Metagenome / Metatranscriptome Family F057703

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F057703
Family Type	Metagenome / Metatranscriptome
Number of Sequences	136
Average Sequence Length	63 residues
Representative Sequence	MTTTLDLPAPNAPSGYLLPDLADLVLEFGASYPLLGYLVAPDEEFDEPTALDPVIYAGLLHP
Number of Associated Samples	115
Number of Associated Scaffolds	136

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	21.32 %
% of genes near scaffold ends (potentially truncated)	41.18 %
% of genes from short scaffolds (< 2000 bps)	94.85 %
Associated GOLD sequencing projects	111
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (88.971 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (39.706 % of family members)
Environment Ontology (ENVO)	Unclassified (35.294 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.735 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.11% β-sheet: 0.00% Coil/Unstructured: 68.89%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 136 Family Scaffolds
PF02776	TPP_enzyme_N	44.85
PF03551	PadR	13.97
PF00211	Guanylate_cyc	4.41
PF07883	Cupin_2	3.68
PF00672	HAMP	2.94
PF10400	Vir_act_alpha_C	2.21
PF07366	SnoaL	2.21
PF00278	Orn_DAP_Arg_deC	2.21
PF02541	Ppx-GppA	1.47
PF01638	HxlR	0.74
PF02784	Orn_Arg_deC_N	0.74
PF02594	DUF167	0.74
PF07719	TPR_2	0.74
PF02470	MlaD	0.74

COG ID	Name	Functional Category	% Frequency in 136 Family Scaffolds
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	14.71
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	13.97
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	13.97
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	4.41
COG0019	Diaminopimelate decarboxylase	Amino acid transport and metabolism [E]	2.94
COG0248	Exopolyphosphatase/pppGpp-phosphohydrolase	Signal transduction mechanisms [T]	2.94
COG1166	Arginine decarboxylase (spermidine biosynthesis)	Amino acid transport and metabolism [E]	2.94
COG1872	Uncharacterized conserved protein YggU, UPF0235/DUF167 family	Function unknown [S]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.97 %
Unclassified	root	N/A	11.03 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.97 %
Unclassified	root	N/A	11.03 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.97 %
Unclassified	root	N/A	11.03 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	82.35 %
Unclassified	root	N/A	11.03 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	80.88 %
Unclassified	root	N/A	11.03 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.47 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	32.35 %
Unclassified	root	N/A	11.03 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6.62 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.47 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	31.62 %
Unclassified	root	N/A	11.03 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	6.62 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.47 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	16.91 %
Unclassified	root	N/A	11.03 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.62 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	2.21 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.47 %
Capillimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Capillimicrobiaceae	0.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	16.91 %
Unclassified	root	N/A	11.03 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.62 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	2.21 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.47 %
Capillimicrobium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Capillimicrobiaceae → Capillimicrobium	0.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	15.44 %
Unclassified	root	N/A	11.03 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.62 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	2.21 %
Solirubrobacter soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	1.47 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.47 %
Capillimicrobium parvum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Capillimicrobiaceae → Capillimicrobium → Capillimicrobium parvum	0.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Solirubrobacter sp. CPCC 204708	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. CPCC 204708	15.44 %
Unclassified	root	N/A	11.03 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.62 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	2.21 %
Solirubrobacter soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	1.47 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.47 %
Capillimicrobium parvum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Capillimicrobiaceae → Capillimicrobium → Capillimicrobium parvum	0.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000156\|NODE_c0315840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	605	Open in IMG/M
3300000891\|JGI10214J12806_12074805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1047	Open in IMG/M
3300000956\|JGI10216J12902_107978642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	605	Open in IMG/M
3300000956\|JGI10216J12902_115019036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	584	Open in IMG/M
3300001686\|C688J18823_10020282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4471	Open in IMG/M
3300002568\|C688J35102_120901570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	2149	Open in IMG/M
3300004081\|Ga0063454_100978657	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300004480\|Ga0062592_101555948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	637	Open in IMG/M
3300005168\|Ga0066809_10210239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	529	Open in IMG/M
3300005332\|Ga0066388_104125458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	741	Open in IMG/M
3300005338\|Ga0068868_100864731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	820	Open in IMG/M
3300005365\|Ga0070688_101375798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Capillimicrobiaceae → Capillimicrobium → Capillimicrobium parvum	571	Open in IMG/M
3300005451\|Ga0066681_10262776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1050	Open in IMG/M
3300005455\|Ga0070663_101361234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	628	Open in IMG/M
3300005546\|Ga0070696_100339371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1161	Open in IMG/M
3300005560\|Ga0066670_10727925	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300005614\|Ga0068856_100361331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1471	Open in IMG/M
3300005614\|Ga0068856_101422939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	708	Open in IMG/M
3300005937\|Ga0081455_10479401	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300005937\|Ga0081455_10663456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	670	Open in IMG/M
3300005983\|Ga0081540_1058368	Not Available	1859	Open in IMG/M
3300006046\|Ga0066652_100211950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1673	Open in IMG/M
3300006163\|Ga0070715_10589370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	650	Open in IMG/M
3300006175\|Ga0070712_101685298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	555	Open in IMG/M
3300006881\|Ga0068865_101023443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	724	Open in IMG/M
3300009840\|Ga0126313_11141454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. CPCC 204708	641	Open in IMG/M
3300009840\|Ga0126313_11542264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	552	Open in IMG/M
3300010041\|Ga0126312_11067557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	592	Open in IMG/M
3300010041\|Ga0126312_11198225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	560	Open in IMG/M
3300010042\|Ga0126314_10570759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	824	Open in IMG/M
3300010337\|Ga0134062_10563474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	582	Open in IMG/M
3300010373\|Ga0134128_10816754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1033	Open in IMG/M
3300010375\|Ga0105239_12091860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	658	Open in IMG/M
3300010397\|Ga0134124_11348380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	738	Open in IMG/M
3300012200\|Ga0137382_10586437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	796	Open in IMG/M
3300012203\|Ga0137399_11371508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	593	Open in IMG/M
3300012204\|Ga0137374_10754210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	726	Open in IMG/M
3300012208\|Ga0137376_10732148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	853	Open in IMG/M
3300012210\|Ga0137378_11661752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	546	Open in IMG/M
3300012355\|Ga0137369_10069514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2987	Open in IMG/M
3300012505\|Ga0157339_1027057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	649	Open in IMG/M
3300012508\|Ga0157315_1077686	Not Available	500	Open in IMG/M
3300012530\|Ga0136635_10221412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	652	Open in IMG/M
3300012680\|Ga0136612_10015974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	3732	Open in IMG/M
3300012908\|Ga0157286_10275365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. CPCC 204708	605	Open in IMG/M
3300012915\|Ga0157302_10044180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	1234	Open in IMG/M
3300012960\|Ga0164301_10675103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	774	Open in IMG/M
3300012960\|Ga0164301_10928440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	678	Open in IMG/M
3300012985\|Ga0164308_10444671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1071	Open in IMG/M
3300012986\|Ga0164304_10897163	Not Available	693	Open in IMG/M
3300012987\|Ga0164307_10406300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1005	Open in IMG/M
3300012987\|Ga0164307_10740631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. CPCC 204708	775	Open in IMG/M
3300012988\|Ga0164306_11589901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	563	Open in IMG/M
3300013306\|Ga0163162_11659532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	729	Open in IMG/M
3300013307\|Ga0157372_11088133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	925	Open in IMG/M
3300013308\|Ga0157375_12489095	Not Available	618	Open in IMG/M
3300014487\|Ga0182000_10040174	All Organisms → cellular organisms → Bacteria	1354	Open in IMG/M
3300014745\|Ga0157377_11184736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	590	Open in IMG/M
3300015200\|Ga0173480_10730494	Not Available	624	Open in IMG/M
3300015371\|Ga0132258_11346290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1804	Open in IMG/M
3300015371\|Ga0132258_12407967	Not Available	1319	Open in IMG/M
3300015372\|Ga0132256_103377198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	537	Open in IMG/M
3300015373\|Ga0132257_100860294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1134	Open in IMG/M
3300015374\|Ga0132255_101800393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	930	Open in IMG/M
3300017695\|Ga0180121_10031234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1878	Open in IMG/M
3300017965\|Ga0190266_10286769	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	849	Open in IMG/M
3300017965\|Ga0190266_10556793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	683	Open in IMG/M
3300018027\|Ga0184605_10188292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	935	Open in IMG/M
3300018051\|Ga0184620_10021771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1601	Open in IMG/M
3300018073\|Ga0184624_10129412	All Organisms → cellular organisms → Bacteria	1099	Open in IMG/M
3300018465\|Ga0190269_11117129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	610	Open in IMG/M
3300018482\|Ga0066669_11290795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	660	Open in IMG/M
3300019767\|Ga0190267_10558195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	696	Open in IMG/M
3300019867\|Ga0193704_1096685	Not Available	521	Open in IMG/M
3300019869\|Ga0193705_1059977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. CPCC 204708	770	Open in IMG/M
3300019873\|Ga0193700_1068748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. CPCC 204708	528	Open in IMG/M
3300021315\|Ga0179958_1169734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	752	Open in IMG/M
3300022694\|Ga0222623_10188336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. CPCC 204708	801	Open in IMG/M
3300025916\|Ga0207663_11610154	Not Available	523	Open in IMG/M
3300025931\|Ga0207644_10568100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	940	Open in IMG/M
3300025932\|Ga0207690_11463998	Not Available	571	Open in IMG/M
3300025933\|Ga0207706_10290341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1426	Open in IMG/M
3300025935\|Ga0207709_10164753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1550	Open in IMG/M
3300025945\|Ga0207679_12134613	Not Available	509	Open in IMG/M
3300025981\|Ga0207640_10610551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. CPCC 204708	924	Open in IMG/M
3300026078\|Ga0207702_10811291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	925	Open in IMG/M
3300026078\|Ga0207702_10956115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	849	Open in IMG/M
3300028587\|Ga0247828_10892267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	572	Open in IMG/M
3300028589\|Ga0247818_10625596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	742	Open in IMG/M
3300028705\|Ga0307276_10036453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1043	Open in IMG/M
3300028705\|Ga0307276_10057108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	877	Open in IMG/M
3300028709\|Ga0307279_10036843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. CPCC 204708	752	Open in IMG/M
3300028710\|Ga0307322_10058832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	948	Open in IMG/M
3300028715\|Ga0307313_10272205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. CPCC 204708	527	Open in IMG/M
3300028718\|Ga0307307_10304224	Not Available	514	Open in IMG/M
3300028719\|Ga0307301_10182697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. CPCC 204708	679	Open in IMG/M
3300028719\|Ga0307301_10279592	Not Available	546	Open in IMG/M
3300028721\|Ga0307315_10088314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. CPCC 204708	901	Open in IMG/M
3300028722\|Ga0307319_10237664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	599	Open in IMG/M
3300028768\|Ga0307280_10325805	Not Available	564	Open in IMG/M
3300028771\|Ga0307320_10210754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	761	Open in IMG/M
3300028782\|Ga0307306_10037582	All Organisms → cellular organisms → Bacteria	1170	Open in IMG/M
3300028787\|Ga0307323_10220969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. CPCC 204708	683	Open in IMG/M
3300028791\|Ga0307290_10150531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	852	Open in IMG/M
3300028791\|Ga0307290_10267352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. CPCC 204708	626	Open in IMG/M
3300028791\|Ga0307290_10314897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	573	Open in IMG/M
3300028807\|Ga0307305_10231157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	847	Open in IMG/M
3300028807\|Ga0307305_10248911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	812	Open in IMG/M
3300028810\|Ga0307294_10136773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. CPCC 204708	806	Open in IMG/M
3300028811\|Ga0307292_10284657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. CPCC 204708	691	Open in IMG/M
3300028814\|Ga0307302_10105302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	1349	Open in IMG/M
3300028814\|Ga0307302_10204258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	964	Open in IMG/M
3300028819\|Ga0307296_10644199	Not Available	580	Open in IMG/M
3300028824\|Ga0307310_10242234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. CPCC 204708	863	Open in IMG/M
3300028828\|Ga0307312_10427584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	871	Open in IMG/M
3300028828\|Ga0307312_10463665	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. CPCC 204708	835	Open in IMG/M
3300028828\|Ga0307312_11074324	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. CPCC 204708	532	Open in IMG/M
3300028881\|Ga0307277_10020433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2593	Open in IMG/M
3300028881\|Ga0307277_10192564	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. CPCC 204708	892	Open in IMG/M
3300028881\|Ga0307277_10264594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	760	Open in IMG/M
3300028885\|Ga0307304_10213804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. CPCC 204708	829	Open in IMG/M
3300028885\|Ga0307304_10488341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. CPCC 204708	563	Open in IMG/M
3300030510\|Ga0268243_1125679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	610	Open in IMG/M
3300030785\|Ga0102757_11483788	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300031152\|Ga0307501_10264683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	517	Open in IMG/M
3300031164\|Ga0307502_10000082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	24719	Open in IMG/M
3300031199\|Ga0307495_10156566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	594	Open in IMG/M
3300031366\|Ga0307506_10509032	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300031847\|Ga0310907_10473036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	666	Open in IMG/M
3300031901\|Ga0307406_10120899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1821	Open in IMG/M
3300031938\|Ga0308175_102807122	Not Available	544	Open in IMG/M
3300032074\|Ga0308173_11209937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	706	Open in IMG/M
3300032075\|Ga0310890_11147944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	631	Open in IMG/M
3300032159\|Ga0268251_10060870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1263	Open in IMG/M
3300033551\|Ga0247830_10742862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	780	Open in IMG/M
3300034384\|Ga0372946_0006192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	5196	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	77.21%
Host-Associated	Host-Associated	22.06%
Engineered	Engineered	0.74%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.06%
Plants	Host-Associated → Plants	22.06%
Aquatic	Environmental → Aquatic	5.15%
Solid Waste	Engineered → Solid Waste	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.06%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.82%
Sediment	Environmental → Aquatic → Sediment	2.94%
Freshwater	Environmental → Aquatic → Freshwater	2.21%
Phylloplane	Host-Associated → Plants → Phylloplane	0.74%
Grass	Engineered → Solid Waste → Grass	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.44%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.56%
Loam	Environmental → Terrestrial → Soil → Loam	6.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.41%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.94%
Ice	Environmental → Aquatic → Freshwater → Ice	2.21%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.74%
Composting	Engineered → Solid Waste → Grass → Composting	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	52.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.56%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.15%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.41%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.68%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.94%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	2.21%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.21%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.47%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.74%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.74%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	39.71%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.41%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	3.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.94%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	2.21%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.21%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.21%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.21%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.47%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.47%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.47%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.47%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.74%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.74%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.74%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.74%
Sugar Cane Bagasse Incubating Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000156	Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic	Engineered	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012505	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.10.yng.090610	Host-Associated	Open in IMG/M
3300012508	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.2.old.270510	Host-Associated	Open in IMG/M
3300012530	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ85 (21.06)	Environmental	Open in IMG/M
3300012680	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ224A (23.06)	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017695	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ540 (21.06) (version 2)	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300019873	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1	Environmental	Open in IMG/M
3300021315	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_2_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028709	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_118	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030510	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG (v2)	Environmental	Open in IMG/M
3300030785	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 5C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031164	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 16_S	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034384	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_KNG_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
NODE_03158402	3300000156	Sugar Cane Bagasse Incubating Bioreactor	MPLMTATLDPPAPNAPSGYLLPDLADLVEELGGSYPLLAYLLSPDEEFDEQTALDPVIFAGLLHP*
JGI10214J12806_120748052	3300000891	Soil	MGAMTATLDRPAPNAPSGYLLPDLADLVEEIGASFPLLGYLVVPDEEFDEPAALDPVIFAGLLHP*
JGI10216J12902_1079786422	3300000956	Soil	MSTTVELPAPNAPSGYLLPDLADLVLELGASYPLLAYALQPDEEFDERTALDPIILAGLVHP*
JGI10216J12902_1150190362	3300000956	Soil	MTTTLDLPAPNAPSGYLLPDLADLVLELGASYPLLGYIVAPDEEFDERTALDPVIFAGLLSP*
C688J18823_100202823	3300001686	Soil	MTTTLDLPAPNAPSGYLLPDLADLVLEFGASYPLLGYLISPDEEFDEPTALDPVIYAGLLHP*
C688J35102_1209015702	3300002568	Soil	MAVATDLPAPNAPGGYLLADLDDLARELGASYPLLGYLLAPDERFEEPAALDPVILAGLVSP*
Ga0063454_1009786572	3300004081	Soil	MSTTVELPAPNAPSGYLLPDLADLVLELGASYPLLAYALHPDEDFDERTALDPIILAGLVHP*
Ga0062592_1015559481	3300004480	Soil	MTTTLDLPAPNAPSGYLLPDLADLVVEFGASYPLLGYLVSADEEFDEPTALDPVIYAGLLHP*
