAANIG
Ga0311372_121109491	3300030520	Palsa	SLYGRRFIGVLRHPTQYWGWLLLFAALTAGLIGGGILINRRLETAAG
Ga0311354_107947261	3300030618	Palsa	TFIAIVADHYGRHFVRVLRHPSQYWGWLLLFAAVIFSLIMAGILLNRRLTAANIG
Ga0302316_104204511	3300030646	Palsa	IAIVADHYGRHFVRVLRHPSQYWGWLLLFAAVIFSLIMAGILLNRRLTAATTA
Ga0310038_104245311	3300030707	Peatlands Soil	ISRAIRYSAIAIVADHYGRHFVRALRHPTQYWGWMLLFAALIVGLVVGGILLNRRLETAP
Ga0302325_100048931	3300031234	Palsa	YGRHFVRVLRHPSQYWGWLLLFAAVIFSLIMAGILLNRRLTAANIG
Ga0302326_130302732	3300031525	Palsa	RHFVRVLRHPSQYWGWLLLFAAVIFSLIMAGILLNRRLTAANIG
Ga0310686_1109171551	3300031708	Soil	GVRYCAIGLVADRYGRSVIGVLRHPTQYWGWLLLFAAIILVLVGAGILFNKRLAAAPGH
Ga0265342_100410693	3300031712	Rhizosphere	IADHYGRHFIGVLRHPVQYWGWLLAFAAVILVVIMAGILVNRRLAAESMA
Ga0307476_106910862	3300031715	Hardwood Forest Soil	VADIYGRHFIRVLRHPSQYWGWLTLFIVLAIGLTLTGILLNRRLATATN
Ga0307477_101788082	3300031753	Hardwood Forest Soil	VADHYGRHFIRALRHPTQFWGWWLLLAGLAFTMITAGVLLNRRLSAASAA
Ga0307473_114143952	3300031820	Hardwood Forest Soil	ARYATIAIAADLYGRHLILVLRHPTQYWGWLSLFAAMIFALIAGGILINKRLATMSAE
Ga0307478_112463892	3300031823	Hardwood Forest Soil	RYSVIAIIADLYGRHFIRVLLHPVQYWGWFLAFAVLTIGLITGGILINRRIGAEPAG
Ga0311301_102934511	3300032160	Peatlands Soil	DHYGRHFVRVLRHPSQYWGWLLLFAAIILTLILTGIALNRRFAAATSA
Ga0310812_104981781	3300032421	Soil	RAARYGVVAIIADHYGRHFIRALRHPVQYWGWLLLFAAVLFSLITGGIMLNRRLAATTRA
Ga0335085_105537762	3300032770	Soil	TLVALLADRFGRHIIRVLLHPAQYWGWFLLFAALICGVVLAGILLNKRIVNAAA
Ga0335078_103885311	3300032805	Soil	AIVADLYGRHFIRVLRHPTQYWGWLLVFAAMVFGLTTAGILINKRLAAASAG
Ga0371488_0030350_3_191	3300033983	Peat Soil	ICRGARYTLVAIVADHYGRHFVRVLRHPTQYWGWLLLFAALILGVILAGIAINRRIAATASS
Ga0326724_0527727_1_171	3300034091	Peat Soil	YTLVAIIADHYGRHFIRVLRHPVQYWGWLLLFAAVILSVILAGIVVNKRIAAATAA
Ga0370514_012315_23_214	3300034199	Untreated Peat Soil	MICRSARYTSIAIVADHYGRHFVRVLRHPSQYWGWLLLFAAVIFSLIMAGILLNRRLTAATTA
Ga0370492_0440098_327_527	3300034282	Untreated Peat Soil	TVVTICRGARYTLVAIIADHYGRHIVRVLRHPVQYWGWLLLFAALILSVIMAGVMLNRRLAATTAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F058009

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences