NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F057975

Metagenome / Metatranscriptome Family F057975

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F057975
Family Type Metagenome / Metatranscriptome
Number of Sequences 135
Average Sequence Length 71 residues
Representative Sequence MLTLMHQNANVHPHPFSSLEALLAEPFPHTPQEMLQLEQRLSTAAAQIADQILLVQLTRAHEDEHFVRQA
Number of Associated Samples 110
Number of Associated Scaffolds 135

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 93.80 %
% of genes near scaffold ends (potentially truncated) 80.00 %
% of genes from short scaffolds (< 2000 bps) 91.11 %
Associated GOLD sequencing projects 106
AlphaFold2 3D model prediction Yes
3D model pTM-score0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (54.074 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(31.111 % of family members)
Environment Ontology (ENVO) Unclassified
(33.333 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(46.667 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116
1F14TC_1011535243
2JGI25382J43887_102604651
3Ga0066680_107186522
4Ga0066685_103800931
5Ga0066678_107568272
6Ga0066671_109175911
7Ga0066388_1072369111
8Ga0066388_1072647932
9Ga0070700_1007174681
10Ga0070708_1017329362
11Ga0070706_1001481374
12Ga0070697_1005229003
13Ga0066695_106591502
14Ga0066661_104614151
15Ga0066692_105725301
16Ga0066704_106831561
17Ga0066700_110114091
18Ga0068855_1020536891
19Ga0070702_1010293971
20Ga0066903_1012954162
21Ga0066903_1058331511
22Ga0079220_116232592
23Ga0075430_1017436291
24Ga0075420_1014965601
25Ga0075434_1002164811
26Ga0075429_1004649791
27Ga0068865_1013063041
28Ga0099791_103340061
29Ga0099791_105776302
30Ga0099793_105482091
31Ga0066710_1046051841
32Ga0099829_108062462
33Ga0099829_108369461
34Ga0099830_110456462
35Ga0099827_101934331
36Ga0099827_106624031
37Ga0099827_114544301
38Ga0105245_132270501
39Ga0066709_1033572741
40Ga0099792_108632711
41Ga0111538_123327842
42Ga0105249_101087155
43Ga0114944_13137672
44Ga0126374_102187722
45Ga0126374_105299992
46Ga0126374_105681542
47Ga0105067_10442691
48Ga0105072_11092441
49Ga0126304_105757351
50Ga0126384_106013581
51Ga0126384_119491782
52Ga0126382_113948201
53Ga0126382_117168691
54Ga0126378_111689711
55Ga0126378_113119732
56Ga0126378_119395652
57Ga0126377_129742101
58Ga0126379_128935521
59Ga0126383_127189192
60Ga0137392_103322271
61Ga0137392_109831921
62Ga0137391_106211272
63Ga0137391_110801871
64Ga0137391_111782131
65Ga0137391_113896292
66Ga0137389_101413251
67Ga0137388_102844951
68Ga0137388_111863272
69Ga0137365_104482563
70Ga0137362_114122831
71Ga0137362_116530231
72Ga0137380_107347331
73Ga0137379_104571922
74Ga0137378_100116798
75Ga0137378_109505071
76Ga0150985_1083605791
77Ga0137370_110466481
78Ga0137387_103943241
79Ga0137387_105365082
80Ga0137372_110978061
81Ga0137385_109924842
82Ga0137385_115951932
83Ga0137361_111127042
84Ga0137390_101849631
85Ga0134038_10274961
86Ga0157313_10429021
87Ga0137396_112127251
88Ga0137359_100658731
89Ga0137416_120906991
90Ga0137407_104692562
91Ga0137407_119293532
92Ga0126375_120145452
93Ga0164302_109918892
94Ga0126369_106865561
95Ga0134089_102435311
96Ga0182039_121758042
97Ga0182038_119282071
98Ga0184619_102617742
99Ga0190265_109145392
100Ga0190268_120062801
101Ga0184645_11315671
102Ga0184648_15181021
103Ga0210378_100676581
104Ga0210378_101275623
105Ga0126371_123111401
106Ga0207668_104256832
107Ga0207668_117480292
108Ga0207708_105694192
109Ga0209234_10281711
110Ga0209861_10054211
111Ga0209466_11247402
112Ga0209388_10744702
113Ga0209588_12102982
114Ga0209689_13192691
115Ga0209590_108777041
116Ga0209583_106383951
117Ga0209853_10589701
118Ga0308206_10629981
119Ga0308206_11688991
120Ga0308196_10038091
121Ga0308190_11550431
122Ga0308189_101079741
123Ga0308204_100444741
124Ga0308182_10155832
125Ga0307499_102029972
126Ga0307469_110969892
127Ga0318535_105656472
128Ga0318523_106245341
129Ga0310910_111721541
130Ga0310909_115128751
131Ga0318559_100433941
132Ga0310890_117338891
133Ga0307470_112055502
134Ga0314796_175352_263_514
135Ga0314798_066892_3_203
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 46.94%    β-sheet: 0.00%    Coil/Unstructured: 53.06%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

10203040506070MLTLMHQNANVHPHPFSSLEALLAEPFPHTPQEMLQLEQRLSTAAAQIADQILLVQLTRAHEDEHFVRQASequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.46
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
45.9%54.1%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Groundwater Sediment
Thermal Springs
Groundwater Sediment
Watersheds
Soil
Vadose Zone Soil
Tropical Forest Soil
Serpentine Soil
Grasslands Soil
Agricultural Soil
Soil
Grasslands Soil
Soil
Soil
Hardwood Forest Soil
Soil
Soil
Tropical Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Groundwater Sand
Avena Fatua Rhizosphere
Corn Rhizosphere
Miscanthus Rhizosphere
Arabidopsis Rhizosphere
Populus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
3.0%8.1%31.1%11.9%7.4%3.0%3.7%3.7%4.4%3.0%3.7%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
F14TC_10115352433300000559SoilMLTLMHQNADIPPQAFPMLEVFLTEPFPHTPQDMMQLEQRLARAAAQTADQILLIQVTRAHEDEAFVKQA
JGI25382J43887_1026046513300002908Grasslands SoilMLTLLHHTTEVHPCQFSWLEALLEEPFPQTPEDLLQLEQRLATAAGQAADQIVLVQLTRAHEDEAF
Ga0066680_1071865223300005174SoilMLTLLHHTTEVHPCQFSLLEALLEEPFPQTPNDLLQLEQRLSAAAAQVADQIVLAQLTRAHEA
Ga0066685_1038009313300005180SoilMLTLRHHTTEVHPCQFSLLEALLEEPFPQTPNDLWQLEQRLSAAAAQVADQIVLAQLTRAHEAEAFVTQ
Ga0066678_1075682723300005181SoilMLTLMHHNANDLPHPFCMLEVLLAEPFPQTPADMLQLEQRLSVAAAQTADQMVLVQLTRAHE
Ga0066671_1091759113300005184SoilMLTLLHQHTTSVPQSQFPSLEALLGEPFPRTPEDLLQLERRLSTAAGQVADQIVLVQLTRAHEDEAF
Ga0066388_10723691113300005332Tropical Forest SoilMLTLMQQNAHAHPHLFTSLEALLAEPFPHTPQEMLQLEQRLSTAAAQIADQILLVQLTRAHEDEHFVR
Ga0066388_10726479323300005332Tropical Forest SoilMLTLMQHTTHGLPHPFPTLEALLAEPFPRTPQDMMQLERQLSTATAQTADQIMLVQVTRAHEDEAFVTDLPPKPQALEAS*
Ga0070700_10071746813300005441Corn, Switchgrass And Miscanthus RhizosphereMLTLTQHTTNSLPHPFPTLEAMLAEPFPRTPQDMMQLEQRLSIAAAQTADQMVLVERPIRLHVL*
Ga0070708_10173293623300005445Corn, Switchgrass And Miscanthus RhizosphereMLTLLHHTTDAHQCQFASLEALLAEPFPQTPQDLLPLAQRLSVAAAQVADQVVLVQLTRAHAAEAFVT
Ga0070706_10014813743300005467Corn, Switchgrass And Miscanthus RhizosphereMLTLMHHTTNGLPHPFSTLEALLAEPFPRTPQDMMQLEQRLSIAAAQTADQILLVQLTRAHEDETFVRQAIAQAR
Ga0070697_10052290033300005536Corn, Switchgrass And Miscanthus RhizosphereMLTLLHHTTSVPQSQFPSLEALLAEPFPRTPEDLLQLEQRLSTAAVQVADQIVLVQLTRAHEDEAF
Ga0066695_1065915023300005553SoilMLTLLHHTTDVHQCQFSWLEALLEEPFPRTPEDLFHLEQRLSTAAMQVADQIVLMQLTRAHEDEA
Ga0066661_1046141513300005554SoilMLTLLHHTTEVHPCQFSLLEAILEEPFPQTPNDLFQLEQRLSAAAAQVTDHIVLAQLTHAHEAEAFVTQAIAQARAQS
Ga0066692_1057253013300005555SoilMLTLLHHTTEVHPCQFSLLEALLEEPFPQTPNDLLQLEQRLSAAAAQVADQIVLAQLTRAHEAGAFVTQALAQARAQSPV
Ga0066704_1068315613300005557SoilMLTLMHHNANDLPHPFCMLEVLLAEPFPQTPADMLQLEQRLSVAAAQTADQMVLVQLTRAHEAEAFVRQAIAQARAQSPVPL
Ga0066700_1101140913300005559SoilMLTLMHQNANVHPHSFSSLEALLAEPFPHTPQEMLQLEQRLSTAAAQTADQMVLVQLTRAHEAEAFVTQAIAQARAQSPV
Ga0068855_10205368913300005563Corn RhizosphereMLTLLHHTTEVYPCQFSLLEALLAEPFPQTPNDLLQLEQRLSAAAAQVADQIVLVQLTRAHEAEAFVTQAIAHARAQSP
Ga0070702_10102939713300005615Corn, Switchgrass And Miscanthus RhizosphereMLTLMHQNAHIPPQAFSMLEVFLTEPFPQTPQDMMQLEQRLARAAAQTADQMLLIQLTRAHEDEAFVKQATAQ
Ga0066903_10129541623300005764Tropical Forest SoilMLTLLHQHTTSVPQAQFPSLEALLGEPFPRTPEDLLQLERRLSTAAGQVADQLVLVQLTRAHEDKPHHDILALPHFW*
Ga0066903_10583315113300005764Tropical Forest SoilMLTLMHQNANAHPHPFSSLEALLAEPFPHTPQEMWQLEQRLSIAAAQIADQILLVQLTRAHE
Ga0079220_1162325923300006806Agricultural SoilMLTLMQHTTHSLPHPCSTLEALLAEPFPRTPQDMVQLEQQLSTAAAQTADQILLVQVTRAHEDEAFVRHAIAQARAQRAV
Ga0075430_10174362913300006846Populus RhizosphereMFPLLHANAHAHPHSFSLLEALLAEPFPHTPQEMLQLEQRLSTAAAQTADQLLLVQLTRAHEDEAFVRQA
Ga0075420_10149656013300006853Populus RhizosphereMLTLMHHTTHVPPHPFPTLEVLLADPFPHTPQDMMQLEQRLSTAAAQTADQILLVQVTRAHEDEAFVRQAI
Ga0075434_10021648113300006871Populus RhizosphereMLTLLHHTPKVHPCQFSLLEALLEKPFPQTPHDLLQLEQRLSAAATQVADQIVLGQLTRAHEEEAVVRQAIARARGQSLGDFRKK*
Ga0075429_10046497913300006880Populus RhizosphereMLTLLHHTPKVHPCQFSLLEALLEEPFPQPPNDLLQLEQRLSAAAAQVADQIVLAQLTRA
Ga0068865_10130630413300006881Miscanthus RhizosphereMLTLMHQNANVPPPPFPALEVLLAEPFPHTPQEMLQLEQRLSTAAAQTADQILLVQVTRAHEDEAFVRQAIAQARAQR
Ga0099791_1033400613300007255Vadose Zone SoilMLTLMHQNAHIPPQAFSMLEVFLTEPFPHTPQDMMQLEQRLARAAAQTADQILLIQLTRAHEDEAFVKQAIAQARAQRS
Ga0099791_1057763023300007255Vadose Zone SoilMLTLMHHNANVHSHPFSSLEVLLAEPFPHTPQEMLQLEQRLSTAAAQTADQMVLVQLTRAHEA
Ga0099793_1054820913300007258Vadose Zone SoilMLTPLHHTTDVHQCQFSLLEALLEEPFPRTPEDLLQLEQRLSTAAGQIADQIMLVQLTRAHKDEA
Ga0066710_10460518413300009012Grasslands SoilMLTLMHNTTCVPQPQFPSLEALLDEPFPRTPEDLVQLEQRLAIAAGQAADQIVLVQLTRAHED
Ga0099829_1080624623300009038Vadose Zone SoilMLTLMHHNTDGLPHPFPTLEALLAEPFPRTPQDMMQLEQQLSTAAAQTADQIMLVQVTRAHADEAFVRQAIAQARAWRAVPLVHKG
Ga0099829_1083694613300009038Vadose Zone SoilMLTLLHHTTSVPQLQFPSLAALLDEPFPRTPEDMVQLEQRLLTAAAQTADQMLLVQVTRAHEDEAF
Ga0099830_1104564623300009088Vadose Zone SoilMLTLMHHNTDGLPHPFPTLEALLAEPFPRTPQDMMQLEQQLSTAAAQTADQFMLVQVTRAHEDEAFVRQAIAQARAWRAVPLVHK
Ga0099827_1019343313300009090Vadose Zone SoilMLTILHHTTELHLCQFSLLEAILEEPFPQTPNDLFQLEQRLSAAAAQVADHI
Ga0099827_1066240313300009090Vadose Zone SoilMLTLLHHTTEVHPCQFSLLEALLEEPFPQTPNDLLQLEQRLSAAAAQVADQIGAPGVIAG
Ga0099827_1145443013300009090Vadose Zone SoilIATQTPTTAVPQSQFPSLEALLDAPFPQTPQDLLQLEQRLSAAAAQVADQIVLVQLTRAHEAEAFVMQAIAGVAQRFV*
Ga0105245_1322705013300009098Miscanthus RhizosphereMLTLTQHTTNSLPHPFPTLEAMLAEPFPRTPQDMMQLEQRLSIAAAQTADQMVLVQLTRAHEDETFVRQALAQVRLQGL
Ga0066709_10335727413300009137Grasslands SoilMLTLMHQNANVHPHPFSSLEALLAEPFPHTPQEMLQLEQRLSTAAAQIADQILLVQLTRAHEDEHFVRQA
Ga0099792_1086327113300009143Vadose Zone SoilMLSLMHHNANVPPPPFPALEVLLAEPFPHTPQEMLQFEQRLSTAAAQTADQILLVQVTRAHEDEAFVRQ
Ga0111538_1233278423300009156Populus RhizosphereMLTLLHQNVNAHPCPFSSLEALLAEPFPHTPQEMLQLAQRLSTAAAQIADQILLVQLTRAHEDEHFVRHALAQARGQ
Ga0105249_1010871553300009553Switchgrass RhizosphereMLTLLHHTTKVHPCQFSLLEAILEEPFPQTPHDLLQLEQRLSAAAAQVADQIVLVQLTRAHEDEAFVRQAIARARGQSP
Ga0114944_131376723300009691Thermal SpringsMLTLVHHTTDVLPCQFSSLEALFDAPFPQTPEDMLQLEQRLSAAAAQAADQIVLVQLTRAHEAEVFVTPAIAQARAQSAVPLVHK
Ga0126374_1021877223300009792Tropical Forest SoilMQHTTHGLPHPFSTLEAMLAEPFPRTPQDMMQLEQRLATAAAQTADQMLLIQGTRAHEDEAFVTDLPPKPQALEAS*
Ga0126374_1052999923300009792Tropical Forest SoilMLTLMHQNADVPPHPFPALEVFLAEPFPHTPQAMLQLEQRLSTAAAQTADQIVLVQVTRAHEDEAFVRQAI
Ga0126374_1056815423300009792Tropical Forest SoilMLTLMQHNPKGLSYPFPTLEALLAEPFPRTPQDMMRLEQQLSTAAAQTADQIMRVQVTRAHEDEAFVTDLPPKPQALEAS*
Ga0105067_104426913300009812Groundwater SandMLTLLHHTTEVHPCQFSLLEAILEEPFPQTPNDLFQLEQRLSAAAAQVADHIVLVQLTRAHEAEAFVTQAIVQAR
Ga0105072_110924413300009818Groundwater SandMLTLLHHTTEVHPCQFSLLEALLEEPFPQTPNDLWQLEQRLSAAAAQVADQIVLVQLTRAHEAEAFVMQAIAGVAQR
Ga0126304_1057573513300010037Serpentine SoilSLSKEVPQPMRTLMHHTTTVPLPPFPMLEVLLAEPFPHTPQDMMQLEQRLSTAAAQTADQILLVP*
Ga0126384_1060135813300010046Tropical Forest SoilMHQNANAHPHPFSSLEALLAEPFPHTPQEMWQLEQRLSIAAAQMADQILLVQLTRAHEDENFVRHALAQARG*
Ga0126384_1194917823300010046Tropical Forest SoilMLTLTQHTTKSLPYPFPTLEAMLAEPFPRTPQDMMQLEQRLLIAAAQTADQMMLVQVTRAHEDEAFVRHAIAQARA*
Ga0126382_1139482013300010047Tropical Forest SoilTNGLPHPFPTLEALLAEPFPRTPQDLMQLEQQLSTAAAQTADQILLVQVTRAHEDEGLCRNFSLKRSEV*
Ga0126382_1171686913300010047Tropical Forest SoilMLTLMHQNANAHPHPFSSLEALLAEPFPHTPQEMWQLEQRLFIAAAQIADQILLVQLTRAHEDENFVRHALAQARG*
Ga0126378_1116897113300010361Tropical Forest SoilMLTLMHQNANAHPHPFSSLEALLAEPFPHTPQEMLQLEQRLSTAAAQTADQMLLVQVTRAHEDEAFCRFNHKFACSDA*
Ga0126378_1131197323300010361Tropical Forest SoilMLTLMQHTTNGLPHPFPTLAALLAEPFPRTPQDMMQLEQRLSIAAAQTAAQIVLVQVTRAHED
Ga0126378_1193956523300010361Tropical Forest SoilMLPLMHQNANADPHPFSSLEALIAEPFPHTPQEMLQLEQRLSIAAAQIADQILLVQLTRAHEDENFVRHALAQARG*
Ga0126377_1297421013300010362Tropical Forest SoilMLTLMHHTTNNLPHPFPTLEALLAEPFPRTPQDMMQLEQRLSTAAAQTADQILLVQVTRAHEDEAFVRQAIAQARAQRA
Ga0126379_1289355213300010366Tropical Forest SoilMLTPLHQNANAHPHPCSSLEALLAEPFPHTPQEMWQLEQRLSIAAAQIADQILLVQLTRAHEVENFVRHALVQARG*
Ga0126383_1271891923300010398Tropical Forest SoilMLTLMQHTTNGLPHPFPTLEALLAEPFPRTPQDMMQLERQLSTATAQTADQIMLVQVTRAHEDEAFVTDLPPKPQALEAS*
Ga0137392_1033222713300011269Vadose Zone SoilMLTLVHNTTDVHQRQFSSLEALLEAPFPQTPEDMLQLEQRLSAATAQVADQIVLVQLTRAHEAEAFVTQAIAQARAQSP
Ga0137392_1098319213300011269Vadose Zone SoilMLTLMHHTANVHPHPFSSLETLLAESFPHTPPEMLQLEQRLSTAAAQTADQIVLVQLTRAHEAE
Ga0137391_1062112723300011270Vadose Zone SoilLASLLTLVHNTTDVHQRQFSSLEALLDAPFPQTPEDMLQLEQRLSAATAQVADQIVLVQLTRAHEAEA
Ga0137391_1108018713300011270Vadose Zone SoilMLTLMHHTANVHPHPFSSLETLLAESFPHTPPEMLQLEQRLSTAAAQTADQIVLVQLTRAHEAEAFV
Ga0137391_1117821313300011270Vadose Zone SoilMLTLLHHTTTVPQSQFPSLEALLDEPFPRTPEDLLQLERRLSTAAGQVADQIVLVQLTRAHEDEAF
Ga0137391_1138962923300011270Vadose Zone SoilMLTLVHNTTDVHQRQFSSLEALLEAPFPQTPEDMLQLEQRLSAATAQVADQIVLVQLTRAHEAEA
Ga0137389_1014132513300012096Vadose Zone SoilMLTLLHHTTDVHPCQFSSLEALLEEPFPQTPHDLWQLEQRLSAAATQVADQIVLVQLMRAHEAEAFVT
Ga0137388_1028449513300012189Vadose Zone SoilMLTLLHHTTEVHLCQFSLLEAILEEPFPQTPNDLFQLEQRLSAVAAQVADHIVLAQLTRV
Ga0137388_1118632723300012189Vadose Zone SoilMLTLLHHTTEVHPCQFSLLEAILEEPFPQTPHDLFQLEQRLSAVAAQVTDHIVLVQLTRAHEAEAFVTQAIVQARA
Ga0137365_1044825633300012201Vadose Zone SoilMLTLLHHTTDAHQCQFASLEALLAEPFPQTPQDLLQLEQRLSVAAAQVADQVV
Ga0137362_1141228313300012205Vadose Zone SoilMLTLMHHNTNGLPHPFPLLEVLLAEPFPQTPEDMLQLEQRLSVAAAQTADQMVLVQLTRAHEAEAFVRQAIAQARAQ
Ga0137362_1165302313300012205Vadose Zone SoilMLTLLHHTTEVHPCQFSLLEALLEEPFPQTPNDLLQLEQRLSAAAAQVADQIVLAQ
Ga0137380_1073473313300012206Vadose Zone SoilMLTLMHHNANVHPHPFSSLEALLAEPFPHTPQEMVQLEQRLSTAAAQTADQMVLVQLTRAHEAEAFVTQAIAQARAQSPVPLVHKG
Ga0137379_1045719223300012209Vadose Zone SoilMLTRIHHTTYVPQPQFPSLEALLNEPFPRTPEDLLQLEQRLSTAAVQVADQIVLVQLTRAHED
Ga0137378_1001167983300012210Vadose Zone SoilMLTLMHHNTNGLPHPFASLEAMLAKPFLHTPQERWQLEQRLSVAAAQTADQMVLVQLTRAHEAEAFVTQAIAQARAQSPVPLVHKGFRM
Ga0137378_1095050713300012210Vadose Zone SoilMLTLTQHTTNSLPHPFPTLEAMLAEPFPRTPQDMMQLEQRLSIAAAQTADQILLVQLTRAHEDEAFVRQAIAQARAQYAVSLVHKARLVMVA
Ga0150985_10836057913300012212Avena Fatua RhizosphereMLTLMHHNTHGLPYPFPTLEALLAEPFPRTPQDMMQMEQRLSIAAAQTADQIVLVQVTRAHEDEAFVRQAITQA
Ga0137370_1104664813300012285Vadose Zone SoilMLTLLHQNANAHPHPFSSLEAFLVEPFPHTPQEMLQLEQRLSTAAAQIADQILLVQLTRAHEDEHFVRHALAQA
Ga0137387_1039432413300012349Vadose Zone SoilMLTLLPHTTEVHSCQFALLEALLEEPVPHTPQERLPLEPRLSTAAAQTADQIV
Ga0137387_1053650823300012349Vadose Zone SoilMLTLMHHNTNGLPHPFASLEAMLAEPFPHTPQEMLQLEQRLSTTAAQTADQIVLVQLTRAHEAEAFVTQAIAHAR
Ga0137372_1109780613300012350Vadose Zone SoilMLTLMHHTTTVPLHPFPTLEVLLAEPFPHTPQEMLQLEQRLSTTAAQTADQIVLVQLTRAHEAE
Ga0137385_1099248423300012359Vadose Zone SoilMLTLLHHTTDAHQCQFASLEALLAEPFPQTPHDLLQLEQRLSVAAAQVADQVVLVQLTRAHEAEAFVTQ
Ga0137385_1159519323300012359Vadose Zone SoilMLTLMHHNTNGLPHPFASLEAMLAEPFPHTPQEMLQLEQRLSTTAAQTADQIVLVQLTRAHEAEAFVTQAIA
Ga0137361_1111270423300012362Vadose Zone SoilMLTLMHHNAKVHPHPFSSLETLLAGPFPHTPQEMLQLEQRLSTAAAQTADQIVLVQLTRAHEAEAFVT
Ga0137390_1018496313300012363Vadose Zone SoilMLTLHHTTEVHPCQFSLLEALLEEPFPQTPDDLLQLEQRLSAAAAQVADQIVLAQLTRAHEAEAFVTQ
Ga0134038_102749613300012382Grasslands SoilMLTLLHQTTAVHPCQFSWLEALLEEPFPQTPNDLVQLEQHLSAAAAQVADHIVLAQLTRAHEAEAFVTQALAQA
Ga0157313_104290213300012503Arabidopsis RhizosphereMLTLMHQNANVPPPPCPALEVLLAEPFPHTPQEMLQLEQRLSTAAAQTADQILLVQVTRAHEDEAFVRQAIAQA*
Ga0137396_1121272513300012918Vadose Zone SoilMLTLMQHTTNGLSHPFPTLEALLAEPFPRTPQDMMQLEQQLATAAAQTADQIMLVQVTRAHEDEAFVRQA
Ga0137359_1006587313300012923Vadose Zone SoilMLTLLHHTTDVHQRQFASLEALLDEPFPQTPEDMLQHEQRLAAATAQVADQIVLVQLTRA
Ga0137416_1209069913300012927Vadose Zone SoilMLTLLHHTTEVHPCPFSLLEALLEEPFPHTPQEMLQLEQRLSTAAAQTADQMVLVQLTRAHEAEA
Ga0137407_1046925623300012930Vadose Zone SoilMLTLMQHNANGPPYPFPWLAALLAEPFPQTPQEMLQLEQRLSIAAARTADQILLVHIPPDLVVIP*
Ga0137407_1192935323300012930Vadose Zone SoilMLTLLHHTTEVHPCQFSLLEALLEEPFPQTPEDLLQLEQRLATAAGQAADQIV
Ga0126375_1201454523300012948Tropical Forest SoilMLTLLQHTTDVHSCQCSLLETFLEEPFPQTPHELFQLEQRLSAAAGQIADQIVLGQRTRAHAAEALVTQAMAHARAQSPGPLVHKGVR
Ga0164302_1099188923300012961SoilMLTLTQHTTNSLPHPFPTLEAMLAEPFPRTPQDMMQLEQRLSIAAAQTADQMVLVQLTRAHEDETFVRQALAQVRL
Ga0126369_1068655613300012971Tropical Forest SoilMLTLMHQNANAHPHPFSSLEALLAEPFPHTPQEMWQLEQRLSIAAAQIADQILLVQLTRVHEVENFVRHALAQARG*
Ga0134089_1024353113300015358Grasslands SoilTMLTLLHHTTEVHPCQFSLLEALLEEPFPQTPNDLLQLEQRLSAAAAQVADQIVLAQLTRAHEGS*
Ga0182039_1217580423300016422SoilMLTLMQHNTHGLPHPFPTLEALLAEPCPRPPQDMRQLAQPLSTATAPAAAQMLLVQVTRA
Ga0182038_1192820713300016445SoilMLTLLHPPTDAYQCQFASLEAFLAEPFPQTPHDLLQLEQRLSVAAAQVADQVVLVQLTRAHEAGAFVTQAIAQARARSPVPL
Ga0184619_1026177423300018061Groundwater SedimentMLTLMHHNANVHSHPFSSLEVLLAEPFPHTPQEMLQLEQRLSTAAAQTADQMVLVQLTRAHEAEAFVT
Ga0190265_1091453923300018422SoilMLTLMQHPANVHPHPFSSLEALLAEPFPHTPQEMLQLEQRLSIAAAQTADQIVLVQLTRAHEA
Ga0190268_1200628013300018466SoilMLTLMDHNTHGLPHPFPTLEALLAEPFPRTPQDMVQLEQRLATAAAQTADQMLLIQVTRAHEDEAFVRQAMVQARAQ
Ga0184645_113156713300019233Groundwater SedimentMLTLMHHHANVHSHPFSSLEVLLAEPFPHTPQDMLQLEQRLSTAAAQTADQIVLVQLTRAHEAEVFVTQAIAQARAQ
Ga0184648_151810213300019249Groundwater SedimentMLTLLHHTTEVHPCQFSLLEALLEEPFPQTPNDLFQLEQRLSAAAAQVADHIVLVQLTRA
Ga0210378_1006765813300021073Groundwater SedimentMLTLLDHTTSVPQSQFPSLEALLAEPFPRTPEDLLQLEQRLATAAGQAADQIVLVQ
Ga0210378_1012756233300021073Groundwater SedimentMLTLLDHTTSVPQLQFPSLEALLAEPFPRTPEDLLQLEQRLATAAGQAADQIVLVQ
Ga0126371_1231114013300021560Tropical Forest SoilMLTLMHQNANAHPHPFSSLEALLAEPFPHTPQEMWQLEQRLSIAAAQIADQILLVQLTRAHEVENFVRHALAQARG
Ga0207668_1042568323300025972Switchgrass RhizosphereMLTLMHHTTNVPPHPFPTLEVLLAEPFPHTPQDMMQLEQRLSTAAAQTADQILLVQVTRAHEDEAFVRQAIAQA
Ga0207668_1174802923300025972Switchgrass RhizosphereMLTLMHQHAHVHPHPFSSLEVLLEEPFPHTPQEMLQLEQRLSTAAAQTADQMVLVQLTRAHEAEAFVTQAIAHARAQS
Ga0207708_1056941923300026075Corn, Switchgrass And Miscanthus RhizosphereMLTLTQHTTNSLPHPFPTLEAMLAEPFPRTPQDMMQLEQRLSIAAAQTADQMVLVERPIRLHVL
Ga0209234_102817113300026295Grasslands SoilMLTLLHQTTAVHPCQFSWLEALLEEPFPQTPNDLVQLEQHLSAAAAQVADHIVLAQLT
Ga0209861_100542113300027332Groundwater SandMLTLMHHNANVHSHPFSSLEVLLAEPFPHTPQDMLQLEQRLSTAAAQTADQMLLVQLTRAHEDEAFVRQAIAQARAQCSVPL
Ga0209466_112474023300027646Tropical Forest SoilMLTLLHHTTAVPQSQFPSLEALLAEPFPRTPEDLLQLEQRLSTAAAQVADQIVLVQL
Ga0209388_107447023300027655Vadose Zone SoilMLTLMHHNANVHSHPFSSLEVLLAEPFPHTPQEMLQLEQRLSTAAAQTADQMVLVQLTRAHEAEAFVTQAIAHARAQSPVPLVHKGF
Ga0209588_121029823300027671Vadose Zone SoilMLTLMHHNANVHPHPFSSLETLLAEPFPHTPQEMLQLEQRLSTAAAQTADQMVLVQLTRAHEAEA
Ga0209689_131926913300027748SoilMLTLMHQNANVHPHSFSSLEALLAEPFPHTPQEMLQLEQRLSTAAAQIADQILLVQLTRAHEDEHFVR
Ga0209590_1087770413300027882Vadose Zone SoilMLTLLHHTADAHQRQFASLEALLAEPFPQTPEDMLQLEQRLSVAAAQLADQIMLVQLTRTHEAEAFVMQAIAHAR
Ga0209583_1063839513300027910WatershedsMLTLLPHTADVHQCQFPLLEALLEEPFPQTPNDLVQLEQRLSAVAAQVADQMVLVQLTRAHEAEA
Ga0209853_105897013300027961Groundwater SandMLTLLHHTTAVPQSQFPSLEALLDAPFPQTPQDLLQLEQRLSAAAAQVADQIVLVQLTRAHEAEAFVMQAIAGVAQRFV
Ga0308206_106299813300030903SoilMLTLMHHNANVHPHPFSSLETLLAEPFPHTPQEMLQLEQRLSTAAAQTADQMVLVQLTRAHEAEAFVTQAIAHARAQSP
Ga0308206_116889913300030903SoilMLTLMQHNTNGLPHPFPTLEALLAGPFPRTPQDMMQLEQQLSTATAQTADQIMLVQVTRAHEDEAFVRQAMA
Ga0308196_100380913300030989SoilMLTLLDHTTSVPQSQFPSLEALLAEPFPRTPEDMLQLEQQLLTAAAQTADQMLLIQLTRAHEDEAFVKQATAQARAQRAVPLVHK
Ga0308190_115504313300030993SoilMLTLLDHTTSVPQSQFPSLEALLAEPFPRTPEDLLQLEQRLATAAGQAADQIVLVQLTRAHEDEAFVRQAIAHVRAQSPGIRLRRDS
Ga0308189_1010797413300031058SoilMLTLLHHTTEVHPCQFSLLEALLEEPFPQTPHDLLQLEQRLSAAAAQVADHIVLTQLTRAHEAEAFVTQAL
Ga0308204_1004447413300031092SoilMLTLLHHTTEVHPCQFSWLEALLEEPFPQTPEDLLQLEQRLATAAGQAADQIVLVQLTRAHEDEAFVRQAIALVRARSP
Ga0308182_101558323300031125SoilMLTLLHHTTSVPQLQFPSLAALLDEPFPQTPEDMLQLEQHLLTAAAQTADQILLVQVTP
Ga0307499_1020299723300031184SoilMLTLMHQHAHVHPHPFSSLEVLLEEPFPHTPQEMLQLEQRLSTAAAQTADQIVLVQLTRAHEAEAFVTQAI
Ga0307469_1109698923300031720Hardwood Forest SoilMLTLLHHTTEVHPCQFSLLEALLEEPFPQTPNDLLQLEHRRSTAAAQTADQMVLVQLTRAHEAEAFVRQAIAHA
Ga0318535_1056564723300031764SoilMLTLMQHNTHGLPHPFPTLEALLAEPCPRPPQDMRQLAQPLSTATAPAAAQTLLVQVTRAHEDKACGRPAMAQARAPRAV
Ga0318523_1062453413300031798SoilMLTLLHQNANAHPHPFSSLEALLAEPFPHTPQEMLQLEQRLSTAAAQIADQILLVQLTRAHEDEHFVRH
Ga0310910_1117215413300031946SoilMPTLMHQNAHAHPHLFTSLEALLAEPFPHTPQEMLQLEQRLSTAAAQMADQILLVQLTRAHEDEHFVRQAMAQARGQHPVP
Ga0310909_1151287513300031947SoilMLTLMYHTNNVLPPPFPTLEALLAEPFPHTPQEMVQLEQRLSTAAAQTADQILLVQVTRAHEDEAFVRGFGSCAAT
Ga0318559_1004339413300032039SoilMLTLMQHNTDGLPHPFPTLEALLAEPFPRTPQDMMQLERQLSTATAQTADQMMLVQVTRAHEDEAFV
Ga0310890_1173388913300032075SoilMLTLMQHTTNGLPHPFPTLEALLAEPFPRTPQDMMQLEQQLSTAAAQTADQIMLVQVTRAHEDEAC
Ga0307470_1120555023300032174Hardwood Forest SoilMLTLMHHTTTVPLHPFPMLEVLLAEPFPHTPQDMMQLEQRLSTAAAQTADQILLVQLTRAHEDAAFVRQAI
Ga0314796_175352_263_5143300034671SoilMLTLLQHTTDGHSCQCSLLETFLEEPFPQTPHDLFQLEQRLSAAAAQVADHIVLAQLTRAHEAEAFVTQAIAQARAQSPVPLVH
Ga0314798_066892_3_2033300034673SoilMLTLMQHTTKGLPHPFPTLEAVLAEPFPRTPQDMMQLEQRLATAAAQTADQILLIQVTRAHEDEAFV


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.