Ga0066809_102102391	3300005168	Soil	MAATVDLPAPNAPSGYLLGDLADLALELGGSYPLLGYIVAPDEQFDERTALDPVILAGL
Ga0066388_1041254582	3300005332	Tropical Forest Soil	MPVMTATLDPPAPNAPSGYLLPDLADLVEELGGSYPLLAYLLSPDEEFDEQTALDPVIFAGLLHP*
Ga0068868_1008647312	3300005338	Miscanthus Rhizosphere	MTTAVDLPAPNAPSGYLLPDLADLALEFGASYPLLGYLVAPDEAFDEPTALDPVIFAGLLHP*
Ga0070688_1013757982	3300005365	Switchgrass Rhizosphere	MTTTLDLPAPNAPSGYLLPDLADLVVEFGASYPLLGYLVSPDEEFDEPTALDPVIYAGLLHP*
Ga0066681_102627761	3300005451	Soil	MSMDTTTLGPPAPNAPSGYLLPDLDALVHELGASYPMLAYLVHEDEAYEEDRALDPVIFAGLLHP*
Ga0070663_1013612342	3300005455	Corn Rhizosphere	MTTTLDLPAPNAPSGYLLPDLADLVVEFGASYPLLGYLVSPDEEFAEPTALDPVIYAGLLHP*
Ga0070696_1003393712	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MTTALDLPAPNAPSGYLLPDLADLVVEFGASYPLLGYLVSADEEFDEPTALDPVIYAGLLHP*
Ga0066670_107279251	3300005560	Soil	EDVHADGEDDSRRRHLPAPNAPSGYVLPDLEALVAEIGASYPLLAYVVQTDEEFDEASALDPVILAGLVSP*
Ga0068856_1003613312	3300005614	Corn Rhizosphere	MTTAVDLPAPNAPSGYLLPDLADLALEFGASYPLLGYLVAPDEEFDERTALDPVIFAGLLHP*
Ga0068856_1014229392	3300005614	Corn Rhizosphere	MTTMVDLPAPNAPSGYLLPDLADLALEFGASYPLLGYLVAPDEAFDEPTALDPVIFAGLLHP*
Ga0081455_104794012	3300005937	Tabebuia Heterophylla Rhizosphere	MTATLDSPAPNAPSGYLLPDLADLVTELGASYPLLGYLVQTDEEFEERTALDPVIFAGLLHP*
Ga0081455_106634562	3300005937	Tabebuia Heterophylla Rhizosphere	MTTTLDLPAPNAPSGYLLPDLADLVVEFGASYPMLGYLIAPDEEFDEPTALDPVIYAGLLHP*
Ga0081540_10583681	3300005983	Tabebuia Heterophylla Rhizosphere	MTTTLDLPAPNAPSGYLLPDLADLVVEFGASYPMLGYLIAPDEEFDEPTALDPVIYAGL
Ga0066652_1002119502	3300006046	Soil	NAPSGYLLPDLDALVHELGASYPMLAYLVHEDEAYEEDRALDPVIFAGLLHP*
Ga0070715_105893702	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MTTTLDLPAPNAPSGYLLPDLADLVVEFGASYPLLGYLVAPDEEFDEPTALDPVIYAGLLHP*
Ga0070712_1016852982	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	AMTTTLDLPAPNAPSGYLLPDLADLVVEFGASYPLLGYPVAPDEEFDEPTALDPVIYAGLLHP*
Ga0068865_1010234431	3300006881	Miscanthus Rhizosphere	PRIMADPLDLPAPNAPGGHLLADLDDLARELGASYPLLAYLLQPEEAFEEPAALDPVILAGLVSP*
Ga0126313_111414542	3300009840	Serpentine Soil	MTTTLDLPAPNAPSGYLLPDLADLVLELGASYPLLGYLVAPDEEFDEPTALDPVIFAGLLSP*
Ga0126313_115422641	3300009840	Serpentine Soil	MSTTAELPAPNAPSGYLLPDLADLVLEVGASYPLLAYALQADEEFDERTALDPII
Ga0126312_110675571	3300010041	Serpentine Soil	MAAMNGEPLALAPPAPNAPSGYVLPDLDALIAEVGASYPLLGYVVQPDEPYDEETALDPVIFAGLLRP*
Ga0126312_111982252	3300010041	Serpentine Soil	MSTTAQLPAPNAPSGYLLPDLADLVLELGGSYPLLAYALQPDEELDERTALDPIILAGLVHP*
Ga0126314_105707592	3300010042	Serpentine Soil	MSTTAELPAPNAPSGYLLPDLADLVHELGASYPLLAYALQPEEEFDERTALDPIILAGLVHP*
Ga0134062_105634741	3300010337	Grasslands Soil	TTLGPPAPNAPSGYLLPDLDALVHELGASYPMLAYLVHEDEAYEEDRALDPVIFAGLLHP
Ga0134128_108167542	3300010373	Terrestrial Soil	MTTTLDLPAPNAPSGYLLPDLANLVVEFGASYPLLGYLVSPDEEFAEPTALDPVIYAGLLHP*
Ga0105239_120918601	3300010375	Corn Rhizosphere	MTTAVDLPAPNAPGGYLLPDLADLALEFGASYPLLGYLVAPDEEFDERTALDPVIFAGLLHP*
Ga0134124_113483802	3300010397	Terrestrial Soil	MADPLDLPAPNAPGGHLLADLDDLARELGASYPLLAYLLQPEEAFEEPAALDPVILAGLVSP*
Ga0137382_105864372	3300012200	Vadose Zone Soil	MTTTLDLPAPNAPSGYLLPDLADLVLEFGASYPLLGYLVSPDEEFDEPTALDPVIYAGLLHP*
Ga0137399_113715081	3300012203	Vadose Zone Soil	ATMAAMTLPATPMGPPAPNAPGGYALPDLADLVAELGASYPMLAYTLLDDEAFDEESALDPVILAGLLHP*
Ga0137374_107542101	3300012204	Vadose Zone Soil	MRTTAELPAPNAASGYLLADLADLALELGGSYPLLAYALRPEEELDARSALDPIILAGLLHP*
Ga0137376_107321482	3300012208	Vadose Zone Soil	MTTTLDLPAPNAPSGYLLPDLADLALEFGASYPLLGYLVAPDEEFDEPTALDPVIYAGLLHP*
Ga0137378_116617522	3300012210	Vadose Zone Soil	MTTTLDLPAPNARSGYLLPDLADLVLEFGASYPLLGYLVSPDEEFDEPTALDPVIYAGLLHP*
Ga0137369_100695142	3300012355	Vadose Zone Soil	MTPTLDPPAPNAPSGYLLPDLADLVLELGASYPLLGYLVAPDEEFDEPTALDPVIFAGLLSP*
Ga0157339_10270571	3300012505	Arabidopsis Rhizosphere	MTTTLDLPAPNAPSGYLLPDLADLVLEFGGSYPLLGYLVAPDEEFDETAALDPVIYAGLL
Ga0157315_10776862	3300012508	Arabidopsis Rhizosphere	MTTTLDLPAPNAPSGYLLPDLVDLVEEFGASYPLLGYLVADDEAFEEPTALDPVIYAGLLSP*
Ga0136635_102214121	3300012530	Polar Desert Sand	IDRPPGFSAPAPNAPSGYLLPDLDALVAELGASYPLLGYAVQTDEVYDEATALDPVIFAGLVNP*
Ga0136612_100159742	3300012680	Polar Desert Sand	MAIDRPPGFSAPAPNAPSGYLLPDLDALVAELGASYPLLGYAVQTDEVYDEATALDPVIFAGLVNP*
Ga0157286_102753651	3300012908	Soil	PNAPSGYLLPDLADLVVEFGASYPLLGYLVSADEEFDEPTALDPVIYAGLLHP*
Ga0157302_100441801	3300012915	Soil	MTTTFDLPAPNAPSGYLLPDLADLVLEFGASYPLLGYFVSPDEAFDEPTALDPVIYAGLLHP*
Ga0164301_106751032	3300012960	Soil	LADPLDLPAPNAPGGHLLADLDDLARELGGSYPLLAYLLQHEEAFEEPAALDPVILAGLVSP*
Ga0164301_109284401	3300012960	Soil	MTTTGDLPAPNAPSGYLLPDLADLVLEFGGSYPLLGYLVAPDEEFDDTTALDPVIYA
Ga0164308_104446712	3300012985	Soil	MTTTLDLPAPNAPSGYLLPDLADLVVEFGGSYPLLGYLVAPDEDVDEPTALDPVIYAGLLHP*
Ga0164304_108971633	3300012986	Soil	AHHEVMTTTLDLPAPNAPSGYLLPDLADLVVEFGGSYPLLGYLVAPDEDFDEPTALDPVIYAGLLHP*
Ga0164307_104063002	3300012987	Soil	MTTTVDLPAPNAPSGYLLPDLADLVVEFGGSYPLLGYLVAPDEDFDEPTALDPVIYAGLLHP*
Ga0164307_107406311	3300012987	Soil	DLPAPNAPSGYLLPDLADLVLEFGGSYPLLGYLVAPDEEFDDTTALDPVIYAGLLHP*
Ga0164306_115899012	3300012988	Soil	MADPLDLPAPNAPGGHLLADLDDLARELGASYPLLAYLLQPEEAFEEPAALDPVIL
Ga0163162_116595322	3300013306	Switchgrass Rhizosphere	MTTTVDLPAPNAPSGYLLADLADLALEFGASYPLLGYLVAPDEAFDEPTALDPVIFAGLLHP*
Ga0157372_110881332	3300013307	Corn Rhizosphere	MTTTLDLPAPNAPSGYLLPDLADLVVEFGASYPLLGYLVSPDEEYDEPTALDPVIYAGLLHP*
Ga0157375_124890951	3300013308	Miscanthus Rhizosphere	PLVGPARRAHHEVMTTAVDLPAPNAPSGYLLPDLADLALEFGASYPLLGYLLAPDEEFDERTALDPVIFAGLLHP*
Ga0182000_100401743	3300014487	Soil	MSTTAQLPAPNAPSGYLLPDLADLVAELGGSYPLLAYALQPEEEFDERTALDAIILAGLVHP*
Ga0157377_111847362	3300014745	Miscanthus Rhizosphere	MTTAVDLPAPNAPGGYLLPDLADLALEFGASYPLLGYLVAPDEEFDERTALDPVIFAGLL
Ga0173480_107304942	3300015200	Soil	MTTTLDLPAPNAPSGYLLPDLADLVLEFGASYPLLGYLVSPDEAFEEPTALDPVIYAGLLHP*
Ga0132258_113462902	3300015371	Arabidopsis Rhizosphere	MTTTLDLPAPNAPSGYLLPDLADLVLEFGASYPLLGYLVTPDEEFEEPTALDPVIYAGLLHP*
Ga0132258_124079671	3300015371	Arabidopsis Rhizosphere	PLALAPPGPKAPGGYLLADLDARLAEVGASYPLLGYVLQPDEPYDEATALDPVIFAGLLRP*
Ga0132256_1033771982	3300015372	Arabidopsis Rhizosphere	MTTMIDLPAPNAPSGYLLPDLSDLVLEFGASYPLLGYLVTPDEEFEEPTALD
Ga0132257_1008602942	3300015373	Arabidopsis Rhizosphere	MTTTLDLPAPNAPSGYLLPDLADLVLEFGASYPLLGYLVSPDEAFEEPTALDPLIYAGLLHP*
Ga0132255_1018003931	3300015374	Arabidopsis Rhizosphere	MTTTLDLPAPNAPSGYLLPDLADLVLEFGASYPLLGYLVATDEEFADATALDPVIYAGLLHP*
Ga0180121_100312342	3300017695	Polar Desert Sand	MAIDRPPGFSAPAPNAPSGYLLPDLDALVAELGASYPLLGYAVQTDEVYDEATALDPVIFAGLVNP
Ga0190266_102867692	3300017965	Soil	MTTTLDLPAPNAPSGYLLPDLADLVLEFGASYPLLGYLVCPDEEFDEPTALDPVIYAGLLHP
Ga0190266_105567932	3300017965	Soil	MRLMSTTVELPAPNAPSGYLLPDLADLVLELGASYPLLAYALQPDEEFDERTALDPIILAGLVHP
Ga0184605_101882922	3300018027	Groundwater Sediment	LPVARGPRHHEAMSTTAELPAPNAPSGYLLPDLADLVLELGASYPLLAYALQPDEEFDERTALDPIILAGLVHP
Ga0184620_100217712	3300018051	Groundwater Sediment	MTTTLDLPAPNAPSGYLLPDLADLVLEFGASYPLLGYLVAPDEEFDEPTALDPVIYAGLLHP
Ga0184624_101294123	3300018073	Groundwater Sediment	MTTTLDLPAPNAPSGYLLPDLADLVVEFGASYPLLGYLVAPDEEFDEPTALDPVIYAGLLSP
Ga0190269_111171292	3300018465	Soil	MTTTLDLPAPNAPSGYLLPDLADLVLEFGASYPLLGYIVAPDEEFDEPTALDPVIFAGLLSP
Ga0066669_112907952	3300018482	Grasslands Soil	MSTDTTTLGPPAPNAPSGYLLPDLDALVHELGASYPMLAYLVHEDEAYEEDRALDPVIFAGLLHP
Ga0190267_105581952	3300019767	Soil	MTTTLDLPAPNAPSGYLLPDLADLVFEFGASYPLLGYLVAPDEEFDEPTALDPVIYAGLLHP
Ga0193704_10966852	3300019867	Soil	MATTLDLPAPNAPSGYLLPDLADLVLEFGASYPLLGYLVAPDEEFDEPTALDPVIYAGLLHP
Ga0193705_10599772	3300019869	Soil	PAPNAPSGYLLPDLADLVLEFGASYPLLGYLVAPDEEFDEPTALDPVIYAGLLHP
Ga0193700_10687481	3300019873	Soil	VELPAPNAPSGYLLPDLADLVLELGASYPLLAYALQPDEEFDERTALDPIILAGLVHP
Ga0179958_11697341	3300021315	Vadose Zone Soil	ATPMGPPAPNAPGGYALPDLADLVAELGASYPMLAYTLLDDEAFDEESALDPVILAGLLH
Ga0222623_101883361	3300022694	Groundwater Sediment	AHHEAMSTTAELPAPNAPSGYLLPDLADLVLELGASYPLLAYALQPDEEFDERTALDPIILAGLVHP
Ga0207663_116101542	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	LVTPRGPAHHGAMTTTLDLPAPNAPSGYLLPDLADLVVEFGASYPLLGYLVAPDEEFDEPTALDPVIYAGLLHP
Ga0207644_105681001	3300025931	Switchgrass Rhizosphere	MADPLDLPAPNAPGGHLLADLDDLARELGASYPLLAYLLQPEEAFEEPAALEPVILAGLVSP
Ga0207690_114639982	3300025932	Corn Rhizosphere	ALRPHHAVMTTTVDLPAPNAPSGYLLPDLADLAIEFGASYPLLGYLVAPDEEFDERTALDPVIFAGLLHP
Ga0207706_102903412	3300025933	Corn Rhizosphere	MTTTLDLPAPNAPSGYLLPDLADLVVEFGASYPLLGYLVSADEEFDEPTALDPVIYAGLLHP
Ga0207709_101647532	3300025935	Miscanthus Rhizosphere	MADPLDLPAPNAPGGHLLADLDDLARELGASYPLLAYLLQPEEAFEEPAALDPVILAGLVSP
Ga0207679_121346132	3300025945	Corn Rhizosphere	AHHEVMTTAVDLPAPNAPGGYLLPDLADLALEFGASYPLLGYLVAPDEEFDERTALDPVIFAGLLHP
Ga0207640_106105511	3300025981	Corn Rhizosphere	RDPAHHGVMTTTLDLPAPNAPSGYLLPDLADLVVEFGASYPLLGYLVSADEEFDEPTALDPVIYAGLLHP
Ga0207702_108112912	3300026078	Corn Rhizosphere	MTTAVDLPAPNAPSGYLLPDLADLALEFGASYPLLGYLVAPDEEFDERTALDPVIFAGLLHP
Ga0207702_109561152	3300026078	Corn Rhizosphere	MTTTLDLPAPNAPSGYLLPDLADLVVEFGASYPLLGYLVSPDEEFDEPTALDPVIYAGLLHP
Ga0247828_108922671	3300028587	Soil	HGVMTTTLDLPAPNAPSGYLLPDLADLVVEFGASYPLLGYLVSADEEFDEPTALDPVIYAGLLHP
Ga0247818_106255962	3300028589	Soil	MTTTLDLPAPNAPSGYLLPDLVDLVEEFGASYPLLGYLVADDEEFAEPTALDPVIYAGLLSP
Ga0307276_100364532	3300028705	Soil	MTTTLDLPAPNAPSGYLLPDLADLVLEFGASYPLLGYLVSPDEEFDEPTALDPVIYAGLLHP
Ga0307276_100571082	3300028705	Soil	MTTTLDRPAPNAPSGYLLPDLADLVLEFGASYPLLGYLVAPDEEFDEPTALDPVIYAGLLHP
Ga0307279_100368431	3300028709	Soil	ARGPAHHGVMTTTLDLPAPNAPSGYLLPDLADLVLEFGASYPLLGYLVAPDEEFDEPTALDPVIYAGLLHP
Ga0307322_100588322	3300028710	Soil	MTTLDPPAPNAPSGYLLPDLADMVLEFGASYPLLGYFVHTDEEFDEPTALDPVIFAGLLH
Ga0307313_102722052	3300028715	Soil	STTVELPAPNAPSGYLLPDLADLVLELGASYPLLAYALQPDEEFDERTALDPIILAGLVH
Ga0307307_103042242	3300028718	Soil	PNAPSGYLLPDLADLVLELGASYPLLAYAVAPDEEFDERTALDPVIFAGLLHP
Ga0307301_101826971	3300028719	Soil	APNAPSGYLLPDLADLVLEVGASYPLLAYAIQPDEEFDEHTALDPVIFAGLLHP
Ga0307301_102795922	3300028719	Soil	SKPLVRARRPAHHGVMTTTLDLPAPNAPSGYLLPDLADLVLEFGASYPLLGYLVAPDEEFDEPTALDPVIYAGLLHP
Ga0307315_100883143	3300028721	Soil	RRPAHHGVMATTLDLPAPNAPSGYLLPDLADLVLEFGASYPLLGYLVAPDEEFDEPTALDPVIYAGLLHP
Ga0307319_102376641	3300028722	Soil	MPTTLDLPAPNAPSGYLLPDLADLALEFGASYPLLGYLVAPDEEFDERTALDPVIFAGLLHP
Ga0307280_103258052	3300028768	Soil	VGAAGPAHHGVMTTTLDPPAPNAPSGYLLPDLADLVLEFGASYPLLGYIVAPDEEFDEPTALDPVIFAGLLHP
Ga0307320_102107542	3300028771	Soil	MTTPLDLPAPNAPSGYLLPDLADLVLEVGASYPLLAYAIQPDEEFDEDTALDPVIFAGLLHP
Ga0307306_100375823	3300028782	Soil	MTTTLDLPAPNAPSGYLLPDLADLVLELGASYPLLGYLVSPDEEFDEPTALDPVIYAGLLHP
Ga0307323_102209692	3300028787	Soil	APNAPSGYLLPDLADLVLEFGASYPLLGYLVAPDEEFDEPTALDPVIYAGLLHP
Ga0307290_101505312	3300028791	Soil	MTTTLDLPAPNAPSGYLLPDLADLVVELGASYPLLGYLVSPDEEFDEPTALDPVIYAGLL
Ga0307290_102673521	3300028791	Soil	VRARGPAHHGVMTTTLDLPAPNAPSGYLLPDLADLVLEFGASYPLLGYLVAPDEEFDEPTALDPVIYAGLLHP
Ga0307290_103148971	3300028791	Soil	MPTTLDPPAPNAPSGYLLPDLADLALEFGASYPLLGYLVAPDEEFDEPTALDPVIFAGLLHP
Ga0307305_102311572	3300028807	Soil	MTTTLDLPAPNAPSGYLLPDLADLVLEFGASYPLLGYLVAPDEEFDEPTALDPVIFAGLLHP
Ga0307305_102489112	3300028807	Soil	MSTTAELPAPNAPSGYLLPDLADLVLELGASYPLLAYALQPDEEFDERTALDPIILAGLVHP
Ga0307294_101367731	3300028810	Soil	LPAPNAPSGYLLPDLADLVLEFGASYPLLGYLVAPDEEFDEPTALDPVIYAGLLHP
Ga0307292_102846571	3300028811	Soil	APSGYLLPDLADLVLELGASYPLLAYALQPDEEFDERTALDPIILAGLVHP
Ga0307302_101053023	3300028814	Soil	AHHEIMPTTLDPPAPNAPSGYLLPDLADLALEFGASYPLLGYLVAPDEEFDEPTALDPVIFAGLLHP
Ga0307302_102042581	3300028814	Soil	AHHGVMATTLDLPAPNAPSGYLLPDLADLVLEFGASYPLLGYLVAPDEEFDEPTALDPVIYAGLLHP
Ga0307296_106441991	3300028819	Soil	HEVMTTTLDLPAPNAPSGYLLPDLADLVLEFGASYPLLGYMVAPDEEFDEPTALDPVIFAGLLHP
Ga0307310_102422343	3300028824	Soil	TTTLDLPAPNAPSGYLLPDLADLVLEFGASYPLLGYLVAPDEEFDEPTALDPVIYAGLLH
Ga0307312_104275842	3300028828	Soil	VAGPGAPHHEAMTTTLDPPAPNAPSGYLLPDLADLVLELGASYPLLAYAVAPDEEFDERTALDPVIFAGLLHP
Ga0307312_104636652	3300028828	Soil	MTTTLDTPAPNAPSGYLLPDLADLVLEFGASYPLLGYIVATDEEFDEPTALDPVIFAGLLHP
Ga0307312_110743241	3300028828	Soil	RPAHHGVMTTTLDLPAPNAPSGYLLPDLADLVLEFGASYPLLGYLVAPDEEFDEPTALDPVIYAGLLHP
Ga0307277_100204331	3300028881	Soil	AHYGVMTTTLDLPAPNAPSGYLLPDLADLVLEFGASYPLLGYLVAPDEEFDEPTALDPVIYAGLLHP
Ga0307277_101925641	3300028881	Soil	RPAHHGSMTTTLDLPAPNAPSGYLLPDLADLVVELGASYPLLGYLVSPDEEFDEPTALDPVIYAGLLHP
Ga0307277_102645942	3300028881	Soil	VRPHHDPMTALDPPAPNAPSGYLLPDLADLVVEVGASYPLLAYAIQPDEEFDERTALDPVIFAGLLHP
Ga0307304_102138041	3300028885	Soil	MTTTLDLPAPNAPSGYLLPDLADLVLELGASYPLLGYIVAPDEEFDERTALDPVIFAGLLHP
Ga0307304_104883412	3300028885	Soil	VRARRPAHHGVMATTLDLPAPNAPSGYLLPDLADLVLEFGASYPLLGYLVAPDEEFDEPTALDPVIYAGLLHP
Ga0268243_11256791	3300030510	Soil	MSTTAQLPAPNAPSGYLLPDLADLVAELGGSYPLLAYALQPEEEFDERTALDPIIL
Ga0102757_114837882	3300030785	Soil	PAPNAPGGYALPDLADLVAELGASYPMLAYTLLDDEAFDEESALDPVILAGLLHP
Ga0307501_102646832	3300031152	Soil	MTTTLDLPAPNAPSGYLLPDLADLVLEVGASYPLLAYAIQPDEEFDEHTALDPVIFAGLLHP
Ga0307502_1000008221	3300031164	Soil	MTTTVDLPAPNAPSGYLLPDLADLVLELGASYPLLGYIVASDEVFDERTALDPVIFAGLLHP
Ga0307495_101565662	3300031199	Soil	MTTTLDLPAPNAPSGYLLPDLVDLVEEFGASYPLLGYLVADDEAFDEPTALDPVIYAGLLSP
Ga0307506_105090321	3300031366	Soil	HHEAMTTTLDLPAPNAPSGYLLPDLADLVLEFGASYPLLGYLVTPDEEFEEPTALDPVIYAGLLHP
Ga0310907_104730362	3300031847	Soil	MTTTIDLPAPNAPSGYLLPDLADLVLEFGASYPLLGYLVAPDEEFDEPTALDPVIYAGLLHP
Ga0307406_101208992	3300031901	Rhizosphere	MSTTAELPAPNAPSGYLLPDLADLVLEVGASYPLLAYALQADEEFDERTALDPIILAGLVHP
Ga0308175_1028071222	3300031938	Soil	SKPLVRPRRPAHHEAMTTTLDLPAPNAPSGYLLPDLADLVLELGASYPLLGYLVSPDEEFDEPTALDPVIYAGLLHP
Ga0308173_112099371	3300032074	Soil	MTTTLELPAPNAPSGYLLPDLAELVLELGASYPLLGYLVSPDEEFEEPTALD
Ga0310890_111479442	3300032075	Soil	MPTTLDLPAPNAPSGYLLPDLADLVVEFGASYPLLGYLVAPDEEFDEPTALDPVIYAGLLHP
Ga0268251_100608702	3300032159	Agave	MSTAAQLPAPNAPSGYLLPDLADLVAELGGSNPLLAYALQPEEEFDERTALDPIILAGLVHP
Ga0247830_107428622	3300033551	Soil	MTTTLDLPAPNAPSGYLLPDLADLVVEFGASYPLLGYLVSVDEEFDEPTALDPVIYAGLLHP
Ga0372946_0006192_3834_4022	3300034384	Soil	MTTTLDHPAPNAPGGYLLPDLADLVLEVGASYPLLGYIVQPDEEFDEQTALDPVICAGLLHP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F057703

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences