Metagenome / Metatranscriptome Family F057657

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F057657
Family Type	Metagenome / Metatranscriptome
Number of Sequences	136
Average Sequence Length	89 residues
Representative Sequence	DPSTGQQVSYNAGRGDPTYLMDLRTTKFFDLGGGGNRKVGVFVEAFNLFNTANFGGSYSGNARSTNFRQPTDFVPGIGYARQVQLGARFLF
Number of Associated Samples	112
Number of Associated Scaffolds	136

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.94 %
% of genes near scaffold ends (potentially truncated)	92.65 %
% of genes from short scaffolds (< 2000 bps)	94.85 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (13.235 % of family members)
Environment Ontology (ENVO)	Unclassified (35.294 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (60.294 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 31.93% Coil/Unstructured: 68.07%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 136 Family Scaffolds
PF00005	ABC_tran	10.29
PF13620	CarboxypepD_reg	3.68
PF00753	Lactamase_B	3.68
PF04140	ICMT	2.94
PF00593	TonB_dep_Rec	2.21
PF12706	Lactamase_B_2	2.21
PF00437	T2SSE	2.21
PF04191	PEMT	1.47
PF01554	MatE	0.74
PF01596	Methyltransf_3	0.74
PF12836	HHH_3	0.74
PF03928	HbpS-like	0.74
PF11154	DUF2934	0.74
PF06736	TMEM175	0.74
PF13442	Cytochrome_CBB3	0.74
PF07690	MFS_1	0.74
PF13419	HAD_2	0.74

COG ID	Name	Functional Category	% Frequency in 136 Family Scaffolds
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	0.74
COG3548	Uncharacterized membrane protein	Function unknown [S]	0.74
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	0.74
COG4123	tRNA1(Val) A37 N6-methylase TrmN6	Translation, ribosomal structure and biogenesis [J]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	78.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.47 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	77.94 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.74 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.74 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	75.00 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	2.94 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.74 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.74 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	75.00 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	2.94 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.74 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.74 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000571\|JGI1358J11329_10103096	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300003324\|soilH2_10132298	All Organisms → cellular organisms → Bacteria	5004	Open in IMG/M
3300004281\|Ga0066397_10159038	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300004643\|Ga0062591_101884475	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300005093\|Ga0062594_101489721	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	693	Open in IMG/M
3300005328\|Ga0070676_10849983	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	677	Open in IMG/M
3300005334\|Ga0068869_101232166	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	658	Open in IMG/M
3300005339\|Ga0070660_100961541	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300005343\|Ga0070687_100181264	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1262	Open in IMG/M
3300005343\|Ga0070687_101088101	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300005345\|Ga0070692_10329273	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	942	Open in IMG/M
3300005354\|Ga0070675_100199039	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1738	Open in IMG/M
3300005365\|Ga0070688_101150327	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622	Open in IMG/M
3300005440\|Ga0070705_101368293	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300005441\|Ga0070700_100801103	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	759	Open in IMG/M
3300005444\|Ga0070694_100869153	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300005444\|Ga0070694_100984207	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300005457\|Ga0070662_100099158	All Organisms → cellular organisms → Bacteria	2202	Open in IMG/M
3300005466\|Ga0070685_10782078	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300005518\|Ga0070699_100361307	All Organisms → cellular organisms → Bacteria	1309	Open in IMG/M
3300005535\|Ga0070684_100820929	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300005535\|Ga0070684_102033633	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300005544\|Ga0070686_100690764	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	813	Open in IMG/M
3300005545\|Ga0070695_100540329	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	907	Open in IMG/M
3300005545\|Ga0070695_100575453	All Organisms → cellular organisms → Bacteria → Acidobacteria	881	Open in IMG/M
3300005546\|Ga0070696_100013793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5427	Open in IMG/M
3300005546\|Ga0070696_101289361	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M
3300005564\|Ga0070664_100966747	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300005564\|Ga0070664_102153112	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300005577\|Ga0068857_100815086	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	892	Open in IMG/M
3300005713\|Ga0066905_102205284	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300005719\|Ga0068861_101069613	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	774	Open in IMG/M
3300006058\|Ga0075432_10242735	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	728	Open in IMG/M
3300006169\|Ga0082029_1270677	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300006237\|Ga0097621_102274219	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300006358\|Ga0068871_100042138	All Organisms → cellular organisms → Bacteria	3663	Open in IMG/M
3300006797\|Ga0066659_10923450	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	729	Open in IMG/M
3300006844\|Ga0075428_100747993	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1040	Open in IMG/M
3300006854\|Ga0075425_101020133	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	944	Open in IMG/M
3300006871\|Ga0075434_100879762	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	911	Open in IMG/M
3300006903\|Ga0075426_10727772	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	745	Open in IMG/M
3300006904\|Ga0075424_100322158	All Organisms → cellular organisms → Bacteria	1646	Open in IMG/M
3300006904\|Ga0075424_101987971	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300006969\|Ga0075419_10405314	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300006969\|Ga0075419_10434799	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	904	Open in IMG/M
3300007004\|Ga0079218_10842921	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	889	Open in IMG/M
3300007076\|Ga0075435_100210208	All Organisms → cellular organisms → Bacteria	1650	Open in IMG/M
3300009012\|Ga0066710_103678598	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300009094\|Ga0111539_13442966	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300009100\|Ga0075418_12712780	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300009162\|Ga0075423_11409217	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	746	Open in IMG/M
3300009176\|Ga0105242_11635295	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	679	Open in IMG/M
3300009177\|Ga0105248_12995925	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300009444\|Ga0114945_10453634	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	768	Open in IMG/M
3300009610\|Ga0105340_1308182	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	692	Open in IMG/M
3300009691\|Ga0114944_1133005	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	967	Open in IMG/M
3300010046\|Ga0126384_11040162	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	748	Open in IMG/M
3300010047\|Ga0126382_10096190	All Organisms → cellular organisms → Bacteria	1899	Open in IMG/M
3300010371\|Ga0134125_10661746	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1153	Open in IMG/M
3300010373\|Ga0134128_11847486	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300010400\|Ga0134122_10959594	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	833	Open in IMG/M
3300010401\|Ga0134121_11802764	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	638	Open in IMG/M
3300011119\|Ga0105246_11576798	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
3300011430\|Ga0137423_1176413	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	644	Open in IMG/M
3300011445\|Ga0137427_10081067	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1298	Open in IMG/M
3300011445\|Ga0137427_10111895	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1107	Open in IMG/M
3300012040\|Ga0137461_1257921	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300012041\|Ga0137430_1225275	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300012159\|Ga0137344_1100602	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300012160\|Ga0137349_1010571	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1351	Open in IMG/M
3300012211\|Ga0137377_10617903	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1020	Open in IMG/M
3300012212\|Ga0150985_105566445	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300012948\|Ga0126375_10292318	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1127	Open in IMG/M
3300013296\|Ga0157374_11034276	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	841	Open in IMG/M
3300013308\|Ga0157375_13572372	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300014154\|Ga0134075_10556490	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300014745\|Ga0157377_10557692	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	810	Open in IMG/M
3300014969\|Ga0157376_10125154	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2285	Open in IMG/M
3300014969\|Ga0157376_10878256	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300015245\|Ga0137409_10871621	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	736	Open in IMG/M
3300015373\|Ga0132257_102482607	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	673	Open in IMG/M
3300015374\|Ga0132255_103522964	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	666	Open in IMG/M
3300017792\|Ga0163161_10558589	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	939	Open in IMG/M
3300018027\|Ga0184605_10494541	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300018052\|Ga0184638_1166503	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	789	Open in IMG/M
3300018052\|Ga0184638_1277899	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300018422\|Ga0190265_10508317	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1318	Open in IMG/M
3300018422\|Ga0190265_11233973	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	865	Open in IMG/M
3300018422\|Ga0190265_12441828	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	622	Open in IMG/M
3300018422\|Ga0190265_13379318	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300018429\|Ga0190272_10547413	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	998	Open in IMG/M
3300018429\|Ga0190272_11238726	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	736	Open in IMG/M
3300018429\|Ga0190272_11914756	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624	Open in IMG/M
3300018429\|Ga0190272_12473838	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300018433\|Ga0066667_12137011	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300018469\|Ga0190270_13424942	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300018476\|Ga0190274_12094282	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	662	Open in IMG/M
3300018476\|Ga0190274_12122795	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300018476\|Ga0190274_12150916	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	655	Open in IMG/M
3300019232\|Ga0180114_1131940	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	750	Open in IMG/M
3300019263\|Ga0184647_1321313	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	911	Open in IMG/M
3300019377\|Ga0190264_10524341	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	819	Open in IMG/M
3300019868\|Ga0193720_1037579	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	691	Open in IMG/M
3300019874\|Ga0193744_1048633	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	811	Open in IMG/M
3300021080\|Ga0210382_10433082	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300021082\|Ga0210380_10433964	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300021082\|Ga0210380_10588908	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300021357\|Ga0213870_1106120	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	868	Open in IMG/M
3300025155\|Ga0209320_10423680	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300025918\|Ga0207662_11358184	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300025921\|Ga0207652_10955229	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300025923\|Ga0207681_10405119	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1102	Open in IMG/M
3300025923\|Ga0207681_11546029	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300025926\|Ga0207659_10069756	All Organisms → cellular organisms → Bacteria	2561	Open in IMG/M
3300025934\|Ga0207686_10103826	All Organisms → cellular organisms → Bacteria	1903	Open in IMG/M
3300025937\|Ga0207669_11550799	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300025937\|Ga0207669_11866790	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300025945\|Ga0207679_11962687	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300025945\|Ga0207679_12006305	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300025986\|Ga0207658_11443875	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629	Open in IMG/M
3300026095\|Ga0207676_11206812	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	750	Open in IMG/M
3300026116\|Ga0207674_10651146	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1017	Open in IMG/M
3300027835\|Ga0209515_10038693	All Organisms → cellular organisms → Bacteria	3915	Open in IMG/M
3300027907\|Ga0207428_11024889	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300030990\|Ga0308178_1178150	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300031226\|Ga0307497_10072363	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1273	Open in IMG/M
3300031231\|Ga0170824_111935354	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300031421\|Ga0308194_10374464	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300031538\|Ga0310888_10438991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	772	Open in IMG/M
3300031538\|Ga0310888_10774122	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300031740\|Ga0307468_101227293	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	678	Open in IMG/M
3300031824\|Ga0307413_11548270	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300032003\|Ga0310897_10229024	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	823	Open in IMG/M
3300032012\|Ga0310902_11210198	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300032174\|Ga0307470_11202438	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	616	Open in IMG/M
3300033811\|Ga0364924_013873	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1531	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	63.97%
Host-Associated	Host-Associated	36.03%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	48.53%
Plants	Host-Associated → Plants	36.03%
Aquatic	Environmental → Aquatic	15.44%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	47.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere	27.94%
Sediment	Environmental → Aquatic → Sediment	8.09%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.62%
Freshwater	Environmental → Aquatic → Freshwater	5.88%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.47%
Roots	Host-Associated → Plants → Roots	1.47%
Floodplain	Environmental → Terrestrial → Floodplain	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	32.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	17.65%
Loam	Environmental → Terrestrial → Soil → Loam	15.44%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.29%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.09%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.41%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.21%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.47%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.47%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.47%
Lake	Environmental → Aquatic → Freshwater → Lake	0.74%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	17.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.29%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.09%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.41%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.68%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.94%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.21%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.21%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.21%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	1.47%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	1.47%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.47%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.47%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.74%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.24%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.29%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.35%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	5.88%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	4.41%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.41%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	3.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.68%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.94%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.21%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.21%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.21%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.21%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.21%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	1.47%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	1.47%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.47%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.47%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.47%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.47%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.47%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.47%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.47%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.47%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.74%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.74%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.74%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.74%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.74%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000571	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW60B uncontaminated upgradient, 5.4 m	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009444	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3	Environmental	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009691	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP2	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011430	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT600_2	Environmental	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300012040	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT746_2	Environmental	Open in IMG/M
3300012041	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT754_2	Environmental	Open in IMG/M
3300012159	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT500_2	Environmental	Open in IMG/M
3300012160	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT630_2	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019232	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT530_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019263	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019868	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s1	Environmental	Open in IMG/M
3300019874	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a1	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021357	Freshwater microbial communities from subterranean cave lake in Wind Cave National Park, South Dakota, United States - WICALVC2017	Environmental	Open in IMG/M
3300025155	Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 4	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027835	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW60B uncontaminated upgradient, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300030990	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300033811	Sediment microbial communities from East River floodplain, Colorado, United States - 28_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1358J11329_101030961	3300000571	Groundwater	MRHVSRIRVPKPLRATKFLSLGSADRKVGLFAEFFNLFNTVNFGGSYTGNSRSATFRQPTGFLPGIGYPRQAQLGVRFLF*
soilH2_101322984	3300003324	Sugarcane Root And Bulk Soil	SINAGRGDATYVFDMRVTKFLSLGSTDRRVGLFAEFFNLFNTTNFGGSYTGNARSATFRQPTGFIPGIGYPRQAQLGVRFLF*
Ga0066397_101590382	3300004281	Tropical Forest Soil	RTTKFFDLGGGGNRKLGVFVEAFNLFNTANFGGSFSGNARSTNFRQPTDFVPGIGYARQLQLGARFLF*
Ga0062591_1018844752	3300004643	Soil	DRYVDPATGQQVSINAGRGDNTVVLDLRATKFFDLGGARRIATFVEVFNALNNVNFGGNYTGNGRSVLFRQPSGGFIPGIGYPRQVQLGARFLF*
Ga0062594_1014897211	3300005093	Soil	DNTFVFDMRSTKFFNLGGGGDRKIGAFVEFFNLFNTANFGAQYQGNGRSATFRQPNGYIPGIGYPRQVQLGARFLF*
Ga0070676_108499831	3300005328	Miscanthus Rhizosphere	DPATGQQVSINAGRGDNTVVVDLRTTKFFSLRGEQKVGVFVELFNLLNASNFGGSYTGNARSTNFRLPSGGFVPGIGYPRQLQLGARFTF*
Ga0068869_1012321661	3300005334	Miscanthus Rhizosphere	GSDLNADGTNNDRYIDPATGTQVSYNAGRGDPTYLMDLRTTKFFDLGGGGNRKVGVFVEAFNLFNTANFGGSYSGNARSTNFRQPTDFVPGIGYARQVQLGARFLF*
Ga0070660_1009615412	3300005339	Corn Rhizosphere	FFDLGGAGGRKLGVFVEAFNLFNTANFGGSFSGNARSTNFRQPTDFVPGIGYARQVQLGARFLF*
Ga0070687_1001812641	3300005343	Switchgrass Rhizosphere	DLNRDGNSSATSGGDRYVDPATGQQVSLNSARGDNTFVFDMRSTKFLNLGSSDRKIGLFVEFFNLFNTANFGAQYTGNGRSSSFRQPNGYIPGIGYPRQVQLGARFLF*
Ga0070687_1010881012	3300005343	Switchgrass Rhizosphere	KQVSINAARGDATYVFDMRVTKFLSLGSADRKVGLFAEFFNLFNTANFGGSYTGNARSATFRQPTGFIPGIGYPRQAQLGMRFLF*
Ga0070692_103292732	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	GTNNDRYIDPSTGQQVSYNAGRGDPTYLMDLRTTKFFDLGGGGNRKVGVFVEAFNLFNTANFGGSYSGNARSTNFRQPTDFVPGIGYARQVQLGARFLF*
Ga0070675_1001990391	3300005354	Miscanthus Rhizosphere	YLMDLRTTKFFDLGGGGNRKVGVFVEAFNLFNTANFGGSYSGNARSTNFRQPTDFVPGIGYARQVQLGARFLF*
Ga0070688_1011503272	3300005365	Switchgrass Rhizosphere	DGTNNDRYIDPSTGQQVSYNAGRGDPTYLMDLRTTKFFDLGGGGNRKVGVFVEAFNLFNTANFGGSYSGNARSTNFRQPTDFVPGIGYARQVQLGARFLF*
Ga0070705_1013682932	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	TGKQVSLNSARGDHTIVLDLRSTKFFSLTGERKIGVFVEAFNLLNNVNFGGSYTGNATSTNFRQPSGGFIPGIGYPRQVQLGARFLF*
Ga0070700_1008011032	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MCLSDLGLRHDLRTTKFFDLGGAGSRKLGVFVEAFNLFNTANFGGSFSGNARSTNFRQPTDFVPGIGYARQVQLGARLLF*
Ga0070694_1008691531	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	SARGDKTTVVDLRSTKFIPLGGDKKLGIFVELFNAFNTANFGANYSGNASSVNFRQPTGFIPGIGYPRQVQIGSRLLF*
Ga0070694_1009842072	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	GRGDPTYLMDLRTTKFFDLGGGGNRKIGVFIEAFNLFNTANFGGSFSGNARSTNFRQPTDFVPGIGYARQVQLGARFLF*
Ga0070662_1000991585	3300005457	Corn Rhizosphere	TAGSDLNADGTNNDRYIDPSTGQQVSYNAGRGDPTYLMDLRTTKFFDLGGGGNRKVGVFVEAFNLFNTANFGGSYSGNARSTNFRQPTDFVPGIGYARQVQLGARFLF*
Ga0070685_107820781	3300005466	Switchgrass Rhizosphere	GDNTFVFDMRSTKFLNLGSSDRKIGLFVEFFNLFNTANFGAQYTGNGRSSSFRQPNGYIPGIGYPRQVQLGARFLF*
Ga0070699_1003613072	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	GRGDNTVVLDLRTTKFFDLGGERKVGLFAEFFNLLNTANFGAAYTGNGRSSSFRQPNAFVPGIGYPRQAQLGVRFLF*
Ga0070684_1008209291	3300005535	Corn Rhizosphere	VFDMRVTKFLSLGSADRKVGLFAEFFNLFNTANFGGSYTGNARSATFRQPTGFIPGIGYPRQAQLGMRFLF*
Ga0070684_1020336331	3300005535	Corn Rhizosphere	QVSLNSARGDNTFVFDMRSTKFFNLGNADRKIGVFVEFFNLFNTANFGSQYTGNGRSATFRQPNGYIPGIGYPRQVQLGARFLF*
Ga0070686_1006907641	3300005544	Switchgrass Rhizosphere	GRGDPTYLVDLRTTKFFDLGGAGGRKLGVFVEAFNLFNTANFGGSFSGNARSTNFRQPTDFVPGIGYARQVQLGARFLF*
Ga0070695_1005403292	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	TKFFNLGAGDSRRVGVFVEAFNLFNTANFGGQYSGNSRSTNFRQPTDYVPGIGYARQLQLGARFTF*
Ga0070695_1005754531	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	IDLRSTKFLAVGGDRKLGIFIELFNLLNTANFGANYSGNASSVNFRQPTGFIPSIGYPRQVQIGSRFLF*
Ga0070696_1000137938	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	ADGNNNDRYIDPATGKQLSINAARGDNTVVLDLRATKFFDLGSDRRIATFVEVFNALNNVNFGGSYTGNGRSVLFRQPSGGFIPGIGYPRQLQLGARFLF*
Ga0070696_1012893611	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	DLNADGTNNDRWVDPATGKQVSINSARGDNTTVIDLRSTKFLAVGGDRKLGIFIELFNLLNTANFGANYSGNASSVNFRQPTGFIPSIGYPRQVQIGSRFLF*
Ga0070664_1009667471	3300005564	Corn Rhizosphere	NTFVFDMRSTKFFNTGSADRKIGVFVEFFNLFNTANFGSQYQGNGRSATFQQPNGYIPGIGYPRQVQLGARFLF*
Ga0070664_1021531121	3300005564	Corn Rhizosphere	NRDGNSGTNGGDRYVDPTTGQQVSLNSARGDNTFVFDMRSTKFFNLGNADRKIGVFVEFFNLFNTANFGSQYTGNGRSATFRQPNGYIPGIGYPRQVQLGARFLF*
Ga0068857_1008150861	3300005577	Corn Rhizosphere	DPSTGQQVSYNAGRGDPTYLMDLRTTKFFDLGGGGNRKVGVFVEAFNLFNTANFGGSYSGNARSTNFRQPTDFVPGIGYARQVQLGARFLF*
Ga0066905_1022052842	3300005713	Tropical Forest Soil	RYIDPATGQQVSINAGRGDATYVFDLRATKFVSLGSTDRKVGLFAEFFNLFNTANFGGSYTGNARSATFRQPTGFIPGIGYPRQAQLGVRFLF*
Ga0068861_1010696131	3300005719	Switchgrass Rhizosphere	DLNADGNNNDRWIDPATGQQVSINAGRGDSTVVLDLRGTKFFALGAERRLAVFAEIFNVLDNANFGGSYTGNGRSVLFRQPSGGFIPGIGYPRQLQLGARFLF*
Ga0075432_102427351	3300006058	Populus Rhizosphere	DPTTGQQVSLNSARGDNTFVFDMRSTKFFNLGNADRKIGVFVEFFNLFNTANFGSQYTTNGRSTSFRQPNGYIPGIGYPRQIQLGARFLF*
Ga0082029_12706771	3300006169	Termite Nest	DGNNNDRYIDPATGKQVSLNSARGDNTYVFDIRSTKFFALGGGGDRKIGLFAELFNAFNTANFGGSYGGNARATTFRQPTGFIPGIGGPRQLQLGARFLF*
Ga0097621_1022742192	3300006237	Miscanthus Rhizosphere	AGTDLNRDGNSSATSGGDRYVDPATGQQVSLNSARGDNTFVFDMRSTKFLNLGSSDRKIGLFVEFFNLFNTANFGAQYTGNGRSSSFRQPNGYIPGIGYPRQVQLGARFLF*
Ga0068871_1000421381	3300006358	Miscanthus Rhizosphere	GLRHDLRTTKFFDLGGAGSRKLGVFVEAFNLFNTANFGGSFSGNARSTNFRQPTDFVPGIGYARQVQLGARLLF*
Ga0066659_109234501	3300006797	Soil	NADGNNNDRYIDPATGQQLSINAGRGDATYVFDMRATKFVSLGSTDRKVGLFAEFFNLFNTVNFGGSYAGNARSATFRQPTGFIPGIGYPRQAQLGVRFLF*
Ga0075428_1007479932	3300006844	Populus Rhizosphere	QVSYNAGRGDPTYLFDLRTTKFFNLGAGDTRRLGVFVEAFNLFNTANFGGQYSGNSRSTNFRQPTDFVPGIGYARQVQIGARFLF*
Ga0075425_1010201332	3300006854	Populus Rhizosphere	RYIDPATGKQVSINAGRGDATYVFDMRATKFLSLGSTDRKVGLFAEFFNLFNTANFGGSYTGNARSATFRQPTGFIPGIGYPRQVQLGMRLLF*
Ga0075434_1008797621	3300006871	Populus Rhizosphere	TGQQVSINAGRGDATYVFDMRATKFLSLGSTDRKVGLFAEFFNLFNTANFGGSYTGNARSATFRQPTGFIPGIGYPRQVQLGMRLLF*
Ga0075426_107277723	3300006903	Populus Rhizosphere	TYVFDLRATKFLSLGSTDRKVGLFAEFFNLFNTANFGGSYTGNARSATFRQPTGFIPGIGYPRQVQLGMRILF*
Ga0075424_1003221585	3300006904	Populus Rhizosphere	GRGDATYVFDMRATKFVSLGSTDRRVGLFAEFFNLFNTVNFGGSYTGNARSATFRQPTGFIPGIGYPRQAQLGVRYLF*
Ga0075424_1019879712	3300006904	Populus Rhizosphere	GDRYIDPATGKQVSLNSARGDNTFVFDMRATKFVNVGAGDRKVGIFVEMFNLFNTANFGAQYQGNGRSATFRQPNGYIPGIGYPRQVQLGARFQF*
Ga0075419_104053141	3300006969	Populus Rhizosphere	TNNDRYIDPATGTQVSYNAGRGDPTYLMDLRTTKFFDLGGAGGRKLGVFVEAFNLFNTANFGGSFSGNARSTNFRQPTDFVPGIGYARQVQLGARFLF*
Ga0075419_104347993	3300006969	Populus Rhizosphere	GTDLNRDGNSGNNGGDRYVDPVTGVQTSLNSARGDNTFVFDMRSTKFFNLGNADRKIGAFVEFFNLFNTANFGSQYTTNGRSTSFRQPNGYIPGIGYPRQIQLGARFLF*
Ga0079218_108429211	3300007004	Agricultural Soil	STVVLDLRTTKFFDLGSERRIGVFVEAFNLLNNANFGGGYVGNGRSVLFGQPSGSFIPGIGYPRQVQLGARFLF*
Ga0075435_1002102081	3300007076	Populus Rhizosphere	INSARGDKTTVVDLRSTKFIPLGGDKKLGVFVELFNAFNTANFGANYSGNASSVNFRQPTGFIPGIGYPRQVQIGSRLLF*
Ga0066710_1036785982	3300009012	Grasslands Soil	RYIDPATGEQVALSAARGDNTFVFDLRSTKFFTLSGDRKIGLFVEGFNLFNTNNFGAAYGGNARSATFRTPTGYIPSIGYPRQVQLGARFLF
Ga0111539_134429661	3300009094	Populus Rhizosphere	RDGNSGNNGGDRYVDPTTGQQASLNSARGDNTFVFDMRSTKFFNLGNADRKIGVFVEFFNLFNTANFGSQYTGNGRSATFRQPNGYIPGIGYPRQVQLGARFLF*
Ga0075418_127127801	3300009100	Populus Rhizosphere	DGISNNDRWIDPATGQQVSLNAGRGDPTVALDLRATKFFPLGGERRIGVFAEIFNVLNNVNLGGDFVGNGRSALFREPTGGFIPGIGYPRQLQLGARFLF*
Ga0075423_114092171	3300009162	Populus Rhizosphere	LNRDGNSGNNGGDHYVDPTTGQQASLNSARGDNTFVFDMRSTKFFNLGNADRKIGVFVEFFNLFNTANFGSQYTGNGRSTSFRLPNGYIPGIGYPRQVQLGARFLF*
Ga0105242_116352952	3300009176	Miscanthus Rhizosphere	DPATGKQLSINAARGDNTVVLDLRATKFFDLGSDRRIATFVEVFNALNNVNFGGSYTGNGRSVLFRQPSGGFIPGIGYPRQLQLGARFLF*
Ga0105248_129959252	3300009177	Switchgrass Rhizosphere	VFDMRSTKFFNLGSADRKIGVFVEFFNLFNTDNFGAQYTANGRSATFRQPNGYIPGIGYPRQVQLGARFQF*
Ga0114945_104536341	3300009444	Thermal Springs	IDASGKQVSIGAGRGDPTFVFDLRATKFVPFGGDRRLGLFVELFNVLNTVNHGNLYNGNARAATFQQPTGFIQSIGYPRQVQLGARFLF*
Ga0105340_13081821	3300009610	Soil	DLNADGTNNDRWVDPATGKQVSINSARGDNTTVVDLRSTKFLALGGDRKLGIFIELFNMFNTANFGANYSGNASSVNFRQPTGFIPSIGYPRQVQIGSRFLF*
Ga0114944_11330051	3300009691	Thermal Springs	NRDGLNNDRYIDPNTGKQVSVGAGRGDPTFVFDLRATKFVPFGGERRLGLFVELFNALNTVNHGNLYNGNARAATFRQPTGFIQSIGYPRQVQLGARFLF*
Ga0126384_110401621	3300010046	Tropical Forest Soil	DLNADGTNNDRFIDPTTGKQVSYNAGRGDPTYLVDFRTTKFFDLGGGGNRKLGVFVEAFNLFNTANFGGSFSGNARSTNFRQPTDFVPGIGYARQLQLGARFLF*
Ga0126382_100961905	3300010047	Tropical Forest Soil	GKQVSYNAGRGDPTYLVDFRTTKFFDLGGGGNRKLGVFVEAFNLFNTANFGGSFSGNARSTNFRQPTDFVPGIGYARQLQLGARFLF*
Ga0134125_106617462	3300010371	Terrestrial Soil	DRYIDPATGTQVSINSARGDATVVMDLRATKFFALGGERRVATFVEVFNVLNNVNFGGSYTGNGRSVVFRQPSGGFIPGIGYPRQLQLGARFLF*
Ga0134128_118474861	3300010373	Terrestrial Soil	INSARGDATVVMDLRATKFFALGGERRVATFVEVFNVLNNVNFGGSYTGNGRSVVFRQPSGGFIPGIGYPRQLQLGARFLF*
Ga0134122_109595941	3300010400	Terrestrial Soil	NADGTNNDRYIDPATGKQVSYNAGRGDPTYLMDLRTTKFFDLGGGGNRKLGVFVEAFNLFNTANFGGSFSGNARSTNFRQPTDFVPGIGYARQVQLGARFLF*
Ga0134121_118027641	3300010401	Terrestrial Soil	TFVFDIRSTKFFNLGGERKIGVFVETFNILNTVNFGGSFTGNVRSATYGQPTGFIPGIGGPRQVQLGARFLF*
Ga0105246_115767982	3300011119	Miscanthus Rhizosphere	DPATGKQVSINAARGDSTVVLDLRGTKFFALGGERRIGVFAEAFNLLNNANFGGGYTGNGRSVLFRQPSGSLIPGIGYPRTLQLGARFLF*
Ga0137423_11764131	3300011430	Soil	NLTAGSDLNQDGTNNDRWIDPATGQQVSLNAGRGDPTVVLDLRATKFFPLAGEWRLGVLVEVFNVLDNVNLGGDFNGNARSALFRQPTGGFIPGIGYPRQLQLGARLLF*
Ga0137427_100810673	3300011445	Soil	VDLRSTKFLALGGDRKLGIFVELFNVLNTANFGANYSGNASSVNFRQPTGFIPSIGYPRQVQIGSRFLF*
Ga0137427_101118951	3300011445	Soil	NADGTNNDRYIDPATGQQVSYNAGRGDPTYLFDLRTTKFFNLGAGDSRRVGVFVEAFNLFNTANFGGQYSGNSRSTNFRQPTDYVPGIGYARQLQLGARFIF*
Ga0137461_12579212	3300012040	Soil	DLNADGNNNDRWIDPATGKQVSINTARGDSTVVLDLRGTKFFALGGERRIGVFAEAFNLLNNANFGGGYTGNGRSVLFRQPSGSLIPGIGYPRTLQLGARFLF*
Ga0137430_12252752	3300012041	Soil	LNADGNNNDRWIDPATGQQMSINAGRGDSTVVLDLRGTKFFALGSERRLAVFAEVFNVLDNANFGGSYTGNGRSVLFRQPSGGFIPGIGYPRQLQLGARFLF*
Ga0137344_11006022	3300012159	Soil	TAGTDLNADGNNNDRWIDPATGKQVSINTARGDSTVVLDLRGTKFFALGGERRIGVFAEAFNLLNNANFGGGYTGNGRSVLFRQPSGSLIPGIGYPRTLQLGARFLF*
Ga0137349_10105711	3300012160	Soil	LRTTKFFNLGAGDSRRVGVFVEAFNLFNTANFGGSFSGNSRSTNFRQPTDYVPGIGYARQLQLGARFTF*
Ga0137377_106179032	3300012211	Vadose Zone Soil	EQVSLNSARGDNTFVFDMRSTKFFNLSGGGDRKIGAFVEFFNLFNTANFGAQYQGNGRSATFRQPNGYIPGIGYPRQVQLGARFLF*
Ga0150985_1055664452	3300012212	Avena Fatua Rhizosphere	LNAARGDKTFVFDLRSTKYFSLGTSDRKVGLFVEAFNLFNTVNFGSAFGGNSRSATFRQPTGYMPSIGYPRQVQLGARFIF*
Ga0126375_102923182	3300012948	Tropical Forest Soil	RFIDPTTGKQVSYNAGRGDPTYLVDFRTTKFFDLGGGGNRKLGVFVEAFNLFNTANFGGSFSGNARSTNFRQPTDFVPGIGYARQLQLGARFLF*
Ga0157374_110342761	3300013296	Miscanthus Rhizosphere	TDLNRDGNSSATSGGDRYVDPATGQQVSLNSARGDNTFVFDMRSTKFLNLGSSDRKIGLFVEFFNLFNTANFGAQYTGNGRSSSFRQPNGYIPGIGYPRQVQLGARFLF*
Ga0157375_135723721	3300013308	Miscanthus Rhizosphere	DMRSTKFFNVGAGDRKVGIFVEMFNLFNTANFGAQYQGNGRSATFRQPNGYIPGIGYPRQIQLGARFQF*
Ga0134075_105564901	3300014154	Grasslands Soil	IDPATGKQVSINSGRGDPTVLLDMRLTKFLALGGERRLATFVEVFNVMNTVNFGGQYQGNGRSATFRQPNAFVPGVGYSRQLQLGARFLF*
Ga0157377_105576921	3300014745	Miscanthus Rhizosphere	AGADLNADGTNNDRYIDPSTGKQVSYNAGRGDPTYLVDLRTTKFFDLGGAGGRKLGVFVEAFNLFNTANFGGSFSGNARSTNFRQPTDFVPGIGYARQVQLGARFLF*
Ga0157376_101251543	3300014969	Miscanthus Rhizosphere	MWLSDLGLRHDLRTTKFFDLGGAGSRKLGVFVEAFNLFNTANFGGSFSGNARSTNFRQPTDFVPGIGYARQVQLGARLLF*
Ga0157376_108782561	3300014969	Miscanthus Rhizosphere	RGDATYVFDMRATKFVSLGSSDRKLGLFAEFFNLFNTANFGGSFTGNARSATFRQPTGFVPGIGYPRQAQLGMRFLF*
Ga0137409_108716211	3300015245	Vadose Zone Soil	AGADLNADGNNNDRMIDPATGKQVSLNAGRGDNTTVIDMRATKFISLGSGDRKLGLFAEFFNLLNTNNFGAAYGGNSRATTFRQPTGFIPGIGYPRQLQLGARFLF*
Ga0132257_1024826072	3300015373	Arabidopsis Rhizosphere	GTDLNRDGNSSATSGGDRYVDPATGQQVSLNSARGDNTFVFDMRATKFVNVGAGDRKVGIFVEMFNLFNTANFGAQYQGNGRSATFRQPNGYIPGIGYPRQVQLGARFQF*
Ga0132255_1035229642	3300015374	Arabidopsis Rhizosphere	AGADLNADGTNNDRYIDPSTGKQVSYNAGRGDPTYLMDLRTTKFFDLGGGGNRKVGVFIEAFNLFNTANFGGSYSGNARSTNFRQPTDFVPGIGYARQVQLGARFLF*
Ga0163161_105585891	3300017792	Switchgrass Rhizosphere	STGKQVSINAARGDATYVFDMRATKFLSLGTTDRKVGLFAEFFNLFNTANFGGSYTGNARSATFRQPTGFIPGIGYPRQAQLGVRVLF
Ga0184605_104945411	3300018027	Groundwater Sediment	NAARGDNTTVVDLRLTKYVSLGTADRKVGLFCEFFNLLNTANFGNSYSGNARSATFKQPSGFVPSIGYARQVQLGARFLF
Ga0184638_11665031	3300018052	Groundwater Sediment	VSYNAGRGDPTYVMDLRTTKFFNLGSGGARKIGVFIEGFNLFNTANFGGSFSGNSRSTNFRQPTDFVPGIGYARQ
Ga0184638_12778991	3300018052	Groundwater Sediment	TTVVDLRSTKFITLGGDRKLGIFVELFNVLNTSNFGANYSGNASSVNFRQPTGFIPSIGYPRQVQIGSRFLF
Ga0190265_105083171	3300018422	Soil	DLNADGNNNDRYIDPATLRQVSINSARGDSTLVLDVRGTKFFELGGDKKIGVFAELFNAFNNANFGGGYTGNARSVLFQQPSGSLIPGIGYPRTLQLGARFLF
Ga0190265_112339732	3300018422	Soil	NVNAGRGDPTVLLDLRTTKFVQLGGDRRIGLFVEMFNVLNNVNFGGQYNGNGRSAVFQQPNGFVPGIGYARQLQLGARFLF
Ga0190265_124418281	3300018422	Soil	RTVVFDTRVTKFIELGGARRLGLFAEFFNLFDTVNLGSSFNGNGSSATFREPSGGFVPGIGYPRQAQLGVRFLF
Ga0190265_133793181	3300018422	Soil	NNDRYIDPATGQQVSFNAARGDNTIVLDLRTTKFVELGGDRRVGLFLELFNVFNAVNFGNNYGGNARGATFRQPTAFLPSIGYPRQLQLGARFLF
Ga0190272_105474132	3300018429	Soil	PATGQMVSINAGRGDPTVLLDLRTTKFFPLGGERQLGVFVELFNAFNTANFGSSYNGNARSTSFQQPTGFVPGIGYPRQLQLGGRFLF
Ga0190272_112387261	3300018429	Soil	IERYIDPATGQMVSVNSARGDNTFVFDLRTTKFFELGAPERRIGVFVEMFNLFNTVNFGNSYNGNGRSSAFQQPNGFVPGIGYPRQVQLGVRFLF
Ga0190272_119147562	3300018429	Soil	VSLNAGRGDPTVVLDLRATKFFPLGGERRLGVLVEVFNLLDNVNLGGDFNGNGRSALFRQPTGGFIPGIGYPRQLQLGARFLF
Ga0190272_124738381	3300018429	Soil	IDPATGQQVSFNAARGDNTIVVDLRTTKFLELGGDRRVGLFVELFNVFNAVNFGNNYGGNARGATFRQPTAFLPSIGYPRQLQLGARFLF
Ga0066667_121370111	3300018433	Grasslands Soil	WIDPATGKQVSTNTGRGDPTALLDMRVTKFIALGGERRLATFIELFNVLNTVNFGGQYQGNGRSATFRQPNAFVPGIGYSRQLQLGARFLF
Ga0190270_134249421	3300018469	Soil	NNDRWVDPATGKQVSINTARGDSTVVLDLRGTKFFGLGGERRIGVFAEAFNLLNNANFGGGYTGNGRSVLFRQPSGSLIPGIGYPRTLQLGARFLF
Ga0190274_120942822	3300018476	Soil	IDPATGKQVSINTARGDSTVVLDLRGTKFFALGGERRIGVFAEAFNLLNNANFGGGYTGNGRSVLFRQPSGSLIPGIGYPRTLQLGARFLF
Ga0190274_121227951	3300018476	Soil	QVAYNAGRGDPTYLFDLRTTKFFDLGGGATRRIGVFIEAFNLFNTANFGGSFSGNARSTNFRQPTDFVPGIGYARQVQLGARFLF
Ga0190274_121509161	3300018476	Soil	QVSINAGRGDNTVVVDLRTTKFFSLTGERKIGVFVELFNLLNTSNFGGSYTGNARSTNFRLPAGGFVPGIGYPRQLQLGARFTF
Ga0180114_11319401	3300019232	Groundwater Sediment	ATGQQVHINAGRGDNTVVLDLRTTKFVELGGDRRLGLFAEFFNLFDTANFGERYQGNGRSTAFRQPNAFVPGIGYPRQAQLGVRFLF
Ga0184647_13213131	3300019263	Groundwater Sediment	MASARPYNLTAGRDLNADGTNNDRWVDPATGKQVSINAARGDSTVVLDLRGTKFFALGGERRIGVFAEAFNLLNNANFGGGYTGNGRSVLFRQPSGSLIPGIGYPRTLQLGARFLF
Ga0190264_105243412	3300019377	Soil	YVQDLRTTKVLGLGGERRLGVFAEFFNLLDMVNFGSSHTGNARSASFRQATGFIAGIGYPRQVQLGARFLFSPSLRKMESSLSRRVK
Ga0193720_10375791	3300019868	Soil	INAGRGDNTVVLDLRATKFFDLGSERRIATFVEVFNALNNVNFGGSYTGNGRSVLFRQPSGGFIPGIGYPRQVQLGARFLF
Ga0193744_10486331	3300019874	Soil	DGNNNDRYIDPATGQQVSLNSARGDRTTVIDMRATKFVTLGSAERKIGLFAEFFNLLNTNNFGGSYTGNARSATFRQPTGFIPGIGYPRQLQLGARFLF
Ga0210382_104330821	3300021080	Groundwater Sediment	DGNNNDRWINPATGKQVSINAGRGDPTQVLDVRSTKFFALGAERKIGVFAELFNALNNANFGGAYTGNARSVTFRQPSGTLIPGIGYPRTLQLGARFLF
Ga0210380_104339642	3300021082	Groundwater Sediment	KQVDINAARGDATYVVDLRTTKFFNLGASGARKIGVFVEAFNLFNTANFGASYSGNARSANFRQPTDFVPGIGYARQVQLGARFLF
Ga0210380_105889081	3300021082	Groundwater Sediment	GTNNDHYRDPATGQQVAINSARGDSTFVFDMRTTKFFGLGGDKKVGLFVEFFNLLNTVNLGGAYNGNGRSAAFRQPTGAYMPSIGYPRQVQLGARFLF
Ga0213870_11061201	3300021357	Freshwater	GDNTFVFDMRSTKFLPLGEERKLGIFVEFFNLFNTANFGGQYSGNGRSVNFRQPTGFMPSIGYPRQVQLGARFLF
Ga0209320_104236801	3300025155	Soil	GKQVSVNAGRGDNTFVFDLRATKFVPFGGDRRLGLFVELFNVLNTVNHGNLYVGNGRSVNFQKPTGYIQSIGYPRQVQLGARFLF
Ga0207662_113581842	3300025918	Switchgrass Rhizosphere	YVFDMRATKFLSLGTTDRKVGLFAEFFNLFNTANFGGSYTGNARSATFRQPTGFIPGIGYPRQAQLGMRFLF
Ga0207652_109552292	3300025921	Corn Rhizosphere	PTYLVDLRTTKFFDLGGAGGRKLGVFVEAFNLFNTANFGGSFSGNARSTNFRQPTDFVPGIGYARQVQLGARFLF
Ga0207681_104051191	3300025923	Switchgrass Rhizosphere	LNADGNNNDRYIDPATGKQVSINAGRGDATYVFDMRATKFVSLGSTDRKVGLFVEIFNLFNTTNFGGSYTGNARSATFRQPTGFIPGIGYPRQAQLGVRFLF
Ga0207681_115460291	3300025923	Switchgrass Rhizosphere	LNADGTNNDRYIDPSTGQQVSYNAGRGDPTYLMDLRTTKFFDLGGGGNRKIGVFIEAFNLFNTANFGGSFSGNARSTNFRQPTDFVPGIGYARQVQLGARFLF
Ga0207659_100697563	3300025926	Miscanthus Rhizosphere	NAGRGDPTYLVDLRTTKFFDLGGAGGRKLGVFVEAFNLFNTANFGGSFSGNARSTNFRQPTDFVPGIGYARQVQLGARFLF
Ga0207686_101038261	3300025934	Miscanthus Rhizosphere	VSINSARGDATVVMDLRATKFFALGGERRVATFVEVFNVLNNVNFGGSYTGNGRSVVFRQPSGGFIPGIGYPRQLQLGARFLF
Ga0207669_115507992	3300025937	Miscanthus Rhizosphere	AGRGDPTYLMDLRTTKFFDLGGGGNRKIGVFIEAFNLFNTANFGGSFSGNARSTNFRQPTDFVPGIGYARQVQLGARFLF
Ga0207669_118667901	3300025937	Miscanthus Rhizosphere	DPTYLVDLRTTKFFDLGGAGGRKLGVFVEAFNLFNTANFGGSFSGNARSTNFRQPTDFVPGIGYARQVQLGARFLF
Ga0207679_119626872	3300025945	Corn Rhizosphere	DPSSGKQVSYNAGRGDPTYLMDLRTTKFFNLGGGSNRKVGVFVEAFNLFNTANFGGSYSGNSRSTNFRQPTDFVPGIGYARQVQLGGRFLF
Ga0207679_120063051	3300025945	Corn Rhizosphere	TTGQQVSLNSARGDNTFVFDMRSTKFFNLGNADRKIGVFVEFFNLFNTANFGSQYTGNGRSATFRQPNGYIPGIGYPRQVQLGARFLF
Ga0207658_114438752	3300025986	Switchgrass Rhizosphere	NRDGNSSATSGGDRYVDPATGQQVSLNSARGDNTFVFDMRSTKFLNLGSSDRKIGLFVEFFNLFNTANFGAQYTGNGRSSSFRQPNGYIPGIGYPRQVQLGARFLF
Ga0207676_112068122	3300026095	Switchgrass Rhizosphere	LNSARGDNTFVFDMRSTKFLNLGSSDRKIGLFVEFFNLFNTANFGAQYTGNGRSSSFRQPNGYIPGIGYPRQVQLGARFLF
Ga0207674_106511461	3300026116	Corn Rhizosphere	AGADLNADGTNNDRYIDPATGKQVAYNAGRGDPTYLVDLRTTKFFDLGGAGSRKLGVFVEAFNLFNTANFGGSFSGNARSTNFRQPTDFVPGIGYARQVQLGARFLF
Ga0209515_100386933	3300027835	Groundwater	MRHVSRIRVPKPLRATKFLSLGSADRKVGLFAEFFNLFNTVNFGGSYTGNSRSATFRQPTGFLPGIGYPRQAQLGVRFLF
Ga0207428_110248892	3300027907	Populus Rhizosphere	SGTNGGDRYVDPTTGQQVSLNSARGDNTFVFDMRSTKFFNLGNADRKIGVFVEFFNLFNTANFGSQYTGNGRSATFRQPNGYIPGIGYPRQVQLGARFLF
Ga0308178_11781501	3300030990	Soil	TNNDRYIDPATGKQVSYNAGRGDPTYLMDLRTTKFFDLGGGGNRKLGVFIEAFNLFNTANFGGSFSGNARSTNFRQPTDFVPGIGYARQVQLGARFLF
Ga0307497_100723631	3300031226	Soil	GKQVSINSGRGDATYVFDLRATKFVSLGSTDRKVGLFAEFFNLFNTANFGGSYTGNARSATFRQPTGFVPGIGYPRQAQLGVRFLF
Ga0170824_1119353542	3300031231	Forest Soil	SLNSARGDNTTVVDLRLTKYVSLGTADRKIGLFAEFFNLLNTANFGSSYSGNARSATFRQPSGFIPSIGYARQAQLGARFLF
Ga0308194_103744642	3300031421	Soil	GTNNDRWVDPATGKQVSINAARGDNTKVVDLRSTKFIGLGGDRKLGIFVELFNMFNTANFGSSYSGNASSVNFRQPTGFMPSIGYPRQLQIGSRFLF
Ga0310888_104389912	3300031538	Soil	TTVVDLRSTKFIPLGEDRKLGIFVELFNAFNTANFGASYSGNASSVNFRQPTGFIPGVGYPRQVQIGSRFLF
Ga0310888_107741222	3300031538	Soil	LNADGNNNDRYVDPSTGKQVSINAARGDATYVFDMRATKFVSLGSTDRKVGLFAEFFNLFNTANFGGSYTGNARSATFRQPTGFIPGIGYPRQAQLGVRFLF
Ga0307468_1012272931	3300031740	Hardwood Forest Soil	RPYNLTAGRDLNADGTNNDRWIDPATGKQVSINSARGDKTTVVDVRSTKFIPLGGDKKLGIFVELFNAFNTANFGASYSGNASSVNFRQPTGFIPGIGYPRLVQLGSRFLF
Ga0307413_115482701	3300031824	Rhizosphere	TVVMDLRTTKFVRIGGGDRQVGLFAEFFNLFNTANFGGQYQGNGRSTTFRQPTGFVPGIGYPRQAQLGLRFLF
Ga0310897_102290241	3300032003	Soil	RYIDPATGQQVSINAGRGDNTVVVDLRTTKFFSLRGEQKVGVFVELFNLLNASNFGGSYTGNARSTNFRLPSGGFVPGIGYPRQLQLGARFTF
Ga0310902_112101981	3300032012	Soil	MWLSDLGLRHDLRTTKFFDLGGAGSRKLGVFVEAFNLFNTANFGGSFSGNARSTNFRQPTDFVPGIGYARQVQLGARLLF
Ga0307470_112024381	3300032174	Hardwood Forest Soil	GDPTYLMDLRTTKFFDLGGGGNRKVGVFIEAFNLFNTANFGGSFSGNARSTNFRQPTDFVPGIGYARQVQLGARFLF
Ga0364924_013873_2_307	3300033811	Sediment	NRDGINNDRWIDPATGQQVSLNAGRGDPTVVLDLRATKFFPLGGERRIGVLVEVFNALDNVNLGGDFTGNSRSALFRQPTGGFIPGIGYPRQLQLGARFLF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F057657

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences