Metagenome / Metatranscriptome Family F057889

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F057889
Family Type	Metagenome / Metatranscriptome
Number of Sequences	135
Average Sequence Length	41 residues
Representative Sequence	VRKNCSSDREKLLKFEAEGREFAKILRSLEQFIQTVKGQNNFW
Number of Associated Samples	53
Number of Associated Scaffolds	135

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	83.70 %
% of genes from short scaffolds (< 2000 bps)	98.52 %
Associated GOLD sequencing projects	45
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (91.852 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine (48.148 % of family members)
Environment Ontology (ENVO)	Unclassified (62.963 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (89.630 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.52% β-sheet: 0.00% Coil/Unstructured: 46.48%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 135 Family Scaffolds
PF00876	Innexin	2.22
PF03271	EB1	0.74
PF11540	Dynein_IC2	0.74
PF04923	Ninjurin	0.74
PF00067	p450	0.74
PF00378	ECH_1	0.74
PF00066	Notch	0.74
PF13840	ACT_7	0.74
PF14969	DUF4508	0.74
PF12874	zf-met	0.74

COG ID	Name	Functional Category	% Frequency in 135 Family Scaffolds
COG2124	Cytochrome P450	Defense mechanisms [V]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.85 %
All Organisms	root	All Organisms	8.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.85 %
cellular organisms	root	All Organisms → cellular organisms	8.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.85 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	8.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.85 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	8.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.85 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	7.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.85 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	7.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.85 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	7.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.85 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	7.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.85 %
Ecdysozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa	7.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.85 %
Panarthropoda	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda	7.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.85 %
Arthropoda	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda	7.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.85 %
Mandibulata	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata	7.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.85 %
Pancrustacea	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea	7.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.85 %
Crustacea	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea	6.67 %
Hexapoda	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.85 %
Multicrustacea	superclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea	6.67 %
Insecta	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.85 %
Hexanauplia	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia	6.67 %
Dicondylia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.85 %
Copepoda	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda	6.67 %
Pterygota	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.85 %
Neocopepoda	infraclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda	6.67 %
Neoptera	infraclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.85 %
Podoplea	superorder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Podoplea	2.22 %
Gymnoplea	superorder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea	0.74 %
Neoptera	infraclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.85 %
Calanoida	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida	0.74 %
Harpacticoida	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Podoplea → Harpacticoida	0.74 %
Cyclopoida	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Podoplea → Cyclopoida	0.74 %
Neoptera	infraclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.85 %
Cyclopettidae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Podoplea → Cyclopoida → Cyclopettidae	0.74 %
Harpacticidae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Podoplea → Harpacticoida → Harpacticidae	0.74 %
Temoridae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae	0.74 %
Neoptera	infraclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.85 %
Paracyclopina	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Podoplea → Cyclopoida → Cyclopettidae → Paracyclopina	0.74 %
Tigriopus	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Podoplea → Harpacticoida → Harpacticidae → Tigriopus	0.74 %
Eurytemora	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora	0.74 %
Neoptera	infraclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.85 %
Paracyclopina nana	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Podoplea → Cyclopoida → Cyclopettidae → Paracyclopina → Paracyclopina nana	0.74 %
Tigriopus californicus	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Podoplea → Harpacticoida → Harpacticidae → Tigriopus → Tigriopus californicus	0.74 %
Eurytemora affinis	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis	0.74 %
Neoptera	infraclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002033\|GOS24894_10224961	Not Available	1542	Open in IMG/M
3300002040\|GOScombined01_102442188	Not Available	1542	Open in IMG/M
3300002040\|GOScombined01_105983323	Not Available	905	Open in IMG/M
3300007957\|Ga0105742_1043947	Not Available	602	Open in IMG/M
3300007957\|Ga0105742_1056328	Not Available	559	Open in IMG/M
3300007958\|Ga0105743_1049342	Not Available	506	Open in IMG/M
3300007972\|Ga0105745_1263131	Not Available	556	Open in IMG/M
3300008998\|Ga0103502_10044191	Not Available	1478	Open in IMG/M
3300009432\|Ga0115005_11585715	Not Available	537	Open in IMG/M
3300009436\|Ga0115008_10430804	Not Available	937	Open in IMG/M
3300009436\|Ga0115008_10467631	Not Available	898	Open in IMG/M
3300009436\|Ga0115008_10539700	Not Available	835	Open in IMG/M
3300009436\|Ga0115008_10572071	Not Available	812	Open in IMG/M
3300009436\|Ga0115008_10587796	Not Available	801	Open in IMG/M
3300009436\|Ga0115008_10597390	Not Available	794	Open in IMG/M
3300009436\|Ga0115008_10660213	Not Available	757	Open in IMG/M
3300009436\|Ga0115008_10667334	Not Available	753	Open in IMG/M
3300009436\|Ga0115008_10684507	Not Available	743	Open in IMG/M
3300009436\|Ga0115008_10745658	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis	714	Open in IMG/M
3300009436\|Ga0115008_10833681	Not Available	678	Open in IMG/M
3300009436\|Ga0115008_10837569	Not Available	676	Open in IMG/M
3300009436\|Ga0115008_10876940	Not Available	662	Open in IMG/M
3300009436\|Ga0115008_10890416	Not Available	657	Open in IMG/M
3300009436\|Ga0115008_10901078	Not Available	654	Open in IMG/M
3300009436\|Ga0115008_10967071	Not Available	633	Open in IMG/M
3300009436\|Ga0115008_10987906	Not Available	627	Open in IMG/M
3300009436\|Ga0115008_11023608	Not Available	617	Open in IMG/M
3300009436\|Ga0115008_11235318	Not Available	568	Open in IMG/M
3300009436\|Ga0115008_11236459	Not Available	568	Open in IMG/M
3300009436\|Ga0115008_11239653	Not Available	567	Open in IMG/M
3300009436\|Ga0115008_11274032	Not Available	560	Open in IMG/M
3300009436\|Ga0115008_11293407	Not Available	557	Open in IMG/M
3300009436\|Ga0115008_11296725	Not Available	556	Open in IMG/M
3300009436\|Ga0115008_11317319	Not Available	552	Open in IMG/M
3300009436\|Ga0115008_11357417	Not Available	545	Open in IMG/M
3300009436\|Ga0115008_11373149	Not Available	542	Open in IMG/M
3300009436\|Ga0115008_11401489	Not Available	537	Open in IMG/M
3300009436\|Ga0115008_11435397	Not Available	532	Open in IMG/M
3300009436\|Ga0115008_11437663	Not Available	532	Open in IMG/M
3300009436\|Ga0115008_11476978	Not Available	525	Open in IMG/M
3300009436\|Ga0115008_11544572	Not Available	514	Open in IMG/M
3300009436\|Ga0115008_11585829	Not Available	508	Open in IMG/M
3300009436\|Ga0115008_11599892	Not Available	505	Open in IMG/M
3300009436\|Ga0115008_11608056	Not Available	504	Open in IMG/M
3300009544\|Ga0115006_11108656	Not Available	705	Open in IMG/M
3300009544\|Ga0115006_12035260	Not Available	529	Open in IMG/M
3300009550\|Ga0115013_10771966	Not Available	661	Open in IMG/M
3300009790\|Ga0115012_11363154	Not Available	603	Open in IMG/M
3300013010\|Ga0129327_10809001	Not Available	532	Open in IMG/M
3300013010\|Ga0129327_10824121	Not Available	528	Open in IMG/M
3300013010\|Ga0129327_10888231	Not Available	511	Open in IMG/M
3300017697\|Ga0180120_10174726	Not Available	900	Open in IMG/M
3300017767\|Ga0181406_1210178	Not Available	576	Open in IMG/M
3300018657\|Ga0192889_1058056	Not Available	524	Open in IMG/M
3300018704\|Ga0192954_1002983	Not Available	1521	Open in IMG/M
3300018704\|Ga0192954_1006388	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda	1209	Open in IMG/M
3300018704\|Ga0192954_1017360	Not Available	874	Open in IMG/M
3300018707\|Ga0192876_1058315	Not Available	591	Open in IMG/M
3300018707\|Ga0192876_1060279	Not Available	573	Open in IMG/M
3300018717\|Ga0192964_1106144	Not Available	504	Open in IMG/M
3300018770\|Ga0193530_1014979	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda	1456	Open in IMG/M
3300018792\|Ga0192956_1132018	Not Available	573	Open in IMG/M
3300018834\|Ga0192877_1110663	Not Available	709	Open in IMG/M
3300018845\|Ga0193042_1042540	Not Available	1375	Open in IMG/M
3300018845\|Ga0193042_1088209	Not Available	848	Open in IMG/M
3300018845\|Ga0193042_1158662	Not Available	501	Open in IMG/M
3300018903\|Ga0193244_1055205	Not Available	733	Open in IMG/M
3300018909\|Ga0193160_10056369	Not Available	631	Open in IMG/M
3300018930\|Ga0192955_10036219	Not Available	1061	Open in IMG/M
3300018930\|Ga0192955_10041203	Not Available	1017	Open in IMG/M
3300018930\|Ga0192955_10042309	Not Available	1008	Open in IMG/M
3300018930\|Ga0192955_10108765	Not Available	696	Open in IMG/M
3300018930\|Ga0192955_10109305	Not Available	695	Open in IMG/M
3300018930\|Ga0192955_10172550	Not Available	557	Open in IMG/M
3300018930\|Ga0192955_10173394	Not Available	556	Open in IMG/M
3300018961\|Ga0193531_10088880	Not Available	1209	Open in IMG/M
3300018961\|Ga0193531_10276011	Not Available	592	Open in IMG/M
3300018974\|Ga0192873_10177597	Not Available	933	Open in IMG/M
3300018974\|Ga0192873_10325747	Not Available	645	Open in IMG/M
3300018974\|Ga0192873_10337866	Not Available	628	Open in IMG/M
3300018979\|Ga0193540_10036371	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda	1160	Open in IMG/M
3300018979\|Ga0193540_10136367	Not Available	688	Open in IMG/M
3300018979\|Ga0193540_10221790	Not Available	514	Open in IMG/M
3300018981\|Ga0192968_10053103	Not Available	1112	Open in IMG/M
3300018981\|Ga0192968_10079198	Not Available	888	Open in IMG/M
3300018981\|Ga0192968_10147888	Not Available	609	Open in IMG/M
3300018982\|Ga0192947_10194183	Not Available	669	Open in IMG/M
3300019000\|Ga0192953_10130648	Not Available	623	Open in IMG/M
3300019010\|Ga0193044_10075023	Not Available	1114	Open in IMG/M
3300019010\|Ga0193044_10190057	Not Available	656	Open in IMG/M
3300019010\|Ga0193044_10203635	Not Available	627	Open in IMG/M
3300019010\|Ga0193044_10232138	Not Available	575	Open in IMG/M
3300019010\|Ga0193044_10245060	Not Available	554	Open in IMG/M
3300019010\|Ga0193044_10266519	Not Available	523	Open in IMG/M
3300019012\|Ga0193043_10115081	Not Available	1179	Open in IMG/M
3300019012\|Ga0193043_10134710	Not Available	1062	Open in IMG/M
3300019012\|Ga0193043_10226521	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Podoplea → Harpacticoida → Harpacticidae → Tigriopus → Tigriopus californicus	725	Open in IMG/M
3300019012\|Ga0193043_10354267	Not Available	511	Open in IMG/M
3300019017\|Ga0193569_10056836	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda	1661	Open in IMG/M
3300019017\|Ga0193569_10058105	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda	1646	Open in IMG/M
3300019017\|Ga0193569_10114966	Not Available	1218	Open in IMG/M
3300019017\|Ga0193569_10121496	Not Available	1183	Open in IMG/M
3300019020\|Ga0193538_10071493	Not Available	1279	Open in IMG/M
3300019020\|Ga0193538_10128414	Not Available	918	Open in IMG/M
3300019020\|Ga0193538_10166817	Not Available	773	Open in IMG/M
3300019022\|Ga0192951_10389353	Not Available	528	Open in IMG/M
3300019024\|Ga0193535_10053494	All Organisms → cellular organisms → Eukaryota → Opisthokonta	1250	Open in IMG/M
3300019024\|Ga0193535_10142589	Not Available	779	Open in IMG/M
3300019100\|Ga0193045_1065672	Not Available	563	Open in IMG/M
3300019111\|Ga0193541_1016076	Not Available	1100	Open in IMG/M
3300019126\|Ga0193144_1054648	Not Available	682	Open in IMG/M
3300019151\|Ga0192888_10058296	Not Available	1312	Open in IMG/M
3300019151\|Ga0192888_10065581	Not Available	1236	Open in IMG/M
3300019151\|Ga0192888_10072939	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera	1167	Open in IMG/M
3300019151\|Ga0192888_10197995	Not Available	611	Open in IMG/M
3300019152\|Ga0193564_10042414	Not Available	1397	Open in IMG/M
3300019152\|Ga0193564_10165572	Not Available	686	Open in IMG/M
3300027833\|Ga0209092_10326195	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Podoplea → Cyclopoida → Cyclopettidae → Paracyclopina → Paracyclopina nana	823	Open in IMG/M
3300027833\|Ga0209092_10476919	Not Available	641	Open in IMG/M
3300027833\|Ga0209092_10505121	Not Available	617	Open in IMG/M
3300027833\|Ga0209092_10637126	Not Available	529	Open in IMG/M
3300030702\|Ga0307399_10640313	Not Available	526	Open in IMG/M
3300031522\|Ga0307388_10825646	Not Available	623	Open in IMG/M
3300031737\|Ga0307387_10001365	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Podoplea	4745	Open in IMG/M
3300031737\|Ga0307387_10412704	Not Available	825	Open in IMG/M
3300031739\|Ga0307383_10385063	Not Available	688	Open in IMG/M
3300031739\|Ga0307383_10452057	Not Available	636	Open in IMG/M
3300031743\|Ga0307382_10026004	Not Available	2019	Open in IMG/M
3300031750\|Ga0307389_10631383	Not Available	695	Open in IMG/M
3300031750\|Ga0307389_10736798	Not Available	644	Open in IMG/M
3300031750\|Ga0307389_10837089	Not Available	605	Open in IMG/M
3300032088\|Ga0315321_10298238	Not Available	1029	Open in IMG/M
3300032713\|Ga0314690_10631478	Not Available	523	Open in IMG/M
3300032752\|Ga0314700_10557756	Not Available	607	Open in IMG/M
3300033572\|Ga0307390_10762926	Not Available	609	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Unclassified	48.15%
Oceanic	Environmental → Aquatic → Marine → Oceanic	42.96%
Coastal	Environmental → Aquatic → Marine → Coastal	5.93%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	2.22%
Strait	Environmental → Aquatic → Marine → Strait	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	48.15%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	42.96%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	5.93%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	2.22%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	48.15%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	41.48%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	2.96%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	2.96%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	1.48%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	1.48%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	0.74%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002033	Marine microbial communities from the Sargasso Sea - GS000a &b	Environmental	Open in IMG/M
3300002040	GS000c - Sargasso Station 3	Environmental	Open in IMG/M
3300007957	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1459A_3.0um	Environmental	Open in IMG/M
3300007958	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1459BC_3.0um	Environmental	Open in IMG/M
3300007972	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460ABC_3.0um	Environmental	Open in IMG/M
3300008998	Eukaryotic communities of water from different depths collected during the Tara Oceans expedition - TARA_A100000548	Environmental	Open in IMG/M
3300009432	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean - Greenland ARC118M Metagenome	Environmental	Open in IMG/M
3300009436	Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M Metagenome	Environmental	Open in IMG/M
3300009544	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean- Svalbard ARC20M Metagenome	Environmental	Open in IMG/M
3300009550	Marine eukaryotic phytoplankton communities from Atlantic Ocean - South Atlantic ANT15 Metagenome	Environmental	Open in IMG/M
3300009790	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 Metagenome	Environmental	Open in IMG/M
3300013010	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_DNA	Environmental	Open in IMG/M
3300017697	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)	Environmental	Open in IMG/M
3300017767	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 29 SPOT_SRF_2011-12-20	Environmental	Open in IMG/M
3300018657	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_068 - TARA_N000000705 (ERX1789382-ERR1719418)	Environmental	Open in IMG/M
3300018704	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_082 - TARA_N000001396 (ERX1782253-ERR1711956)	Environmental	Open in IMG/M
3300018707	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_067 - TARA_N000000746 (ERX1789613-ERR1719509)	Environmental	Open in IMG/M
3300018717	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_084 - TARA_N000001362 (ERX1789634-ERR1719196)	Environmental	Open in IMG/M
3300018770	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_152 - TARA_N000002783 (ERX1789454-ERR1719490)	Environmental	Open in IMG/M
3300018792	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_082 - TARA_N000001398 (ERX1782120-ERR1711892)	Environmental	Open in IMG/M
3300018834	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_067 - TARA_N000000746 (ERX1789722-ERR1719319)	Environmental	Open in IMG/M
3300018845	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_081 - TARA_N000001426 (ERX1809760-ERR1740122)	Environmental	Open in IMG/M
3300018903	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_080 - TARA_N000001499 (ERX1789636-ERR1719512)	Environmental	Open in IMG/M
3300018909	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_025 - TARA_A100000402 (ERX1782377-ERR1712208)	Environmental	Open in IMG/M
3300018930	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_082 - TARA_N000001396 (ERX1782254-ERR1712008)	Environmental	Open in IMG/M
3300018961	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_152 - TARA_N000002783 (ERX1789414-ERR1719458)	Environmental	Open in IMG/M
3300018974	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_066 - TARA_N000000809 (ERX1782160-ERR1711971)	Environmental	Open in IMG/M
3300018979	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_153 - TARA_N000002817 (ERX1782403-ERR1712037)	Environmental	Open in IMG/M
3300018981	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_084 - TARA_N000001440 (ERX1782157-ERR1712238)	Environmental	Open in IMG/M
3300018982	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_082 - TARA_N000001384 (ERX1782271-ERR1711935)	Environmental	Open in IMG/M
3300019000	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_082 - TARA_N000001394 (ERX1782320-ERR1712129)	Environmental	Open in IMG/M
3300019010	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_081 - TARA_N000001428 (ERX1809462-ERR1739838)	Environmental	Open in IMG/M
3300019012	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_081 - TARA_N000001426 (ERX1809764-ERR1740129)	Environmental	Open in IMG/M
3300019017	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_152 - TARA_N000002781	Environmental	Open in IMG/M
3300019020	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_153 - TARA_N000002813 (ERX1789673-ERR1719264)	Environmental	Open in IMG/M
3300019022	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_082 - TARA_N000001390 (ERX1782474-ERR1712194)	Environmental	Open in IMG/M
3300019024	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_152 - TARA_N000002797 (ERX1789427-ERR1719237)	Environmental	Open in IMG/M
3300019100	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_081 - TARA_N000001428 (ERX1809468-ERR1739839)	Environmental	Open in IMG/M
3300019111	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_153 - TARA_N000002817 (ERX1782321-ERR1712210)	Environmental	Open in IMG/M
3300019126	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_022 - TARA_A100000695 (ERX1782402-ERR1712043)	Environmental	Open in IMG/M
3300019151	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_068 - TARA_N000000705 (ERX1789682-ERR1719501)	Environmental	Open in IMG/M
3300019152	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_150 - TARA_N000002717	Environmental	Open in IMG/M
3300027833	Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M Metagenome (SPAdes)	Environmental	Open in IMG/M
3300030702	Metatranscriptome of marine eukaryotic phytoplankton communities from Antarctic Ocean - PS103-14 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031522	Metatranscriptome of marine eukaryotic phytoplankton communities from South Atlantic Ocean ? PS103-3.R2 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031737	Metatranscriptome of marine eukaryotic phytoplankton communities from South Atlantic Ocean ? PS103-3.R1 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031739	Metatranscriptome of marine eukaryotic phytoplankton communities from South Atlantic Ocean ? PS103-1.R3 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031743	Metatranscriptome of marine eukaryotic phytoplankton communities from South Atlantic Ocean ? PS103-1.R2 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031750	Metatranscriptome of marine eukaryotic phytoplankton communities from South Atlantic Ocean ? PS103-3.R3 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300032088	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 21515	Environmental	Open in IMG/M
3300032713	Metatranscriptome of seawater microbial communities from Espelandsvegen Fjord, Bergen, Norway - Plim5_22May_sur (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300032752	Metatranscriptome of seawater microbial communities from Espelandsvegen Fjord, Bergen, Norway - Plim7_26May_deep (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300033572	Metatranscriptome of marine eukaryotic phytoplankton communities from South Atlantic Ocean ? PS103-4.R1 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GOS24894_102249613	3300002033	Marine	VRKNCSSDREIEAEGREFAKVLRSLEQFIQTVKGQNNFW
GOScombined01_1024421883	3300002040	Marine	VRKNCSSDREIEAEGREFAKVLRSLEQFIQTVKGQNNFW*
GOScombined01_1059833233	3300002040	Marine	IVRPTVRKNCSSDREIEAEGREFAKVLRSLEQFIQTVKGQNNFW*
Ga0105742_10439471	3300007957	Estuary Water	CEKKKSGDRKKLLKFEAEGQEFAISLEQFIETVKGQNNFW*
Ga0105742_10563281	3300007957	Estuary Water	VRKNCYNDREKLLKFEAEGREFAKFLRSLEQFIQTVKGQNNFWYTE
Ga0105743_10493421	3300007958	Estuary Water	VRKKCSSDREKLLKFEAEGQEFAKILRSSEQFIQT
Ga0105745_12631311	3300007972	Estuary Water	EKLLKFKAESREFAKFLRSLNRTIYSNSAVKGHNNFWKQNAF*
Ga0103502_100441911	3300008998	Marine	VRKNCSSYQEKLLKFGAEGHDFAKFLRSLGQFVQTVK
Ga0115005_115857151	3300009432	Marine	EKLLKFEAEGREFAKFLRSLEQFVQTAKGQTNFW*
Ga0115008_104308041	3300009436	Marine	PTVRKNCSSDREKLLKFKAEGGEFSKSSRSLEQFIQTVKGQNNFL*
Ga0115008_104676311	3300009436	Marine	VRKKCLRDSEKLLKLEAEGQEFAQILRSLEQLVQTVKG
Ga0115008_105397001	3300009436	Marine	VRKDCSNDREKLLKLEAEGREFAKFLRSLEQFIQAVKGQNN
Ga0115008_105720712	3300009436	Marine	RKNCSSDQEKILKFEAEGREFSNILRSQEQFIQAMKGQNNW*
Ga0115008_105877961	3300009436	Marine	TVRKNCSTDEKLLKFEAEGREFAKILRSLEQFIQTVKGQNNFW
Ga0115008_105973901	3300009436	Marine	VRKNCSSDREKLLKFESEGREFANILRLLEQFIQT
Ga0115008_106602131	3300009436	Marine	VRKNCSSDQEKLLKFEAEGREFAKILRSLEQFIQTVKGQNN
Ga0115008_106673341	3300009436	Marine	KKNLLKFETEGGEIAKILRSQEQFTQTVKGQNSF*
Ga0115008_106845071	3300009436	Marine	KSDREKVFIFEAEGREFEKFLRSLEQSIQTVNNFW*
Ga0115008_107456581	3300009436	Marine	VRKNCSSDREKLLKFEAEGRVFAKFLRSLEQFIQTVKGQNNFWQQNPF*
Ga0115008_108336811	3300009436	Marine	VRKNCSSDQEILLKFDAEGREFVKFLKSQEQFIQTVKGHSEQFRVTE
Ga0115008_108375691	3300009436	Marine	PKLFLHTVRKNCSSDREKLLTCEAEGREFAKLLRSLDQFI*
Ga0115008_108769401	3300009436	Marine	NYSSDENILKFEAEGECSKFLRSPEQFIQTVKGQNNLW*
Ga0115008_108904161	3300009436	Marine	SSDREKLLKFEAEGEFANILKSLKQFFQTVEGQNNFW
Ga0115008_109010781	3300009436	Marine	KNCSSDENLLKFEAEGREFAKLLRSLEQFIQAVKVSNNFC
Ga0115008_109670711	3300009436	Marine	VRKNCSSDREKLLKSEAEHREFAKLLRSLEQFIQTVKGQNN
Ga0115008_109879062	3300009436	Marine	CSSDREKLLKFEAEGREFSKFLRSLEQFIQTVKGQNNLW*
Ga0115008_110236081	3300009436	Marine	TVRKKCSSDREILLKFEAEGQEFAKILRSLEHFIHTVKVQKNFW*
Ga0115008_112353181	3300009436	Marine	MRKIFFSDREKLLKFEAEGQEFENYLRSLEQFIQTVKGQNNF
Ga0115008_112364591	3300009436	Marine	TYCKRKKSSDQEKLLKFKTEGREFAKFLRSLEQFIKKVKGQNNFW*
Ga0115008_112396531	3300009436	Marine	MRKNCSTDQEKLLKFVAEGRVFAKILRHLEQFIQTVKGQNNF
Ga0115008_112740321	3300009436	Marine	KCSSDLEKLLKFEAEDQEFVEFLSLEQFIQTVKGQNNFW
Ga0115008_112934071	3300009436	Marine	QEKLLKFESEGREFAKILRSHGQFIQTVKGQNNSW*
Ga0115008_112967251	3300009436	Marine	VRKKCCSDQEKKMEFEAEGREFATHYRSLEQLIQTVKGQNNFLTEVFL
Ga0115008_113173191	3300009436	Marine	PTVRKNCFGDREKLLKFEAEGREFEKFLRSLEQFIQTVKGKNNFW*
Ga0115008_113574172	3300009436	Marine	EKNCARDREKLQKFKTEGQEFAKILRSLEQFIQTVKGQNNFWYKNAFLTCS*
Ga0115008_113731491	3300009436	Marine	TVRKNCSSDREKLLKFEAEGREFAKFLRSLEQIIQIAKGQKYFW*
Ga0115008_114014891	3300009436	Marine	PTVRKNCSSDREKLLKFEAEGREFSNFLRLLEQFIQTVKGQNNFW*
Ga0115008_114353971	3300009436	Marine	VRKNCSPDREKLLKFEAEGREFENFLRSLEQFIQTVKGQNIFW
Ga0115008_114376631	3300009436	Marine	VRKNCSIDRKKVLKYKAEGREFAKFLRQLEQFIQAVKGQNN
Ga0115008_114769781	3300009436	Marine	SDREKLLKFEAEGQEFAKILQSLEQCIQTVKGQNNFW*
Ga0115008_115445721	3300009436	Marine	CSSDENILKFEAEGKEFAKFLRSLEEFIQTVKS
Ga0115008_115858291	3300009436	Marine	EIILKFKVEGREFAITLRSLEQFIETVKGQNNFW*
Ga0115008_115998921	3300009436	Marine	VRKKCSSDREKILKFEAEGREFANILRSLKQFIQTVKGQ
Ga0115008_116080561	3300009436	Marine	VRKNCSSDREKLLKFEIEDREFAKILKSLEQFIQNIERSEQF
Ga0115006_111086561	3300009544	Marine	VRENCSSDCEKLLKLKAEGREFAKNFRSLELFIQTVKGQNNFW*
Ga0115006_120352601	3300009544	Marine	VRKNCSRDQEKLCKFEAEGQEFAIFLISLEQFIQIVKGQDNFW*
Ga0115013_107719662	3300009550	Marine	FPTVRKNCFSDEKLLKFETEGEFAKFLRSLEQFIQTVDGQ
Ga0115012_113631541	3300009790	Marine	VRKNYSSDREKLMKFEAEGREFAKFLRSLEQFIQTVRGQNNFW*
Ga0129327_108090011	3300013010	Freshwater To Marine Saline Gradient	VKKNCTIDREKVWKFEAEGLEFAKCLRSLQQFIQTVKGQTVFGNRILF*
Ga0129327_108241211	3300013010	Freshwater To Marine Saline Gradient	DETLLEFDAEGRDFAKFLRLEQFIQTVKGQNNFW*
Ga0129327_108882311	3300013010	Freshwater To Marine Saline Gradient	KLFRPTVRKKCSGDCEKLLKFLAFSLEFAKILGSLEQFIQAVKGQNNIW*
Ga0180120_101747261	3300017697	Freshwater To Marine Saline Gradient	LLKFEAEGQESGKFLRSLKRFIQTVKGQNNFGNRMFF
Ga0181406_12101781	3300017767	Seawater	VRKNCASDPEKLLKFEAEGQEVAKCLRTLEQSIQAVKGQNNFW
Ga0192889_10580561	3300018657	Marine	PTVRKNCSSDREKLLKFEAEGREFAKFLRSLEQFIQTER
Ga0192954_10029832	3300018704	Marine	VRKNDPSDVEKLLKFKVRDRELAKFLRSLEPFIQTVKGPTNFRNGMLF
Ga0192954_10063882	3300018704	Marine	MRKNCSSDREKLLEFEAEGREFAKFLRYLEQFIQTVKGLKN
Ga0192954_10173602	3300018704	Marine	LPKLCXPIVRKTCSSDXEKLLKFEAEDLKFAKILRSIKQFIQAVKGQNNFX
Ga0192876_10583151	3300018707	Marine	IVRKNCFSDREKLLKFKAEGREFAKFLRSLGQFIQTVKGQKKFW
Ga0192876_10602791	3300018707	Marine	DREKLLKFEAEGREFAKFLRSLEQFIQTVKGQNNFW
Ga0192964_11061441	3300018717	Marine	VRKNCSSDREKLLKFEAEGREFAKILRSLEQFIQTVKGQNN
Ga0193530_10149791	3300018770	Marine	TVKKKCSRDPEILLKLEAEGREFAKILRSLEHFIRTVKGQNYSW
Ga0192956_11320181	3300018792	Marine	KNSSSDREKLLKFEAGGREFAKFLRSLEQFIQTVKGQDNFW
Ga0192877_11106631	3300018834	Marine	PILRKSCSSDREKLLKFEAEGXDFGKFLSSLNQFIQTVKG
Ga0193042_10425401	3300018845	Marine	VRKNCSCDREKILKFEAEGRESGKILRSLEQFAQTVKGQNNFW
Ga0193042_10882091	3300018845	Marine	VRNNRSSDGEKLLKFEAEGREFSKFLRSLEQFIQIVKGQNNPW
Ga0193042_11586621	3300018845	Marine	VRKKCSNDRENFLKFKADGREFAKTVRSLEQFIQTVKDQNNVW
Ga0193244_10552052	3300018903	Marine	RKNCSSDXEKFLKFEAEGREFAKFLRSLEQFIQTVKGQNNFW
Ga0193160_100563691	3300018909	Marine	CSRYREKLLKFEDEGREFAKFLGSLEQFIQTVKGQINFL
Ga0192955_100362192	3300018930	Marine	VRKNDPSDVEKLLKFKVRDRELAKFLRSLEPFIQTVKGPTNFRNRMLF
Ga0192955_100412032	3300018930	Marine	DREKLLKFEAEGREFAKKLRSLEQFIQTVKGRNNF
Ga0192955_100423091	3300018930	Marine	RKNCSSDREKLLKFEAEGREFAKILRSLEQFIQTVKG
Ga0192955_101087651	3300018930	Marine	CSSDREKLLKFEAEGREFGKFLRSLEQFIQTVKGQNNLW
Ga0192955_101093051	3300018930	Marine	SDREKLLKFEAEGREFAKLLRSLEQFIQAVKGQNNFW
Ga0192955_101725501	3300018930	Marine	RKNCSSDXEKLLKFEAEGXDFANFLSSLNQFIQTVKS
Ga0192955_101733941	3300018930	Marine	VRKNCSSDQEKLLRFEAEGLEISKNLRSLEQFNQTVKGQNNLW
Ga0193531_100888801	3300018961	Marine	KNRSSDXEKLLKFEAEGQEFAKILRSLEQFVXTEKGQKIFW
Ga0193531_102760111	3300018961	Marine	SDQEKLLKFEAEGREFAKLLRSLEQLVQTVKVQNNFW
Ga0192873_101775971	3300018974	Marine	VRKNHSSDREKLLKFEAEGQELAKFLRSLEQFIQTVKVQNNFC
Ga0192873_103257471	3300018974	Marine	RKKCSSDQEKLLKFKAEGREFAKILRSLEKFIHTV
Ga0192873_103378662	3300018974	Marine	TKIVLTYCGKKCSSDQEKLLKFKAEGREFLKFLRSLEKFIQTVKG
Ga0193540_100363712	3300018979	Marine	VRKNCSSDREKLLKFEAEGQEFAKFLRSREQFIQTVKGQNNFW
Ga0193540_101363672	3300018979	Marine	VTKNCSSDCEKLLKFEAEGGEFAKYLRSLEQFIQTVKGQ
Ga0193540_102217902	3300018979	Marine	VRKNCSSDREKLLKFEAEGREFSKFLRSLEQFIQTAKGQNNSW
Ga0192968_100531032	3300018981	Marine	VRKNCSSDQEKLLKFEAEGREFAKILRSLEQFIQTVKGQNNF
Ga0192968_100791981	3300018981	Marine	RKNCSSDREKLLKFEAEGQEFANFLRSLKQFIQTVKGQNNFW
Ga0192968_101478881	3300018981	Marine	VRKNCSSDREKLLKFEAEGREFAKILRSLEQFIQTVKGQNNFW
Ga0192947_101941831	3300018982	Marine	SDREKLLKFEAEGREFAKILRSLEQFIQTVKGQNNFW
Ga0192953_101306481	3300019000	Marine	VRKKFSSDQETLLKYEAEGQKFAKFLRSLEKFIQTVPM
Ga0193044_100750232	3300019010	Marine	GDREKHLKFKAEGQEFAIFLRSLEQFIQTVKGQNNFG
Ga0193044_101900571	3300019010	Marine	REKLLKFEAEGGEFAQFLRSLEQFIQTVKCQNNFW
Ga0193044_102036351	3300019010	Marine	VRKDCSIDQEKLLKFEAEGQEFAKILKSLEKFIQTVKGQNNFW
Ga0193044_102321381	3300019010	Marine	PTVRKNCSSDREKLLKFEVEGREFAKVLISLEQFV
Ga0193044_102450601	3300019010	Marine	VRRNGSSVLEKLLKLEAEGREFAKLLRSLEQFIQTVKGQ
Ga0193044_102665191	3300019010	Marine	VRKYCSSDPEKVLKIEAEGREFSNFLRSLEQFIQTVKG
Ga0193043_101150811	3300019012	Marine	SLPQLFXPTVRKNCYSDREKNLKFEAEGQELANFLRSLE
Ga0193043_101347101	3300019012	Marine	RCSSDSEIFLKLEAEDREFVKILRSLEQFNRPGKGQTIVVTE
Ga0193043_102265212	3300019012	Marine	EKKKCSSEQEKLLKFEGEGQDFARFLRSLEQFTVKRPNNFW
Ga0193043_103542672	3300019012	Marine	VRNKCSSDREKLLKLKAKGLELGKNLRSLEQFIRKVKGQNNV
Ga0193569_100568363	3300019017	Marine	CSRDPEKLLKLEAEGREFAKILRSLEHFIRTVKGQNYSW
Ga0193569_100581053	3300019017	Marine	CSRDPEKLLKLEAEGREFSKILRSLEQFIRTMKGQKNFW
Ga0193569_101149661	3300019017	Marine	GKNCSSDXEKLLKFEAKGREFSRILRSVEQFVQTVKGQNNFGNRMLF
Ga0193569_101214962	3300019017	Marine	VRKKCSNDREIFLKFKADGREFAKTVRSLEQFIQTVKDQNNVW
Ga0193538_100714931	3300019020	Marine	MVFYYPNCSSDTEKLLKFEAEGXEFAKEIISLEQFIQTVKGQNSFW
Ga0193538_101284141	3300019020	Marine	KKCSRDREKLLKFEAEGXEFAKFLRSLEHFIQTVKGQKNVW
Ga0193538_101668171	3300019020	Marine	VRKNCSSDXEKLLKFEAEGREFSKFLRSLEQFIQTVKGQNIFW
Ga0192951_103893531	3300019022	Marine	VRKNCSSDREKLLKFEAEGRNFLNVLRSLEQIIQTVKGQNNFW
Ga0193535_100534941	3300019024	Marine	VRKSCSSDREKILKFEAVGREFEKILRSLEGFIQTVKGQKMF
Ga0193535_101425891	3300019024	Marine	TYCEKNYSSDREKHLKFKAEGQEFAIFLRSLEQFIQTVKGQNNFG
Ga0193045_10656721	3300019100	Marine	SRDPEILLKLEAEGREFEKLLRSLEQFIRTMKGQKNFW
Ga0193541_10160761	3300019111	Marine	VRKNYSSDREKLLKFMAEGREFSKCLRSLEQFIQTVKGQNNFW
Ga0193144_10546481	3300019126	Marine	VRKNYSSDREKLVKFEAEGRELANFLISLEQFIRS
Ga0192888_100582961	3300019151	Marine	SDREKLLKFEAEGQEFAKILRSIEQFIQTVKGQTKLL
Ga0192888_100655811	3300019151	Marine	KIVLTYCEKNCSSDQEKLLKFKAEGREFAKFLRSLERVKGQNNFW
Ga0192888_100729391	3300019151	Marine	REKLLKFEAEGREFAKFLKSLEQSIQTVKGQNNFW
Ga0192888_101979952	3300019151	Marine	VRKNCSSDREKLLKFEAEGREFAKFLRSLEQFIQTVK
Ga0193564_100424141	3300019152	Marine	FXPTVRKNCSSDREKLLKFEAEGREFSKFLRSLEQFMQTAKGQNNFL
Ga0193564_101655722	3300019152	Marine	VRKNXSSDREKLLKFKAEGREFANILISLEQFVGTVKGQNNF
Ga0209092_103261952	3300027833	Marine	VRKNCSSDQEKLLKFQAEGREFAKFLKSLEHFFQTVKGRNNF
Ga0209092_104769192	3300027833	Marine	IAKKECSNDQQKLLKFKAEGRELAKFLKSLVQFVQTVKGQKNFCQQDSFLACS
Ga0209092_105051211	3300027833	Marine	SSDXEKLLKFEAEGREFAKILRSLEQFIQTVKGQNNFW
Ga0209092_106371261	3300027833	Marine	TVQEKLLKFEAEDREIANILRSLEQFIQAVKHLNNF
Ga0307399_106403131	3300030702	Marine	VRKNCSSDREKLLKFEAEGREFAKILRSLEQFIQTVK
Ga0307388_108256461	3300031522	Marine	VRKNCSSDRENFLKFEAEGREFVKKLRSLEQFIQTVEGQNN
Ga0307387_100013651	3300031737	Marine	RKNCSSDREKLLKFEAEGREFAKILRSLEQFIQTVKGQNNFW
Ga0307387_104127041	3300031737	Marine	RKNCSSDREKLLKFEAEGREFAKILRSLEQFIQTVKGQNNFR
Ga0307383_103850631	3300031739	Marine	KNCSSDREKLLKFEAEGREFAKILRSLGQFIQTVKGQNNFW
Ga0307383_104520571	3300031739	Marine	VRKKCSSDTEKPLKFVAEGREFAKILRSLEQFIQTVKGQNNFW
Ga0307382_100260041	3300031743	Marine	REKVLKFEAEGREFAKILRSLEHEQFIQTVKGQNNFW
Ga0307389_106313831	3300031750	Marine	VRKKCSSDQEKLLKFEDEDREFSKILISHEKFIGTAKSQNNFLNRTFF
Ga0307389_107367981	3300031750	Marine	PTVRKKCSSDREKLLKFEAEGREVSKFLRSLEQFIQTVKGQNNFC
Ga0307389_108370891	3300031750	Marine	VRKYYSSDREKLLKFEAEGREFANFLRSLEQYIQTVKSQNAFLTF
Ga0315321_102982381	3300032088	Seawater	CSSDREKLLKFEAEGREFAKFLRSLEQFIQTVKGQNNFW
Ga0314690_106314781	3300032713	Seawater	VRTNCSRDQEELLRFEAEGREFAKILRSLEKFIQTVKTIFDN
Ga0314700_105577561	3300032752	Seawater	KNCSSDQEKLLKFKPEGQEFSKILRSLEKIIQTVKG
Ga0307390_107629262	3300033572	Marine	VTSVKLLKFEAEGREFANFLRSLEQFIQTVKGQNNFW

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F057889

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences