Metagenome / Metatranscriptome Family F058006

Basic Information
Family ID	F058006
Family Type	Metagenome / Metatranscriptome
Number of Sequences	135
Average Sequence Length	45 residues
Representative Sequence	DEARFIPIWELGFLCASGPRAAVSGLSLIPLFAYSGPYEDVQLKS
Number of Associated Samples	106
Number of Associated Scaffolds	135

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	5.19 %
% of genes near scaffold ends (potentially truncated)	93.33 %
% of genes from short scaffolds (< 2000 bps)	94.07 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.17

Most Common Taxonomy
Group	Bacteria (77.037 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (17.037 % of family members)
Environment Ontology (ENVO)	Unclassified (25.926 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (38.519 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 5.48% β-sheet: 0.00% Coil/Unstructured: 94.52%
Feature Viewer

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Pfam ID	Name	% Frequency in 135 Family Scaffolds
PF00496	SBP_bac_5	22.96
PF01804	Penicil_amidase	3.70
PF13436	Gly-zipper_OmpA	3.70
PF00528	BPD_transp_1	2.96
PF03972	MmgE_PrpD	2.22
PF00884	Sulfatase	2.22
PF13191	AAA_16	1.48
PF00903	Glyoxalase	1.48
PF01738	DLH	1.48
PF02954	HTH_8	1.48
PF13424	TPR_12	0.74
PF01610	DDE_Tnp_ISL3	0.74
PF11969	DcpS_C	0.74
PF13649	Methyltransf_25	0.74
PF08814	XisH	0.74
PF00069	Pkinase	0.74
PF02335	Cytochrom_C552	0.74
PF03400	DDE_Tnp_IS1	0.74
PF03928	HbpS-like	0.74
PF16864	Dimerisation2	0.74
PF05685	Uma2	0.74
PF04909	Amidohydro_2	0.74
PF13416	SBP_bac_8	0.74
PF00239	Resolvase	0.74
PF14106	DUF4279	0.74
PF07715	Plug	0.74
PF05199	GMC_oxred_C	0.74
PF07978	NIPSNAP	0.74
PF01209	Ubie_methyltran	0.74
PF01042	Ribonuc_L-PSP	0.74
PF02775	TPP_enzyme_C	0.74
PF12399	BCA_ABC_TP_C	0.74

COG ID	Name	Functional Category	% Frequency in 135 Family Scaffolds
COG2366	Acyl-homoserine lactone (AHL) acylase PvdQ	Secondary metabolites biosynthesis, transport and catabolism [Q]	3.70
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	2.96
COG2079	2-methylcitrate dehydratase PrpD	Carbohydrate transport and metabolism [G]	2.22
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.74
COG1662	Transposase and inactivated derivatives, IS1 family	Mobilome: prophages, transposons [X]	0.74
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.74
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.74
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	0.74
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.74
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.74
COG3303	Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit	Inorganic ion transport and metabolism [P]	0.74
COG3464	Transposase	Mobilome: prophages, transposons [X]	0.74
COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	General function prediction only [R]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	77.04 %
Unclassified	root	N/A	22.96 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	77.04 %
Unclassified	root	N/A	22.96 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	77.04 %
Unclassified	root	N/A	22.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	17.04 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.22 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.96 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	1.48 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.48 %
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	0.74 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.96 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	11.11 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	2.96 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.48 %
Candidatus Tectomicrobia	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia	0.74 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.74 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.74 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.74 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.74 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.74 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.74 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.74 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.96 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	5.93 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	2.96 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.48 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.48 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.74 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.74 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.74 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.74 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.74 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.74 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.74 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	0.74 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.74 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.96 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	4.44 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	2.96 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.48 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.74 %
Synechococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	0.74 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.74 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.74 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	0.74 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.74 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.74 %
Stappiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae	0.74 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.74 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.74 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.74 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.96 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	4.44 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	2.96 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.48 %
Merismopediaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Merismopediaceae	0.74 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.74 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.74 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	0.74 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.74 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.74 %
Stappia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae → Stappia	0.74 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.74 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.74 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.74 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.74 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.96 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	4.44 %
unclassified Planctomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae	2.96 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.48 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.74 %
unclassified Stappia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae → Stappia → unclassified Stappia	0.74 %
Synechocystis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Merismopediaceae → Synechocystis	0.74 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.74 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.74 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.74 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.74 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.74 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.74 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.74 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.74 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.96 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	4.44 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	2.96 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.48 %
Stappia sp. ES.058	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae → Stappia → unclassified Stappia → Stappia sp. ES.058	0.74 %
unclassified Synechocystis	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Merismopediaceae → Synechocystis → unclassified Synechocystis	0.74 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.74 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.74 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.74 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.74 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.74 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.74 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.74 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.74 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.74 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.96 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	4.44 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	2.96 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.48 %
Synechocystis sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Merismopediaceae → Synechocystis → unclassified Synechocystis → Synechocystis sp.	0.74 %
Stappia sp. ES.058	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae → Stappia → unclassified Stappia → Stappia sp. ES.058	0.74 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.74 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.74 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.74 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.74 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.74 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.74 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.74 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.74 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.74 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_100862381	Not Available	686	Open in IMG/M
3300003319\|soilL2_10110258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Merismopediaceae → Synechocystis → unclassified Synechocystis → Synechocystis sp.	1279	Open in IMG/M
3300003911\|JGI25405J52794_10007579	All Organisms → cellular organisms → Bacteria → Proteobacteria	2004	Open in IMG/M
3300004268\|Ga0066398_10230306	All Organisms → cellular organisms → Bacteria → Proteobacteria	500	Open in IMG/M
3300004798\|Ga0058859_11753068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	1353	Open in IMG/M
3300005093\|Ga0062594_102495501	Not Available	567	Open in IMG/M
3300005174\|Ga0066680_10431011	Not Available	835	Open in IMG/M
3300005332\|Ga0066388_103129885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	845	Open in IMG/M
3300005445\|Ga0070708_101354879	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300005446\|Ga0066686_10983031	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300005552\|Ga0066701_10082278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	1848	Open in IMG/M
3300005553\|Ga0066695_10271432	All Organisms → cellular organisms → Bacteria	1071	Open in IMG/M
3300005559\|Ga0066700_11118688	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300005575\|Ga0066702_10858356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	541	Open in IMG/M
3300005764\|Ga0066903_100149697	All Organisms → cellular organisms → Bacteria → Proteobacteria	3349	Open in IMG/M
3300005764\|Ga0066903_100696316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	1790	Open in IMG/M
3300005764\|Ga0066903_101483497	All Organisms → cellular organisms → Bacteria	1279	Open in IMG/M
3300005764\|Ga0066903_102341136	All Organisms → cellular organisms → Bacteria	1032	Open in IMG/M
3300005764\|Ga0066903_106604394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	604	Open in IMG/M
3300005836\|Ga0074470_11677658	All Organisms → cellular organisms → Bacteria → Proteobacteria	580	Open in IMG/M
3300005842\|Ga0068858_102408627	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300006797\|Ga0066659_11536229	Not Available	558	Open in IMG/M
3300006806\|Ga0079220_10204194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1144	Open in IMG/M
3300006845\|Ga0075421_100312419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	1908	Open in IMG/M
3300006845\|Ga0075421_100377678	All Organisms → cellular organisms → Bacteria	1707	Open in IMG/M
3300006845\|Ga0075421_100851234	All Organisms → cellular organisms → Bacteria	1045	Open in IMG/M
3300006845\|Ga0075421_102543544	Not Available	532	Open in IMG/M
3300006846\|Ga0075430_100729489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	817	Open in IMG/M
3300006852\|Ga0075433_10132984	All Organisms → cellular organisms → Bacteria	2210	Open in IMG/M
3300006853\|Ga0075420_100961472	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	735	Open in IMG/M
3300006880\|Ga0075429_100907171	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300006880\|Ga0075429_101128979	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300006969\|Ga0075419_11459162	Not Available	512	Open in IMG/M
3300007255\|Ga0099791_10644258	Not Available	520	Open in IMG/M
3300009081\|Ga0105098_10686722	Not Available	542	Open in IMG/M
3300009090\|Ga0099827_10432011	All Organisms → cellular organisms → Bacteria	1128	Open in IMG/M
3300009090\|Ga0099827_10657673	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	905	Open in IMG/M
3300009094\|Ga0111539_13157218	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300009100\|Ga0075418_11196029	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300009100\|Ga0075418_11898960	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300009100\|Ga0075418_12323437	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300009137\|Ga0066709_101445931	All Organisms → cellular organisms → Bacteria	996	Open in IMG/M
3300009137\|Ga0066709_104546797	Not Available	507	Open in IMG/M
3300009146\|Ga0105091_10274212	Not Available	818	Open in IMG/M
3300009147\|Ga0114129_10156456	All Organisms → cellular organisms → Bacteria → Proteobacteria	3116	Open in IMG/M
3300009147\|Ga0114129_12643314	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300009162\|Ga0075423_10354636	All Organisms → cellular organisms → Bacteria	1538	Open in IMG/M
3300009162\|Ga0075423_10900997	All Organisms → cellular organisms → Bacteria	938	Open in IMG/M
3300009162\|Ga0075423_13077246	Not Available	511	Open in IMG/M
3300009168\|Ga0105104_10349940	All Organisms → cellular organisms → Bacteria → Proteobacteria	817	Open in IMG/M
3300009168\|Ga0105104_10621556	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300009815\|Ga0105070_1050469	Not Available	770	Open in IMG/M
3300009822\|Ga0105066_1138467	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300010041\|Ga0126312_10149540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1620	Open in IMG/M
3300010043\|Ga0126380_11497337	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	597	Open in IMG/M
3300010046\|Ga0126384_10683590	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300010046\|Ga0126384_10725139	Not Available	883	Open in IMG/M
3300010046\|Ga0126384_10748537	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300010047\|Ga0126382_10529810	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300010047\|Ga0126382_11386584	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300010047\|Ga0126382_12392211	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300010047\|Ga0126382_12514631	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300010361\|Ga0126378_13343352	Not Available	509	Open in IMG/M
3300010362\|Ga0126377_11375786	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300010376\|Ga0126381_103964862	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300010391\|Ga0136847_11167244	All Organisms → cellular organisms → Bacteria	2232	Open in IMG/M
3300010398\|Ga0126383_11566212	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	748	Open in IMG/M
3300011333\|Ga0127502_10929703	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	562	Open in IMG/M
3300012022\|Ga0120191_10082638	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300012199\|Ga0137383_10849573	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300012199\|Ga0137383_10899214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	646	Open in IMG/M
3300012201\|Ga0137365_10292654	All Organisms → cellular organisms → Bacteria	1207	Open in IMG/M
3300012201\|Ga0137365_11345930	Not Available	505	Open in IMG/M
3300012202\|Ga0137363_10684535	Not Available	868	Open in IMG/M
3300012206\|Ga0137380_11493286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae → Stappia → unclassified Stappia → Stappia sp. ES.058	560	Open in IMG/M
3300012208\|Ga0137376_11646227	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300012353\|Ga0137367_10274159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1210	Open in IMG/M
3300012357\|Ga0137384_10948282	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300012362\|Ga0137361_10268130	All Organisms → cellular organisms → Bacteria	1558	Open in IMG/M
3300012362\|Ga0137361_11177926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	688	Open in IMG/M
3300012469\|Ga0150984_101869869	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300012532\|Ga0137373_10619854	Not Available	814	Open in IMG/M
3300012902\|Ga0157291_10129793	Not Available	725	Open in IMG/M
3300012923\|Ga0137359_10154482	All Organisms → cellular organisms → Bacteria	2046	Open in IMG/M
3300012925\|Ga0137419_11319059	Not Available	607	Open in IMG/M
3300012927\|Ga0137416_10140089	All Organisms → cellular organisms → Bacteria	1879	Open in IMG/M
3300012929\|Ga0137404_10342888	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	1306	Open in IMG/M
3300012971\|Ga0126369_10449293	All Organisms → cellular organisms → Bacteria	1338	Open in IMG/M
3300012971\|Ga0126369_11026590	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	913	Open in IMG/M
3300012971\|Ga0126369_11198819	Not Available	849	Open in IMG/M
3300012971\|Ga0126369_11917363	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300013308\|Ga0157375_10330092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1690	Open in IMG/M
3300014154\|Ga0134075_10288059	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	714	Open in IMG/M
3300017792\|Ga0163161_11816244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	542	Open in IMG/M
3300018078\|Ga0184612_10469151	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300018082\|Ga0184639_10284562	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	870	Open in IMG/M
3300019229\|Ga0180116_1320388	Not Available	508	Open in IMG/M
3300019233\|Ga0184645_1146461	Not Available	935	Open in IMG/M
3300019238\|Ga0180112_1357751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	914	Open in IMG/M
3300019254\|Ga0184641_1296764	Not Available	540	Open in IMG/M
3300019257\|Ga0180115_1206174	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300019259\|Ga0184646_1024763	All Organisms → cellular organisms → Bacteria	1087	Open in IMG/M
3300019279\|Ga0184642_1559956	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300019360\|Ga0187894_10302371	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300019789\|Ga0137408_1051632	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300019789\|Ga0137408_1196832	Not Available	511	Open in IMG/M
3300021307\|Ga0179585_1062219	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300025149\|Ga0209827_11395891	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300025961\|Ga0207712_10435777	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	1109	Open in IMG/M
3300027511\|Ga0209843_1023876	All Organisms → cellular organisms → Bacteria	1165	Open in IMG/M
3300027675\|Ga0209077_1243666	Not Available	500	Open in IMG/M
3300027846\|Ga0209180_10333686	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300027873\|Ga0209814_10300087	Not Available	699	Open in IMG/M
3300027909\|Ga0209382_10249147	All Organisms → cellular organisms → Bacteria	2017	Open in IMG/M
3300028792\|Ga0307504_10405930	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300028889\|Ga0247827_10915438	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300030006\|Ga0299907_11176017	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300030569\|Ga0247628_1221325	Not Available	552	Open in IMG/M
3300030608\|Ga0247651_10131632	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300030905\|Ga0308200_1082314	Not Available	658	Open in IMG/M
3300030993\|Ga0308190_1134224	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300031092\|Ga0308204_10157423	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	679	Open in IMG/M
3300031096\|Ga0308193_1018869	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300031421\|Ga0308194_10014918	All Organisms → cellular organisms → Bacteria	1592	Open in IMG/M
3300031880\|Ga0318544_10331988	Not Available	591	Open in IMG/M
3300031901\|Ga0307406_11569599	Not Available	581	Open in IMG/M
3300031903\|Ga0307407_11509101	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300031946\|Ga0310910_11424234	Not Available	533	Open in IMG/M
3300032005\|Ga0307411_11809147	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300034663\|Ga0314784_002346	All Organisms → cellular organisms → Bacteria	2111	Open in IMG/M
3300034663\|Ga0314784_029126	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300034665\|Ga0314787_018896	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300034667\|Ga0314792_009295	All Organisms → cellular organisms → Bacteria	1610	Open in IMG/M
3300034676\|Ga0314801_015210	All Organisms → cellular organisms → Bacteria	1244	Open in IMG/M
3300034681\|Ga0370546_074858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	560	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	77.04%
Host-Associated	Host-Associated	22.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	63.70%
Plants	Host-Associated → Plants	22.22%
Aquatic	Environmental → Aquatic	13.33%
Human	Host-Associated → Human	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	62.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.00%
Freshwater	Environmental → Aquatic → Freshwater	10.37%
Sediment	Environmental → Aquatic → Sediment	2.22%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.22%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.74%
Cave	Environmental → Terrestrial → Cave	0.74%
Digestive System	Host-Associated → Human → Digestive System	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	19.26%
Sediment	Environmental → Aquatic → Freshwater → Sediment	8.89%
Loam	Environmental → Terrestrial → Soil → Loam	5.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.22%
Sand	Environmental → Terrestrial → Soil → Sand	2.22%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.22%
Lake	Environmental → Aquatic → Freshwater → Lake	0.74%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.74%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.74%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.74%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.74%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	19.26%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	8.89%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.41%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.19%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.44%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.22%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.22%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.22%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.22%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.96%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.74%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.74%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	0.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.74%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.74%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	17.04%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	15.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.93%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	5.19%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.44%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	3.70%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	2.22%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.96%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.48%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.48%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.74%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.74%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	0.74%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.74%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.74%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.74%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.74%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.74%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.74%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.74%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004798	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009815	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10	Environmental	Open in IMG/M
3300009822	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011333	Cornfield soil microbial communities from Stanford, California, USA - CI-CA-CRN metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012022	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300019229	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_1_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019233	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019238	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT466_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019254	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019257	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019360	White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaG	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300021307	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025149	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP2 (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027511	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027675	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030569	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Bnb5 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030608	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Dnb4 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030905	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030993	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031096	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_194 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300034663	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034665	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034667	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034676	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034681	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_121 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.17
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.17
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F058006

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1008623812	3300000955	Soil	IWELGALHASGPRVAVSGLGLIPLFAWSGPYEDVQLKS*
soilL2_101102583	3300003319	Sugarcane Root And Bulk Soil	EARFMPIWENAFLCASGPRVAVSGLHRDSFAYSAPYEDVRLKSS*
JGI25405J52794_100075793	3300003911	Tabebuia Heterophylla Rhizosphere	LYDEALFMPIWELGFLCASGPRAAVSGLSLIPLFAYSGPYEDVQLKS*
Ga0066398_102303061	3300004268	Tropical Forest Soil	ERDQHVRRAVLYKIQQKLYDEVRFIPIWELGVLHASGPRVAVSGVGLIPLLLFSGPLEDVQLKS*
Ga0058859_117530681	3300004798	Host-Associated	KIQQNLYDEALFVPIWELGFLCASGPRAAVSGLSLIPLFAYSGPYEDVQLKS*
Ga0062594_1024955012	3300005093	Soil	IQQKAYDEVRFMPMWEPILPSASGPRVAVSGLNVKSFVYSAPYEDVQLSM*
Ga0066680_104310113	3300005174	Soil	RFIPIWELGGLHASGPRVAVSGVGLIPLFAWSGPYEDVQLKS*
Ga0066388_1031298852	3300005332	Tropical Forest Soil	QKRQALLYKIQQKAYDEALFMPIWENAFLCASGPRVAVSGLRSGLLVYSAPYEDVRLKSS
Ga0070708_1013548791	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	YDEVRFIPIWELGGLHASGPRVAVSGVGLIPLFAFSGPYEDVQLKS*
Ga0066686_109830311	3300005446	Soil	LYDEVRFLPIWDLGGLHASGPRVAVSGVGLIPMYAFSGPYEDVQLKA*
Ga0066701_100822782	3300005552	Soil	MQQKLYDEALFINIWELGFLCASGPRAAVSGLGMIPLFAYSGPYEDVQLKT*
Ga0066695_102714321	3300005553	Soil	GFLCASGPRAAVSGLSMIPLFAYSGPYEDVQLKS*
Ga0066700_111186881	3300005559	Soil	PIWDLGGLSASGPRVAVSGLGLIPLYAFSGPYEDVQLKS*
Ga0066702_108583561	3300005575	Soil	WQLGFLCVTGPRVAVSGLGLIPDYIYSAPYEEVRLKA*
Ga0066903_1001496971	3300005764	Tropical Forest Soil	RLYDEARFIPIWEQGVLHASGPRVAVSGLGLVPLLLFSGPLEDVQLKP*
Ga0066903_1006963161	3300005764	Tropical Forest Soil	LFVPLWELGFLCASGPRAAVSGLSLIPLFAYSGPYEDVQLKS*
Ga0066903_1014834971	3300005764	Tropical Forest Soil	AFLCASGPRVAVSGLHRDSFAYSAPYEDVQLKSA*
Ga0066903_1023411361	3300005764	Tropical Forest Soil	KIQQKLYDEARFMTIWDHGFLCASGPRAAVSGLSLIPLFSYSGPYEDVQLKS*
Ga0066903_1066043941	3300005764	Tropical Forest Soil	WQLGFLCVTGPRVAVSGLGLIPDYIYSAPYEDVRLQA*
Ga0074470_116776582	3300005836	Sediment (Intertidal)	VLSKIQQKLHDEALLIPMWELGFLCASGPRAAISGLSRIPLFAYSGPYEEVQLKS*
Ga0068858_1024086271	3300005842	Switchgrass Rhizosphere	DEVRVLPIWEQGVLNASGPRVAVSGVGLIPLFLFSGPYEDVQVKS*
Ga0066659_115362291	3300006797	Soil	LYEEVRFLTIWEFTTLCASGPRVAVSGLGLIPLCSYSSPYEDVQLKS*
Ga0079220_102041942	3300006806	Agricultural Soil	ELGVLHASGPRVAVSGLGLIPLLLFSGPLEDVQLRS*
Ga0075421_1003124191	3300006845	Populus Rhizosphere	WQLGFLCVTGPRVAVSGLGLIPDYIYSAPYEDVQVKA*
Ga0075421_1003776783	3300006845	Populus Rhizosphere	IQQKVYDEAYVAPFWELGFLCASGPRAAVSGLGLIPLFAYSAPLEEVRLKS*
Ga0075421_1008512342	3300006845	Populus Rhizosphere	QKRLATLQNIQQKLYEEARLMPIWELGFLCASGPRVAISGLGQIPLFAYSGPYEDVQVKS
Ga0075421_1025435441	3300006845	Populus Rhizosphere	QQKLYDEVRFLPIWELGALHASGPRVGVSGLGLIPLFAWSGPYEDVQLKS*
Ga0075430_1007294891	3300006846	Populus Rhizosphere	MEVRFILIWDLGALHASGPRVAVSGVGLIPLFAWSGPYEDVQLKS*
Ga0075433_101329841	3300006852	Populus Rhizosphere	GFLCVTGPRVAVSGLGLIPDYIYSAPYEDVQVKA*
Ga0075420_1009614722	3300006853	Populus Rhizosphere	HTHRRALLYQIQQKLYDEARFLPIWEGGVLHASGPRVAVSGLGLIPMFHFSGPLEAVQVKS*
Ga0075429_1009071712	3300006880	Populus Rhizosphere	KLYEEARFMPIWELGFLCASGPRVAISGLGQIPLFAYSGPYEDVQVKS*
Ga0075429_1011289791	3300006880	Populus Rhizosphere	PIWEQGVLNASGPRVAVSGVGLIPLFLFSGPYEDVQVKL*
Ga0075419_114591621	3300006969	Populus Rhizosphere	KAYDEALFMPIWENAFLCASGPRVAVSGLQGDSFAYSAPYEDVRLTSS*
Ga0099791_106442581	3300007255	Vadose Zone Soil	PILNASGPRVAVSGLGLIPLHGFSAPYEDVQLKP*
Ga0105098_106867221	3300009081	Freshwater Sediment	QKVYDEARLMPIWENAFLCVSGPRVAVSGLHADSFAYSAPYEDVRLKSS*
Ga0099827_104320112	3300009090	Vadose Zone Soil	MPVWENAFLCASGPRVAVSGLRSGLLVYSAPYEDVRLKSS*
Ga0099827_106576731	3300009090	Vadose Zone Soil	EARFMPIWEHCFLCASGPRAAVSGLSLIPLFAYSGPYEDVQVKS*
Ga0111539_131572182	3300009094	Populus Rhizosphere	ITIWQLGFLCASGPRAAVSGLGLIPLFAYSGPYEDLQLKA*
Ga0075418_111960292	3300009100	Populus Rhizosphere	YDEALFMPIWENAFLCASGPRVAVSGLRSGLLVYSAPYEDVQLKSS*
Ga0075418_118989602	3300009100	Populus Rhizosphere	WELGFLCASGPRAAVSGLSLIPLFAYSGPYEDVQVKS*
Ga0075418_123234372	3300009100	Populus Rhizosphere	QQKLYDEVRFLPIWELGALHASGPRVAVSGLGLIPLFAWSGPYEDVQLKS*
Ga0066709_1014459312	3300009137	Grasslands Soil	GFLCVTGPRVAVSGLGLIPDYIYSAPYEDVRLKA*
Ga0066709_1045467972	3300009137	Grasslands Soil	KGLLQKSHQIAYDDARFLPIWCNGFLCSSGPRVAVSGLHRDSFAYSGPYEGVQLKSA*
Ga0105091_102742121	3300009146	Freshwater Sediment	KVYDEARLMPIWENAFLCVSGPRVAVSGLHADSFAYSAPYEDVRLKSS*
Ga0114129_101564562	3300009147	Populus Rhizosphere	MPIWENAFLCASGPRVAVSGLRSGLLVYSAPYEDVQLKTS*
Ga0114129_126433142	3300009147	Populus Rhizosphere	AMFLSMWELGFLCASGPRAAVSGLSLIPLFAYSGPYEDVQLKS*
Ga0075423_103546362	3300009162	Populus Rhizosphere	QLGFLCVTGPRVAVSGLGLIPDYIYSAPYEDVRLKA*
Ga0075423_109009972	3300009162	Populus Rhizosphere	DEARFIPMWELGFLSASGPRVAVSGIGLIRLHLYSAPFEDVQLKS*
Ga0075423_130772462	3300009162	Populus Rhizosphere	KLYDEVRFLPIWELGALHASGPRVGVSGLGLIPLFAWSGPYEDVQLKS*
Ga0105104_103499401	3300009168	Freshwater Sediment	GGVLHASGPRVVVSGLGLIPMFHFSGPLEAVQVKS*
Ga0105104_106215561	3300009168	Freshwater Sediment	KLYDEARFIPIWELGFLCASGPRAAVSGMGVIPTFAYSGPYEDVQLKS*
Ga0105070_10504692	3300009815	Groundwater Sand	FTVLHASGPRVAVSGLGLIPLFAFSGPYEDVQLKS*
Ga0105066_11384671	3300009822	Groundwater Sand	RQDLLYKIQQKLYDEARFMPIWEHCFLCASGPRAAVSGLSLIPLFAYSGPYEDVQVKS*
Ga0126312_101495401	3300010041	Serpentine Soil	KIQQKVYDEALFIPIFELGFLCASGPRMAVSGLGLIPAYIYSGPFEEVRLKG*
Ga0126380_114973371	3300010043	Tropical Forest Soil	LHKIQRKVYDESLFIPIFELGFLCATGPRVAVSGLGLIPAYIYSGPFEEVRLKG*
Ga0126384_106835901	3300010046	Tropical Forest Soil	ELGFLCASGPRATVSGLSLIPLFAYSGPYEDVQLKS*
Ga0126384_107251391	3300010046	Tropical Forest Soil	EVRFIPIWELGGLHASGPRVAVSGVGLIPLFAFSGPYEDVQLKS*
Ga0126384_107485371	3300010046	Tropical Forest Soil	RDHRVRQAVLYQIQQKLYDEVRFIPIWELGVLHASGPRVAVSGLGLIPQLLFSGPLEDVQLKS*
Ga0126382_105298101	3300010047	Tropical Forest Soil	QALLYKIQQKAYDEALFMPIWENAFLCASGPRVAVSGLRSGLLVYSAPYEDAQLKTS*
Ga0126382_113865841	3300010047	Tropical Forest Soil	IWELGFLCASGPRAAVSGLGMIPLFAYSGPYEDVQLKS*
Ga0126382_123922111	3300010047	Tropical Forest Soil	LEAPILTASGPRVAVSGLGLIPSMAFPAPYEDVQLKP*
Ga0126382_125146311	3300010047	Tropical Forest Soil	KIQQKVYDEAYFIPLWELGFLCASGPRVAVSGLGIIPLHVYSGPYEEIQLKS*
Ga0126378_133433521	3300010361	Tropical Forest Soil	SFLCASGPRVAVSGLSLIPLFAYSGPYEEVRLKS*
Ga0126377_113757862	3300010362	Tropical Forest Soil	RKKREELLYKIQQKVYDEAYFMPLWELGFLCASGPRVAVSGLGLIPLFAYSGPYEDVQLK
Ga0126381_1039648621	3300010376	Tropical Forest Soil	KAYDDARFMPIWESAFLCASGPRVAVSGLHRDSFAYSAPYEDVQLKSS*
Ga0136847_111672445	3300010391	Freshwater Sediment	WEHCFLCASGPRAAVSGLSLIPLFAYSGPYEDVQVKS*
Ga0126383_115662121	3300010398	Tropical Forest Soil	LYDEGRFLPLLETTNLNASGPRVAVSGLGMIPSLFFSAPYEDVQLKP*
Ga0127502_109297032	3300011333	Soil	GFLCASGPRAAVSGLGLIPLFAYSAPLEEVRLKS*
Ga0120191_100826382	3300012022	Terrestrial	LYDEVRFIPIWDLGGLHASGPRVAVSGIGLIPLFAFSGPYEDVQLKS*
Ga0137383_108495732	3300012199	Vadose Zone Soil	LYDEVCFIPIWDLGGLSASGPRVAVSGLGLIPLYAFSGPYEDVQLKS*
Ga0137383_108992142	3300012199	Vadose Zone Soil	MQQKLYDEALFINIWELGFLCASGPRAAVSGLGLIPLFAYSGPYEDVQLKT*
Ga0137365_102926541	3300012201	Vadose Zone Soil	LGGLHASGPRVAVSGVGLIPLFAWSGPYEDVQLKS*
Ga0137365_113459302	3300012201	Vadose Zone Soil	QQKLYDEARFIPIWELSFLCASGPRVAVSGLSLIPLFAYSGPYEEVRLKS*
Ga0137363_106845352	3300012202	Vadose Zone Soil	AFLCATGPRVAVSGLGLIPGYIYSAPYEEVRLRS*
Ga0137380_114932861	3300012206	Vadose Zone Soil	KIQQKLYDEARFMPIWEHCFLCASGPRAVVSGLSLIPLFAYSGPYEDVQVKS*
Ga0137376_116462271	3300012208	Vadose Zone Soil	AFICASGPRVAVSGLGMIPQFAYSGPYEDLRLKNP*
Ga0137367_102741591	3300012353	Vadose Zone Soil	IQQKAYDEARFMPIWESAFLCASGPRVAVSGLHRDSFAYSAPYEDVQLKSS*
Ga0137384_109482821	3300012357	Vadose Zone Soil	AVLYKIQQRLYDEARFIPIWELGVLHASGPRVAVSGLGLIPLLLFSGPLEDVQLKS*
Ga0137361_102681302	3300012362	Vadose Zone Soil	PIWELGFLCASGPRAAVSGLSLIPLFAYSGPYEDVQLKS*
Ga0137361_111779261	3300012362	Vadose Zone Soil	IQQKLYDEALFINIWELGFLCASGPRAAVSGLGMIPLFAYSGPYEDVQLKT*
Ga0150984_1018698692	3300012469	Avena Fatua Rhizosphere	WELGFLCASGPRAAVSGLSLIPLFAYSGPYEEVQLKS*
Ga0137373_106198543	3300012532	Vadose Zone Soil	IWELSFLCASGPRVAVSGLSLIPLFAYSGPYEEVRLKS*
Ga0157291_101297931	3300012902	Soil	FIPIWENAFLCASGPRVAVSGLHGDSFAYSAPYEDVQLKSS*
Ga0137359_101544823	3300012923	Vadose Zone Soil	FMPIWELGFLCASGPRVAVSGVGLIKLHSYSAPFEDVQLKS*
Ga0137419_113190591	3300012925	Vadose Zone Soil	ELGALHASGPRVAVSGLGLIPMLLFSGPLEDVRLKS*
Ga0137416_101400891	3300012927	Vadose Zone Soil	VLYKIQQKLYDEARFIPIWELGALHASGPSVAVSGLGLIPMLLFSGPLEDVRLKS*
Ga0137404_103428881	3300012929	Vadose Zone Soil	LGALHASGPRVAVSGVGLIPLFAFSGPYEDVQLKA*
Ga0126369_104492931	3300012971	Tropical Forest Soil	IWELGFLSASGPRVAVSGIGLIRLHLYSAPFEDVQLKS*
Ga0126369_110265902	3300012971	Tropical Forest Soil	IWELGGLHASGPRVAVSGVGLIPLYAFSGPYEDVQLKS*
Ga0126369_111988191	3300012971	Tropical Forest Soil	KAYDDARFLPIWESAFLCASGPRVAVSGLHKDSFAYSAPYEDVQLQSS*
Ga0126369_119173632	3300012971	Tropical Forest Soil	QKLYDEAMFMSIWELGFLCASGPRAAVSGLGMIPLFAYSGPYEDVQLKS*
Ga0157375_103300921	3300013308	Miscanthus Rhizosphere	QELLSKIQQKAYDEVRFMPMWEPILPSASGPRVAVSGLNVKSFVYSAPYEDVQLSM*
Ga0134075_102880592	3300014154	Grasslands Soil	LPIWDLGGLHASGPRVAVSGVGLIPLFAFSGPYEDVQLKA*
Ga0163161_118162441	3300017792	Switchgrass Rhizosphere	KLYDEAMFIPIWELGFLCASGPRAAVSGLSLIPSFAYSGPYEDVQLKS
Ga0184612_104691511	3300018078	Groundwater Sediment	PLFDPAFICASGPRVASSGLGQIPQFAYSGPYEDLQLKKA
Ga0184639_102845623	3300018082	Groundwater Sediment	DDARFMPIWELSFLCASGPRAAVSGLSLIPLFAYSGPYEDVQLKS
Ga0180116_13203881	3300019229	Groundwater Sediment	DEARFIPIWELGFLSASGPRVAVSGIGLIRLHIYSAPFEDVQLKS
Ga0184645_11464612	3300019233	Groundwater Sediment	WEFTVLHASGPRVAVSGLGLIPLFAFSGPYEDVQLKS
Ga0180112_13577511	3300019238	Groundwater Sediment	KRQNLLYKIQQKLYDEARFMPIWEHCFLCASGPRATVSGLSLIPLFAYSGPYEDVQLKS
Ga0184641_12967641	3300019254	Groundwater Sediment	QQKAHDEALFMPIWENAFLCASGPRVAVSGLRSGLLVYSAPYEDVRLKSS
Ga0180115_12061741	3300019257	Groundwater Sediment	ELGFLSASGPRVAVSGIGLIRLHIYSAPFEDVQLKS
Ga0184646_10247631	3300019259	Groundwater Sediment	QKLYDEARFMPIWEHCFLCASGPRAAVSGLSLIPLFAYSGPYEDVQVKS
Ga0184642_15599562	3300019279	Groundwater Sediment	PSALILGNAVQKLYDDACFLLIWELGFLYASGPRVVVPGVGLVKVYSYSVPCEDVQLKS
Ga0187894_103023711	3300019360	Microbial Mat On Rocks	KLYDEARFMTIWEHCFLCASGPRAAVSGLNLIPLFAYSGPYEEVRLKS
Ga0137408_10516322	3300019789	Vadose Zone Soil	EARVIPIWELSFLCASGPRAAVSGLSMIPLFAYSGPYEDVQLRP
Ga0137408_11968322	3300019789	Vadose Zone Soil	QVLLHKMQQKLYDEARFLPIWELGFLSASGPRVAVSGIGLIRLHIYSAPFEDVQLKS
Ga0179585_10622191	3300021307	Vadose Zone Soil	DEARFIPIWELGFLCASGPRAAVSGLSLIPLFAYSGPYEDVQLKS
Ga0209827_113958911	3300025149	Thermal Springs	FMPIWDRGGLHASGPRVAVSGVGLIPLCAFSGPYEDVRLQS
Ga0207712_104357772	3300025961	Switchgrass Rhizosphere	HDEARFMPIWENAFLCASGPRVAVSGLHRDSFAYSAPYEDVRLKSS
Ga0209843_10238761	3300027511	Groundwater Sand	QKLYDEALFAPMWELGFLCASGPRAAVSGLSLIPLYAYSGPYEDVQLKI
Ga0209077_12436661	3300027675	Freshwater Sediment	KVYDEARLMPIWENAFLCVSGPRVAVSGLHADSFAYSAPYEDVRLKSS
Ga0209180_103336862	3300027846	Vadose Zone Soil	IWEHGVLHASGPRVAVSGLGLIPLFIFSGPLEDVQLKS
Ga0209814_103000871	3300027873	Populus Rhizosphere	MPIWENAFLCASGPRVAVSGLRSGLLVYSAPYEDVQLKTS
Ga0209382_102491471	3300027909	Populus Rhizosphere	SFQPFIPIWDLGGLHASGPRVAVSGLGLIPLFAFSGPLEDVRLKA
Ga0307504_104059302	3300028792	Soil	ELGFLCASGPRVAVSGLGMIPLHVYSAPYEDVQLKT
Ga0247827_109154382	3300028889	Soil	QQKLYDEVRFVPIWELGALHASGSRVAVSGVGLIPLFAFSGPYEDVQLKS
Ga0299907_111760171	3300030006	Soil	WELAFLCASGPRAAVSGMGMIPMFAYSGPYEDLQLKA
Ga0247628_12213251	3300030569	Soil	MQQQAYDEARSIPIWGLGFLCASGWCVAVSGLHCIKTFAYSAPYEDVQWQSA
Ga0247651_101316322	3300030608	Soil	MQQQAYDEARSIPIWVLGFLCASGWCVAVSGLHCIKTFAYSAPYEDVQWQSA
Ga0308200_10823141	3300030905	Soil	QKVYDEVRFMPIWENAFLCASGPRVAVSGLHRDSFAYSAPYEDVRLKSS
Ga0308190_11342241	3300030993	Soil	PLWELGFLCASGPRAAVSGLSLIPLFAYSGPYEDVQLKS
Ga0308204_101574232	3300031092	Soil	LFIPIFELGFLCASGPRVAVSGLGLIPAYIYSGPFEEVRLKA
Ga0308193_10188691	3300031096	Soil	RQKRQALLHKMQQKLYDEARFLPIWELGFLSASGPRVAVSGIGLIRLHIYSAPFEDVQLK
Ga0308194_100149182	3300031421	Soil	LILGNAVQKLYDDACFLLIWELGFLYASGPRVVVPGVGLVKVYSYSVPCEDVQLKS
Ga0318544_103319882	3300031880	Soil	IWESAFLCASGPRVAVSGLHKDSFAYSAPYEDVQLKSS
Ga0307406_115695992	3300031901	Rhizosphere	EAYFAPFWELGFLCASGPRAAVSGLGLIPLFAYSAPLEEVRLKS
Ga0307407_115091012	3300031903	Rhizosphere	MSENSVTEARFIPIWELGFLCASGPRAAVSGMGLIPTFAYSGPYEDVQLKS
Ga0310910_114242341	3300031946	Soil	SAFLCASGPRVAVSGLHKDSFAYSAPYEDVQLKSS
Ga0307411_118091472	3300032005	Rhizosphere	QGLLRKIQQKVYDQAYFIPIWELSFLCASGPRVAVSGLGLIPLFAYSGPYEDVQLKS
Ga0314784_002346_1998_2111	3300034663	Soil	WELGFLCASGPRAAVSGLSMIPLFAYSGPYEDVQLKS
Ga0314784_029126_3_113	3300034663	Soil	ELGFLCAAGPRAAVSGLSLIPLFAYSGPYEDVQLKS
Ga0314787_018896_2_169	3300034665	Soil	LLYKIQQKAYDEALFMPIWENAFLCASGPRVAVSGLRSGLLVYSAPYEDVQLKSS
Ga0314792_009295_3_119	3300034667	Soil	IWELGFLCASGPRAAVSGLSMIPLFAYSGPYEDVQLKS
Ga0314801_015210_1104_1244	3300034676	Soil	YDEARFIPIWELGFLCASGPRAAVSGLSMIPLFAYSGPYEDVQLKS
Ga0370546_074858_1_153	3300034681	Soil	QQKLYDEVRFLPIWEQGVLNASGPRVAVSGVGLIPLFLFSGPYEDVQVKA

Hidden Markov Model


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