Metagenome / Metatranscriptome Family F057591

Basic Information
Family ID	F057591
Family Type	Metagenome / Metatranscriptome
Number of Sequences	136
Average Sequence Length	42 residues
Representative Sequence	LYKHWGITGEEAKKPNRAIHFNAMQPWRVARDGSVHDAMFS
Number of Associated Samples	104
Number of Associated Scaffolds	136

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.22 %
% of genes near scaffold ends (potentially truncated)	96.32 %
% of genes from short scaffolds (< 2000 bps)	94.85 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.26

Most Common Taxonomy
Group	Bacteria (88.235 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (29.412 % of family members)
Environment Ontology (ENVO)	Unclassified (30.147 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (65.441 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 7.25% β-sheet: 8.70% Coil/Unstructured: 84.06%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 136 Family Scaffolds
PF13442	Cytochrome_CBB3	49.26
PF02738	MoCoBD_1	3.68
PF00293	NUDIX	2.94
PF00034	Cytochrom_C	1.47
PF05187	ETF_QO	0.74
PF00756	Esterase	0.74
PF13340	DUF4096	0.74
PF07690	MFS_1	0.74
PF13701	DDE_Tnp_1_4	0.74
PF00561	Abhydrolase_1	0.74
PF05598	DUF772	0.74
PF03404	Mo-co_dimer	0.74
PF01799	Fer2_2	0.74
PF03453	MoeA_N	0.74
PF00174	Oxidored_molyb	0.74
PF00753	Lactamase_B	0.74

COG ID	Name	Functional Category	% Frequency in 136 Family Scaffolds
COG0303	Molybdopterin Mo-transferase (molybdopterin biosynthesis)	Coenzyme transport and metabolism [H]	0.74
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.74
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	0.74
COG2440	Ferredoxin-like protein FixX	Energy production and conversion [C]	0.74
COG3915	Uncharacterized conserved protein	Function unknown [S]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.24 %
Unclassified	root	N/A	11.76 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.24 %
Unclassified	root	N/A	11.76 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.24 %
Unclassified	root	N/A	11.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	60.29 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	19.12 %
Unclassified	root	N/A	11.76 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	58.09 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	12.50 %
Unclassified	root	N/A	11.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	58.09 %
Unclassified	root	N/A	11.76 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8.09 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.74 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	58.09 %
Unclassified	root	N/A	11.76 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.47 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.74 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.74 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.74 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	58.09 %
Unclassified	root	N/A	11.76 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.47 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.74 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.74 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.74 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	58.09 %
Unclassified	root	N/A	11.76 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.47 %
Mesorhizobium plurifarium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium plurifarium	0.74 %
Pseudomonas stutzeri group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas stutzeri group	0.74 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.74 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	58.09 %
Unclassified	root	N/A	11.76 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.47 %
Pseudomonas stutzeri subgroup	species subgroup	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas stutzeri group → Pseudomonas stutzeri subgroup	0.74 %
Mesorhizobium plurifarium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium plurifarium	0.74 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.74 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	58.09 %
Unclassified	root	N/A	11.76 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.47 %
Pseudomonas stutzeri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas stutzeri group → Pseudomonas stutzeri subgroup → Pseudomonas stutzeri	0.74 %
Mesorhizobium plurifarium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium plurifarium	0.74 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.74 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.74 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459004\|F62QY1Z02JRKN2	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300005436\|Ga0070713_101400224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	678	Open in IMG/M
3300005561\|Ga0066699_11247540	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300005764\|Ga0066903_100486062	All Organisms → cellular organisms → Bacteria	2084	Open in IMG/M
3300005764\|Ga0066903_106531035	Not Available	607	Open in IMG/M
3300005764\|Ga0066903_108970847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	507	Open in IMG/M
3300006047\|Ga0075024_100708292	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300006052\|Ga0075029_101271993	Not Available	516	Open in IMG/M
3300006174\|Ga0075014_100136451	All Organisms → cellular organisms → Bacteria	1184	Open in IMG/M
3300006174\|Ga0075014_100301262	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	845	Open in IMG/M
3300006176\|Ga0070765_100994912	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	793	Open in IMG/M
3300006176\|Ga0070765_102023656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	539	Open in IMG/M
3300006354\|Ga0075021_11014613	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300006791\|Ga0066653_10333410	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	766	Open in IMG/M
3300006797\|Ga0066659_10119541	All Organisms → cellular organisms → Bacteria → Proteobacteria	1825	Open in IMG/M
3300007255\|Ga0099791_10671540	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300009523\|Ga0116221_1265241	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	742	Open in IMG/M
3300009524\|Ga0116225_1306234	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	709	Open in IMG/M
3300009792\|Ga0126374_11004452	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	655	Open in IMG/M
3300010043\|Ga0126380_11495931	Not Available	598	Open in IMG/M
3300010154\|Ga0127503_11059799	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300010359\|Ga0126376_10958622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	852	Open in IMG/M
3300010359\|Ga0126376_11106034	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	801	Open in IMG/M
3300010359\|Ga0126376_11757556	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	657	Open in IMG/M
3300010376\|Ga0126381_101446397	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	993	Open in IMG/M
3300010376\|Ga0126381_103376888	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629	Open in IMG/M
3300010376\|Ga0126381_103922800	Not Available	580	Open in IMG/M
3300010398\|Ga0126383_10648102	All Organisms → cellular organisms → Bacteria → Acidobacteria	1131	Open in IMG/M
3300010398\|Ga0126383_11940756	Not Available	677	Open in IMG/M
3300010398\|Ga0126383_12024998	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	663	Open in IMG/M
3300010398\|Ga0126383_12324413	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622	Open in IMG/M
3300010857\|Ga0126354_1002897	All Organisms → cellular organisms → Bacteria → Proteobacteria	642	Open in IMG/M
3300011120\|Ga0150983_10567546	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300011120\|Ga0150983_10645675	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	831	Open in IMG/M
3300011120\|Ga0150983_13536658	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300011120\|Ga0150983_14046282	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	801	Open in IMG/M
3300011120\|Ga0150983_14740142	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	694	Open in IMG/M
3300011269\|Ga0137392_10170249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1769	Open in IMG/M
3300012089\|Ga0153924_1096634	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300012096\|Ga0137389_11208066	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	648	Open in IMG/M
3300012189\|Ga0137388_10345137	All Organisms → cellular organisms → Bacteria	1372	Open in IMG/M
3300012189\|Ga0137388_10669073	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	964	Open in IMG/M
3300012189\|Ga0137388_10942916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas stutzeri group → Pseudomonas stutzeri subgroup → Pseudomonas stutzeri	797	Open in IMG/M
3300012202\|Ga0137363_10328780	All Organisms → cellular organisms → Bacteria → Proteobacteria	1261	Open in IMG/M
3300012205\|Ga0137362_10991746	Not Available	715	Open in IMG/M
3300012205\|Ga0137362_11053513	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	692	Open in IMG/M
3300012206\|Ga0137380_10439128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1155	Open in IMG/M
3300012206\|Ga0137380_11260391	Not Available	624	Open in IMG/M
3300012357\|Ga0137384_11387284	Not Available	551	Open in IMG/M
3300012362\|Ga0137361_10051310	All Organisms → cellular organisms → Bacteria	3403	Open in IMG/M
3300012927\|Ga0137416_10825337	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	821	Open in IMG/M
3300012930\|Ga0137407_10592997	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1039	Open in IMG/M
3300012971\|Ga0126369_10867704	All Organisms → cellular organisms → Bacteria → Proteobacteria	987	Open in IMG/M
3300012984\|Ga0164309_11413501	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300014200\|Ga0181526_10573049	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	713	Open in IMG/M
3300015371\|Ga0132258_11207348	All Organisms → cellular organisms → Bacteria	1912	Open in IMG/M
3300016270\|Ga0182036_11298910	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300016319\|Ga0182033_10213929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1542	Open in IMG/M
3300016357\|Ga0182032_10848471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	774	Open in IMG/M
3300016371\|Ga0182034_10296668	All Organisms → cellular organisms → Bacteria	1294	Open in IMG/M
3300016387\|Ga0182040_11769358	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300016445\|Ga0182038_12126007	Not Available	509	Open in IMG/M
3300016730\|Ga0181515_1386314	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300017975\|Ga0187782_10979853	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	657	Open in IMG/M
3300018042\|Ga0187871_10431507	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	728	Open in IMG/M
3300018062\|Ga0187784_11233108	Not Available	593	Open in IMG/M
3300018085\|Ga0187772_11505548	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300018468\|Ga0066662_10316739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1321	Open in IMG/M
3300020580\|Ga0210403_10245598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1468	Open in IMG/M
3300021168\|Ga0210406_11176256	Not Available	560	Open in IMG/M
3300021168\|Ga0210406_11380589	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300021178\|Ga0210408_10723154	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300021178\|Ga0210408_10749247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium plurifarium	767	Open in IMG/M
3300021377\|Ga0213874_10041313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1381	Open in IMG/M
3300021377\|Ga0213874_10186978	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	739	Open in IMG/M
3300021406\|Ga0210386_10682162	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300021474\|Ga0210390_11377417	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300021476\|Ga0187846_10329587	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300021478\|Ga0210402_10407085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1263	Open in IMG/M
3300021559\|Ga0210409_11390328	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300022499\|Ga0242641_1012666	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	777	Open in IMG/M
3300022504\|Ga0242642_1028630	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	795	Open in IMG/M
3300022504\|Ga0242642_1037806	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	719	Open in IMG/M
3300022508\|Ga0222728_1034797	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	795	Open in IMG/M
3300022510\|Ga0242652_1023784	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	671	Open in IMG/M
3300022522\|Ga0242659_1020791	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1008	Open in IMG/M
3300022525\|Ga0242656_1047115	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	738	Open in IMG/M
3300022528\|Ga0242669_1026091	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	884	Open in IMG/M
3300022531\|Ga0242660_1110923	Not Available	682	Open in IMG/M
3300022532\|Ga0242655_10081346	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	859	Open in IMG/M
3300022716\|Ga0242673_1016553	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1002	Open in IMG/M
3300022716\|Ga0242673_1027376	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	854	Open in IMG/M
3300022716\|Ga0242673_1129304	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300022718\|Ga0242675_1052566	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	686	Open in IMG/M
3300022720\|Ga0242672_1014528	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1011	Open in IMG/M
3300022720\|Ga0242672_1080429	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300022726\|Ga0242654_10331099	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300026329\|Ga0209375_1195408	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	777	Open in IMG/M
3300026489\|Ga0257160_1011662	All Organisms → cellular organisms → Bacteria → Acidobacteria	1275	Open in IMG/M
3300026498\|Ga0257156_1031084	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1081	Open in IMG/M
3300027633\|Ga0208988_1173428	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300027635\|Ga0209625_1015504	Not Available	1679	Open in IMG/M
3300027729\|Ga0209248_10102209	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	864	Open in IMG/M
3300030629\|Ga0210268_1154948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	695	Open in IMG/M
3300030743\|Ga0265461_10929813	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	844	Open in IMG/M
3300030963\|Ga0265768_116163	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300031469\|Ga0170819_12162880	All Organisms → cellular organisms → Bacteria	1046	Open in IMG/M
3300031474\|Ga0170818_110264794	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300031573\|Ga0310915_10790639	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300031668\|Ga0318542_10643133	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300031715\|Ga0307476_11441537	Not Available	500	Open in IMG/M
3300031753\|Ga0307477_11018144	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300031890\|Ga0306925_10067544	All Organisms → cellular organisms → Bacteria → Proteobacteria	3757	Open in IMG/M
3300031910\|Ga0306923_10448039	Not Available	1465	Open in IMG/M
3300031910\|Ga0306923_11796245	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300031945\|Ga0310913_10638744	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	754	Open in IMG/M
3300031946\|Ga0310910_10299073	All Organisms → cellular organisms → Bacteria	1266	Open in IMG/M
3300031947\|Ga0310909_11073518	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	655	Open in IMG/M
3300031954\|Ga0306926_10127361	All Organisms → cellular organisms → Bacteria → Proteobacteria	3144	Open in IMG/M
3300031954\|Ga0306926_10918777	All Organisms → cellular organisms → Bacteria → Acidobacteria	1047	Open in IMG/M
3300031959\|Ga0318530_10366054	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300032001\|Ga0306922_10054652	All Organisms → cellular organisms → Bacteria → Proteobacteria	4139	Open in IMG/M
3300032001\|Ga0306922_10904023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	917	Open in IMG/M
3300032025\|Ga0318507_10334746	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300032059\|Ga0318533_10538662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	856	Open in IMG/M
3300032076\|Ga0306924_12307156	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300032090\|Ga0318518_10535816	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	599	Open in IMG/M
3300032121\|Ga0316040_114351	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300032160\|Ga0311301_11516897	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	824	Open in IMG/M
3300032205\|Ga0307472_101346564	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	690	Open in IMG/M
3300032261\|Ga0306920_100140061	All Organisms → cellular organisms → Bacteria → Proteobacteria	3601	Open in IMG/M
3300032261\|Ga0306920_101262988	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1064	Open in IMG/M
3300032261\|Ga0306920_101303355	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1045	Open in IMG/M
3300032261\|Ga0306920_104167536	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300033290\|Ga0318519_10962504	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.06%
Host-Associated	Host-Associated	2.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.71%
Aquatic	Environmental → Aquatic	7.35%
Plants	Host-Associated → Plants	2.21%
Fungi	Host-Associated → Fungi	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.97%
Freshwater	Environmental → Aquatic → Freshwater	3.68%
Sediment	Environmental → Aquatic → Sediment	3.68%
Roots	Host-Associated → Plants → Roots	1.47%
Cave	Environmental → Terrestrial → Cave	0.74%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.74%
Mycelium	Host-Associated → Fungi → Mycelium	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.21%
Loam	Environmental → Terrestrial → Soil → Loam	9.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.68%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.94%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.21%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.47%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.74%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.74%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	46.32%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.82%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.15%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.68%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.94%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.21%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.47%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.74%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.74%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	29.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.24%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.03%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.15%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.21%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.21%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.21%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.21%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.21%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.47%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.47%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.47%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	1.47%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.74%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.74%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.74%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.74%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.74%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.74%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.74%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.74%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459004	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm (2)	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010857	Boreal forest soil eukaryotic communities from Alaska, USA - W1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012089	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ008 MetaG	Host-Associated	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300016730	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022499	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022504	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022508	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022510	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022522	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022716	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022718	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022720	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026489	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-A	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300027633	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300030629	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO153-ARE093SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300030963	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032121	Soil microbial communities from Bohemian Forest, Czech Republic ? CSA3 metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.26
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.26
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F057591

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E4B_01582170	2170459004	Grass Soil	HWGISEAEASKPQRAIHFNAMQPWFVARDGSVHDAMFG
Ga0066683_100687771	3300005172	Soil	KNWGITDVASQKTARAIHINAIQPWKVDRDGSVHDAMFS*
Ga0070713_1014002243	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	QLSRAELYKHWGVPEADLGKPVRTTHFNAIQPWRVTRDGSLLDAMYA*
Ga0066699_112475402	3300005561	Soil	QPSRAELYKNWGISEAELKKPARSIHTNMMQPWRVAGDGSVHDAMFS*
Ga0066903_1004860623	3300005764	Tropical Forest Soil	LYKHWGISDEEAKKPARAIHFNAMQPWRIARDGSIHDAMFA*
Ga0066903_1065310352	3300005764	Tropical Forest Soil	SRAELYAFWGISEEEAKKPARAIHFNAMQPWRVARDGSVLDAMYA*
Ga0066903_1089708472	3300005764	Tropical Forest Soil	ELYKNWGIPDAKKVVRGQHYNAMQPWKVARDGSVSNAMFS*
Ga0075024_1007082922	3300006047	Watersheds	NWGIAETDKPARAIHFNGMQPWRVARDGSLHDAMFS*
Ga0075029_1012719932	3300006052	Watersheds	KNWGITELEKPSRTTHFNAIQPWFVARDGSVHDAMFS*
Ga0075014_1001364512	3300006174	Watersheds	YKNWGITELEKPSRTTHFNAMQPWSVARDGSVHDAMFS*
Ga0075014_1003012622	3300006174	Watersheds	LYKNWGIAETDKPARAIHFNAMQPWRVARDGSVYDAMFT*
Ga0070765_1009949121	3300006176	Soil	KGEVQPTRAELYKNWGIAETDKPARAIHFTGMQPWRVARDGSLHDAMFT*
Ga0070765_1020236561	3300006176	Soil	KNWGFSDQEAKKLNRGQHYNAMQPWKVARDGSVHNAMFS*
Ga0075021_110146131	3300006354	Watersheds	WGIAETDKPARAIHFNGMQPWRVARDGSLHDAMFS*
Ga0066653_103334101	3300006791	Soil	ELYKNWGIPDEDLNKAVRVIHFTAIQPWRVARDGSLHDAMFS*
Ga0066659_101195413	3300006797	Soil	AELNRNWGITDADQQKTSRAIHINAIQPRRVARDGSVHDAMFS*
Ga0099791_106715402	3300007255	Vadose Zone Soil	NRNWGITDMAAQKTSRAIHINAIQPWRVDRDGSVHDAMFS*
Ga0116221_12652411	3300009523	Peatlands Soil	DITAEEAKKPTRVINYNAIQPWSVARDGSVHDATFTA*
Ga0116225_13062342	3300009524	Peatlands Soil	WDITAEEAKKPTRVINYNAIQPWSVARDGSVHDATFTA*
Ga0126374_110044521	3300009792	Tropical Forest Soil	ELFKNWGFSEEESKKPQRSIHTNMMQPWKVARDGSITDAMFS*
Ga0126380_114959312	3300010043	Tropical Forest Soil	KSWGITNLEKPSRSTHFNAIQPWKVARDGSVHDVMFS*
Ga0127503_110597991	3300010154	Soil	ITGEEAKKPNRAIHFNAMQPWRVARDGSVHDAMFS*
Ga0126376_109586222	3300010359	Tropical Forest Soil	TGEAAQKPARTTHFNAIQPWKVTRDGSLQDAMYA*
Ga0126376_111060341	3300010359	Tropical Forest Soil	NWGFTEEESKKPQRSIHSNMQQPWRVAKDGSITDAMFS*
Ga0126376_117575561	3300010359	Tropical Forest Soil	LGEVQPSRAELFKNWGFSEEESKKPQRSIHTNCMQPWRVARDGSITDAMFS*
Ga0126381_1014463971	3300010376	Tropical Forest Soil	ELYKNWGITGEEAKKAVRTTHFNAMQPWKVAADGSVSNAMFS*
Ga0126381_1033768882	3300010376	Tropical Forest Soil	VQPSRAELYKNWGIPDTGKPARAIHFNAMQPWRVARDGSLHDAMFS*
Ga0126381_1039228001	3300010376	Tropical Forest Soil	QPSRAELYKYWGISEADSKKPARAIHMNAQQPWRVARDGTIDDVMFS*
Ga0126383_106481021	3300010398	Tropical Forest Soil	LYKNWGISEEESKKPARAIHMNAQQPWRVARDGSIHDAMFS*
Ga0126383_119407562	3300010398	Tropical Forest Soil	AELYRNWGITDLEKPSRTTHFNAIQPWKVARDGSVRDAMFS*
Ga0126383_120249981	3300010398	Tropical Forest Soil	GFSEEESKKPQRSIHSNMQQPWRVARDGSVYDAMFT*
Ga0126383_123244132	3300010398	Tropical Forest Soil	GIPDAKKVVRGQHYNAMQPWKVARDGSVSNAMFS*
Ga0126354_10028972	3300010857	Boreal Forest Soil	ELFKHWGIADVDKPARAIHFNAMQPWKVARDGSVHDAMFS*
Ga0150983_105675461	3300011120	Forest Soil	ITGEDAKKPNRAIHFNAMQPWRVARDGSVHDAMFT*
Ga0150983_106456751	3300011120	Forest Soil	ELYKDWGITGEEAKKAVRTTHFNAMQPWKVARDGSVSNAMFS*
Ga0150983_135366581	3300011120	Forest Soil	GEEAQKPNRAIHFNAMQPWSVARDGSVHDAMFAS*
Ga0150983_140462821	3300011120	Forest Soil	RDWGVTGEEAKKPVRASHYNAMQPWKVARDGSLHNAMFS*
Ga0150983_147401421	3300011120	Forest Soil	RAELYKNWGITAEDAQKAPRTSHINAMQPWRVARDGSLHDAMFS*
Ga0137392_101702493	3300011269	Vadose Zone Soil	LIYSKVDPGITGADHSQKTSRAIHINAIQPWRVDRDGSVHDAMFS*
Ga0153924_10966342	3300012089	Attine Ant Fungus Gardens	GISEAEAQKPARAIHFNAMQPWRVARDGSVHDAMFT*
Ga0137389_112080662	3300012096	Vadose Zone Soil	PSRAELYKNWGIAETDKPARAIHFNGMQPWRVARDGSLHDAMFS*
Ga0137388_103451374	3300012189	Vadose Zone Soil	YRNWGISEEESTRPSRAIHFNATQPWRVARDGSTHDAMFA*
Ga0137388_106690733	3300012189	Vadose Zone Soil	EKGVVQPSRAELYKNWGIAETDKPARAIHFNGMQPWRVARDGSLHDAMFS*
Ga0137388_109429162	3300012189	Vadose Zone Soil	LYKHWGITELEKPSRTTHFNAIQPWFVARDGSVHDAMFA*
Ga0137363_103287802	3300012202	Vadose Zone Soil	FKNWGISEEDSKKPQRSIHTNAMQPWRVASDGSVHNAMFS*
Ga0137362_109917461	3300012205	Vadose Zone Soil	HWGITELEKPSRTTHFNAIQPWFVARDGSVHDAMFA*
Ga0137362_110535131	3300012205	Vadose Zone Soil	SHWGIAGEEAQKPNRAIHFNAMQPWSVARDGSVHDAMFIS*
Ga0137380_104391281	3300012206	Vadose Zone Soil	GITDLQKPSRTTHFNAIQPWKVARDGSVHDAMFA*
Ga0137380_112603913	3300012206	Vadose Zone Soil	GITDLQKPSRTTHFNAIQPWKVARDGSVHDVMFS*
Ga0137384_113872842	3300012357	Vadose Zone Soil	SRAELYSHWGITGEEAQKPNRAIHFNAMQPWRVARDGSVHDAMFA*
Ga0137361_100513101	3300012362	Vadose Zone Soil	MFKNWGISEEDSKKPQRSIHTNAQQPWRVARDGSITDAMFS*
Ga0137416_108253371	3300012927	Vadose Zone Soil	LFKNWGIAEEESKKPTRAIHFNAMQPWRVARDGSVHDAMFS*
Ga0137407_105929971	3300012930	Vadose Zone Soil	ITGEEANKPARAIHTNMIQPWKVARDGSVHNAMYS*
Ga0126369_108677043	3300012971	Tropical Forest Soil	WGFSEADSKKPQRSIHTNCMQPWKVARDGSITDAMFS*
Ga0164309_114135011	3300012984	Soil	SIAELYKNWGIPDAKKVVRGQHYNAMQPWKVARDGSVSNAMFS*
Ga0181526_105730491	3300014200	Bog	RAELYSHWGITDEEAKKPSRAIHFNAMQPWFVARDGSVHDAMFA*
Ga0132258_112073481	3300015371	Arabidopsis Rhizosphere	LYNHWGITDEEAKKPARAIHFNAMQPWRIARDGSIHDAVFA*
Ga0182036_112989102	3300016270	Soil	ISEEESKKPSRAIHFNAQQPWKVARDGSVHDAMFS
Ga0182033_102139293	3300016319	Soil	HWGITGEEAKKPNRAIHFNAMQPWRIARDGSIHDAMFA
Ga0182032_108484712	3300016357	Soil	LYDHWGITGEAAQKPARTTHFNAIQPWKVTRDGSLQDAMYG
Ga0182034_102966681	3300016371	Soil	RGEVQPSRAELYKHWGITGEEAKKPNRAIHFNAMQPWRIARDGSIHDAMFA
Ga0182040_117693581	3300016387	Soil	LYKNWGIPDAKKVVRGQHYNAMQPWKVARDGSVSNAMFS
Ga0182038_121260071	3300016445	Soil	FWGISEEEAKKPARAIHFNAMQPWRVARDGSVLDAMYA
Ga0181515_13863141	3300016730	Peatland	AELYKDWGISDEEMKKPARSIHTNMQQPWRVARDGSIHDAMFS
Ga0187782_109798532	3300017975	Tropical Peatland	VQPSRAELYAHWGVTGEEAKKPIRSIHSNMMQPWRIASDGSIHDAMFG
Ga0187871_104315072	3300018042	Peatland	GITGEEAKKPNRAIHFNAMQPWRVARDGSVHDAMFA
Ga0187784_112331081	3300018062	Tropical Peatland	PSRAELYKNWGIPAEDLKKPVRTTHFNAIQPWQVASDGSVQDAMFSWSPPA
Ga0187772_115055481	3300018085	Tropical Peatland	LDDVQPSRAELYAHWDVSEEELKKPIRSIHSNMMQPWRIASDGSVHDAMFS
Ga0066662_103167393	3300018468	Grasslands Soil	VTLGRWVDAKAEVQPMRAEQDKNWGIADTDKPARGIHFIVMQPWRVARDGSLHDAMFA
Ga0210403_102455981	3300020580	Soil	WGIAEADKPARAIHFNAMQPWRVARDGSLHDAMFS
Ga0210406_111762561	3300021168	Soil	ELYEHWGIPAAERQKAVRTTHFNAIQPWRVASDGTLHDAMFPA
Ga0210406_113805891	3300021168	Soil	SRAELYEHWGITDDPEKPHRTTHFNAIQPWRVARDGSLHDAMFA
Ga0210408_107231541	3300021178	Soil	TDDRGEVQPSVAELYKNWGITGEEAKKPVRSSHFNAMQPWRVARDGSIHDAMFS
Ga0210408_107492473	3300021178	Soil	RHWGMTDLEHPARTTHFNAIQPWKVARDGTISDAMFAA
Ga0213874_100413133	3300021377	Plant Roots	VQPSRAELYKNWGIPDAGKPARAIHFNAMQPWRVARDGSLHDAMFS
Ga0213874_101869781	3300021377	Plant Roots	CEVQPSRAELFKNWGFSDEASKKPQRSIHTNCMQPWKIARDGSISDGMFS
Ga0210386_106821622	3300021406	Soil	ISEAEAQKPARAIHFNAMQPWRVARDGSIQDAMFT
Ga0210390_113774172	3300021474	Soil	HWGITGEDAKKPNRAIHFNAMQPWRVARDGSVHDAMFA
Ga0187846_103295872	3300021476	Biofilm	SRAELFKNWGFSEEELKKPQRSIHTNCMQPWRVARDGSITDAMFS
Ga0210402_104070851	3300021478	Soil	TRAELYKNWGITEADKPARAIHFNAMQPWRVARDGSVHDAMFA
Ga0210409_113903281	3300021559	Soil	AELYKNWGIAETDKPARAIHFNGMQPWRVARDGSLHDAMFS
Ga0242641_10126662	3300022499	Soil	RVAELYKDCGSTDEEAKKAVRTTHVNAMQPWKVARDGSVSNAMFS
Ga0242642_10286302	3300022504	Soil	LYKNWGITGEKAKKAARTSHFNAMQPWRVARDGSVYDAMFT
Ga0242642_10378062	3300022504	Soil	GVTGEEAKKPVRASHYNAMQPWKVARDGSLHNAMFS
Ga0222728_10347972	3300022508	Soil	EHWGITGEEAKKPNRAIHFNAMQPWRVARDGSVQDAMFS
Ga0242652_10237841	3300022510	Soil	WGIGDEEAKKPARAIHFNAMQPWSVARDGSVHDAMFTS
Ga0242659_10207912	3300022522	Soil	YDHWGITGEEAKHPARAIHFNAMQPWRVARDGSVQDAMFS
Ga0242656_10471151	3300022525	Soil	GITDNPEKPHRTTHFNAIQPWRVARDGSLHDAMFTFSS
Ga0242669_10260912	3300022528	Soil	AELYSHWGITGAEAQKPNRAIHFNAMQPWSVARDGSVHDAMFTA
Ga0242660_11109232	3300022531	Soil	GDGQPSRAELYNHWGITGEEAKKPNRAIHFNAMQPWRVARDGSIHDAMFA
Ga0242655_100813461	3300022532	Soil	QPSRAALYGHWGVTDIDPQKPPRAIHFNAMQPWRVARDGSLHDAMFTFSS
Ga0242673_10165531	3300022716	Soil	RAELYDHWGISSAEAQKPARAIHFNAMQPWRVARDGSVHDAMFA
Ga0242673_10273762	3300022716	Soil	VTGEDAKRPFRASHYNAMQPWKVARDGSLHNAMFS
Ga0242673_11293042	3300022716	Soil	DHWGITGPEALKANRAIHFNAMQPWFVARDGSVHDAMFA
Ga0242675_10525662	3300022718	Soil	IGDEEAKKPARAIHFNAMQPWRVTRDGSVHDAMFA
Ga0242672_10145281	3300022720	Soil	ITGPEALKANRAIHFNAMQPWRVARDGSVQDAMFS
Ga0242672_10804291	3300022720	Soil	LYSHWGISEAEASKPQRAIHFNAMQPRFVARDGSVHDAMFG
Ga0242654_103310991	3300022726	Soil	DQGDVQPSRAVLYGHWGVTDVDPQKPPRAIHFNAMQPWRVARDGSLHDAMFTFSS
Ga0209375_11954081	3300026329	Soil	LYKNWGITDVASQKTARAIHINAIQPWKVDRDGSVHDAMFS
Ga0257160_10116621	3300026489	Soil	RAELYKNWGISEEDSKKPARAIHFNAMQPWRVARDGSIHDVMFS
Ga0257156_10310843	3300026498	Soil	TDELGEVQPSRAELFKNWGFSDEESKKPQRSIHTNAMQPWRVARDGSITDAMFS
Ga0208988_11734281	3300027633	Forest Soil	KHWGIADLEKPARAIHFNAMQPWKVARDGSIQDAMFSLAS
Ga0209625_10155041	3300027635	Forest Soil	RAELYSHWGISEEESKKPARAIHFNAMQPWRVARDGNVHDAMYS
Ga0209248_101022092	3300027729	Bog Forest Soil	VQPSRLELFNHWGITGEEANKPNRAIHFNAMQPWRVARDGSIHDAMFA
Ga0210268_11549481	3300030629	Soil	AELYNHWGITDDAKPARAIHFNAMQPWRIARDGSIHDAMFSTFS
Ga0265461_109298134	3300030743	Soil	EHWGITDNPEKPHRTTHFNAIQPWRVARDGSLHDAMFA
Ga0265768_1161631	3300030963	Soil	GITGEEAQKPARTTHFNAMQPWRVARDGSVHDAMFA
Ga0170819_121628802	3300031469	Forest Soil	EHWGITGEEAKKPNRAIHFNAMQPWRVARDGSVHDAMFA
Ga0170818_1102647941	3300031474	Forest Soil	HWGITGEEAKKPNRAIHFNAMQPWRVARDGSVHDAMFS
Ga0310915_107906393	3300031573	Soil	TTDERGEVQPSRAELYKHWGISDEEAKKPARAIHFNAMQPWRIARDGSIHDAMFA
Ga0318542_106431331	3300031668	Soil	DELGEVQPSRAELFKNWGFTEEQSKKPQRSIHTNCMQPWRVARDGSIHDAMFS
Ga0307476_114415371	3300031715	Hardwood Forest Soil	SRAELYKNWGISEADSKKPARAIHMNAQQPWKVARDGSIDDVMFS
Ga0307477_110181441	3300031753	Hardwood Forest Soil	AELYEHWGITGEEAKKPARAIHFNAMQPWGVARDGSVHDAMFS
Ga0306925_100675444	3300031890	Soil	VQPSRAELYKHWGISDEEAKKPARAIHFNAMQPWRIARDGSIHDAMFA
Ga0306923_104480392	3300031910	Soil	MNRGLTAEEAEKPNRAIHFNAMQPWRVARDGTVHDAMFS
Ga0306923_117962451	3300031910	Soil	YKDWGVTGGEAKKAIRTTHFNAMQPWKVASDGSVSNAMFS
Ga0310913_106387441	3300031945	Soil	ELYKDWGIPDAKKVVRGQHYNAMQPWKVARDGSVSNAMFS
Ga0310910_102990731	3300031946	Soil	KHWGISDEEAKKPARAIHFNAMQPWRIARDGSIHDAMFA
Ga0310909_110735182	3300031947	Soil	KNWGISDEEAKKPVRGQHYNAMQPWKVARDGSISNAMFS
Ga0306926_101273613	3300031954	Soil	VQPSRAELYKHWGITGEEAKKPNRAIHFNAMQPWRIARDGSIHDAMFA
Ga0306926_109187771	3300031954	Soil	LYRNWGFSEEESLKPNRAIHFNAMQPWRVARDGSVHDAMYS
Ga0318530_103660542	3300031959	Soil	LYKHWGITGEEAKKPNRAIHFNAMQPWRVARDGSVHDAMFS
Ga0306922_100546521	3300032001	Soil	LYKHWGISDEEAKKPARAIHFNAMQPWRIARDGSIHDAMFA
Ga0306922_109040233	3300032001	Soil	TLAELHQNWGITDSASQKTARAIHINAIQPWRITRDGSVLDAMFS
Ga0318507_103347461	3300032025	Soil	YKHWGITGEEAKKPNRAIHFNAMQPWRVARDGSVHDAMFS
Ga0318533_105386621	3300032059	Soil	WGITGEAAQKPARTTHFNAIQPWKVTRDGSLQDAMYG
Ga0306924_123071561	3300032076	Soil	GFSEEELKKPQRSIHTNCQQPWKIARDGSIHDAMFVA
Ga0318518_105358162	3300032090	Soil	GEVQPSRAELFKNWGFTEEQSKKPQRSIHTNCMQPWRVARDGSIHDAMFS
Ga0316040_1143511	3300032121	Soil	DVQPSRAELYDHWAITGEEAKHPARAIHVNARQPWRVARDGSVQDAMFS
Ga0311301_115168971	3300032160	Peatlands Soil	QPSRAELYKNWGITDDVEKPHRTTHFNAMQPWRVARDGSIHDAMFS
Ga0307472_1013465642	3300032205	Hardwood Forest Soil	EDEKGVVQPSRAELYKNWGIAEADKPARAIHFNGMQPWRVARDGSLHDAMFS
Ga0306920_1001400613	3300032261	Soil	RAELYKHWGITGEEAKKPNRAIHFNAMQPWRIARDGSIHDAMFA
Ga0306920_1012629883	3300032261	Soil	LYKNWGISEEDSKKPARSIHTNMMQPWKVARDGSVHDAMFS
Ga0306920_1013033553	3300032261	Soil	EVQPSRAELYNHWGITGEEAKKPNRAIHFNAMQPWRIARDGSIHDAMFA
Ga0306920_1041675361	3300032261	Soil	VQPTRAELFKNWGFSEEELKKPQRSIHTNCQQPWKIARDGSIHDAMFVA
Ga0318519_109625041	3300033290	Soil	YKNWGIAEAQKPARAIHFNAMQPWKIASDGSVHDAMFS

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign